CONSTRUCT { _:597509 up:source unirule:MF_01640 . _:597510 up:source unirule:MF_01640 . _:597511 up:source unirule:MF_01640 . _:597512 up:source unirule:MF_01640 . _:597513 up:source unirule:MF_01640 . _:597514 up:source unirule:MF_01640 . _:597515 up:source unirule:MF_01640 . _:597516 up:source unirule:MF_01640 . _:597517 up:source unirule:MF_01640 . _:597518 up:source unirule:MF_01640 . _:597519 up:source unirule:MF_01640 . _:597520 up:source unirule:MF_01640 . _:597521 up:source unirule:MF_01640 . _:597522 up:source unirule:MF_01640 . _:597523 up:source unirule:MF_01640 . _:597524 up:source unirule:MF_01640 . _:597525 up:source unirule:MF_01640 . _:597526 up:source unirule:MF_01640 . _:597527 up:source unirule:MF_01640 . _:597528 up:source unirule:MF_01640 . _:597529 up:source unirule:MF_01640 . _:597530 up:source unirule:MF_01640 . _:597531 up:source unirule:MF_01640 . _:597532 up:source unirule:MF_01640 . _:597533 up:source unirule:MF_01640 . ?this up:annotation ?annotation2 , ?annotation3 , ?annotation5 , ?annotation6 , ?annotation7 , ?annotation9 ; up:classifiedWith GO:0005737 , GO:0008615 , GO:0042823 , GO:0048001 , keyword:520 , keyword:560 , keyword:664 , keyword:963 ; up:recommendedName ?name0 . ?name0 up:ecName '1.2.1.72' ; up:fullName 'D-erythrose-4-phosphate dehydrogenase' ; up:shortName 'E4PDH' ; rdf:type up:Structured_Name . ?gene1 skos:prefLabel 'epd' . ?annotation2 a up:Function_Annotation ; rdfs:comment 'Catalyzes the NAD-dependent conversion of D-erythrose 4-phosphate to 4-phosphoerythronate.' . ?annotation3 up:activity ?activity4 ; rdf:type up:Catalytic_Activity_Annotation . ?activity4 up:catalyticActivity <http://rdf.rhea-db.org/12056>; up:enzymeClass <http://purl.uniprot.org/enzyme/1.2.1.72>. ?annotation5 a up:Pathway_Annotation ; rdfs:comment "Cofactor biosynthesis; pyridoxine 5'-phosphate biosynthesis; pyridoxine 5'-phosphate from D-erythrose 4-phosphate: step 1/5." . ?annotation6 a up:Subunit_Annotation ; rdfs:comment 'Homotetramer.' . ?annotation7 a up:Subcellular_Location_Annotation . ?annotation7li8 up:cellularComponent <http://purl.uniprot.org/locations/null>. ?annotation9 a up:Similarity_Annotation ; rdfs:comment 'Belongs to the glyceraldehyde-3-phosphate dehydrogenase family. Epd subfamily.' . ?pfs10 up:annotation ?annotation11 . ?annotation11 faldo:begin ?pfsb12 ; faldo:end ?pfse13 ; up:ligand ?ligand14 ; rdf:type up:Binding_Site_Annotation . ?pfsb12 faldo:position ?thisPositionOn15 ; rdf:type faldo:ExactPosition . ?pfse13 faldo:position ?thisPositionOn16 ; rdf:type faldo:ExactPosition . ?ligand14 rdfs:subClassOf chebi:57540 . ?pfs17 up:annotation ?annotation18 . ?annotation18 faldo:begin ?pfsb19 ; faldo:end ?pfse20 ; up:ligand ?ligand21 ; rdf:type up:Binding_Site_Annotation . ?pfsb19 faldo:position ?thisPositionOn23 ; rdf:type faldo:ExactPosition . ?pfse20 faldo:position ?thisPositionOn24 ; rdf:type faldo:ExactPosition . ?ligand21 rdfs:subClassOf ?molecule22 . ?molecule22 rdfs:label 'substrate' . ?pfs25 up:annotation ?annotation26 . ?annotation26 faldo:begin ?pfsb27 ; faldo:end ?pfse28 ; up:ligand ?ligand29 ; rdf:type up:Binding_Site_Annotation . ?pfsb27 faldo:position ?thisPositionOn31 ; rdf:type faldo:ExactPosition . ?pfse28 faldo:position ?thisPositionOn32 ; rdf:type faldo:ExactPosition . ?ligand29 rdfs:subClassOf ?molecule30 . ?molecule30 rdfs:label 'substrate' . ?pfs33 up:annotation ?annotation34 . ?annotation34 faldo:begin ?pfsb35 ; faldo:end ?pfse36 ; rdf:type up:Active_Site_Annotation ; rdfs:comment 'Nucleophile' . ?pfsb35 faldo:position ?thisPositionOn37 ; rdf:type faldo:ExactPosition . ?pfse36 faldo:position ?thisPositionOn38 ; rdf:type faldo:ExactPosition . ?pfs39 up:annotation ?annotation40 . ?annotation40 faldo:begin ?pfsb41 ; faldo:end ?pfse42 ; up:ligand ?ligand43 ; rdf:type up:Binding_Site_Annotation . ?pfsb41 faldo:position ?thisPositionOn44 ; rdf:type faldo:ExactPosition . ?pfse42 faldo:position ?thisPositionOn45 ; rdf:type faldo:ExactPosition . ?ligand43 rdfs:subClassOf chebi:57540 . ?pfs46 up:annotation ?annotation47 . ?annotation47 faldo:begin ?pfsb48 ; faldo:end ?pfse49 ; up:ligand ?ligand50 ; rdf:type up:Binding_Site_Annotation . ?pfsb48 faldo:position ?thisPositionOn52 ; rdf:type faldo:ExactPosition . ?pfse49 faldo:position ?thisPositionOn53 ; rdf:type faldo:ExactPosition . ?ligand50 rdfs:subClassOf ?molecule51 . ?molecule51 rdfs:label 'substrate' . ?pfs54 up:annotation ?annotation55 . ?annotation55 faldo:begin ?pfsb56 ; faldo:end ?pfse57 ; up:ligand ?ligand58 ; rdf:type up:Binding_Site_Annotation . ?pfsb56 faldo:position ?thisPositionOn60 ; rdf:type faldo:ExactPosition . ?pfse57 faldo:position ?thisPositionOn61 ; rdf:type faldo:ExactPosition . ?ligand58 rdfs:subClassOf ?molecule59 . ?molecule59 rdfs:label 'substrate' . ?pfs62 up:annotation ?annotation63 . ?annotation63 faldo:begin ?pfsb64 ; faldo:end ?pfse65 ; up:ligand ?ligand66 ; rdf:type up:Binding_Site_Annotation . ?pfsb64 faldo:position ?thisPositionOn67 ; rdf:type faldo:ExactPosition . ?pfse65 faldo:position ?thisPositionOn68 ; rdf:type faldo:ExactPosition . ?ligand66 rdfs:subClassOf chebi:57540 . ?pfs69 up:annotation ?annotation70 . ?annotation70 faldo:begin ?pfsb71 ; faldo:end ?pfse72 ; rdf:type up:Site_Annotation ; rdfs:comment 'Activates thiol group during catalysis' . ?pfsb71 faldo:position ?thisPositionOn73 ; rdf:type faldo:ExactPosition . ?pfse72 faldo:position ?thisPositionOn74 ; rdf:type faldo:ExactPosition . _:597534 a rdf:Statement ; up:attribution _:597509 ; rdf:subject ?this ; rdf:predicate up:recommendedName ; rdf:object ?name0 . _:597535 a rdf:Statement ; up:attribution _:597510 ; rdf:subject ?gene1 ; rdf:predicate up:encodedBy ; rdf:object ?gene1 . _:597536 a rdf:Statement ; up:attribution _:597511 ; rdf:subject ?this ; rdf:predicate up:annotation ; rdf:object ?annotation2 . _:597537 a rdf:Statement ; up:attribution _:597512 ; rdf:subject ?this ; rdf:predicate up:annotation ; rdf:object ?annotation3 . _:597538 a rdf:Statement ; up:attribution _:597513 ; rdf:subject ?this ; rdf:predicate up:annotation ; rdf:object ?annotation5 . _:597539 a rdf:Statement ; up:attribution _:597514 ; rdf:subject ?this ; rdf:predicate up:annotation ; rdf:object ?annotation6 . _:597540 a rdf:Statement ; up:attribution _:597515 ; rdf:subject ?this ; rdf:predicate up:annotation ; rdf:object ?annotation7 . _:597541 a rdf:Statement ; up:attribution _:597516 ; rdf:subject ?this ; rdf:predicate up:annotation ; rdf:object ?annotation9 . _:597542 a rdf:Statement ; up:attribution _:597517 ; rdf:subject ?this ; rdf:predicate up:classifiedWith ; rdf:object keyword:963 . _:597543 a rdf:Statement ; up:attribution _:597518 ; rdf:subject ?this ; rdf:predicate up:classifiedWith ; rdf:object keyword:520 . _:597544 a rdf:Statement ; up:attribution _:597519 ; rdf:subject ?this ; rdf:predicate up:classifiedWith ; rdf:object keyword:560 . _:597545 a rdf:Statement ; up:attribution _:597520 ; rdf:subject ?this ; rdf:predicate up:classifiedWith ; rdf:object keyword:664 . _:597546 a rdf:Statement ; up:attribution _:597521 ; rdf:subject ?this ; rdf:predicate up:classifiedWith ; rdf:object GO:0048001 . _:597547 a rdf:Statement ; up:attribution _:597522 ; rdf:subject ?this ; rdf:predicate up:classifiedWith ; rdf:object GO:0042823 . _:597548 a rdf:Statement ; up:attribution _:597523 ; rdf:subject ?this ; rdf:predicate up:classifiedWith ; rdf:object GO:0008615 . _:597549 a rdf:Statement ; up:attribution _:597524 ; rdf:subject ?this ; rdf:predicate up:classifiedWith ; rdf:object GO:0005737 . _:597550 a rdf:Statement ; up:source unirule:MF_01640 ; rdf:subject ?pfs10 ; rdf:predicate up:annotation ; rdf:object ?annotation11 . _:597551 a rdf:Statement ; up:attribution _:597525 ; rdf:subject ?pfs10 ; rdf:predicate up:annotation ; rdf:object ?annotation11 . _:597552 a rdf:Statement ; up:source unirule:MF_01640 ; rdf:subject ?pfs17 ; rdf:predicate up:annotation ; rdf:object ?annotation18 . _:597553 a rdf:Statement ; up:attribution _:597526 ; rdf:subject ?pfs17 ; rdf:predicate up:annotation ; rdf:object ?annotation18 . _:597554 a rdf:Statement ; up:source unirule:MF_01640 ; rdf:subject ?pfs25 ; rdf:predicate up:annotation ; rdf:object ?annotation26 . _:597555 a rdf:Statement ; up:attribution _:597527 ; rdf:subject ?pfs25 ; rdf:predicate up:annotation ; rdf:object ?annotation26 . _:597556 a rdf:Statement ; up:source unirule:MF_01640 ; rdf:subject ?pfs33 ; rdf:predicate up:annotation ; rdf:object ?annotation34 . _:597557 a rdf:Statement ; up:attribution _:597528 ; rdf:subject ?pfs33 ; rdf:predicate up:annotation ; rdf:object ?annotation34 . _:597558 a rdf:Statement ; up:source unirule:MF_01640 ; rdf:subject ?pfs39 ; rdf:predicate up:annotation ; rdf:object ?annotation40 . _:597559 a rdf:Statement ; up:attribution _:597529 ; rdf:subject ?pfs39 ; rdf:predicate up:annotation ; rdf:object ?annotation40 . _:597560 a rdf:Statement ; up:source unirule:MF_01640 ; rdf:subject ?pfs46 ; rdf:predicate up:annotation ; rdf:object ?annotation47 . _:597561 a rdf:Statement ; up:attribution _:597530 ; rdf:subject ?pfs46 ; rdf:predicate up:annotation ; rdf:object ?annotation47 . _:597562 a rdf:Statement ; up:source unirule:MF_01640 ; rdf:subject ?pfs54 ; rdf:predicate up:annotation ; rdf:object ?annotation55 . _:597563 a rdf:Statement ; up:attribution _:597531 ; rdf:subject ?pfs54 ; rdf:predicate up:annotation ; rdf:object ?annotation55 . _:597564 a rdf:Statement ; up:source unirule:MF_01640 ; rdf:subject ?pfs62 ; rdf:predicate up:annotation ; rdf:object ?annotation63 . _:597565 a rdf:Statement ; up:attribution _:597532 ; rdf:subject ?pfs62 ; rdf:predicate up:annotation ; rdf:object ?annotation63 . _:597566 a rdf:Statement ; up:source unirule:MF_01640 ; rdf:subject ?pfs69 ; rdf:predicate up:annotation ; rdf:object ?annotation70 . _:597567 a rdf:Statement ; up:attribution _:597533 ; rdf:subject ?pfs69 ; rdf:predicate up:annotation ; rdf:object ?annotation70 . } WHERE { #baseURI: http://purl.uniprot.org/unirule/MF_01640 #Rule MF_01640 Created by:? on:2007-06-11 Modified by:Edouard de Castro on:2024-09-03 ?this up:organism ?thisOrganism ; rdfs:seeAlso signature:MF_01640 . ?thisOrganism rdfs:subClassOf+ taxon:1224 . BIND(URI(CONCAT(STR(?this), '#MF_01640a0')) AS ?name0) . BIND(URI(CONCAT(STR(?this), '#MF_01640a2')) AS ?annotation2) . BIND(URI(CONCAT(STR(?this), '#MF_01640a3')) AS ?annotation3) . BIND(URI(CONCAT(STR(?this), '#MF_01640a5')) AS ?annotation5) . BIND(URI(CONCAT(STR(?this), '#MF_01640a6')) AS ?annotation6) . BIND(URI(CONCAT(STR(?this), '#MF_01640a7')) AS ?annotation7) . BIND(URI(CONCAT(STR(?this), '#MF_01640a9')) AS ?annotation9) . OPTIONAL { ?this up:sequence ?thisSequence . ?thisSequence rdf:value ?thisSequenceValue . ?templateMotifMatch79 faldo:location ?templateMotifSequenceMatchRegionP0A9B680 ; edam:is_output_of ?templateMotifSequenceProfileAlignmentOperationP0A9B682 ; rdf:type edam:data_0869 ; rdf:value ?templateMotifCigarP0A9B6MF_0164075 . ?templateMotifSequenceMatchRegionP0A9B680 faldo:begin ?templateMotifSequenceMatchBeginP0A9B681 . ?templateMotifSequenceMatchBeginP0A9B681 faldo:position ?templateMotifSequenceMatchBeginPositionP0A9B676 ; faldo:reference isoform:P0A9B6-1 . ?templateMotifSequenceProfileAlignmentOperationP0A9B682 edam:has_input signature:MF_01640 ; rdf:type edam:operation_0300 . ?targetMotifMatch83 faldo:location ?targetMotifMatchRegionMatch84 ; edam:is_output_of ?targetMotifSequenceAlignmentOperationMF_0164086 ; rdf:type edam:data_0869 ; rdf:value ?targetMotifMatchCigarP0A9B6MF_0164077 . ?targetMotifMatchRegionMatch84 faldo:begin ?targetMotifMatchRegionMatchBeginMF_0164085 . ?targetMotifMatchRegionMatchBeginMF_0164085 faldo:position ?targetMotifMatchRegionMatchBeginPositionMF_0164078 ; faldo:reference ?thisSequence . ?targetMotifSequenceAlignmentOperationMF_0164086 edam:has_input signature:MF_01640 ; rdf:type edam:operation_0300 . BIND(STRLEN(REPLACE(SUBSTR(?templateMotifCigarP0A9B6MF_0164075, 1, (STRLEN(?templateMotifCigarP0A9B6MF_0164075) - STRLEN(REPLACE(?templateMotifCigarP0A9B6MF_0164075, CONCAT('^(?:-*[^-]){', STR(((12 - ?templateMotifSequenceMatchBeginPositionP0A9B676) + 1)), '}'), '')))), '[a-z]', '')) AS ?step187) . BIND((STRLEN(SUBSTR(?targetMotifMatchCigarP0A9B6MF_0164077, 1, (STRLEN(?targetMotifMatchCigarP0A9B6MF_0164077) - STRLEN(REPLACE(?targetMotifMatchCigarP0A9B6MF_0164077, CONCAT('^(?:[a-z]*(?:[A-Z]|-)){', STR(?step187), '}'), ''))))) - STRLEN(REPLACE(SUBSTR(?targetMotifMatchCigarP0A9B6MF_0164077, 1, (STRLEN(?targetMotifMatchCigarP0A9B6MF_0164077) - STRLEN(REPLACE(?targetMotifMatchCigarP0A9B6MF_0164077, CONCAT('^(?:[a-z]*(?:[A-Z]|-)){', STR(?step187), '}'), '')))), '[^-]', ''))) AS ?step288) . BIND(((?step288 + ?targetMotifMatchRegionMatchBeginPositionMF_0164078) - 1) AS ?thisPositionOn15) . BIND(STRLEN(REPLACE(SUBSTR(?templateMotifCigarP0A9B6MF_0164075, 1, (STRLEN(?templateMotifCigarP0A9B6MF_0164075) - STRLEN(REPLACE(?templateMotifCigarP0A9B6MF_0164075, CONCAT('^(?:-*[^-]){', STR(((13 - ?templateMotifSequenceMatchBeginPositionP0A9B676) + 1)), '}'), '')))), '[a-z]', '')) AS ?step189) . BIND((STRLEN(SUBSTR(?targetMotifMatchCigarP0A9B6MF_0164077, 1, (STRLEN(?targetMotifMatchCigarP0A9B6MF_0164077) - STRLEN(REPLACE(?targetMotifMatchCigarP0A9B6MF_0164077, CONCAT('^(?:[a-z]*(?:[A-Z]|-)){', STR(?step189), '}'), ''))))) - STRLEN(REPLACE(SUBSTR(?targetMotifMatchCigarP0A9B6MF_0164077, 1, (STRLEN(?targetMotifMatchCigarP0A9B6MF_0164077) - STRLEN(REPLACE(?targetMotifMatchCigarP0A9B6MF_0164077, CONCAT('^(?:[a-z]*(?:[A-Z]|-)){', STR(?step189), '}'), '')))), '[^-]', ''))) AS ?step290) . BIND(((?step290 + ?targetMotifMatchRegionMatchBeginPositionMF_0164078) - 1) AS ?thisPositionOn16) . BIND(?this AS ?pfs1t91) . BIND(URI(CONCAT(STR(?thisSequence), '#position', STR(?thisPositionOn15))) AS ?pfsb12) . BIND(URI(CONCAT(STR(?thisSequence), '#position', STR(?thisPositionOn16))) AS ?pfse13) . FILTER (REGEX('R[IV]', SUBSTR(?thisSequenceValue, ?thisPositionOn15, (?thisPositionOn16 - ?thisPositionOn15)))) . BIND(URI(CONCAT(STR(?this), '#MF_01640a11')) AS ?annotation11) . BIND(?this AS ?pfs10) . } OPTIONAL { ?this up:sequence ?thisSequence . ?thisSequence rdf:value ?thisSequenceValue . ?templateMotifMatch96 faldo:location ?templateMotifSequenceMatchRegionP0A9B697 ; edam:is_output_of ?templateMotifSequenceProfileAlignmentOperationP0A9B699 ; rdf:type edam:data_0869 ; rdf:value ?templateMotifCigarP0A9B6MF_0164092 . ?templateMotifSequenceMatchRegionP0A9B697 faldo:begin ?templateMotifSequenceMatchBeginP0A9B698 . ?templateMotifSequenceMatchBeginP0A9B698 faldo:position ?templateMotifSequenceMatchBeginPositionP0A9B693 ; faldo:reference isoform:P0A9B6-1 . ?templateMotifSequenceProfileAlignmentOperationP0A9B699 edam:has_input signature:MF_01640 ; rdf:type edam:operation_0300 . ?targetMotifMatch100 faldo:location ?targetMotifMatchRegionMatch101 ; edam:is_output_of ?targetMotifSequenceAlignmentOperationMF_01640103 ; rdf:type edam:data_0869 ; rdf:value ?targetMotifMatchCigarP0A9B6MF_0164094 . ?targetMotifMatchRegionMatch101 faldo:begin ?targetMotifMatchRegionMatchBeginMF_01640102 . ?targetMotifMatchRegionMatchBeginMF_01640102 faldo:position ?targetMotifMatchRegionMatchBeginPositionMF_0164095 ; faldo:reference ?thisSequence . ?targetMotifSequenceAlignmentOperationMF_01640103 edam:has_input signature:MF_01640 ; rdf:type edam:operation_0300 . BIND(STRLEN(REPLACE(SUBSTR(?templateMotifCigarP0A9B6MF_0164092, 1, (STRLEN(?templateMotifCigarP0A9B6MF_0164092) - STRLEN(REPLACE(?templateMotifCigarP0A9B6MF_0164092, CONCAT('^(?:-*[^-]){', STR(((154 - ?templateMotifSequenceMatchBeginPositionP0A9B693) + 1)), '}'), '')))), '[a-z]', '')) AS ?step1104) . BIND((STRLEN(SUBSTR(?targetMotifMatchCigarP0A9B6MF_0164094, 1, (STRLEN(?targetMotifMatchCigarP0A9B6MF_0164094) - STRLEN(REPLACE(?targetMotifMatchCigarP0A9B6MF_0164094, CONCAT('^(?:[a-z]*(?:[A-Z]|-)){', STR(?step1104), '}'), ''))))) - STRLEN(REPLACE(SUBSTR(?targetMotifMatchCigarP0A9B6MF_0164094, 1, (STRLEN(?targetMotifMatchCigarP0A9B6MF_0164094) - STRLEN(REPLACE(?targetMotifMatchCigarP0A9B6MF_0164094, CONCAT('^(?:[a-z]*(?:[A-Z]|-)){', STR(?step1104), '}'), '')))), '[^-]', ''))) AS ?step2105) . BIND(((?step2105 + ?targetMotifMatchRegionMatchBeginPositionMF_0164095) - 1) AS ?thisPositionOn23) . BIND(STRLEN(REPLACE(SUBSTR(?templateMotifCigarP0A9B6MF_0164092, 1, (STRLEN(?templateMotifCigarP0A9B6MF_0164092) - STRLEN(REPLACE(?templateMotifCigarP0A9B6MF_0164092, CONCAT('^(?:-*[^-]){', STR(((156 - ?templateMotifSequenceMatchBeginPositionP0A9B693) + 1)), '}'), '')))), '[a-z]', '')) AS ?step1106) . BIND((STRLEN(SUBSTR(?targetMotifMatchCigarP0A9B6MF_0164094, 1, (STRLEN(?targetMotifMatchCigarP0A9B6MF_0164094) - STRLEN(REPLACE(?targetMotifMatchCigarP0A9B6MF_0164094, CONCAT('^(?:[a-z]*(?:[A-Z]|-)){', STR(?step1106), '}'), ''))))) - STRLEN(REPLACE(SUBSTR(?targetMotifMatchCigarP0A9B6MF_0164094, 1, (STRLEN(?targetMotifMatchCigarP0A9B6MF_0164094) - STRLEN(REPLACE(?targetMotifMatchCigarP0A9B6MF_0164094, CONCAT('^(?:[a-z]*(?:[A-Z]|-)){', STR(?step1106), '}'), '')))), '[^-]', ''))) AS ?step2107) . BIND(((?step2107 + ?targetMotifMatchRegionMatchBeginPositionMF_0164095) - 1) AS ?thisPositionOn24) . BIND(?this AS ?pfs1t108) . BIND(URI(CONCAT(STR(?thisSequence), '#position', STR(?thisPositionOn23))) AS ?pfsb19) . BIND(URI(CONCAT(STR(?thisSequence), '#position', STR(?thisPositionOn24))) AS ?pfse20) . FILTER ((SUBSTR(?thisSequenceValue, ?thisPositionOn23, (?thisPositionOn24 - ?thisPositionOn23)) = 'SCT')) . BIND(URI(CONCAT(STR(?this), '#MF_01640a18')) AS ?annotation18) . BIND(?this AS ?pfs17) . } OPTIONAL { ?this up:sequence ?thisSequence . ?thisSequence rdf:value ?thisSequenceValue . ?templateMotifMatch113 faldo:location ?templateMotifSequenceMatchRegionP0A9B6114 ; edam:is_output_of ?templateMotifSequenceProfileAlignmentOperationP0A9B6116 ; rdf:type edam:data_0869 ; rdf:value ?templateMotifCigarP0A9B6MF_01640109 . ?templateMotifSequenceMatchRegionP0A9B6114 faldo:begin ?templateMotifSequenceMatchBeginP0A9B6115 . ?templateMotifSequenceMatchBeginP0A9B6115 faldo:position ?templateMotifSequenceMatchBeginPositionP0A9B6110 ; faldo:reference isoform:P0A9B6-1 . ?templateMotifSequenceProfileAlignmentOperationP0A9B6116 edam:has_input signature:MF_01640 ; rdf:type edam:operation_0300 . ?targetMotifMatch117 faldo:location ?targetMotifMatchRegionMatch118 ; edam:is_output_of ?targetMotifSequenceAlignmentOperationMF_01640120 ; rdf:type edam:data_0869 ; rdf:value ?targetMotifMatchCigarP0A9B6MF_01640111 . ?targetMotifMatchRegionMatch118 faldo:begin ?targetMotifMatchRegionMatchBeginMF_01640119 . ?targetMotifMatchRegionMatchBeginMF_01640119 faldo:position ?targetMotifMatchRegionMatchBeginPositionMF_01640112 ; faldo:reference ?thisSequence . ?targetMotifSequenceAlignmentOperationMF_01640120 edam:has_input signature:MF_01640 ; rdf:type edam:operation_0300 . BIND(STRLEN(REPLACE(SUBSTR(?templateMotifCigarP0A9B6MF_01640109, 1, (STRLEN(?templateMotifCigarP0A9B6MF_01640109) - STRLEN(REPLACE(?templateMotifCigarP0A9B6MF_01640109, CONCAT('^(?:-*[^-]){', STR(((213 - ?templateMotifSequenceMatchBeginPositionP0A9B6110) + 1)), '}'), '')))), '[a-z]', '')) AS ?step1121) . BIND((STRLEN(SUBSTR(?targetMotifMatchCigarP0A9B6MF_01640111, 1, (STRLEN(?targetMotifMatchCigarP0A9B6MF_01640111) - STRLEN(REPLACE(?targetMotifMatchCigarP0A9B6MF_01640111, CONCAT('^(?:[a-z]*(?:[A-Z]|-)){', STR(?step1121), '}'), ''))))) - STRLEN(REPLACE(SUBSTR(?targetMotifMatchCigarP0A9B6MF_01640111, 1, (STRLEN(?targetMotifMatchCigarP0A9B6MF_01640111) - STRLEN(REPLACE(?targetMotifMatchCigarP0A9B6MF_01640111, CONCAT('^(?:[a-z]*(?:[A-Z]|-)){', STR(?step1121), '}'), '')))), '[^-]', ''))) AS ?step2122) . BIND(((?step2122 + ?targetMotifMatchRegionMatchBeginPositionMF_01640112) - 1) AS ?thisPositionOn31) . BIND(STRLEN(REPLACE(SUBSTR(?templateMotifCigarP0A9B6MF_01640109, 1, (STRLEN(?templateMotifCigarP0A9B6MF_01640109) - STRLEN(REPLACE(?templateMotifCigarP0A9B6MF_01640109, CONCAT('^(?:-*[^-]){', STR(((214 - ?templateMotifSequenceMatchBeginPositionP0A9B6110) + 1)), '}'), '')))), '[a-z]', '')) AS ?step1123) . BIND((STRLEN(SUBSTR(?targetMotifMatchCigarP0A9B6MF_01640111, 1, (STRLEN(?targetMotifMatchCigarP0A9B6MF_01640111) - STRLEN(REPLACE(?targetMotifMatchCigarP0A9B6MF_01640111, CONCAT('^(?:[a-z]*(?:[A-Z]|-)){', STR(?step1123), '}'), ''))))) - STRLEN(REPLACE(SUBSTR(?targetMotifMatchCigarP0A9B6MF_01640111, 1, (STRLEN(?targetMotifMatchCigarP0A9B6MF_01640111) - STRLEN(REPLACE(?targetMotifMatchCigarP0A9B6MF_01640111, CONCAT('^(?:[a-z]*(?:[A-Z]|-)){', STR(?step1123), '}'), '')))), '[^-]', ''))) AS ?step2124) . BIND(((?step2124 + ?targetMotifMatchRegionMatchBeginPositionMF_01640112) - 1) AS ?thisPositionOn32) . BIND(?this AS ?pfs1t125) . BIND(URI(CONCAT(STR(?thisSequence), '#position', STR(?thisPositionOn31))) AS ?pfsb27) . BIND(URI(CONCAT(STR(?thisSequence), '#position', STR(?thisPositionOn32))) AS ?pfse28) . FILTER (REGEX('T[KR]', SUBSTR(?thisSequenceValue, ?thisPositionOn31, (?thisPositionOn32 - ?thisPositionOn31)))) . BIND(URI(CONCAT(STR(?this), '#MF_01640a26')) AS ?annotation26) . BIND(?this AS ?pfs25) . } OPTIONAL { ?this up:sequence ?thisSequence . ?thisSequence rdf:value ?thisSequenceValue . ?templateMotifMatch130 faldo:location ?templateMotifSequenceMatchRegionP0A9B6131 ; edam:is_output_of ?templateMotifSequenceProfileAlignmentOperationP0A9B6133 ; rdf:type edam:data_0869 ; rdf:value ?templateMotifCigarP0A9B6MF_01640126 . ?templateMotifSequenceMatchRegionP0A9B6131 faldo:begin ?templateMotifSequenceMatchBeginP0A9B6132 . ?templateMotifSequenceMatchBeginP0A9B6132 faldo:position ?templateMotifSequenceMatchBeginPositionP0A9B6127 ; faldo:reference isoform:P0A9B6-1 . ?templateMotifSequenceProfileAlignmentOperationP0A9B6133 edam:has_input signature:MF_01640 ; rdf:type edam:operation_0300 . ?targetMotifMatch134 faldo:location ?targetMotifMatchRegionMatch135 ; edam:is_output_of ?targetMotifSequenceAlignmentOperationMF_01640137 ; rdf:type edam:data_0869 ; rdf:value ?targetMotifMatchCigarP0A9B6MF_01640128 . ?targetMotifMatchRegionMatch135 faldo:begin ?targetMotifMatchRegionMatchBeginMF_01640136 . ?targetMotifMatchRegionMatchBeginMF_01640136 faldo:position ?targetMotifMatchRegionMatchBeginPositionMF_01640129 ; faldo:reference ?thisSequence . ?targetMotifSequenceAlignmentOperationMF_01640137 edam:has_input signature:MF_01640 ; rdf:type edam:operation_0300 . BIND(STRLEN(REPLACE(SUBSTR(?templateMotifCigarP0A9B6MF_01640126, 1, (STRLEN(?templateMotifCigarP0A9B6MF_01640126) - STRLEN(REPLACE(?templateMotifCigarP0A9B6MF_01640126, CONCAT('^(?:-*[^-]){', STR(((155 - ?templateMotifSequenceMatchBeginPositionP0A9B6127) + 1)), '}'), '')))), '[a-z]', '')) AS ?step1138) . BIND((STRLEN(SUBSTR(?targetMotifMatchCigarP0A9B6MF_01640128, 1, (STRLEN(?targetMotifMatchCigarP0A9B6MF_01640128) - STRLEN(REPLACE(?targetMotifMatchCigarP0A9B6MF_01640128, CONCAT('^(?:[a-z]*(?:[A-Z]|-)){', STR(?step1138), '}'), ''))))) - STRLEN(REPLACE(SUBSTR(?targetMotifMatchCigarP0A9B6MF_01640128, 