CONSTRUCT { _:598913 up:source unirule:MF_01643 . _:598914 up:source unirule:MF_01643 . _:598915 up:source unirule:MF_01643 . _:598916 up:source unirule:MF_01643 . _:598917 up:source unirule:MF_01643 . _:598918 up:source unirule:MF_01643 . _:598919 up:source unirule:MF_01643 . _:598920 up:source unirule:MF_01643 . _:598921 up:source unirule:MF_01643 . _:598922 up:source unirule:MF_01643 . _:598923 up:source unirule:MF_01643 . _:598924 up:source unirule:MF_01643 . _:598925 up:source unirule:MF_01643 . _:598926 up:source unirule:MF_01643 . _:598927 up:source unirule:MF_01643 . _:598928 up:source unirule:MF_01643 . _:598929 up:source unirule:MF_01643 . _:598930 up:source unirule:MF_01643 . _:598931 up:source unirule:MF_01643 . _:598932 up:source unirule:MF_01643 . _:598933 up:source unirule:MF_01643 . _:598934 up:source unirule:MF_01643 . _:598935 up:source unirule:MF_01643 . _:598936 up:source unirule:MF_01643 . _:598937 up:source unirule:MF_01643 . _:598938 up:source unirule:MF_01643 . _:598939 up:source unirule:MF_01643 . _:598940 up:source unirule:MF_01643 . _:598941 up:source unirule:MF_01643 . _:598942 up:source unirule:MF_01643 . _:598943 up:source unirule:MF_01643 . _:598944 up:source unirule:MF_01643 . _:598945 up:source unirule:MF_01643 . _:598946 up:source unirule:MF_01643 . _:598947 up:source unirule:MF_01643 . ?this up:alternativeName ?name1 , ?name2 , ?name3 , ?name4 , ?name5 ; up:annotation ?annotation7 , ?annotation8 , ?annotation10 , ?annotation11 , ?annotation12 ; up:classifiedWith GO:0000166 , GO:0005524 , GO:0006189 , GO:0043815 , keyword:436 , keyword:460 , keyword:479 , keyword:547 , keyword:658 , keyword:67 ; up:recommendedName ?name0 . ?name0 up:ecName '6.3.1.21' ; up:fullName 'Formate-dependent phosphoribosylglycinamide formyltransferase' ; rdf:type up:Structured_Name . ?name1 up:fullName 'Formate-dependent GAR transformylase' ; rdf:type up:Structured_Name . ?name2 up:fullName 'Non-folate glycinamide ribonucleotide transformylase' ; rdf:type up:Structured_Name . ?name3 up:fullName 'Phosphoribosylglycinamide formyltransferase 2' ; rdf:type up:Structured_Name . ?name4 up:fullName "5'-phosphoribosylglycinamide transformylase 2" ; rdf:type up:Structured_Name . ?name5 up:fullName 'GAR transformylase 2' ; up:shortName 'GART 2' ; rdf:type up:Structured_Name . ?gene6 skos:prefLabel 'purT' . ?annotation7 a up:Function_Annotation ; rdfs:comment 'Involved in the de novo purine biosynthesis. Catalyzes the transfer of formate to 5-phospho-ribosyl-glycinamide (GAR), producing 5-phospho-ribosyl-N-formylglycinamide (FGAR). Formate is provided by PurU via hydrolysis of 10-formyl-tetrahydrofolate.' . ?annotation8 up:activity ?activity9 ; rdf:type up:Catalytic_Activity_Annotation . ?activity9 up:catalyticActivity <http://rdf.rhea-db.org/24829>; up:enzymeClass <http://purl.uniprot.org/enzyme/6.3.1.21>. ?annotation10 a up:Pathway_Annotation ; rdfs:comment 'Purine metabolism; IMP biosynthesis via de novo pathway; N(2)-formyl-N(1)-(5-phospho-D-ribosyl)glycinamide from N(1)-(5-phospho-D-ribosyl)glycinamide (formate route): step 1/1.' . ?annotation11 a up:Subunit_Annotation ; rdfs:comment 'Homodimer.' . ?annotation12 a up:Similarity_Annotation ; rdfs:comment 'Belongs to the PurK/PurT family.' . ?pfs13 up:annotation ?annotation14 . ?annotation14 faldo:begin ?pfsb15 ; faldo:end ?pfse16 ; up:ligand ?ligand17 ; rdf:type up:Binding_Site_Annotation . ?pfsb15 faldo:position ?thisPositionOn18 ; rdf:type faldo:ExactPosition . ?pfse16 faldo:position ?thisPositionOn19 ; rdf:type faldo:ExactPosition . ?ligand17 rdfs:subClassOf chebi:30616 . ?pfs20 up:annotation ?annotation21 . ?annotation21 faldo:begin ?pfsb22 ; faldo:end ?pfse23 ; up:ligand ?ligand24 ; rdf:type up:Binding_Site_Annotation . ?pfsb22 faldo:position ?thisPositionOn25 ; rdf:type faldo:ExactPosition . ?pfse23 faldo:position ?thisPositionOn26 ; rdf:type faldo:ExactPosition . ?ligand24 rdfs:subClassOf chebi:30616 . ?pfs27 up:annotation ?annotation28 . ?annotation28 faldo:begin ?pfsb29 ; faldo:end ?pfse30 ; up:ligand ?ligand31 ; rdf:type up:Binding_Site_Annotation . ?pfsb29 faldo:position ?thisPositionOn32 ; rdf:type faldo:ExactPosition . ?pfse30 faldo:position ?thisPositionOn33 ; rdf:type faldo:ExactPosition . ?ligand31 rdfs:subClassOf chebi:143788 . ?pfs34 up:annotation ?annotation35 . ?annotation35 faldo:begin ?pfsb36 ; faldo:end ?pfse37 ; up:ligand ?ligand38 ; rdf:type up:Binding_Site_Annotation . ?pfsb36 faldo:position ?thisPositionOn39 ; rdf:type faldo:ExactPosition . ?pfse37 faldo:position ?thisPositionOn40 ; rdf:type faldo:ExactPosition . ?ligand38 rdfs:subClassOf chebi:143788 . ?pfs41 up:annotation ?annotation42 . ?annotation42 faldo:begin ?pfsb43 ; faldo:end ?pfse44 ; up:ligand ?ligand45 ; rdf:type up:Binding_Site_Annotation . ?pfsb43 faldo:position ?thisPositionOn46 ; rdf:type faldo:ExactPosition . ?pfse44 faldo:position ?thisPositionOn47 ; rdf:type faldo:ExactPosition . ?ligand45 rdfs:subClassOf chebi:18420 . ?pfs48 up:annotation ?annotation49 . ?annotation49 faldo:begin ?pfsb50 ; faldo:end ?pfse51 ; up:ligand ?ligand52 ; rdf:type up:Binding_Site_Annotation . ?pfsb50 faldo:position ?thisPositionOn53 ; rdf:type faldo:ExactPosition . ?pfse51 faldo:position ?thisPositionOn54 ; rdf:type faldo:ExactPosition . ?ligand52 rdfs:subClassOf chebi:18420 . ?pfs55 up:annotation ?annotation56 . ?annotation56 faldo:begin ?pfsb57 ; faldo:end ?pfse58 ; up:ligand ?ligand59 ; rdf:type up:Binding_Site_Annotation . ?pfsb57 faldo:position ?thisPositionOn60 ; rdf:type faldo:ExactPosition . ?pfse58 faldo:position ?thisPositionOn61 ; rdf:type faldo:ExactPosition . ?ligand59 rdfs:subClassOf chebi:143788 . ?pfs62 up:annotation ?annotation63 . ?annotation63 faldo:begin ?pfsb64 ; faldo:end ?pfse65 ; up:ligand ?ligand66 ; rdf:type up:Binding_Site_Annotation . ?pfsb64 faldo:position ?thisPositionOn67 ; rdf:type faldo:ExactPosition . ?pfse65 faldo:position ?thisPositionOn68 ; rdf:type faldo:ExactPosition . ?ligand66 rdfs:subClassOf chebi:30616 . ?pfs69 up:annotation ?annotation70 . ?annotation70 faldo:begin ?pfsb71 ; faldo:end ?pfse72 ; up:ligand ?ligand73 ; rdf:type up:Binding_Site_Annotation . ?pfsb71 faldo:position ?thisPositionOn74 ; rdf:type faldo:ExactPosition . ?pfse72 faldo:position ?thisPositionOn75 ; rdf:type faldo:ExactPosition . ?ligand73 rdfs:subClassOf chebi:30616 . ?pfs76 up:annotation ?annotation77 . ?annotation77 faldo:begin ?pfsb78 ; faldo:end ?pfse79 ; up:ligand ?ligand80 ; rdf:type up:Binding_Site_Annotation . ?pfsb78 faldo:position ?thisPositionOn81 ; rdf:type faldo:ExactPosition . ?pfse79 faldo:position ?thisPositionOn82 ; rdf:type faldo:ExactPosition . ?ligand80 rdfs:subClassOf