CONSTRUCT { _:590889 up:source unirule:MF_01644 . _:590890 up:source unirule:MF_01644 . _:590891 up:source unirule:MF_01644 . _:590892 up:source unirule:MF_01644 . _:590893 up:source unirule:MF_01644 . _:590894 up:source unirule:MF_01644 . _:590895 up:source unirule:MF_01644 . _:590896 up:source unirule:MF_01644 . _:590897 up:source unirule:MF_01644 . _:590898 up:source unirule:MF_01644 . _:590899 up:source unirule:MF_01644 . _:590900 up:source unirule:MF_01644 . _:590901 up:source unirule:MF_01644 . _:590902 up:source unirule:MF_01644 . _:590903 up:source unirule:MF_01644 . _:590904 up:source unirule:MF_01644 . _:590905 up:source unirule:MF_01644 . _:590906 up:source unirule:MF_01644 . _:590907 up:source unirule:MF_01644 . _:590908 up:source unirule:MF_01644 . _:590909 up:source unirule:MF_01644 . _:590910 up:source unirule:MF_01644 . _:590911 up:source unirule:MF_01644 . ?this up:alternativeName ?name1 ; up:annotation ?annotation3 , ?annotation4 , ?annotation6 , ?annotation7 , ?annotation8 , ?annotation9 ; up:classifiedWith GO:0016812 , keyword:378 , keyword:479 ; up:recommendedName ?name0 . ?name0 up:ecName '3.5.2.-' ; up:fullName 'D-phenylhydantoinase' ; rdf:type up:Structured_Name . ?name1 up:fullName 'Hydantoin-utilizing enzyme HyuA' ; rdf:type up:Structured_Name . ?gene2 skos:prefLabel 'hyuA' . ?annotation3 a up:Function_Annotation ; rdfs:comment "Catalyzes the stereospecific hydrolysis of the cyclic amide bond of D-hydantoin derivatives with an aromatic side chains at the 5'-position. Has no activity on dihydropyrimidines. The physiological function is unknown." . ?annotation4 up:activity ?activity5 ; rdf:type up:Catalytic_Activity_Annotation . ?activity5 up:catalyticActivity <http://rdf.rhea-db.org/51664>. ?annotation6 up:cofactor chebi:60240 ; rdf:type up:Cofactor_Annotation ; rdfs:comment 'Binds 2 divalent metal cations per subunit.' . ?annotation7 a up:Subunit_Annotation ; rdfs:comment 'Homotetramer.' . ?annotation8 a up:PTM_Annotation ; rdfs:comment 'Carboxylation allows a single lysine to coordinate two divalent metal cations.' . ?annotation9 a up:Similarity_Annotation ; rdfs:comment 'Belongs to the metallo-dependent hydrolases superfamily. Hydantoinase/dihydropyrimidinase family.' . ?pfs10 up:annotation ?annotation11 . ?annotation11 faldo:begin ?pfsb12 ; faldo:end ?pfse13 ; up:ligand ?ligand14 ; rdf:type up:Binding_Site_Annotation . ?pfsb12 faldo:position ?thisPositionOn15 ; rdf:type faldo:ExactPosition . ?pfse13 faldo:position ?thisPositionOn16 ; rdf:type faldo:ExactPosition . ?ligand14 rdfs:subClassOf chebi:60240 . ?pfs17 up:annotation ?annotation18 . ?annotation18 faldo:begin ?pfsb19 ; faldo:end ?pfse20 ; up:ligand ?ligand21 ; rdf:type up:Binding_Site_Annotation . ?pfsb19 faldo:position ?thisPositionOn22 ; rdf:type faldo:ExactPosition . ?pfse20 faldo:position ?thisPositionOn23 ; rdf:type faldo:ExactPosition . ?ligand21 rdfs:subClassOf chebi:60240 . ?pfs24 up:annotation ?annotation25 . ?annotation25 faldo:begin ?pfsb26 ; faldo:end ?pfse27 ; up:ligand ?ligand28 ; rdf:type up:Binding_Site_Annotation ; rdfs:comment 'via carbamate group' . ?pfsb26 faldo:position ?thisPositionOn29 ; rdf:type faldo:ExactPosition . ?pfse27 faldo:position ?thisPositionOn30 ; rdf:type faldo:ExactPosition . ?ligand28 rdfs:subClassOf chebi:60240 . ?pfs31 up:annotation ?annotation32 . ?annotation32 faldo:begin ?pfsb33 ; faldo:end ?pfse34 ; up:ligand ?ligand35 ; rdf:type up:Binding_Site_Annotation ; rdfs:comment 'via carbamate group' . ?pfsb33 faldo:position ?thisPositionOn36 ; rdf:type faldo:ExactPosition . ?pfse34 faldo:position ?thisPositionOn37 ; rdf:type faldo:ExactPosition . ?ligand35 rdfs:subClassOf chebi:60240 . ?pfs38 up:annotation ?annotation39 . ?annotation39 faldo:begin ?pfsb40 ; faldo:end ?pfse41 ; up:ligand ?ligand42 ; rdf:type up:Binding_Site_Annotation . ?pfsb40 faldo:position ?thisPositionOn43 ; rdf:type faldo:ExactPosition . ?pfse41 faldo:position ?thisPositionOn44 ; rdf:type faldo:ExactPosition . ?ligand42 rdfs:subClassOf chebi:60240 . ?pfs45 up:annotation ?annotation46 . ?annotation46 faldo:begin ?pfsb47 ; faldo:end ?pfse48 ; up:ligand ?ligand49 ; rdf:type up:Binding_Site_Annotation . ?pfsb47 faldo:position ?thisPositionOn50 ; rdf:type faldo:ExactPosition . ?pfse48 faldo:position ?thisPositionOn51 ; rdf:type faldo:ExactPosition . ?ligand49 rdfs:subClassOf chebi:60240 . ?pfs52 up:annotation ?annotation53 . ?annotation53 faldo:begin ?pfsb54 ; faldo:end ?pfse55 ; up:ligand ?ligand56 ; rdf:type up:Binding_Site_Annotation . ?pfsb54 faldo:position ?thisPositionOn57 ; rdf:type faldo:ExactPosition . ?pfse55 faldo:position ?thisPositionOn58 ; rdf:type faldo:ExactPosition . ?ligand56 rdfs:subClassOf chebi:60240 . ?pfs59 up:annotation ?annotation60 . ?annotation60 faldo:begin ?pfsb61 ; faldo:end ?pfse62 ; up:ligand ?ligand63 ; rdf:type up:Binding_Site_Annotation . ?pfsb61 faldo:position ?thisPositionOn65 ; rdf:type faldo:ExactPosition . ?pfse62 faldo:position ?thisPositionOn66 ; rdf:type faldo:ExactPosition . ?ligand63 rdfs:subClassOf ?molecule64 . ?molecule64 rdfs:label 'substrate' . ?pfs67 up:annotation ?annotation68 . ?annotation68 faldo:begin ?pfsb69 ; faldo:end ?pfse70 ; up:ligand ?ligand71 ; rdf:type up:Binding_Site_Annotation . ?pfsb69 faldo:position ?thisPositionOn73 ; rdf:type faldo:ExactPosition . ?pfse70 faldo:position ?thisPositionOn74 ; rdf:type faldo:ExactPosition . ?ligand71 rdfs:subClassOf ?molecule72 . ?molecule72 rdfs:label 'substrate' . ?pfs75 up:annotation ?annotation76 . ?annotation76 faldo:begin ?pfsb77 ; faldo:end ?pfse78 ; up:ligand ?ligand79 ; rdf:type up:Binding_Site_Annotation . ?pfsb77 faldo:position ?thisPositionOn81 ; rdf:type faldo:ExactPosition . ?pfse78 faldo:position ?thisPositionOn82 ; rdf:type faldo:ExactPosition . ?ligand79 rdfs:subClassOf ?molecule80 . ?molecule80 rdfs:label 'substrate' . ?pfs83 up:annotation ?annotation84 . ?annotation84 faldo:begin ?pfsb85 ; faldo:end ?pfse86 ; rdf:type up:Modified_Residue_Annotation ; rdfs:comment 'N6-carboxylysine' . ?pfsb85 faldo:position ?thisPositionOn87 ; rdf:type faldo:ExactPosition . ?pfse86 faldo:position ?thisPositionOn88 ; rdf:type faldo:ExactPosition . _:590912 a rdf:Statement ; up:attribution _:590889 ; rdf:subject ?this ; rdf:predicate up:recommendedName ; rdf:object ?name0 . _:590913 a rdf:Statement ; up:attribution _:590890 ; rdf:subject ?this ; rdf:predicate up:alternativeName ; rdf:object ?name1 . _:590914 a rdf:Statement ; up:attribution _:590891 ; rdf:subject ?gene2 ; rdf:predicate up:encodedBy ; rdf:object ?gene2 . _:590915 a rdf:Statement ; up:attribution _:590892 ; rdf:subject ?this ; rdf:predicate up:annotation ; rdf:object ?annotation3 . _:590916 a rdf:Statement ; up:attribution _:590893 ; rdf:subject ?this ; rdf:predicate up:annotation ; rdf:object ?annotation4 . _:590917 a rdf:Statement ; up:attribution _:590894 ; rdf:subject ?this ; rdf:predicate up:annotation ; rdf:object ?annotation6 . _:590918 a rdf:Statement ; up:attribution _:590895 ; rdf:subject ?this ; rdf:predicate up:annotation ; rdf:object ?annotation7 . _:590919 a rdf:Statement ; up:attribution _:590896 ; rdf:subject ?this ; rdf:predicate up:annotation ; rdf:object ?annotation8 . _:590920 a rdf:Statement ; up:attribution _:590897 ; rdf:subject ?this ; rdf:predicate up:annotation ; rdf:object ?annotation9 . _:590921 a rdf:Statement ; up:attribution _:590898 ; rdf:subject ?this ; rdf:predicate up:classifiedWith ; rdf:object keyword:378 . _:590922 a rdf:Statement ; up:attribution _:590899 ; rdf:subject ?this ; rdf:predicate up:classifiedWith ; rdf:object keyword:479 . _:590923 a rdf:Statement ; up:attribution _:590900 ; rdf:subject ?this ; rdf:predicate up:classifiedWith ; rdf:object GO:0016812 . _:590924 a rdf:Statement ; up:source unirule:MF_01644 ; rdf:subject ?pfs10 ; rdf:predicate up:annotation ; rdf:object ?annotation11 . _:590925 a rdf:Statement ; up:attribution _:590901 ; rdf:subject ?pfs10 ; rdf:predicate up:annotation ; rdf:object ?annotation11 . _:590926 a rdf:Statement ; up:source unirule:MF_01644 ; rdf:subject ?pfs17 ; rdf:predicate up:annotation ; rdf:object ?annotation18 . _:590927 a rdf:Statement ; up:attribution _:590902 ; rdf:subject ?pfs17 ; rdf:predicate up:annotation ; rdf:object ?annotation18 . _:590928 a rdf:Statement ; up:source unirule:MF_01644 ; rdf:subject ?pfs24 ; rdf:predicate up:annotation ; rdf:object ?annotation25 . _:590929 a rdf:Statement ; up:attribution _:590903 ; rdf:subject ?pfs24 ; rdf:predicate up:annotation ; rdf:object ?annotation25 . _:590930 a rdf:Statement ; up:source unirule:MF_01644 ; rdf:subject ?pfs31 ; rdf:predicate up:annotation ; rdf:object ?annotation32 . _:590931 a rdf:Statement ; up:attribution _:590904 ; rdf:subject ?pfs31 ; rdf:predicate up:annotation ; rdf:object ?annotation32 . _:590932 a rdf:Statement ; up:source unirule:MF_01644 ; rdf:subject ?pfs38 ; rdf:predicate up:annotation ; rdf:object ?annotation39 . _:590933 a rdf:Statement ; up:attribution _:590905 ; rdf:subject ?pfs38 ; rdf:predicate up:annotation ; rdf:object ?annotation39 . _:590934 a rdf:Statement ; up:source unirule:MF_01644 ; rdf:subject ?pfs45 ; rdf:predicate up:annotation ; rdf:object ?annotation46 . _:590935 a rdf:Statement ; up:attribution _:590906 ; rdf:subject ?pfs45 ; rdf:predicate up:annotation ; rdf:object ?annotation46 . _:590936 a rdf:Statement ; up:source unirule:MF_01644 ; rdf:subject ?pfs52 ; rdf:predicate up:annotation ; rdf:object ?annotation53 . _:590937 a rdf:Statement ; up:attribution _:590907 ; rdf:subject ?pfs52 ; rdf:predicate up:annotation ; rdf:object ?annotation53 . _:590938 a rdf:Statement ; up:source unirule:MF_01644 ; rdf:subject ?pfs59 ; rdf:predicate up:annotation ; rdf:object ?annotation60 . _:590939 a rdf:Statement ; up:attribution _:590908 ; rdf:subject ?pfs59 ; rdf:predicate up:annotation ; rdf:object ?annotation60 . _:590940 a rdf:Statement ; up:source unirule:MF_01644 ; rdf:subject ?pfs67 ; rdf:predicate up:annotation ; rdf:object ?annotation68 . _:590941 a rdf:Statement ; up:attribution _:590909 ; rdf:subject ?pfs67 ; rdf:predicate up:annotation ; rdf:object ?annotation68 . _:590942 a rdf:Statement ; up:source unirule:MF_01644 ; rdf:subject ?pfs75 ; rdf:predicate up:annotation ; rdf:object ?annotation76 . _:590943 a rdf:Statement ; up:attribution _:590910 ; rdf:subject ?pfs75 ; rdf:predicate up:annotation ; rdf:object ?annotation76 . _:590944 a rdf:Statement ; up:source unirule:MF_01644 ; rdf:subject ?pfs83 ; rdf:predicate up:annotation ; rdf:object ?annotation84 . _:590945 a rdf:Statement ; up:attribution _:590911 ; rdf:subject ?pfs83 ; rdf:predicate up:annotation ; rdf:object ?annotation84 . } WHERE { #baseURI: http://purl.uniprot.org/unirule/MF_01644 #Rule MF_01644 Created by:gkeller on:2008-01-14 Modified by:ecastro on:2023-06-01 ?this up:organism ?thisOrganism ; rdfs:seeAlso signature:MF_01644 . ?thisOrganism rdfs:subClassOf+ taxon:543 . BIND(URI(CONCAT(STR(?this), '#MF_01644a0')) AS ?name0) . BIND(URI(CONCAT(STR(?this), '#MF_01644a1')) AS ?name1) . BIND(URI(CONCAT(STR(?this), '#MF_01644a3')) AS ?annotation3) . BIND(URI(CONCAT(STR(?this), '#MF_01644a4')) AS ?annotation4) . BIND(URI(CONCAT(STR(?this), '#MF_01644a6')) AS ?annotation6) . BIND(URI(CONCAT(STR(?this), '#MF_01644a7')) AS ?annotation7) . BIND(URI(CONCAT(STR(?this), '#MF_01644a8')) AS ?annotation8) . BIND(URI(CONCAT(STR(?this), '#MF_01644a9')) AS ?annotation9) . OPTIONAL { ?this up:sequence ?thisSequence . ?thisSequence rdf:value ?thisSequenceValue . ?templateMotifMatch93 faldo:location ?templateMotifSequenceMatchRegionQ4680694 ; edam:is_output_of ?templateMotifSequenceProfileAlignmentOperationQ4680696 ; rdf:type edam:data_0869 ; rdf:value ?templateMotifCigarQ46806MF_0164489 . ?templateMotifSequenceMatchRegionQ4680694 faldo:begin ?templateMotifSequenceMatchBeginQ4680695 . ?templateMotifSequenceMatchBeginQ4680695 faldo:position ?templateMotifSequenceMatchBeginPositionQ4680690 ; faldo:reference isoform:Q46806-1 . ?templateMotifSequenceProfileAlignmentOperationQ4680696 edam:has_input signature:MF_01644 ; rdf:type edam:operation_0300 . ?targetMotifMatch97 faldo:location ?targetMotifMatchRegionMatch98 ; edam:is_output_of ?targetMotifSequenceAlignmentOperationMF_01644100 ; rdf:type edam:data_0869 ; rdf:value ?targetMotifMatchCigarQ46806MF_0164491 . ?targetMotifMatchRegionMatch98 