1, (STRLEN(?targetMotifMatchCigarP0A9B6MF_01640128) - STRLEN(REPLACE(?targetMotifMatchCigarP0A9B6MF_01640128, CONCAT('^(?:[a-z]*(?:[A-Z]|-)){', STR(?step1138), '}'), '')))), '[^-]', ''))) AS ?step2139) . BIND(((?step2139 + ?targetMotifMatchRegionMatchBeginPositionMF_01640129) - 1) AS ?thisPositionOn37) . BIND(?thisPositionOn37 AS ?thisPositionOn38) . BIND(?this AS ?pfs1t140) . BIND(URI(CONCAT(STR(?thisSequence), '#position', STR(?thisPositionOn37))) AS ?pfsb35) . BIND(URI(CONCAT(STR(?thisSequence), '#position', STR(?thisPositionOn38))) AS ?pfse36) . FILTER ((SUBSTR(?thisSequenceValue, ?thisPositionOn37, 1) = 'C')) . BIND(URI(CONCAT(STR(?this), '#MF_01640a34')) AS ?annotation34) . BIND(?this AS ?pfs33) . } OPTIONAL { ?this up:sequence ?thisSequence . ?thisSequence rdf:value ?thisSequenceValue . ?templateMotifMatch145 faldo:location ?templateMotifSequenceMatchRegionP0A9B6146 ; edam:is_output_of ?templateMotifSequenceProfileAlignmentOperationP0A9B6148 ; rdf:type edam:data_0869 ; rdf:value ?templateMotifCigarP0A9B6MF_01640141 . ?templateMotifSequenceMatchRegionP0A9B6146 faldo:begin ?templateMotifSequenceMatchBeginP0A9B6147 . ?templateMotifSequenceMatchBeginP0A9B6147 faldo:position ?templateMotifSequenceMatchBeginPositionP0A9B6142 ; faldo:reference isoform:P0A9B6-1 . ?templateMotifSequenceProfileAlignmentOperationP0A9B6148 edam:has_input signature:MF_01640 ; rdf:type edam:operation_0300 . ?targetMotifMatch149 faldo:location ?targetMotifMatchRegionMatch150 ; edam:is_output_of ?targetMotifSequenceAlignmentOperationMF_01640152 ; rdf:type edam:data_0869 ; rdf:value ?targetMotifMatchCigarP0A9B6MF_01640143 . ?targetMotifMatchRegionMatch150 faldo:begin ?targetMotifMatchRegionMatchBeginMF_01640151 . ?targetMotifMatchRegionMatchBeginMF_01640151 faldo:position ?targetMotifMatchRegionMatchBeginPositionMF_01640144 ; faldo:reference ?thisSequence . ?targetMotifSequenceAlignmentOperationMF_01640152 edam:has_input signature:MF_01640 ; rdf:type edam:operation_0300 . BIND(STRLEN(REPLACE(SUBSTR(?templateMotifCigarP0A9B6MF_01640141, 1, (STRLEN(?templateMotifCigarP0A9B6MF_01640141) - STRLEN(REPLACE(?templateMotifCigarP0A9B6MF_01640141, CONCAT('^(?:-*[^-]){', STR(((81 - ?templateMotifSequenceMatchBeginPositionP0A9B6142) + 1)), '}'), '')))), '[a-z]', '')) AS ?step1153) . BIND((STRLEN(SUBSTR(?targetMotifMatchCigarP0A9B6MF_01640143, 1, (STRLEN(?targetMotifMatchCigarP0A9B6MF_01640143) - STRLEN(REPLACE(?targetMotifMatchCigarP0A9B6MF_01640143, CONCAT('^(?:[a-z]*(?:[A-Z]|-)){', STR(?step1153), '}'), ''))))) - STRLEN(REPLACE(SUBSTR(?targetMotifMatchCigarP0A9B6MF_01640143, 1, (STRLEN(?targetMotifMatchCigarP0A9B6MF_01640143) - STRLEN(REPLACE(?targetMotifMatchCigarP0A9B6MF_01640143, CONCAT('^(?:[a-z]*(?:[A-Z]|-)){', STR(?step1153), '}'), '')))), '[^-]', ''))) AS ?step2154) . BIND(((?step2154 + ?targetMotifMatchRegionMatchBeginPositionMF_01640144) - 1) AS ?thisPositionOn44) . BIND(?thisPositionOn44 AS ?thisPositionOn45) . BIND(?this AS ?pfs1t155) . BIND(URI(CONCAT(STR(?thisSequence), '#position', STR(?thisPositionOn44))) AS ?pfsb41) . BIND(URI(CONCAT(STR(?thisSequence), '#position', STR(?thisPositionOn45))) AS ?pfse42) . FILTER ((SUBSTR(?thisSequenceValue, ?thisPositionOn44, 1) = 'R')) . BIND(URI(CONCAT(STR(?this), '#MF_01640a40')) AS ?annotation40) . BIND(?this AS ?pfs39) . } OPTIONAL { ?this up:sequence ?thisSequence . ?thisSequence rdf:value ?thisSequenceValue . ?templateMotifMatch160 faldo:location ?templateMotifSequenceMatchRegionP0A9B6161 ; edam:is_output_of ?templateMotifSequenceProfileAlignmentOperationP0A9B6163 ; rdf:type edam:data_0869 ; rdf:value ?templateMotifCigarP0A9B6MF_01640156 . ?templateMotifSequenceMatchRegionP0A9B6161 faldo:begin ?templateMotifSequenceMatchBeginP0A9B6162 . ?templateMotifSequenceMatchBeginP0A9B6162 faldo:position ?templateMotifSequenceMatchBeginPositionP0A9B6157 ; faldo:reference isoform:P0A9B6-1 . ?templateMotifSequenceProfileAlignmentOperationP0A9B6163 edam:has_input signature:MF_01640 ; rdf:type edam:operation_0300 . ?targetMotifMatch164 faldo:location ?targetMotifMatchRegionMatch165 ; edam:is_output_of ?targetMotifSequenceAlignmentOperationMF_01640167 ; rdf:type edam:data_0869 ; rdf:value ?targetMotifMatchCigarP0A9B6MF_01640158 . ?targetMotifMatchRegionMatch165 faldo:begin ?targetMotifMatchRegionMatchBeginMF_01640166 . ?targetMotifMatchRegionMatchBeginMF_01640166 faldo:position ?targetMotifMatchRegionMatchBeginPositionMF_01640159 ; faldo:reference ?thisSequence . ?targetMotifSequenceAlignmentOperationMF_01640167 edam:has_input