chebi:30616 . ?pfs83 up:annotation ?annotation84 . ?annotation84 faldo:begin ?pfsb85 ; faldo:end ?pfse86 ; up:ligand ?ligand87 ; rdf:type up:Binding_Site_Annotation . ?pfsb85 faldo:position ?thisPositionOn88 ; rdf:type faldo:ExactPosition . ?pfse86 faldo:position ?thisPositionOn89 ; rdf:type faldo:ExactPosition . ?ligand87 rdfs:subClassOf chebi:143788 . ?pfs90 up:annotation ?annotation91 . ?annotation91 faldo:begin ?pfsb92 ; faldo:end ?pfse93 ; up:ligand ?ligand94 ; rdf:type up:Binding_Site_Annotation . ?pfsb92 faldo:position ?thisPositionOn95 ; rdf:type faldo:ExactPosition . ?pfse93 faldo:position ?thisPositionOn96 ; rdf:type faldo:ExactPosition . ?ligand94 rdfs:subClassOf chebi:143788 . ?pfs97 up:annotation ?annotation98 . ?annotation98 faldo:begin ?pfsb99 ; faldo:end ?pfse100 ; rdf:type up:Domain_Extent_Annotation ; rdfs:comment 'ATP-grasp' . ?pfsb99 faldo:position ?thisPositionOn101 ; rdf:type faldo:ExactPosition . ?pfse100 faldo:position ?thisPositionOn102 ; rdf:type faldo:ExactPosition . _:598948 a rdf:Statement ; up:attribution _:598913 ; rdf:subject ?this ; rdf:predicate up:recommendedName ; rdf:object ?name0 . _:598949 a rdf:Statement ; up:attribution _:598914 ; rdf:subject ?this ; rdf:predicate up:alternativeName ; rdf:object ?name1 . _:598950 a rdf:Statement ; up:attribution _:598915 ; rdf:subject ?this ; rdf:predicate up:alternativeName ; rdf:object ?name2 . _:598951 a rdf:Statement ; up:attribution _:598916 ; rdf:subject ?this ; rdf:predicate up:alternativeName ; rdf:object ?name3 . _:598952 a rdf:Statement ; up:attribution _:598917 ; rdf:subject ?this ; rdf:predicate up:alternativeName ; rdf:object ?name4 . _:598953 a rdf:Statement ; up:attribution _:598918 ; rdf:subject ?this ; rdf:predicate up:alternativeName ; rdf:object ?name5 . _:598954 a rdf:Statement ; up:attribution _:598919 ; rdf:subject ?gene6 ; rdf:predicate up:encodedBy ; rdf:object ?gene6 . _:598955 a rdf:Statement ; up:attribution _:598920 ; rdf:subject ?this ; rdf:predicate up:annotation ; rdf:object ?annotation7 . _:598956 a rdf:Statement ; up:attribution _:598921 ; rdf:subject ?this ; rdf:predicate up:annotation ; rdf:object ?annotation8 . _:598957 a rdf:Statement ; up:attribution _:598922 ; rdf:subject ?this ; rdf:predicate up:annotation ; rdf:object ?annotation10 . _:598958 a rdf:Statement ; up:attribution _:598923 ; rdf:subject ?this ; rdf:predicate up:annotation ; rdf:object ?annotation11 . _:598959 a rdf:Statement ; up:attribution _:598924 ; rdf:subject ?this ; rdf:predicate up:annotation ; rdf:object ?annotation12 . _:598960 a rdf:Statement ; up:attribution _:598925 ; rdf:subject ?this ; rdf:predicate up:classifiedWith ; rdf:object keyword:67 . _:598961 a rdf:Statement ; up:attribution _:598926 ; rdf:subject ?this ; rdf:predicate up:classifiedWith ; rdf:object keyword:436 . _:598962 a rdf:Statement ; up:attribution _:598927 ; rdf:subject ?this ; rdf:predicate up:classifiedWith ; rdf:object keyword:479 . _:598963 a rdf:Statement ; up:attribution _:598928 ; rdf:subject ?this ; rdf:predicate up:classifiedWith ; rdf:object keyword:460 . _:598964 a rdf:Statement ; up:attribution _:598929 ; rdf:subject ?this ; rdf:predicate up:classifiedWith ; rdf:object keyword:547 . _:598965 a rdf:Statement ; up:attribution _:598930 ; rdf:subject ?this ; rdf:predicate up:classifiedWith ; rdf:object keyword:658 . _:598966 a rdf:Statement ; up:attribution _:598931 ; rdf:subject ?this ; rdf:predicate up:classifiedWith ; rdf:object GO:0000166 . _:598967 a rdf:Statement ; up:attribution _:598932 ; rdf:subject ?this ; rdf:predicate up:classifiedWith ; rdf:object GO:0005524 . _:598968 a rdf:Statement ; up:attribution _:598933 ; rdf:subject ?this ; rdf:predicate up:classifiedWith ; rdf:object GO:0043815 . _:598969 a rdf:Statement ; up:attribution _:598934 ; rdf:subject ?this ; rdf:predicate up:classifiedWith ; rdf:object GO:0006189 . _:598970 a rdf:Statement ; up:source unirule:MF_01643 ; rdf:subject ?pfs13 ; rdf:predicate up:annotation ; rdf:object ?annotation14 . _:598971 a rdf:Statement ; up:attribution _:598935 ; rdf:subject ?pfs13 ; rdf:predicate up:annotation ; rdf:object ?annotation14 . _:598972 a rdf:Statement ; up:source unirule:MF_01643 ; rdf:subject ?pfs20 ; rdf:predicate up:annotation ; rdf:object ?annotation21 . _:598973 a rdf:Statement ; up:attribution _:598936 ; rdf:subject ?pfs20 ; rdf:predicate up:annotation ; rdf:object ?annotation21 . _:598974 a rdf:Statement ; up:source unirule:MF_01643 ; rdf:subject ?pfs27 ; rdf:predicate up:annotation ; rdf:object ?annotation28 . _:598975 a rdf:Statement ; up:attribution _:598937 ; rdf:subject ?pfs27 ; rdf:predicate up:annotation ; rdf:object ?annotation28 . _:598976 a rdf:Statement ; up:source unirule:MF_01643 ; rdf:subject ?pfs34 ; rdf:predicate up:annotation ; rdf:object ?annotation35 . _:598977 a rdf:Statement ; up:attribution _:598938 ; rdf:subject ?pfs34 ; rdf:predicate up:annotation ; rdf:object ?annotation35 . _:598978 a rdf:Statement ; up:source unirule:MF_01643 ; rdf:subject ?pfs41 ; rdf:predicate up:annotation ; rdf:object ?annotation42 . _:598979 a rdf:Statement ; up:attribution _:598939 ; rdf:subject ?pfs41 ; rdf:predicate up:annotation ; rdf:object ?annotation42 . _:598980 a rdf:Statement ; up:source unirule:MF_01643 ; rdf:subject ?pfs48 ; rdf:predicate up:annotation ; rdf:object ?annotation49 . _:598981 a rdf:Statement ; up:attribution _:598940 ; rdf:subject ?pfs48 ; rdf:predicate up:annotation ; rdf:object ?annotation49 . _:598982 a rdf:Statement ; up:source unirule:MF_01643 ; rdf:subject ?pfs55 ; rdf:predicate up:annotation ; rdf:object ?annotation56 . _:598983 a rdf:Statement ; up:attribution _:598941 ; rdf:subject ?pfs55 ; rdf:predicate up:annotation ; rdf:object ?annotation56 . _:598984 a rdf:Statement ; up:source unirule:MF_01643 ; rdf:subject ?pfs62 ; rdf:predicate up:annotation ; rdf:object ?annotation63 . _:598985 a rdf:Statement ; up:attribution _:598942 ; rdf:subject ?pfs62 ; rdf:predicate up:annotation ; rdf:object ?annotation63 . _:598986 a rdf:Statement ; up:source unirule:MF_01643 ; rdf:subject ?pfs69 ; rdf:predicate up:annotation ; rdf:object ?annotation70 . _:598987 a rdf:Statement ; up:attribution _:598943 ; rdf:subject ?pfs69 ; rdf:predicate up:annotation ; rdf:object ?annotation70 . _:598988 a rdf:Statement ; up:source unirule:MF_01643 ; rdf:subject ?pfs76 ; rdf:predicate up:annotation ; rdf:object ?annotation77 . _:598989 a rdf:Statement ; up:attribution _:598944 ; rdf:subject ?pfs76 ; rdf:predicate up:annotation ; rdf:object ?annotation77 . _:598990 a rdf:Statement ; up:source unirule:MF_01643 ; rdf:subject ?pfs83 ; rdf:predicate up:annotation ; rdf:object ?annotation84 . _:598991 