faldo:begin ?targetMotifMatchRegionMatchBeginMF_0164499 . ?targetMotifMatchRegionMatchBeginMF_0164499 faldo:position ?targetMotifMatchRegionMatchBeginPositionMF_0164492 ; faldo:reference ?thisSequence . ?targetMotifSequenceAlignmentOperationMF_01644100 edam:has_input signature:MF_01644 ; rdf:type edam:operation_0300 . BIND(STRLEN(REPLACE(SUBSTR(?templateMotifCigarQ46806MF_0164489, 1, (STRLEN(?templateMotifCigarQ46806MF_0164489) - STRLEN(REPLACE(?templateMotifCigarQ46806MF_0164489, CONCAT('^(?:-*[^-]){', STR(((59 - ?templateMotifSequenceMatchBeginPositionQ4680690) + 1)), '}'), '')))), '[a-z]', '')) AS ?step1101) . BIND((STRLEN(SUBSTR(?targetMotifMatchCigarQ46806MF_0164491, 1, (STRLEN(?targetMotifMatchCigarQ46806MF_0164491) - STRLEN(REPLACE(?targetMotifMatchCigarQ46806MF_0164491, CONCAT('^(?:[a-z]*(?:[A-Z]|-)){', STR(?step1101), '}'), ''))))) - STRLEN(REPLACE(SUBSTR(?targetMotifMatchCigarQ46806MF_0164491, 1, (STRLEN(?targetMotifMatchCigarQ46806MF_0164491) - STRLEN(REPLACE(?targetMotifMatchCigarQ46806MF_0164491, CONCAT('^(?:[a-z]*(?:[A-Z]|-)){', STR(?step1101), '}'), '')))), '[^-]', ''))) AS ?step2102) . BIND(((?step2102 + ?targetMotifMatchRegionMatchBeginPositionMF_0164492) - 1) AS ?thisPositionOn15) . BIND(?thisPositionOn15 AS ?thisPositionOn16) . BIND(?this AS ?pfs1t103) . BIND(URI(CONCAT(STR(?thisSequence), '#position', STR(?thisPositionOn15))) AS ?pfsb12) . BIND(URI(CONCAT(STR(?thisSequence), '#position', STR(?thisPositionOn16))) AS ?pfse13) . FILTER ((SUBSTR(?thisSequenceValue, ?thisPositionOn15, 1) = 'H')) . BIND(URI(CONCAT(STR(?this), '#MF_01644a11')) AS ?annotation11) . BIND(?this AS ?pfs10) . } OPTIONAL { ?this up:sequence ?thisSequence . ?thisSequence rdf:value ?thisSequenceValue . ?templateMotifMatch108 faldo:location ?templateMotifSequenceMatchRegionQ46806109 ; edam:is_output_of ?templateMotifSequenceProfileAlignmentOperationQ46806111 ; rdf:type edam:data_0869 ; rdf:value ?templateMotifCigarQ46806MF_01644104 . ?templateMotifSequenceMatchRegionQ46806109 faldo:begin ?templateMotifSequenceMatchBeginQ46806110 . ?templateMotifSequenceMatchBeginQ46806110 faldo:position ?templateMotifSequenceMatchBeginPositionQ46806105 ; faldo:reference isoform:Q46806-1 . ?templateMotifSequenceProfileAlignmentOperationQ46806111 edam:has_input signature:MF_01644 ; rdf:type edam:operation_0300 . ?targetMotifMatch112 faldo:location ?targetMotifMatchRegionMatch113 ; edam:is_output_of ?targetMotifSequenceAlignmentOperationMF_01644115 ; rdf:type edam:data_0869 ; rdf:value ?targetMotifMatchCigarQ46806MF_01644106 . ?targetMotifMatchRegionMatch113 faldo:begin ?targetMotifMatchRegionMatchBeginMF_01644114 . ?targetMotifMatchRegionMatchBeginMF_01644114 faldo:position ?targetMotifMatchRegionMatchBeginPositionMF_01644107 ; faldo:reference ?thisSequence . ?targetMotifSequenceAlignmentOperationMF_01644115 edam:has_input signature:MF_01644 ; rdf:type edam:operation_0300 . BIND(STRLEN(REPLACE(SUBSTR(?templateMotifCigarQ46806MF_01644104, 1, (STRLEN(?templateMotifCigarQ46806MF_01644104) - STRLEN(REPLACE(?templateMotifCigarQ46806MF_01644104, CONCAT('^(?:-*[^-]){', STR(((61 - ?templateMotifSequenceMatchBeginPositionQ46806105) + 1)), '}'), '')))), '[a-z]', '')) AS ?step1116) . BIND((STRLEN(SUBSTR(?targetMotifMatchCigarQ46806MF_01644106, 1, (STRLEN(?targetMotifMatchCigarQ46806MF_01644106) - STRLEN(REPLACE(?targetMotifMatchCigarQ46806MF_01644106, CONCAT('^(?:[a-z]*(?:[A-Z]|-)){', STR(?step1116), '}'), ''))))) - STRLEN(REPLACE(SUBSTR(?targetMotifMatchCigarQ46806MF_01644106, 1, (STRLEN(?targetMotifMatchCigarQ46806MF_01644106) - STRLEN(REPLACE(?targetMotifMatchCigarQ46806MF_01644106, CONCAT('^(?:[a-z]*(?:[A-Z]|-)){', STR(?step1116), '}'), '')))), '[^-]', ''))) AS ?step2117) . BIND(((?step2117 + ?targetMotifMatchRegionMatchBeginPositionMF_01644107) - 1) AS ?thisPositionOn22) . BIND(?thisPositionOn22 AS ?thisPositionOn23) . BIND(?this AS ?pfs1t118) . BIND(URI(CONCAT(STR(?thisSequence), '#position', STR(?thisPositionOn22))) AS ?pfsb19) . BIND(URI(CONCAT(STR(?thisSequence), '#position', STR(?thisPositionOn23))) AS ?pfse20) . FILTER ((SUBSTR(?thisSequenceValue, ?thisPositionOn22, 