signature:MF_01640 ; rdf:type edam:operation_0300 . BIND(STRLEN(REPLACE(SUBSTR(?templateMotifCigarP0A9B6MF_01640156, 1, (STRLEN(?templateMotifCigarP0A9B6MF_01640156) - STRLEN(REPLACE(?templateMotifCigarP0A9B6MF_01640156, CONCAT('^(?:-*[^-]){', STR(((200 - ?templateMotifSequenceMatchBeginPositionP0A9B6157) + 1)), '}'), '')))), '[a-z]', '')) AS ?step1168) . BIND((STRLEN(SUBSTR(?targetMotifMatchCigarP0A9B6MF_01640158, 1, (STRLEN(?targetMotifMatchCigarP0A9B6MF_01640158) - STRLEN(REPLACE(?targetMotifMatchCigarP0A9B6MF_01640158, CONCAT('^(?:[a-z]*(?:[A-Z]|-)){', STR(?step1168), '}'), ''))))) - STRLEN(REPLACE(SUBSTR(?targetMotifMatchCigarP0A9B6MF_01640158, 1, (STRLEN(?targetMotifMatchCigarP0A9B6MF_01640158) - STRLEN(REPLACE(?targetMotifMatchCigarP0A9B6MF_01640158, CONCAT('^(?:[a-z]*(?:[A-Z]|-)){', STR(?step1168), '}'), '')))), '[^-]', ''))) AS ?step2169) . BIND(((?step2169 + ?targetMotifMatchRegionMatchBeginPositionMF_01640159) - 1) AS ?thisPositionOn52) . BIND(?thisPositionOn52 AS ?thisPositionOn53) . BIND(?this AS ?pfs1t170) . BIND(URI(CONCAT(STR(?thisSequence), '#position', STR(?thisPositionOn52))) AS ?pfsb48) . BIND(URI(CONCAT(STR(?thisSequence), '#position', STR(?thisPositionOn53))) AS ?pfse49) . FILTER ((SUBSTR(?thisSequenceValue, ?thisPositionOn52, 1) = 'R')) . BIND(URI(CONCAT(STR(?this), '#MF_01640a47')) AS ?annotation47) . BIND(?this AS ?pfs46) . } OPTIONAL { ?this up:sequence ?thisSequence . ?thisSequence rdf:value ?thisSequenceValue . ?templateMotifMatch175 faldo:location ?templateMotifSequenceMatchRegionP0A9B6176 ; edam:is_output_of ?templateMotifSequenceProfileAlignmentOperationP0A9B6178 ; rdf:type edam:data_0869 ; rdf:value ?templateMotifCigarP0A9B6MF_01640171 . ?templateMotifSequenceMatchRegionP0A9B6176 faldo:begin ?templateMotifSequenceMatchBeginP0A9B6177 . ?templateMotifSequenceMatchBeginP0A9B6177 faldo:position ?templateMotifSequenceMatchBeginPositionP0A9B6172 ; faldo:reference isoform:P0A9B6-1 . ?templateMotifSequenceProfileAlignmentOperationP0A9B6178 edam:has_input signature:MF_01640 ; rdf:type edam:operation_0300 . ?targetMotifMatch179 faldo:location ?targetMotifMatchRegionMatch180 ; edam:is_output_of ?targetMotifSequenceAlignmentOperationMF_01640182 ; rdf:type edam:data_0869 ; rdf:value ?targetMotifMatchCigarP0A9B6MF_01640173 . ?targetMotifMatchRegionMatch180 faldo:begin ?targetMotifMatchRegionMatchBeginMF_01640181 . ?targetMotifMatchRegionMatchBeginMF_01640181 faldo:position ?targetMotifMatchRegionMatchBeginPositionMF_01640174 ; faldo:reference ?thisSequence . ?targetMotifSequenceAlignmentOperationMF_01640182 edam:has_input signature:MF_01640 ; rdf:type edam:operation_0300 . BIND(STRLEN(REPLACE(SUBSTR(?templateMotifCigarP0A9B6MF_01640171, 1, (STRLEN(?templateMotifCigarP0A9B6MF_01640171) - STRLEN(REPLACE(?templateMotifCigarP0A9B6MF_01640171, CONCAT('^(?:-*[^-]){', STR(((236 - ?templateMotifSequenceMatchBeginPositionP0A9B6172) + 1)), '}'), '')))), '[a-z]', '')) AS ?step1183) . BIND((STRLEN(SUBSTR(?targetMotifMatchCigarP0A9B6MF_01640173, 1, (STRLEN(?targetMotifMatchCigarP0A9B6MF_01640173) - STRLEN(REPLACE(?targetMotifMatchCigarP0A9B6MF_01640173, CONCAT('^(?:[a-z]*(?:[A-Z]|-)){', STR(?step1183), '}'), ''))))) - STRLEN(REPLACE(SUBSTR(?targetMotifMatchCigarP0A9B6MF_01640173, 1, (STRLEN(?targetMotifMatchCigarP0A9B6MF_01640173) - STRLEN(REPLACE(?targetMotifMatchCigarP0A9B6MF_01640173, CONCAT('^(?:[a-z]*(?:[A-Z]|-)){', STR(?step1183), '}'), '')))), '[^-]', ''))) AS ?step2184) . BIND(((?step2184 + ?targetMotifMatchRegionMatchBeginPositionMF_01640174) - 1) AS ?thisPositionOn60) . BIND(?thisPositionOn60 AS ?thisPositionOn61) . BIND(?this AS ?pfs1t185) . BIND(URI(CONCAT(STR(?thisSequence), '#position', STR(?thisPositionOn60))) AS ?pfsb56) . BIND(URI(CONCAT(STR(?thisSequence), '#position', STR(?thisPositionOn61))) AS ?pfse57) . FILTER ((SUBSTR(?thisSequenceValue, ?thisPositionOn60, 1) = 'R')) . BIND(URI(CONCAT(STR(?this), '#MF_01640a55')) AS ?annotation55) . BIND(?this AS ?pfs54) . } OPTIONAL { ?this up:sequence ?thisSequence . ?thisSequence rdf:value ?thisSequenceValue . ?templateMotifMatch190 faldo:location ?templateMotifSequenceMatchRegionP0A9B6191 ; edam:is_output_of ?templateMotifSequenceProfileAlignmentOperationP0A9B6193 ; rdf:type edam:data_0869 ; rdf:value ?templateMotifCigarP0A9B6MF_01640186 . ?templateMotifSequenceMatchRegionP0A9B6191 faldo:begin ?templateMotifSequenceMatchBeginP0A9B6192 . ?templateMotifSequenceMatchBeginP0A9B6192 faldo:position ?templateMotifSequenceMatchBeginPositionP0A9B6187 ; faldo:reference isoform:P0A9B6-1 . ?templateMotifSequenceProfileAlignmentOperationP0A9B6193 