a rdf:Statement ; up:attribution _:598945 ; rdf:subject ?pfs83 ; rdf:predicate up:annotation ; rdf:object ?annotation84 . _:598992 a rdf:Statement ; up:source unirule:MF_01643 ; rdf:subject ?pfs90 ; rdf:predicate up:annotation ; rdf:object ?annotation91 . _:598993 a rdf:Statement ; up:attribution _:598946 ; rdf:subject ?pfs90 ; rdf:predicate up:annotation ; rdf:object ?annotation91 . _:598994 a rdf:Statement ; up:source unirule:MF_01643 ; rdf:subject ?pfs97 ; rdf:predicate up:annotation ; rdf:object ?annotation98 . _:598995 a rdf:Statement ; up:attribution _:598947 ; rdf:subject ?pfs97 ; rdf:predicate up:annotation ; rdf:object ?annotation98 . } WHERE { #baseURI: http://purl.uniprot.org/unirule/MF_01643 #Rule MF_01643 Created by:? on:2008-01-24 Modified by:Edouard de Castro on:2024-09-03 VALUES ?supertaxon103 {taxon:2 taxon:2157} ?this up:organism ?thisOrganism ; rdfs:seeAlso signature:MF_01643 . ?thisOrganism rdfs:subClassOf+ ?supertaxon103 . BIND(URI(CONCAT(STR(?this), '#MF_01643a0')) AS ?name0) . BIND(URI(CONCAT(STR(?this), '#MF_01643a1')) AS ?name1) . BIND(URI(CONCAT(STR(?this), '#MF_01643a2')) AS ?name2) . BIND(URI(CONCAT(STR(?this), '#MF_01643a3')) AS ?name3) . BIND(URI(CONCAT(STR(?this), '#MF_01643a4')) AS ?name4) . BIND(URI(CONCAT(STR(?this), '#MF_01643a5')) AS ?name5) . BIND(URI(CONCAT(STR(?this), '#MF_01643a7')) AS ?annotation7) . BIND(URI(CONCAT(STR(?this), '#MF_01643a8')) AS ?annotation8) . BIND(URI(CONCAT(STR(?this), '#MF_01643a10')) AS ?annotation10) . BIND(URI(CONCAT(STR(?this), '#MF_01643a11')) AS ?annotation11) . BIND(URI(CONCAT(STR(?this), '#MF_01643a12')) AS ?annotation12) . OPTIONAL { ?this up:sequence ?thisSequence . ?thisSequence rdf:value ?thisSequenceValue . ?templateMotifMatch108 faldo:location ?templateMotifSequenceMatchRegionP33221109 ; edam:is_output_of ?templateMotifSequenceProfileAlignmentOperationP33221111 ; rdf:type edam:data_0869 ; rdf:value ?templateMotifCigarP33221MF_01643104 . ?templateMotifSequenceMatchRegionP33221109 faldo:begin ?templateMotifSequenceMatchBeginP33221110 . ?templateMotifSequenceMatchBeginP33221110 faldo:position ?templateMotifSequenceMatchBeginPositionP33221105 ; faldo:reference isoform:P33221-1 . ?templateMotifSequenceProfileAlignmentOperationP33221111 edam:has_input signature:MF_01643 ; rdf:type edam:operation_0300 . ?targetMotifMatch112 faldo:location ?targetMotifMatchRegionMatch113 ; edam:is_output_of ?targetMotifSequenceAlignmentOperationMF_01643115 ; rdf:type edam:data_0869 ; rdf:value ?targetMotifMatchCigarP33221MF_01643106 . ?targetMotifMatchRegionMatch113 faldo:begin ?targetMotifMatchRegionMatchBeginMF_01643114 . ?targetMotifMatchRegionMatchBeginMF_01643114 faldo:position ?targetMotifMatchRegionMatchBeginPositionMF_01643107 ; faldo:reference ?thisSequence . ?targetMotifSequenceAlignmentOperationMF_01643115 edam:has_input signature:MF_01643 ; rdf:type edam:operation_0300 . BIND(STRLEN(REPLACE(SUBSTR(?templateMotifCigarP33221MF_01643104, 1, (STRLEN(?templateMotifCigarP33221MF_01643104) - STRLEN(REPLACE(?templateMotifCigarP33221MF_01643104, CONCAT('^(?:-*[^-]){', STR(((160 - ?templateMotifSequenceMatchBeginPositionP33221105) + 1)), '}'), '')))), '[a-z]', '')) AS ?step1116) . BIND((STRLEN(SUBSTR(?targetMotifMatchCigarP33221MF_01643106, 1, (STRLEN(?targetMotifMatchCigarP33221MF_01643106) - STRLEN(REPLACE(?targetMotifMatchCigarP33221MF_01643106, CONCAT('^(?:[a-z]*(?:[A-Z]|-)){', STR(?step1116), '}'), ''))))) - STRLEN(REPLACE(SUBSTR(?targetMotifMatchCigarP33221MF_01643106, 1, (STRLEN(?targetMotifMatchCigarP33221MF_01643106) - STRLEN(REPLACE(?targetMotifMatchCigarP33221MF_01643106, CONCAT('^(?:[a-z]*(?:[A-Z]|-)){', STR(?step1116), '}'), '')))), '[^-]', ''))) AS ?step2117) . BIND(((?step2117 + ?targetMotifMatchRegionMatchBeginPositionMF_01643107) - 1) AS ?thisPositionOn18) . BIND(STRLEN(REPLACE(SUBSTR(?templateMotifCigarP33221MF_01643104, 1, (STRLEN(?templateMotifCigarP33221MF_01643104) - STRLEN(REPLACE(?templateMotifCigarP33221MF_01643104, CONCAT('^(?:-*[^-]){', STR(((165 - ?templateMotifSequenceMatchBeginPositionP33221105) + 1)), '}'), '')))), '[a-z]', '')) AS ?step1118) . BIND((STRLEN(SUBSTR(?targetMotifMatchCigarP33221MF_01643106, 1, (STRLEN(?targetMotifMatchCigarP33221MF_01643106) - STRLEN(REPLACE(?targetMotifMatchCigarP33221MF_01643106, CONCAT('^(?:[a-z]*(?:[A-Z]|-)){', STR(?step1118), '}'), ''))))) - STRLEN(REPLACE(SUBSTR(?targetMotifMatchCigarP33221MF_01643106, 1, (STRLEN(?targetMotifMatchCigarP33221MF_01643106) - STRLEN(REPLACE(?targetMotifMatchCigarP33221MF_01643106, CONCAT('^(?:[a-z]*(?:[A-Z]|-)){', STR(?step1118), '}'), '')))), '[^-]', ''))) AS ?step2119) . BIND(((?step2119 + ?targetMotifMatchRegionMatchBeginPositionMF_01643107) - 1) AS ?thisPositionOn19) . BIND(?this AS ?pfs1t120) . BIND(URI(CONCAT(STR(?thisSequence), '#position', STR(?thisPositionOn18))) AS ?pfsb15) . BIND(URI(CONCAT(STR(?thisSequence), '#position', STR(?thisPositionOn19))) AS ?pfse16) . FILTER (REGEX('SSG[ARNDCQEGHILKMFPSTWYVBZJUOX]GQ', SUBSTR(?thisSequenceValue, ?thisPositionOn18, (?thisPositionOn19 - ?thisPositionOn18)))) . BIND(URI(CONCAT(STR(?this), '#MF_01643a14')) AS ?annotation14) . BIND(?this AS ?pfs13) . } OPTIONAL { ?this up:sequence ?thisSequence . ?thisSequence rdf:value ?thisSequenceValue . ?templateMotifMatch125 faldo:location ?templateMotifSequenceMatchRegionP33221126 ; edam:is_output_of ?templateMotifSequenceProfileAlignmentOperationP33221128 ; rdf:type edam:data_0869 ; rdf:value ?templateMotifCigarP33221MF_01643121 . ?templateMotifSequenceMatchRegionP33221126 faldo:begin ?templateMotifSequenceMatchBeginP33221127 . ?templateMotifSequenceMatchBeginP33221127 faldo:position ?templateMotifSequenceMatchBeginPositionP33221122 ; faldo:reference isoform:P33221-1 . ?templateMotifSequenceProfileAlignmentOperationP33221128 edam:has_input signature:MF_01643 ; rdf:type edam:operation_0300 . ?targetMotifMatch129 faldo:location ?targetMotifMatchRegionMatch130 ; edam:is_output_of ?targetMotifSequenceAlignmentOperationMF_01643132 ; rdf:type edam:data_0869 ; rdf:value ?targetMotifMatchCigarP33221MF_01643123 . ?targetMotifMatchRegionMatch130 faldo:begin ?targetMotifMatchRegionMatchBeginMF_01643131 . ?targetMotifMatchRegionMatchBeginMF_01643131 faldo:position ?targetMotifMatchRegionMatchBeginPositionMF_01643124 ; faldo:reference ?thisSequence . ?targetMotifSequenceAlignmentOperationMF_01643132 edam:has_input signature:MF_01643 ; rdf:type edam:operation_0300 . BIND(STRLEN(REPLACE(SUBSTR(?templateMotifCigarP33221MF_01643121, 1, (STRLEN(?templateMotifCigarP33221MF_01643121) - STRLEN(REPLACE(?templateMotifCigarP33221MF_01643121, CONCAT('^(?:-*[^-]){', STR(((195 - ?templateMotifSequenceMatchBeginPositionP33221122) + 