1) = 'H')) . BIND(URI(CONCAT(STR(?this), '#MF_01644a18')) AS ?annotation18) . BIND(?this AS ?pfs17) . } OPTIONAL { ?this up:sequence ?thisSequence . ?thisSequence rdf:value ?thisSequenceValue . ?templateMotifMatch123 faldo:location ?templateMotifSequenceMatchRegionQ46806124 ; edam:is_output_of ?templateMotifSequenceProfileAlignmentOperationQ46806126 ; rdf:type edam:data_0869 ; rdf:value ?templateMotifCigarQ46806MF_01644119 . ?templateMotifSequenceMatchRegionQ46806124 faldo:begin ?templateMotifSequenceMatchBeginQ46806125 . ?templateMotifSequenceMatchBeginQ46806125 faldo:position ?templateMotifSequenceMatchBeginPositionQ46806120 ; faldo:reference isoform:Q46806-1 . ?templateMotifSequenceProfileAlignmentOperationQ46806126 edam:has_input signature:MF_01644 ; rdf:type edam:operation_0300 . ?targetMotifMatch127 faldo:location ?targetMotifMatchRegionMatch128 ; edam:is_output_of ?targetMotifSequenceAlignmentOperationMF_01644130 ; rdf:type edam:data_0869 ; rdf:value ?targetMotifMatchCigarQ46806MF_01644121 . ?targetMotifMatchRegionMatch128 faldo:begin ?targetMotifMatchRegionMatchBeginMF_01644129 . ?targetMotifMatchRegionMatchBeginMF_01644129 faldo:position ?targetMotifMatchRegionMatchBeginPositionMF_01644122 ; faldo:reference ?thisSequence . ?targetMotifSequenceAlignmentOperationMF_01644130 edam:has_input signature:MF_01644 ; rdf:type edam:operation_0300 . BIND(STRLEN(REPLACE(SUBSTR(?templateMotifCigarQ46806MF_01644119, 1, (STRLEN(?templateMotifCigarQ46806MF_01644119) - STRLEN(REPLACE(?templateMotifCigarQ46806MF_01644119, CONCAT('^(?:-*[^-]){', STR(((151 - ?templateMotifSequenceMatchBeginPositionQ46806120) + 1)), '}'), '')))), '[a-z]', '')) AS ?step1131) . BIND((STRLEN(SUBSTR(?targetMotifMatchCigarQ46806MF_01644121, 1, (STRLEN(?targetMotifMatchCigarQ46806MF_01644121) - STRLEN(REPLACE(?targetMotifMatchCigarQ46806MF_01644121, CONCAT('^(?:[a-z]*(?:[A-Z]|-)){', STR(?step1131), '}'), ''))))) - STRLEN(REPLACE(SUBSTR(?targetMotifMatchCigarQ46806MF_01644121, 1, (STRLEN(?targetMotifMatchCigarQ46806MF_01644121) - STRLEN(REPLACE(?targetMotifMatchCigarQ46806MF_01644121, CONCAT('^(?:[a-z]*(?:[A-Z]|-)){', STR(?step1131), '}'), '')))), '[^-]', ''))) AS ?step2132) . BIND(((?step2132 + ?targetMotifMatchRegionMatchBeginPositionMF_01644122) - 1) AS ?thisPositionOn29) . BIND(?thisPositionOn29 AS ?thisPositionOn30) . BIND(?this AS ?pfs1t133) . BIND(URI(CONCAT(STR(?thisSequence), '#position', STR(?thisPositionOn29))) AS ?pfsb26) . BIND(URI(CONCAT(STR(?thisSequence), '#position', STR(?thisPositionOn30))) AS ?pfse27) . FILTER ((SUBSTR(?thisSequenceValue, ?thisPositionOn29, 1) = 'K')) . BIND(URI(CONCAT(STR(?this), '#MF_01644a25')) AS ?annotation25) . BIND(?this AS ?pfs24) . } OPTIONAL { ?this up:sequence ?thisSequence . ?thisSequence rdf:value ?thisSequenceValue . ?templateMotifMatch138 faldo:location ?templateMotifSequenceMatchRegionQ46806139 ; edam:is_output_of ?templateMotifSequenceProfileAlignmentOperationQ46806141 ; rdf:type edam:data_0869 ; rdf:value ?templateMotifCigarQ46806MF_01644134 . ?templateMotifSequenceMatchRegionQ46806139 faldo:begin ?templateMotifSequenceMatchBeginQ46806140 . ?templateMotifSequenceMatchBeginQ46806140 faldo:position ?templateMotifSequenceMatchBeginPositionQ46806135 ; faldo:reference isoform:Q46806-1 . ?templateMotifSequenceProfileAlignmentOperationQ46806141 edam:has_input signature:MF_01644 ; rdf:type edam:operation_0300 . ?targetMotifMatch142 faldo:location ?targetMotifMatchRegionMatch143 ; edam:is_output_of ?targetMotifSequenceAlignmentOperationMF_01644145 ; rdf:type edam:data_0869 ; rdf:value ?targetMotifMatchCigarQ46806MF_01644136 . ?targetMotifMatchRegionMatch143 faldo:begin ?targetMotifMatchRegionMatchBeginMF_01644144 . ?targetMotifMatchRegionMatchBeginMF_01644144 faldo:position ?targetMotifMatchRegionMatchBeginPositionMF_01644137 ; faldo:reference ?thisSequence . ?targetMotifSequenceAlignmentOperationMF_01644145 edam:has_input signature:MF_01644 ; rdf:type edam:operation_0300 . BIND(STRLEN(REPLACE(SUBSTR(?templateMotifCigarQ46806MF_01644134, 