edam:has_input signature:MF_01640 ; rdf:type edam:operation_0300 . ?targetMotifMatch194 faldo:location ?targetMotifMatchRegionMatch195 ; edam:is_output_of ?targetMotifSequenceAlignmentOperationMF_01640197 ; rdf:type edam:data_0869 ; rdf:value ?targetMotifMatchCigarP0A9B6MF_01640188 . ?targetMotifMatchRegionMatch195 faldo:begin ?targetMotifMatchRegionMatchBeginMF_01640196 . ?targetMotifMatchRegionMatchBeginMF_01640196 faldo:position ?targetMotifMatchRegionMatchBeginPositionMF_01640189 ; faldo:reference ?thisSequence . ?targetMotifSequenceAlignmentOperationMF_01640197 edam:has_input signature:MF_01640 ; rdf:type edam:operation_0300 . BIND(STRLEN(REPLACE(SUBSTR(?templateMotifCigarP0A9B6MF_01640186, 1, (STRLEN(?templateMotifCigarP0A9B6MF_01640186) - STRLEN(REPLACE(?templateMotifCigarP0A9B6MF_01640186, CONCAT('^(?:-*[^-]){', STR(((318 - ?templateMotifSequenceMatchBeginPositionP0A9B6187) + 1)), '}'), '')))), '[a-z]', '')) AS ?step1198) . BIND((STRLEN(SUBSTR(?targetMotifMatchCigarP0A9B6MF_01640188, 1, (STRLEN(?targetMotifMatchCigarP0A9B6MF_01640188) - STRLEN(REPLACE(?targetMotifMatchCigarP0A9B6MF_01640188, CONCAT('^(?:[a-z]*(?:[A-Z]|-)){', STR(?step1198), '}'), ''))))) - STRLEN(REPLACE(SUBSTR(?targetMotifMatchCigarP0A9B6MF_01640188, 1, (STRLEN(?targetMotifMatchCigarP0A9B6MF_01640188) - STRLEN(REPLACE(?targetMotifMatchCigarP0A9B6MF_01640188, CONCAT('^(?:[a-z]*(?:[A-Z]|-)){', STR(?step1198), '}'), '')))), '[^-]', ''))) AS ?step2199) . BIND(((?step2199 + ?targetMotifMatchRegionMatchBeginPositionMF_01640189) - 1) AS ?thisPositionOn67) . BIND(?thisPositionOn67 AS ?thisPositionOn68) . BIND(?this AS ?pfs1t200) . BIND(URI(CONCAT(STR(?thisSequence), '#position', STR(?thisPositionOn67))) AS ?pfsb64) . BIND(URI(CONCAT(STR(?thisSequence), '#position', STR(?thisPositionOn68))) AS ?pfse65) . FILTER ((SUBSTR(?thisSequenceValue, ?thisPositionOn67, 1) = 'N')) . BIND(URI(CONCAT(STR(?this), '#MF_01640a63')) AS ?annotation63) . BIND(?this AS ?pfs62) . } OPTIONAL { ?this up:sequence ?thisSequence . ?thisSequence rdf:value ?thisSequenceValue . ?templateMotifMatch205 faldo:location ?templateMotifSequenceMatchRegionP0A9B6206 ; edam:is_output_of ?templateMotifSequenceProfileAlignmentOperationP0A9B6208 ; rdf:type edam:data_0869 ; rdf:value ?templateMotifCigarP0A9B6MF_01640201 . ?templateMotifSequenceMatchRegionP0A9B6206 faldo:begin ?templateMotifSequenceMatchBeginP0A9B6207 . ?templateMotifSequenceMatchBeginP0A9B6207 faldo:position ?templateMotifSequenceMatchBeginPositionP0A9B6202 ; faldo:reference isoform:P0A9B6-1 . ?templateMotifSequenceProfileAlignmentOperationP0A9B6208 edam:has_input signature:MF_01640 ; rdf:type edam:operation_0300 . ?targetMotifMatch209 faldo:location ?targetMotifMatchRegionMatch210 ; edam:is_output_of ?targetMotifSequenceAlignmentOperationMF_01640212 ; rdf:type edam:data_0869 ; rdf:value ?targetMotifMatchCigarP0A9B6MF_01640203 . ?targetMotifMatchRegionMatch210 faldo:begin ?targetMotifMatchRegionMatchBeginMF_01640211 . ?targetMotifMatchRegionMatchBeginMF_01640211 faldo:position ?targetMotifMatchRegionMatchBeginPositionMF_01640204 ; faldo:reference ?thisSequence . ?targetMotifSequenceAlignmentOperationMF_01640212 edam:has_input signature:MF_01640 ; rdf:type edam:operation_0300 . BIND(STRLEN(REPLACE(SUBSTR(?templateMotifCigarP0A9B6MF_01640201, 1, (STRLEN(?templateMotifCigarP0A9B6MF_01640201) - STRLEN(REPLACE(?templateMotifCigarP0A9B6MF_01640201, CONCAT('^(?:-*[^-]){', STR(((182 - ?templateMotifSequenceMatchBeginPositionP0A9B6202) + 1)), '}'), '')))), '[a-z]', '')) AS ?step1213) . BIND((STRLEN(SUBSTR(?targetMotifMatchCigarP0A9B6MF_01640203, 1, (STRLEN(?targetMotifMatchCigarP0A9B6MF_01640203) - STRLEN(REPLACE(?targetMotifMatchCigarP0A9B6MF_01640203, CONCAT('^(?:[a-z]*(?:[A-Z]|-)){', STR(?step1213), '}'), ''))))) - STRLEN(REPLACE(SUBSTR(?targetMotifMatchCigarP0A9B6MF_01640203, 1, (STRLEN(?targetMotifMatchCigarP0A9B6MF_01640203) - STRLEN(REPLACE(?targetMotifMatchCigarP0A9B6MF_01640203, CONCAT('^(?:[a-z]*(?:[A-Z]|-)){', STR(?step1213), '}'), '')))), '[^-]', ''))) AS ?step2214) . BIND(((?step2214 + ?targetMotifMatchRegionMatchBeginPositionMF_01640204) - 1) AS ?thisPositionOn73) . BIND(?thisPositionOn73 AS ?thisPositionOn74) . BIND(?this AS ?pfs1t215) . BIND(URI(CONCAT(STR(?thisSequence), '#position', STR(?thisPositionOn73))) AS ?pfsb71) . BIND(URI(CONCAT(STR(?thisSequence), '#position', STR(?thisPositionOn74))) AS ?pfse72) . FILTER ((SUBSTR(?thisSequenceValue, ?thisPositionOn73, 1) = 'H')) . BIND(URI(CONCAT(STR(?this), '#MF_01640a70')) AS ?annotation70) . BIND(?this AS ?pfs69) . } }