1)), '}'), '')))), '[a-z]', '')) AS ?step1133) . BIND((STRLEN(SUBSTR(?targetMotifMatchCigarP33221MF_01643123, 1, (STRLEN(?targetMotifMatchCigarP33221MF_01643123) - STRLEN(REPLACE(?targetMotifMatchCigarP33221MF_01643123, CONCAT('^(?:[a-z]*(?:[A-Z]|-)){', STR(?step1133), '}'), ''))))) - STRLEN(REPLACE(SUBSTR(?targetMotifMatchCigarP33221MF_01643123, 1, (STRLEN(?targetMotifMatchCigarP33221MF_01643123) - STRLEN(REPLACE(?targetMotifMatchCigarP33221MF_01643123, CONCAT('^(?:[a-z]*(?:[A-Z]|-)){', STR(?step1133), '}'), '')))), '[^-]', ''))) AS ?step2134) . BIND(((?step2134 + ?targetMotifMatchRegionMatchBeginPositionMF_01643124) - 1) AS ?thisPositionOn25) . BIND(STRLEN(REPLACE(SUBSTR(?templateMotifCigarP33221MF_01643121, 1, (STRLEN(?templateMotifCigarP33221MF_01643121) - STRLEN(REPLACE(?templateMotifCigarP33221MF_01643121, CONCAT('^(?:-*[^-]){', STR(((198 - ?templateMotifSequenceMatchBeginPositionP33221122) + 1)), '}'), '')))), '[a-z]', '')) AS ?step1135) . BIND((STRLEN(SUBSTR(?targetMotifMatchCigarP33221MF_01643123, 1, (STRLEN(?targetMotifMatchCigarP33221MF_01643123) - STRLEN(REPLACE(?targetMotifMatchCigarP33221MF_01643123, CONCAT('^(?:[a-z]*(?:[A-Z]|-)){', STR(?step1135), '}'), ''))))) - STRLEN(REPLACE(SUBSTR(?targetMotifMatchCigarP33221MF_01643123, 1, (STRLEN(?targetMotifMatchCigarP33221MF_01643123) - STRLEN(REPLACE(?targetMotifMatchCigarP33221MF_01643123, CONCAT('^(?:[a-z]*(?:[A-Z]|-)){', STR(?step1135), '}'), '')))), '[^-]', ''))) AS ?step2136) . BIND(((?step2136 + ?targetMotifMatchRegionMatchBeginPositionMF_01643124) - 1) AS ?thisPositionOn26) . BIND(?this AS ?pfs1t137) . BIND(URI(CONCAT(STR(?thisSequence), '#position', STR(?thisPositionOn25))) AS ?pfsb22) . BIND(URI(CONCAT(STR(?thisSequence), '#position', STR(?thisPositionOn26))) AS ?pfse23) . FILTER (REGEX('E[ARNDCQEGHILKMFPSTWYVBZJUOX][ARNDCQEGHILKMFPSTWYVBZJUOX][VIAL]', SUBSTR(?thisSequenceValue, ?thisPositionOn25, (?thisPositionOn26 - ?thisPositionOn25)))) . BIND(URI(CONCAT(STR(?this), '#MF_01643a21')) AS ?annotation21) . BIND(?this AS ?pfs20) . } OPTIONAL { ?this up:sequence ?thisSequence . ?thisSequence rdf:value ?thisSequenceValue . ?templateMotifMatch142 faldo:location ?templateMotifSequenceMatchRegionP33221143 ; edam:is_output_of ?templateMotifSequenceProfileAlignmentOperationP33221145 ; rdf:type edam:data_0869 ; rdf:value ?templateMotifCigarP33221MF_01643138 . ?templateMotifSequenceMatchRegionP33221143 faldo:begin ?templateMotifSequenceMatchBeginP33221144 . ?templateMotifSequenceMatchBeginP33221144 faldo:position ?templateMotifSequenceMatchBeginPositionP33221139 ; faldo:reference isoform:P33221-1 . ?templateMotifSequenceProfileAlignmentOperationP33221145 edam:has_input signature:MF_01643 ; rdf:type edam:operation_0300 . ?targetMotifMatch146 faldo:location ?targetMotifMatchRegionMatch147 ; edam:is_output_of ?targetMotifSequenceAlignmentOperationMF_01643149 ; rdf:type edam:data_0869 ; rdf:value ?targetMotifMatchCigarP33221MF_01643140 . ?targetMotifMatchRegionMatch147 faldo:begin ?targetMotifMatchRegionMatchBeginMF_01643148 . ?targetMotifMatchRegionMatchBeginMF_01643148 faldo:position ?targetMotifMatchRegionMatchBeginPositionMF_01643141 ; faldo:reference ?thisSequence . ?targetMotifSequenceAlignmentOperationMF_01643149 edam:has_input signature:MF_01643 ; rdf:type edam:operation_0300 . BIND(STRLEN(REPLACE(SUBSTR(?templateMotifCigarP33221MF_01643138, 1, (STRLEN(?templateMotifCigarP33221MF_01643138) - STRLEN(REPLACE(?templateMotifCigarP33221MF_01643138, CONCAT('^(?:-*[^-]){', STR(((22 - ?templateMotifSequenceMatchBeginPositionP33221139) + 1)), '}'), '')))), '[a-z]', '')) AS ?step1150) . BIND((STRLEN(SUBSTR(?targetMotifMatchCigarP33221MF_01643140, 1, (STRLEN(?targetMotifMatchCigarP33221MF_01643140) - STRLEN(REPLACE(?targetMotifMatchCigarP33221MF_01643140, CONCAT('^(?:[a-z]*(?:[A-Z]|-)){', STR(?step1150), '}'), ''))))) - STRLEN(REPLACE(SUBSTR(?targetMotifMatchCigarP33221MF_01643140, 1, (STRLEN(?targetMotifMatchCigarP33221MF_01643140) - STRLEN(REPLACE(?targetMotifMatchCigarP33221MF_01643140, CONCAT('^(?:[a-z]*(?:[A-Z]|-)){', STR(?step1150), '}'), '')))), '[^-]', ''))) AS ?step2151) . BIND(((?step2151 + ?targetMotifMatchRegionMatchBeginPositionMF_01643141) - 1) AS ?thisPositionOn32) . BIND(STRLEN(REPLACE(SUBSTR(?templateMotifCigarP33221MF_01643138, 1, (STRLEN(?templateMotifCigarP33221MF_01643138) - STRLEN(REPLACE(?templateMotifCigarP33221MF_01643138, CONCAT('^(?:-*[^-]){', STR(((23 - ?templateMotifSequenceMatchBeginPositionP33221139) + 1)), '}'), '')))), '[a-z]', '')) AS ?step1152) . BIND((STRLEN(SUBSTR(?targetMotifMatchCigarP33221MF_01643140, 1, (STRLEN(?targetMotifMatchCigarP33221MF_01643140) - STRLEN(REPLACE(?targetMotifMatchCigarP33221MF_01643140, CONCAT('^(?:[a-z]*(?:[A-Z]|-)){', STR(?step1152), '}'), ''))))) - STRLEN(REPLACE(SUBSTR(?targetMotifMatchCigarP33221MF_01643140, 1, (STRLEN(?targetMotifMatchCigarP33221MF_01643140) - STRLEN(REPLACE(?targetMotifMatchCigarP33221MF_01643140, CONCAT('^(?:[a-z]*(?:[A-Z]|-)){', STR(?step1152), '}'), '')))), '[^-]', ''))) AS ?step2153) . BIND(((?step2153 + ?targetMotifMatchRegionMatchBeginPositionMF_01643141) - 1) AS ?thisPositionOn33) . BIND(?this AS ?pfs1t154) . BIND(URI(CONCAT(STR(?thisSequence), '#position', STR(?thisPositionOn32))) AS ?pfsb29) . BIND(URI(CONCAT(STR(?thisSequence), '#position', STR(?thisPositionOn33))) AS ?pfse30) . FILTER ((SUBSTR(?thisSequenceValue, ?thisPositionOn32, (?thisPositionOn33 - ?thisPositionOn32)) = 'EL')) . BIND(URI(CONCAT(STR(?this), '#MF_01643a28')) AS ?annotation28) . BIND(?this AS ?pfs27) . } OPTIONAL { ?this up:sequence ?thisSequence . ?thisSequence rdf:value ?thisSequenceValue . ?templateMotifMatch159 faldo:location ?templateMotifSequenceMatchRegionP33221160 ; edam:is_output_of ?templateMotifSequenceProfileAlignmentOperationP33221162 ; rdf:type edam:data_0869 ; rdf:value ?templateMotifCigarP33221MF_01643155 . ?templateMotifSequenceMatchRegionP33221160 faldo:begin ?templateMotifSequenceMatchBeginP33221161 . ?templateMotifSequenceMatchBeginP33221161 faldo:position ?templateMotifSequenceMatchBeginPositionP33221156 ; faldo:reference isoform:P33221-1 . ?templateMotifSequenceProfileAlignmentOperationP33221162 edam:has_input signature:MF_01643 ; rdf:type edam:operation_0300 . ?targetMotifMatch163 faldo:location ?targetMotifMatchRegionMatch164 ; edam:is_output_of ?targetMotifSequenceAlignmentOperationMF_01643166 ; rdf:type edam:data_0869 ; rdf:value ?targetMotifMatchCigarP33221MF_01643157 . ?targetMotifMatchRegionMatch164 faldo:begin ?targetMotifMatchRegionMatchBeginMF_01643165 . ?targetMotifMatchRegionMatchBeginMF_01643165 faldo:position ?targetMotifMatchRegionMatchBeginPositionMF_01643158 ; faldo:reference ?thisSequence . ?targetMotifSequenceAlignmentOperationMF_01643166 edam:has_input signature:MF_01643 ; rdf:type edam:operation_0300 . BIND(STRLEN(REPLACE(SUBSTR(?templateMotifCigarP33221MF_01643155, 1, (STRLEN(?templateMotifCigarP33221MF_01643155) - STRLEN(REPLACE(?templateMotifCigarP33221MF_01643155, CONCAT('^(?:-*[^-]){', STR(((362 - ?templateMotifSequenceMatchBeginPositionP33221156) + 1)), '}'), '')))), '[a-z]', '')) AS ?step1167) . BIND((STRLEN(SUBSTR(?targetMotifMatchCigarP33221MF_01643157, 1, (STRLEN(?targetMotifMatchCigarP33221MF_01643157) - STRLEN(REPLACE(?targetMotifMatchCigarP33221MF_01643157, CONCAT('^(?:[a-z]*(?:[A-Z]|-)){', STR(?step1167), '}'), ''))))) - STRLEN(REPLACE(SUBSTR(?targetMotifMatchCigarP33221MF_01643157, 1, (STRLEN(?targetMotifMatchCigarP33221MF_01643157) - STRLEN(REPLACE(?targetMotifMatchCigarP33221MF_01643157, CONCAT('^(?:[a-z]*(?:[A-Z]|-)){', STR(?step1167), '}'), '')))), '[^-]', ''))) AS ?step2168) . BIND(((?step2168 + ?targetMotifMatchRegionMatchBeginPositionMF_01643158) - 1) AS ?thisPositionOn39) . BIND(STRLEN(REPLACE(SUBSTR(?templateMotifCigarP33221MF_01643155, 1, (STRLEN(?templateMotifCigarP33221MF_01643155) - STRLEN(REPLACE(?templateMotifCigarP33221MF_01643155, CONCAT('^(?:-*[^-]){', STR(((363 - ?templateMotifSequenceMatchBeginPositionP33221156) + 1)), '}'), '')))), '[a-z]', '')) AS ?step1169) . BIND((STRLEN(SUBSTR(?targetMotifMatchCigarP33221MF_01643157, 1, (STRLEN(?targetMotifMatchCigarP33221MF_01643157) - STRLEN(REPLACE(?targetMotifMatchCigarP33221MF_01643157, CONCAT('^(?:[a-z]*(?:[A-Z]|-)){', STR(?step1169), '}'), ''))))) - STRLEN(REPLACE(SUBSTR(?targetMotifMatchCigarP33221MF_01643157, 1, (STRLEN(?targetMotifMatchCigarP33221MF_01643157) - STRLEN(REPLACE(?targetMotifMatchCigarP33221MF_01643157, CONCAT('^(?:[a-z]*(?:[A-Z]|-)){', STR(?step1169), '}'), '')))), '[^-]', ''))) AS ?step2170) . BIND(((?step2170 + ?targetMotifMatchRegionMatchBeginPositionMF_01643158) - 1) AS ?thisPositionOn40) . BIND(?this AS ?pfs1t171) . BIND(URI(CONCAT(STR(?thisSequence), '#position', STR(?thisPositionOn39))) AS ?pfsb36) . BIND(URI(CONCAT(STR(?thisSequence), '#position', STR(?thisPositionOn40))) AS ?pfse37) . FILTER ((SUBSTR(?thisSequenceValue, ?thisPositionOn39, (?thisPositionOn40 - ?thisPositionOn39)) = 'RR')) . BIND(URI(CONCAT(STR(?this), '#MF_01643a35')) AS ?annotation35) . BIND(?this AS ?pfs34) . } OPTIONAL { ?this up:sequence ?thisSequence . ?thisSequence rdf:value ?thisSequenceValue . ?templateMotifMatch176 faldo:location ?templateMotifSequenceMatchRegionP33221177 ; edam:is_output_of ?templateMotifSequenceProfileAlignmentOperationP33221179 ; rdf:type edam:data_0869 ; rdf:value ?templateMotifCigarP33221MF_01643172 . ?templateMotifSequenceMatchRegionP33221177 faldo:begin ?templateMotifSequenceMatchBeginP33221178 . ?templateMotifSequenceMatchBeginP33221178 faldo:position ?templateMotifSequenceMatchBeginPositionP33221173 ; faldo:reference isoform:P33221-1 . ?templateMotifSequenceProfileAlignmentOperationP33221179 edam:has_input signature:MF_01643 ; rdf:type edam:operation_0300 . ?targetMotifMatch180 faldo:location ?targetMotifMatchRegionMatch181 ; edam:is_output_of ?targetMotifSequenceAlignmentOperationMF_01643183 ; rdf:type edam:data_0869 ; rdf:value ?targetMotifMatchCigarP33221MF_01643174 . ?targetMotifMatchRegionMatch181 faldo:begin ?targetMotifMatchRegionMatchBeginMF_01643182 . ?targetMotifMatchRegionMatchBeginMF_01643182 faldo:position ?targetMotifMatchRegionMatchBeginPositionMF_01643175 ; faldo:reference ?thisSequence . ?targetMotifSequenceAlignmentOperationMF_01643183 edam:has_input signature:MF_01643 ; rdf:type edam:operation_0300 . BIND(STRLEN(REPLACE(SUBSTR(?templateMotifCigarP33221MF_01643172, 1, (STRLEN(?templateMotifCigarP33221MF_01643172) - STRLEN(REPLACE(?templateMotifCigarP33221MF_01643172, CONCAT('^(?:-*[^-]){', STR(((267 - ?templateMotifSequenceMatchBeginPositionP33221173) + 1)), '}'), '')))), '[a-z]', '')) AS ?step1184) . BIND((STRLEN(SUBSTR(?targetMotifMatchCigarP33221MF_01643174, 1, (STRLEN(?targetMotifMatchCigarP33221MF_01643174) - STRLEN(REPLACE(?targetMotifMatchCigarP33221MF_01643174, CONCAT('^(?:[a-z]*(?:[A-Z]|-)){', STR(?step1184), '}'), ''))))) - STRLEN(REPLACE(SUBSTR(?targetMotifMatchCigarP33221MF_01643174, 1, (STRLEN(?targetMotifMatchCigarP33221MF_01643174) - STRLEN(REPLACE(?targetMotifMatchCigarP33221MF_01643174, CONCAT('^(?:[a-z]*(?:[A-Z]|-)){', STR(?step1184), '}'), '')))), '[^-]', ''))) AS ?step2185) . BIND(((?step2185 + ?targetMotifMatchRegionMatchBeginPositionMF_01643175) - 1) AS ?thisPositionOn46) . BIND(?thisPositionOn46 AS ?thisPositionOn47) . BIND(?this AS ?pfs1t186) . BIND(URI(CONCAT(STR(?thisSequence), '#position', STR(?thisPositionOn46))) AS ?pfsb43) . BIND(URI(CONCAT(STR(?thisSequence), '#position', STR(?thisPositionOn47))) AS ?pfse44) . FILTER ((SUBSTR(?thisSequenceValue, ?thisPositionOn46, 1) = 'E')) . BIND(URI(CONCAT(STR(?this), '#MF_01643a42')) AS ?annotation42) . BIND(?this AS ?pfs41) . } OPTIONAL { ?this up:sequence ?thisSequence . ?thisSequence rdf:value ?thisSequenceValue . ?templateMotifMatch191 faldo:location ?templateMotifSequenceMatchRegionP33221192 ; edam:is_output_of ?templateMotifSequenceProfileAlignmentOperationP33221194 ; rdf:type edam:data_0869 ; rdf:value ?templateMotifCigarP33221MF_01643187 . ?templateMotifSequenceMatchRegionP33221192 faldo:begin ?templateMotifSequenceMatchBeginP33221193 . ?templateMotifSequenceMatchBeginP33221193 faldo:position ?templateMotifSequenceMatchBeginPositionP33221188 ; faldo:reference isoform:P33221-1 . ?templateMotifSequenceProfileAlignmentOperationP33221194 edam:has_input signature:MF_01643 ; rdf:type edam:operation_0300 . ?targetMotifMatch195 faldo:location ?targetMotifMatchRegionMatch196 ; edam:is_output_of ?targetMotifSequenceAlignmentOperationMF_01643198 ; rdf:type edam:data_0869 ; rdf:value ?targetMotifMatchCigarP33221MF_01643189 . ?targetMotifMatchRegionMatch196 faldo:begin ?targetMotifMatchRegionMatchBeginMF_01643197 . ?targetMotifMatchRegionMatchBeginMF_01643197 faldo:position ?targetMotifMatchRegionMatchBeginPositionMF_01643190 ; faldo:reference ?thisSequence . ?targetMotifSequenceAlignmentOperationMF_01643198 edam:has_input signature:MF_01643 ; rdf:type edam:operation_0300 . BIND(STRLEN(REPLACE(SUBSTR(?templateMotifCigarP33221MF_01643187, 1, (STRLEN(?templateMotifCigarP33221MF_01643187) - STRLEN(REPLACE(?templateMotifCigarP33221MF_01643187, CONCAT('^(?:-*[^-]){', STR(((279 - ?templateMotifSequenceMatchBeginPositionP33221188) + 1)), '}'), '')))), '[a-z]', '')) AS ?step1199) . BIND((STRLEN(SUBSTR(?targetMotifMatchCigarP33221MF_01643189, 