1, (STRLEN(?templateMotifCigarQ46806MF_01644134) - STRLEN(REPLACE(?templateMotifCigarQ46806MF_01644134, CONCAT('^(?:-*[^-]){', STR(((151 - ?templateMotifSequenceMatchBeginPositionQ46806135) + 1)), '}'), '')))), '[a-z]', '')) AS ?step1146) . BIND((STRLEN(SUBSTR(?targetMotifMatchCigarQ46806MF_01644136, 1, (STRLEN(?targetMotifMatchCigarQ46806MF_01644136) - STRLEN(REPLACE(?targetMotifMatchCigarQ46806MF_01644136, CONCAT('^(?:[a-z]*(?:[A-Z]|-)){', STR(?step1146), '}'), ''))))) - STRLEN(REPLACE(SUBSTR(?targetMotifMatchCigarQ46806MF_01644136, 1, (STRLEN(?targetMotifMatchCigarQ46806MF_01644136) - STRLEN(REPLACE(?targetMotifMatchCigarQ46806MF_01644136, CONCAT('^(?:[a-z]*(?:[A-Z]|-)){', STR(?step1146), '}'), '')))), '[^-]', ''))) AS ?step2147) . BIND(((?step2147 + ?targetMotifMatchRegionMatchBeginPositionMF_01644137) - 1) AS ?thisPositionOn36) . BIND(?thisPositionOn36 AS ?thisPositionOn37) . BIND(?this AS ?pfs1t148) . BIND(URI(CONCAT(STR(?thisSequence), '#position', STR(?thisPositionOn36))) AS ?pfsb33) . BIND(URI(CONCAT(STR(?thisSequence), '#position', STR(?thisPositionOn37))) AS ?pfse34) . FILTER ((SUBSTR(?thisSequenceValue, ?thisPositionOn36, 1) = 'K')) . BIND(URI(CONCAT(STR(?this), '#MF_01644a32')) AS ?annotation32) . BIND(?this AS ?pfs31) . } OPTIONAL { ?this up:sequence ?thisSequence . ?thisSequence rdf:value ?thisSequenceValue . ?templateMotifMatch153 faldo:location ?templateMotifSequenceMatchRegionQ46806154 ; edam:is_output_of ?templateMotifSequenceProfileAlignmentOperationQ46806156 ; rdf:type edam:data_0869 ; rdf:value ?templateMotifCigarQ46806MF_01644149 . ?templateMotifSequenceMatchRegionQ46806154 faldo:begin ?templateMotifSequenceMatchBeginQ46806155 . ?templateMotifSequenceMatchBeginQ46806155 faldo:position ?templateMotifSequenceMatchBeginPositionQ46806150 ; faldo:reference isoform:Q46806-1 . ?templateMotifSequenceProfileAlignmentOperationQ46806156 edam:has_input signature:MF_01644 ; rdf:type edam:operation_0300 . ?targetMotifMatch157 faldo:location ?targetMotifMatchRegionMatch158 ; edam:is_output_of ?targetMotifSequenceAlignmentOperationMF_01644160 ; rdf:type edam:data_0869 ; rdf:value ?targetMotifMatchCigarQ46806MF_01644151 . ?targetMotifMatchRegionMatch158 faldo:begin ?targetMotifMatchRegionMatchBeginMF_01644159 . ?targetMotifMatchRegionMatchBeginMF_01644159 faldo:position ?targetMotifMatchRegionMatchBeginPositionMF_01644152 ; faldo:reference ?thisSequence . ?targetMotifSequenceAlignmentOperationMF_01644160 edam:has_input signature:MF_01644 ; rdf:type edam:operation_0300 . BIND(STRLEN(REPLACE(SUBSTR(?templateMotifCigarQ46806MF_01644149, 1, (STRLEN(?templateMotifCigarQ46806MF_01644149) - STRLEN(REPLACE(?templateMotifCigarQ46806MF_01644149, CONCAT('^(?:-*[^-]){', STR(((182 - ?templateMotifSequenceMatchBeginPositionQ46806150) + 1)), '}'), '')))), '[a-z]', '')) AS ?step1161) . BIND((STRLEN(SUBSTR(?targetMotifMatchCigarQ46806MF_01644151, 1, (STRLEN(?targetMotifMatchCigarQ46806MF_01644151) - STRLEN(REPLACE(?targetMotifMatchCigarQ46806MF_01644151, CONCAT('^(?:[a-z]*(?:[A-Z]|-)){', STR(?step1161), '}'), ''))))) - STRLEN(REPLACE(SUBSTR(?targetMotifMatchCigarQ46806MF_01644151, 1, (STRLEN(?targetMotifMatchCigarQ46806MF_01644151) - STRLEN(REPLACE(?targetMotifMatchCigarQ46806MF_01644151, CONCAT('^(?:[a-z]*(?:[A-Z]|-)){', STR(?step1161), '}'), '')))), '[^-]', ''))) AS ?step2162) . BIND(((?step2162 + ?targetMotifMatchRegionMatchBeginPositionMF_01644152) - 1) AS ?thisPositionOn43) . BIND(?thisPositionOn43 AS ?thisPositionOn44) . BIND(?this AS ?pfs1t163) . BIND(URI(CONCAT(STR(?thisSequence), '#position', STR(?thisPositionOn43))) AS ?pfsb40) . BIND(URI(CONCAT(STR(?thisSequence), '#position', STR(?thisPositionOn44))) AS ?pfse41) . FILTER ((SUBSTR(?thisSequenceValue, ?thisPositionOn43, 1) = 'H')) . BIND(URI(CONCAT(STR(?this), '#MF_01644a39')) AS ?annotation39) . BIND(?this AS ?pfs38) . } OPTIONAL { ?this up:sequence ?thisSequence . ?thisSequence rdf:value ?thisSequenceValue . ?templateMotifMatch168 faldo:location ?templateMotifSequenceMatchRegionQ46806169 ; edam:is_output_of ?templateMotifSequenceProfileAlignmentOperationQ46806171 ; rdf:type edam:data_0869 ; rdf:value ?templateMotifCigarQ46806MF_01644164 . ?templateMotifSequenceMatchRegionQ46806169 faldo:begin ?templateMotifSequenceMatchBeginQ46806170 . ?templateMotifSequenceMatchBeginQ46806170 faldo:position ?templateMotifSequenceMatchBeginPositionQ46806165 ; faldo:reference isoform:Q46806-1 . ?templateMotifSequenceProfileAlignmentOperationQ46806171 edam:has_input signature:MF_01644 ; rdf:type edam:operation_0300 . ?targetMotifMatch172 faldo:location ?targetMotifMatchRegionMatch173 ; edam:is_output_of ?targetMotifSequenceAlignmentOperationMF_01644175 ; rdf:type edam:data_0869 ; rdf:value ?targetMotifMatchCigarQ46806MF_01644166 . ?targetMotifMatchRegionMatch173 faldo:begin ?targetMotifMatchRegionMatchBeginMF_01644174 . ?targetMotifMatchRegionMatchBeginMF_01644174 faldo:position ?targetMotifMatchRegionMatchBeginPositionMF_01644167 ; faldo:reference ?thisSequence . ?targetMotifSequenceAlignmentOperationMF_01644175 edam:has_input signature:MF_01644 ; rdf:type edam:operation_0300 . BIND(STRLEN(REPLACE(SUBSTR(?templateMotifCigarQ46806MF_01644164, 1, (STRLEN(?templateMotifCigarQ46806MF_01644164) - STRLEN(REPLACE(?templateMotifCigarQ46806MF_01644164, CONCAT('^(?:-*[^-]){', STR(((239 - ?templateMotifSequenceMatchBeginPositionQ46806165) + 1)), '}'), '')))), '[a-z]', '')) AS ?step1176) . BIND((STRLEN(SUBSTR(?targetMotifMatchCigarQ46806MF_01644166, 1, (STRLEN(?targetMotifMatchCigarQ46806MF_01644166) - STRLEN(REPLACE(?targetMotifMatchCigarQ46806MF_01644166, CONCAT('^(?:[a-z]*(?:[A-Z]|-)){', STR(?step1176), '}'), ''))))) - STRLEN(REPLACE(SUBSTR(?targetMotifMatchCigarQ46806MF_01644166, 1, (STRLEN(?targetMotifMatchCigarQ46806MF_01644166) - STRLEN(REPLACE(?targetMotifMatchCigarQ46806MF_01644166, CONCAT('^(?:[a-z]*(?:[A-Z]|-)){', STR(?step1176), '}'), '')))), '[^-]', ''))) AS ?step2177) . BIND(((?step2177 + ?targetMotifMatchRegionMatchBeginPositionMF_01644167) - 1) AS ?thisPositionOn50) . BIND(?thisPositionOn50 AS ?thisPositionOn51) . BIND(?this AS ?pfs1t178) . BIND(URI(CONCAT(STR(?thisSequence), '#position', STR(?thisPositionOn50))) AS ?pfsb47) . BIND(URI(CONCAT(STR(?thisSequence), '#position', STR(?thisPositionOn51))) AS ?pfse48) . FILTER ((SUBSTR(?thisSequenceValue, ?thisPositionOn50, 1) = 'H')) . BIND(URI(CONCAT(STR(?this), '#MF_01644a46')) AS ?annotation46) . BIND(?this AS ?pfs45) . } OPTIONAL { ?this up:sequence ?thisSequence . ?thisSequence rdf:value ?thisSequenceValue . ?templateMotifMatch183 faldo:location ?templateMotifSequenceMatchRegionQ46806184 ; edam:is_output_of ?templateMotifSequenceProfileAlignmentOperationQ46806186 ; rdf:type edam:data_0869 ; rdf:value ?templateMotifCigarQ46806MF_01644179 . ?templateMotifSequenceMatchRegionQ46806184 faldo:begin ?templateMotifSequenceMatchBeginQ46806185 . ?templateMotifSequenceMatchBeginQ46806185 faldo:position ?templateMotifSequenceMatchBeginPositionQ46806180 ; faldo:reference isoform:Q46806-1 . ?templateMotifSequenceProfileAlignmentOperationQ46806186 edam:has_input signature:MF_01644 ; rdf:type edam:operation_0300 . ?targetMotifMatch187 faldo:location ?targetMotifMatchRegionMatch188 ; edam:is_output_of ?targetMotifSequenceAlignmentOperationMF_01644190 ; rdf:type edam:data_0869 ; rdf:value ?targetMotifMatchCigarQ46806MF_01644181 . ?targetMotifMatchRegionMatch188 faldo:begin ?targetMotifMatchRegionMatchBeginMF_01644189 . ?targetMotifMatchRegionMatchBeginMF_01644189 faldo:position ?targetMotifMatchRegionMatchBeginPositionMF_01644182 ; faldo:reference ?thisSequence . ?targetMotifSequenceAlignmentOperationMF_01644190 edam:has_input signature:MF_01644 ; rdf:type edam:operation_0300 . BIND(STRLEN(REPLACE(SUBSTR(?templateMotifCigarQ46806MF_01644179, 1, (STRLEN(?templateMotifCigarQ46806MF_01644179) - STRLEN(REPLACE(?templateMotifCigarQ46806MF_01644179, CONCAT('^(?:-*[^-]){', STR(((313 - ?templateMotifSequenceMatchBeginPositionQ46806180) + 1)), '}'), '')))), '[a-z]', '')) AS ?step1191) . BIND((STRLEN(SUBSTR(?targetMotifMatchCigarQ46806MF_01644181, 1, (STRLEN(?targetMotifMatchCigarQ46806MF_01644181) - STRLEN(REPLACE(?targetMotifMatchCigarQ46806MF_01644181, CONCAT('^(?:[a-z]*(?:[A-Z]|-)){', STR(?step1191), '}'), ''))))) - STRLEN(REPLACE(SUBSTR(?targetMotifMatchCigarQ46806MF_01644181, 