1, (STRLEN(?targetMotifMatchCigarP33221MF_01643189) - STRLEN(REPLACE(?targetMotifMatchCigarP33221MF_01643189, CONCAT('^(?:[a-z]*(?:[A-Z]|-)){', STR(?step1199), '}'), ''))))) - STRLEN(REPLACE(SUBSTR(?targetMotifMatchCigarP33221MF_01643189, 1, (STRLEN(?targetMotifMatchCigarP33221MF_01643189) - STRLEN(REPLACE(?targetMotifMatchCigarP33221MF_01643189, CONCAT('^(?:[a-z]*(?:[A-Z]|-)){', STR(?step1199), '}'), '')))), '[^-]', ''))) AS ?step2200) . BIND(((?step2200 + ?targetMotifMatchRegionMatchBeginPositionMF_01643190) - 1) AS ?thisPositionOn53) . BIND(?thisPositionOn53 AS ?thisPositionOn54) . BIND(?this AS ?pfs1t201) . BIND(URI(CONCAT(STR(?thisSequence), '#position', STR(?thisPositionOn53))) AS ?pfsb50) . BIND(URI(CONCAT(STR(?thisSequence), '#position', STR(?thisPositionOn54))) AS ?pfse51) . FILTER (REGEX('[ED]', SUBSTR(?thisSequenceValue, ?thisPositionOn53, 1))) . BIND(URI(CONCAT(STR(?this), '#MF_01643a49')) AS ?annotation49) . BIND(?this AS ?pfs48) . } OPTIONAL { ?this up:sequence ?thisSequence . ?thisSequence rdf:value ?thisSequenceValue . ?templateMotifMatch206 faldo:location ?templateMotifSequenceMatchRegionP33221207 ; edam:is_output_of ?templateMotifSequenceProfileAlignmentOperationP33221209 ; rdf:type edam:data_0869 ; rdf:value ?templateMotifCigarP33221MF_01643202 . ?templateMotifSequenceMatchRegionP33221207 faldo:begin ?templateMotifSequenceMatchBeginP33221208 . ?templateMotifSequenceMatchBeginP33221208 faldo:position ?templateMotifSequenceMatchBeginPositionP33221203 ; faldo:reference isoform:P33221-1 . ?templateMotifSequenceProfileAlignmentOperationP33221209 edam:has_input signature:MF_01643 ; rdf:type edam:operation_0300 . ?targetMotifMatch210 faldo:location ?targetMotifMatchRegionMatch211 ; edam:is_output_of ?targetMotifSequenceAlignmentOperationMF_01643213 ; rdf:type edam:data_0869 ; rdf:value ?targetMotifMatchCigarP33221MF_01643204 . ?targetMotifMatchRegionMatch211 faldo:begin ?targetMotifMatchRegionMatchBeginMF_01643212 . ?targetMotifMatchRegionMatchBeginMF_01643212 faldo:position ?targetMotifMatchRegionMatchBeginPositionMF_01643205 ; faldo:reference ?thisSequence . ?targetMotifSequenceAlignmentOperationMF_01643213 edam:has_input signature:MF_01643 ; rdf:type edam:operation_0300 . BIND(STRLEN(REPLACE(SUBSTR(?templateMotifCigarP33221MF_01643202, 1, (STRLEN(?templateMotifCigarP33221MF_01643202) - STRLEN(REPLACE(?templateMotifCigarP33221MF_01643202, CONCAT('^(?:-*[^-]){', STR(((82 - ?templateMotifSequenceMatchBeginPositionP33221203) + 1)), '}'), '')))), '[a-z]', '')) AS ?step1214) . BIND((STRLEN(SUBSTR(?targetMotifMatchCigarP33221MF_01643204, 1, (STRLEN(?targetMotifMatchCigarP33221MF_01643204) - STRLEN(REPLACE(?targetMotifMatchCigarP33221MF_01643204, CONCAT('^(?:[a-z]*(?:[A-Z]|-)){', STR(?step1214), '}'), ''))))) - STRLEN(REPLACE(SUBSTR(?targetMotifMatchCigarP33221MF_01643204, 1, (STRLEN(?targetMotifMatchCigarP33221MF_01643204) - STRLEN(REPLACE(?targetMotifMatchCigarP33221MF_01643204, CONCAT('^(?:[a-z]*(?:[A-Z]|-)){', STR(?step1214), '}'), '')))), '[^-]', ''))) AS ?step2215) . BIND(((?step2215 + ?targetMotifMatchRegionMatchBeginPositionMF_01643205) - 1) AS ?thisPositionOn60) . BIND(?thisPositionOn60 AS ?thisPositionOn61) . BIND(?this AS ?pfs1t216) . BIND(URI(CONCAT(STR(?thisSequence), '#position', STR(?thisPositionOn60))) AS ?pfsb57) . BIND(URI(CONCAT(STR(?thisSequence), '#position', STR(?thisPositionOn61))) AS ?pfse58) . FILTER ((SUBSTR(?thisSequenceValue, ?thisPositionOn60, 1) = 'E')) . BIND(URI(CONCAT(STR(?this), '#MF_01643a56')) AS ?annotation56) . BIND(?this AS ?pfs55) . } OPTIONAL { ?this up:sequence ?thisSequence . ?thisSequence rdf:value ?thisSequenceValue . ?templateMotifMatch221 faldo:location ?templateMotifSequenceMatchRegionP33221222 ; edam:is_output_of ?templateMotifSequenceProfileAlignmentOperationP33221224 ; rdf:type edam:data_0869 ; rdf:value ?templateMotifCigarP33221MF_01643217 . ?templateMotifSequenceMatchRegionP33221222 faldo:begin ?templateMotifSequenceMatchBeginP33221223 . ?templateMotifSequenceMatchBeginP33221223 faldo:position ?templateMotifSequenceMatchBeginPositionP33221218 ; faldo:reference isoform:P33221-1 . ?templateMotifSequenceProfileAlignmentOperationP33221224 edam:has_input signature:MF_01643 ; rdf:type edam:operation_0300 . ?targetMotifMatch225 faldo:location ?targetMotifMatchRegionMatch226 ; edam:is_output_of ?targetMotifSequenceAlignmentOperationMF_01643228 ; rdf:type edam:data_0869 ; rdf:value ?targetMotifMatchCigarP33221MF_01643219 . ?targetMotifMatchRegionMatch226 faldo:begin ?targetMotifMatchRegionMatchBeginMF_01643227 . ?targetMotifMatchRegionMatchBeginMF_01643227 faldo:position ?targetMotifMatchRegionMatchBeginPositionMF_01643220 ; faldo:reference ?thisSequence . ?targetMotifSequenceAlignmentOperationMF_01643228 edam:has_input signature:MF_01643 ; rdf:type edam:operation_0300 . BIND(STRLEN(REPLACE(SUBSTR(?templateMotifCigarP33221MF_01643217, 1, (STRLEN(?templateMotifCigarP33221MF_01643217) - STRLEN(REPLACE(?templateMotifCigarP33221MF_01643217, CONCAT('^(?:-*[^-]){', STR(((114 - ?templateMotifSequenceMatchBeginPositionP33221218) + 1)), '}'), '')))), '[a-z]', '')) AS ?step1229) . BIND((STRLEN(SUBSTR(?targetMotifMatchCigarP33221MF_01643219, 1, (STRLEN(?targetMotifMatchCigarP33221MF_01643219) - STRLEN(REPLACE(?targetMotifMatchCigarP33221MF_01643219, CONCAT('^(?:[a-z]*(?:[A-Z]|-)){', STR(?step1229), '}'), ''))))) - STRLEN(REPLACE(SUBSTR(?targetMotifMatchCigarP33221MF_01643219, 1, (STRLEN(?targetMotifMatchCigarP33221MF_01643219) - STRLEN(REPLACE(?targetMotifMatchCigarP33221MF_01643219, CONCAT('^(?:[a-z]*(?:[A-Z]|-)){', STR(?step1229), '}'), '')))), '[^-]', ''))) AS ?step2230) . BIND(((?step2230 + ?targetMotifMatchRegionMatchBeginPositionMF_01643220) - 1) AS ?thisPositionOn67) . BIND(?thisPositionOn67 AS ?thisPositionOn68) . BIND(?this AS ?pfs1t231) . BIND(URI(CONCAT(STR(?thisSequence), '#position', STR(?thisPositionOn67))) AS ?pfsb64) . BIND(URI(CONCAT(STR(?thisSequence), '#position', STR(?thisPositionOn68))) AS ?pfse65) . FILTER ((SUBSTR(?thisSequenceValue, ?thisPositionOn67, 1) = 'R')) . BIND(URI(CONCAT(STR(?this), '#MF_01643a63')) AS ?annotation63) . BIND(?this AS ?pfs62) . } OPTIONAL { ?this up:sequence ?thisSequence . ?thisSequence rdf:value ?thisSequenceValue . ?templateMotifMatch236 faldo:location ?templateMotifSequenceMatchRegionP33221237 ; edam:is_output_of ?templateMotifSequenceProfileAlignmentOperationP33221239 ; rdf:type edam:data_0869 ; rdf:value ?templateMotifCigarP33221MF_01643232 . ?templateMotifSequenceMatchRegionP33221237 faldo:begin ?templateMotifSequenceMatchBeginP33221238 . ?templateMotifSequenceMatchBeginP33221238 faldo:position ?templateMotifSequenceMatchBeginPositionP33221233 ; faldo:reference isoform:P33221-1 . ?templateMotifSequenceProfileAlignmentOperationP33221239 edam:has_input signature:MF_01643 ; rdf:type edam:operation_0300 . ?targetMotifMatch240 faldo:location ?targetMotifMatchRegionMatch241 ; edam:is_output_of ?targetMotifSequenceAlignmentOperationMF_01643243 ; rdf:type edam:data_0869 ; rdf:value ?targetMotifMatchCigarP33221MF_01643234 . ?targetMotifMatchRegionMatch241 faldo:begin ?targetMotifMatchRegionMatchBeginMF_01643242 . ?targetMotifMatchRegionMatchBeginMF_01643242 faldo:position ?targetMotifMatchRegionMatchBeginPositionMF_01643235 ; faldo:reference ?thisSequence . ?targetMotifSequenceAlignmentOperationMF_01643243 edam:has_input signature:MF_01643 ; rdf:type edam:operation_0300 . BIND(STRLEN(REPLACE(SUBSTR(?templateMotifCigarP33221MF_01643232, 1, (STRLEN(?templateMotifCigarP33221MF_01643232) - STRLEN(REPLACE(?templateMotifCigarP33221MF_01643232, CONCAT('^(?:-*[^-]){', STR(((155 - ?templateMotifSequenceMatchBeginPositionP33221233) + 1)), '}'), '')))), '[a-z]', '')) AS ?step1244) . BIND((STRLEN(SUBSTR(?targetMotifMatchCigarP33221MF_01643234, 1, (STRLEN(?targetMotifMatchCigarP33221MF_01643234) - STRLEN(REPLACE(?targetMotifMatchCigarP33221MF_01643234, CONCAT('^(?:[a-z]*(?:[A-Z]|-)){', STR(?step1244), '}'), ''))))) - STRLEN(REPLACE(SUBSTR(?targetMotifMatchCigarP33221MF_01643234, 1, (STRLEN(?targetMotifMatchCigarP33221MF_01643234) - STRLEN(REPLACE(?targetMotifMatchCigarP33221MF_01643234, CONCAT('^(?:[a-z]*(?:[A-Z]|-)){', STR(?step1244), '}'), '')))), '[^-]', ''))) AS ?step2245) . BIND(((?step2245 + ?targetMotifMatchRegionMatchBeginPositionMF_01643235) - 1) AS ?thisPositionOn74) . BIND(?thisPositionOn74 AS ?thisPositionOn75) . BIND(?this AS ?pfs1t246) . BIND(URI(CONCAT(STR(?thisSequence), '#position', STR(?thisPositionOn74))) AS ?pfsb71) . BIND(URI(CONCAT(STR(?thisSequence), '#position', STR(?thisPositionOn75))) AS ?pfse72) . FILTER ((SUBSTR(?thisSequenceValue, ?thisPositionOn74, 1) = 'K')) . BIND(URI(CONCAT(STR(?this), '#MF_01643a70')) AS ?annotation70) . BIND(?this AS ?pfs69) . } OPTIONAL { ?this up:sequence ?thisSequence . ?thisSequence rdf:value ?thisSequenceValue . ?templateMotifMatch251 faldo:location ?templateMotifSequenceMatchRegionP33221252 ; edam:is_output_of ?templateMotifSequenceProfileAlignmentOperationP33221254 ; rdf:type edam:data_0869 ; rdf:value ?templateMotifCigarP33221MF_01643247 . ?templateMotifSequenceMatchRegionP33221252 faldo:begin ?templateMotifSequenceMatchBeginP33221253 . ?templateMotifSequenceMatchBeginP33221253 faldo:position ?templateMotifSequenceMatchBeginPositionP33221248 ; faldo:reference isoform:P33221-1 . ?templateMotifSequenceProfileAlignmentOperationP33221254 edam:has_input signature:MF_01643 ; rdf:type edam:operation_0300 . ?targetMotifMatch255 faldo:location ?targetMotifMatchRegionMatch256 ; edam:is_output_of ?targetMotifSequenceAlignmentOperationMF_01643258 ; rdf:type edam:data_0869 ; rdf:value ?targetMotifMatchCigarP33221MF_01643249 . ?targetMotifMatchRegionMatch256 faldo:begin ?targetMotifMatchRegionMatchBeginMF_01643257 . ?targetMotifMatchRegionMatchBeginMF_01643257 faldo:position ?targetMotifMatchRegionMatchBeginPositionMF_01643250 ; faldo:reference ?thisSequence . ?targetMotifSequenceAlignmentOperationMF_01643258 edam:has_input signature:MF_01643 ; rdf:type edam:operation_0300 . BIND(STRLEN(REPLACE(SUBSTR(?templateMotifCigarP33221MF_01643247, 1, (STRLEN(?templateMotifCigarP33221MF_01643247) - STRLEN(REPLACE(?templateMotifCigarP33221MF_01643247, CONCAT('^(?:-*[^-]){', STR(((203 - ?templateMotifSequenceMatchBeginPositionP33221248) + 1)), '}'), '')))), '[a-z]', '')) AS ?step1259) . BIND((STRLEN(SUBSTR(?targetMotifMatchCigarP33221MF_01643249, 1, (STRLEN(?targetMotifMatchCigarP33221MF_01643249) - STRLEN(REPLACE(?targetMotifMatchCigarP33221MF_01643249, CONCAT('^(?:[a-z]*(?:[A-Z]|-)){', STR(?step1259), '}'), ''))))) - STRLEN(REPLACE(SUBSTR(?targetMotifMatchCigarP33221MF_01643249, 1, (STRLEN(?targetMotifMatchCigarP33221MF_01643249) - STRLEN(REPLACE(?targetMotifMatchCigarP33221MF_01643249, CONCAT('^(?:[a-z]*(?:[A-Z]|-)){', STR(?step1259), '}'), '')))), '[^-]', ''))) AS ?step2260) . BIND(((?step2260 + ?targetMotifMatchRegionMatchBeginPositionMF_01643250) - 1) AS ?thisPositionOn81) . BIND(?thisPositionOn81 AS ?thisPositionOn82) . BIND(?this AS ?pfs1t261) . BIND(URI(CONCAT(STR(?thisSequence), '#position', STR(?thisPositionOn81))) AS ?pfsb78) . BIND(URI(CONCAT(STR(?thisSequence), '#position', STR(?thisPositionOn82))) AS ?pfse79) . FILTER ((SUBSTR(?thisSequenceValue, ?thisPositionOn81, 1) = 'E')) . BIND(URI(CONCAT(STR(?this), '#MF_01643a77')) AS ?annotation77) . BIND(?this AS ?pfs76) . } OPTIONAL { ?this up:sequence ?thisSequence . ?thisSequence rdf:value ?thisSequenceValue . ?templateMotifMatch266 faldo:location ?templateMotifSequenceMatchRegionP33221267 ; edam:is_output_of ?templateMotifSequenceProfileAlignmentOperationP33221269 ; rdf:type edam:data_0869 ; rdf:value ?templateMotifCigarP33221MF_01643262 . ?templateMotifSequenceMatchRegionP33221267 faldo:begin ?templateMotifSequenceMatchBeginP33221268 . ?templateMotifSequenceMatchBeginP33221268 faldo:position ?templateMotifSequenceMatchBeginPositionP33221263 ; faldo:reference isoform:P33221-1 . ?templateMotifSequenceProfileAlignmentOperationP33221269 edam:has_input signature:MF_01643 ; rdf:type edam:operation_0300 . ?targetMotifMatch270 faldo:location ?targetMotifMatchRegionMatch271 ; edam:is_output_of ?targetMotifSequenceAlignmentOperationMF_01643273 ; rdf:type edam:data_0869 ; rdf:value ?targetMotifMatchCigarP33221MF_01643264 . ?targetMotifMatchRegionMatch271 faldo:begin ?targetMotifMatchRegionMatchBeginMF_01643272 . ?targetMotifMatchRegionMatchBeginMF_01643272 faldo:position ?targetMotifMatchRegionMatchBeginPositionMF_01643265 ; faldo:reference ?thisSequence . ?targetMotifSequenceAlignmentOperationMF_01643273 edam:has_input signature:MF_01643 ; rdf:type edam:operation_0300 . BIND(STRLEN(REPLACE(SUBSTR(?templateMotifCigarP33221MF_01643262, 1, (STRLEN(?templateMotifCigarP33221MF_01643262) - STRLEN(REPLACE(?templateMotifCigarP33221MF_01643262, CONCAT('^(?:-*[^-]){', STR(((286 - ?templateMotifSequenceMatchBeginPositionP33221263) + 1)), '}'), '')))), '[a-z]', '')) AS ?step1274) . BIND((STRLEN(SUBSTR(?targetMotifMatchCigarP33221MF_01643264, 1, (STRLEN(?targetMotifMatchCigarP33221MF_01643264) - STRLEN(REPLACE(?targetMotifMatchCigarP33221MF_01643264, CONCAT('^(?:[a-z]*(?:[A-Z]|-)){', STR(?step1274), '}'), ''))))) - STRLEN(REPLACE(SUBSTR(?targetMotifMatchCigarP33221MF_01643264, 1, (STRLEN(?targetMotifMatchCigarP33221MF_01643264) - STRLEN(REPLACE(?targetMotifMatchCigarP33221MF_01643264, CONCAT('^(?:[a-z]*(?:[A-Z]|-)){', STR(?step1274), '}'), '')))), '[^-]', ''))) AS ?step2275) . BIND(((?step2275 + ?targetMotifMatchRegionMatchBeginPositionMF_01643265) - 1) AS ?thisPositionOn88) . BIND(?thisPositionOn88 AS ?thisPositionOn89) . BIND(?this AS ?pfs1t276) . BIND(URI(CONCAT(STR(?thisSequence), '#position', STR(?thisPositionOn88))) AS ?pfsb85) . BIND(URI(CONCAT(STR(?thisSequence), '#position', STR(?thisPositionOn89))) AS ?pfse86) . FILTER ((SUBSTR(?thisSequenceValue, ?thisPositionOn88, 1) = 'D')) . BIND(URI(CONCAT(STR(?this), '#MF_01643a84')) AS ?annotation84) . BIND(?this AS ?pfs83) . } OPTIONAL { ?this up:sequence ?thisSequence . ?thisSequence rdf:value ?thisSequenceValue . ?templateMotifMatch281 faldo:location ?templateMotifSequenceMatchRegionP33221282 ; edam:is_output_of ?templateMotifSequenceProfileAlignmentOperationP33221284 ; rdf:type edam:data_0869 ; rdf:value ?templateMotifCigarP33221MF_01643277 . ?templateMotifSequenceMatchRegionP33221282 faldo:begin ?templateMotifSequenceMatchBeginP33221283 . ?templateMotifSequenceMatchBeginP33221283 faldo:position ?templateMotifSequenceMatchBeginPositionP33221278 ; faldo:reference isoform:P33221-1 . ?templateMotifSequenceProfileAlignmentOperationP33221284 edam:has_input signature:MF_01643 ; rdf:type edam:operation_0300 . ?targetMotifMatch285 faldo:location ?targetMotifMatchRegionMatch286 ; edam:is_output_of ?targetMotifSequenceAlignmentOperationMF_01643288 ; rdf:type edam:data_0869 ; rdf:value ?targetMotifMatchCigarP33221MF_01643279 . ?targetMotifMatchRegionMatch286 faldo:begin ?targetMotifMatchRegionMatchBeginMF_01643287 . ?targetMotifMatchRegionMatchBeginMF_01643287 faldo:position ?targetMotifMatchRegionMatchBeginPositionMF_01643280 ; faldo:reference ?thisSequence . ?targetMotifSequenceAlignmentOperationMF_01643288 edam:has_input signature:MF_01643 ; rdf:type edam:operation_0300 . BIND(STRLEN(REPLACE(SUBSTR(?templateMotifCigarP33221MF_01643277, 1, (STRLEN(?templateMotifCigarP33221MF_01643277) - STRLEN(REPLACE(?templateMotifCigarP33221MF_01643277, CONCAT('^(?:-*[^-]){', STR(((355 - ?templateMotifSequenceMatchBeginPositionP33221278) + 1)), '}'), '')))), '[a-z]', '')) AS ?step1289) . BIND((STRLEN(SUBSTR(?targetMotifMatchCigarP33221MF_01643279, 1, (STRLEN(?targetMotifMatchCigarP33221MF_01643279) - STRLEN(REPLACE(?targetMotifMatchCigarP33221MF_01643279, CONCAT('^(?:[a-z]*(?:[A-Z]|-)){', STR(?step1289), '}'), ''))))) - STRLEN(REPLACE(SUBSTR(?targetMotifMatchCigarP33221MF_01643279, 1, (STRLEN(?targetMotifMatchCigarP33221MF_01643279) - STRLEN(REPLACE(?targetMotifMatchCigarP33221MF_01643279, CONCAT('^(?:[a-z]*(?:[A-Z]|-)){', STR(?step1289), '}'), '')))), '[^-]', ''))) AS ?step2290) . BIND(((?step2290 + ?targetMotifMatchRegionMatchBeginPositionMF_01643280) - 1) AS ?thisPositionOn95) . BIND(?thisPositionOn95 AS ?thisPositionOn96) . BIND(?this AS ?pfs1t291) . BIND(URI(CONCAT(STR(?thisSequence), '#position', STR(?thisPositionOn95))) AS ?pfsb92) . BIND(URI(CONCAT(STR(?thisSequence), '#position', STR(?thisPositionOn96))) AS ?pfse93) . FILTER ((SUBSTR(?thisSequenceValue, ?thisPositionOn95, 1) = 'K')) . BIND(URI(CONCAT(STR(?this), '#MF_01643a91')) AS ?annotation91) . BIND(?this AS ?pfs90) . } OPTIONAL { ?this up:sequence ?thisSequence . ?thisSequence rdf:value ?thisSequenceValue . ?templateMotifMatch296 faldo:location ?templateMotifSequenceMatchRegionP33221297 ; edam:is_output_of ?templateMotifSequenceProfileAlignmentOperationP33221299 ; rdf:type edam:data_0869 ; rdf:value ?templateMotifCigarP33221MF_01643292 . ?templateMotifSequenceMatchRegionP33221297 faldo:begin ?templateMotifSequenceMatchBeginP33221298 . ?templateMotifSequenceMatchBeginP33221298 faldo:position ?templateMotifSequenceMatchBeginPositionP33221293 ; faldo:reference isoform:P33221-1 . ?templateMotifSequenceProfileAlignmentOperationP33221299 edam:has_input signature:MF_01643 ; rdf:type edam:operation_0300 . ?targetMotifMatch300 faldo:location ?targetMotifMatchRegionMatch301 ; edam:is_output_of ?targetMotifSequenceAlignmentOperationMF_01643303 ; rdf:type edam:data_0869 ; rdf:value ?targetMotifMatchCigarP33221MF_01643294 . ?targetMotifMatchRegionMatch301 faldo:begin ?targetMotifMatchRegionMatchBeginMF_01643302 . ?targetMotifMatchRegionMatchBeginMF_01643302 faldo:position ?targetMotifMatchRegionMatchBeginPositionMF_01643295 ; faldo:reference ?thisSequence . ?targetMotifSequenceAlignmentOperationMF_01643303 edam:has_input signature:MF_01643 ; rdf:type edam:operation_0300 . ?this rdfs:seeAlso <https://purl.expasy.org/prosite/signature/PS50975>. BIND(STRLEN(REPLACE(SUBSTR(?templateMotifCigarP33221MF_01643292, 1, (STRLEN(?templateMotifCigarP33221MF_01643292) - STRLEN(REPLACE(?templateMotifCigarP33221MF_01643292, CONCAT('^(?:-*[^-]){', STR(((119 - ?templateMotifSequenceMatchBeginPositionP33221293) + 1)), '}'), '')))), '[a-z]', '')) AS ?step1304) . BIND((STRLEN(SUBSTR(?targetMotifMatchCigarP33221MF_01643294, 1, (STRLEN(?targetMotifMatchCigarP33221MF_01643294) - STRLEN(REPLACE(?targetMotifMatchCigarP33221MF_01643294, CONCAT('^(?:[a-z]*(?:[A-Z]|-)){', STR(?step1304), '}'), ''))))) - STRLEN(REPLACE(SUBSTR(?targetMotifMatchCigarP33221MF_01643294, 1, (STRLEN(?targetMotifMatchCigarP33221MF_01643294) - STRLEN(REPLACE(?targetMotifMatchCigarP33221MF_01643294, CONCAT('^(?:[a-z]*(?:[A-Z]|-)){', STR(?step1304), '}'), '')))), '[^-]', ''))) AS ?step2305) . BIND(((?step2305 + ?targetMotifMatchRegionMatchBeginPositionMF_01643295) - 1) AS ?thisPositionOn101) . BIND(STRLEN(REPLACE(SUBSTR(?templateMotifCigarP33221MF_01643292, 1, (STRLEN(?templateMotifCigarP33221MF_01643292) - STRLEN(REPLACE(?templateMotifCigarP33221MF_01643292, CONCAT('^(?:-*[^-]){', STR(((308 - ?templateMotifSequenceMatchBeginPositionP33221293) + 1)), '}'), '')))), '[a-z]', '')) AS ?step1306) . BIND((STRLEN(SUBSTR(?targetMotifMatchCigarP33221MF_01643294, 1, (STRLEN(?targetMotifMatchCigarP33221MF_01643294) - STRLEN(REPLACE(?targetMotifMatchCigarP33221MF_01643294, CONCAT('^(?:[a-z]*(?:[A-Z]|-)){', STR(?step1306), '}'), ''))))) - STRLEN(REPLACE(SUBSTR(?targetMotifMatchCigarP33221MF_01643294, 1, (STRLEN(?targetMotifMatchCigarP33221MF_01643294) - STRLEN(REPLACE(?targetMotifMatchCigarP33221MF_01643294, CONCAT('^(?:[a-z]*(?:[A-Z]|-)){', STR(?step1306), '}'), '')))), '[^-]', ''))) AS ?step2307) . BIND(((?step2307 + ?targetMotifMatchRegionMatchBeginPositionMF_01643295) - 1) AS ?thisPositionOn102) . BIND(?this AS ?pfs2t308) . BIND(URI(CONCAT(STR(?thisSequence), '#position', STR(?thisPositionOn101))) AS ?pfsb99) . BIND(URI(CONCAT(STR(?thisSequence), '#position', STR(?thisPositionOn102))) AS ?pfse100) . FILTER ((BOUND(?thisPositionOn101) && BOUND(?thisPositionOn102))) . BIND(URI(CONCAT(STR(?this), '#MF_01643a98')) AS ?annotation98) . BIND(?this AS ?pfs97) . } }