1, (STRLEN(?targetMotifMatchCigarQ46806MF_01644181) - STRLEN(REPLACE(?targetMotifMatchCigarQ46806MF_01644181, CONCAT('^(?:[a-z]*(?:[A-Z]|-)){', STR(?step1191), '}'), '')))), '[^-]', ''))) AS ?step2192) . BIND(((?step2192 + ?targetMotifMatchRegionMatchBeginPositionMF_01644182) - 1) AS ?thisPositionOn57) . BIND(?thisPositionOn57 AS ?thisPositionOn58) . BIND(?this AS ?pfs1t193) . BIND(URI(CONCAT(STR(?thisSequence), '#position', STR(?thisPositionOn57))) AS ?pfsb54) . BIND(URI(CONCAT(STR(?thisSequence), '#position', STR(?thisPositionOn58))) AS ?pfse55) . FILTER ((SUBSTR(?thisSequenceValue, ?thisPositionOn57, 1) = 'D')) . BIND(URI(CONCAT(STR(?this), '#MF_01644a53')) AS ?annotation53) . BIND(?this AS ?pfs52) . } OPTIONAL { ?this up:sequence ?thisSequence . ?thisSequence rdf:value ?thisSequenceValue . ?templateMotifMatch198 faldo:location ?templateMotifSequenceMatchRegionQ46806199 ; edam:is_output_of ?templateMotifSequenceProfileAlignmentOperationQ46806201 ; rdf:type edam:data_0869 ; rdf:value ?templateMotifCigarQ46806MF_01644194 . ?templateMotifSequenceMatchRegionQ46806199 faldo:begin ?templateMotifSequenceMatchBeginQ46806200 . ?templateMotifSequenceMatchBeginQ46806200 faldo:position ?templateMotifSequenceMatchBeginPositionQ46806195 ; faldo:reference isoform:Q46806-1 . ?templateMotifSequenceProfileAlignmentOperationQ46806201 edam:has_input signature:MF_01644 ; rdf:type edam:operation_0300 . ?targetMotifMatch202 faldo:location ?targetMotifMatchRegionMatch203 ; edam:is_output_of ?targetMotifSequenceAlignmentOperationMF_01644205 ; rdf:type edam:data_0869 ; rdf:value ?targetMotifMatchCigarQ46806MF_01644196 . ?targetMotifMatchRegionMatch203 faldo:begin ?targetMotifMatchRegionMatchBeginMF_01644204 . ?targetMotifMatchRegionMatchBeginMF_01644204 faldo:position ?targetMotifMatchRegionMatchBeginPositionMF_01644197 ; faldo:reference ?thisSequence . ?targetMotifSequenceAlignmentOperationMF_01644205 edam:has_input signature:MF_01644 ; rdf:type edam:operation_0300 . BIND(STRLEN(REPLACE(SUBSTR(?templateMotifCigarQ46806MF_01644194, 1, (STRLEN(?templateMotifCigarQ46806MF_01644194) - STRLEN(REPLACE(?templateMotifCigarQ46806MF_01644194, CONCAT('^(?:-*[^-]){', STR(((156 - ?templateMotifSequenceMatchBeginPositionQ46806195) + 1)), '}'), '')))), '[a-z]', '')) AS ?step1206) . BIND((STRLEN(SUBSTR(?targetMotifMatchCigarQ46806MF_01644196, 1, (STRLEN(?targetMotifMatchCigarQ46806MF_01644196) - STRLEN(REPLACE(?targetMotifMatchCigarQ46806MF_01644196, CONCAT('^(?:[a-z]*(?:[A-Z]|-)){', STR(?step1206), '}'), ''))))) - STRLEN(REPLACE(SUBSTR(?targetMotifMatchCigarQ46806MF_01644196, 1, (STRLEN(?targetMotifMatchCigarQ46806MF_01644196) - STRLEN(REPLACE(?targetMotifMatchCigarQ46806MF_01644196, CONCAT('^(?:[a-z]*(?:[A-Z]|-)){', STR(?step1206), '}'), '')))), '[^-]', ''))) AS ?step2207) . BIND(((?step2207 + ?targetMotifMatchRegionMatchBeginPositionMF_01644197) - 1) AS ?thisPositionOn65) . BIND(?thisPositionOn65 AS ?thisPositionOn66) . BIND(?this AS ?pfs1t208) . BIND(URI(CONCAT(STR(?thisSequence), '#position', STR(?thisPositionOn65))) AS ?pfsb61) . BIND(URI(CONCAT(STR(?thisSequence), '#position', STR(?thisPositionOn66))) AS ?pfse62) . FILTER ((SUBSTR(?thisSequenceValue, ?thisPositionOn65, 1) = 'Y')) . BIND(URI(CONCAT(STR(?this), '#MF_01644a60')) AS ?annotation60) . BIND(?this AS ?pfs59) . } OPTIONAL { ?this up:sequence ?thisSequence . ?thisSequence rdf:value ?thisSequenceValue . ?templateMotifMatch213 faldo:location ?templateMotifSequenceMatchRegionQ46806214 ; edam:is_output_of ?templateMotifSequenceProfileAlignmentOperationQ46806216 ; rdf:type edam:data_0869 ; rdf:value ?templateMotifCigarQ46806MF_01644209 . ?templateMotifSequenceMatchRegionQ46806214 faldo:begin ?templateMotifSequenceMatchBeginQ46806215 . ?templateMotifSequenceMatchBeginQ46806215 faldo:position ?templateMotifSequenceMatchBeginPositionQ46806210 ; faldo:reference isoform:Q46806-1 . ?templateMotifSequenceProfileAlignmentOperationQ46806216 edam:has_input signature:MF_01644 ; rdf:type edam:operation_0300 . ?targetMotifMatch217 faldo:location ?targetMotifMatchRegionMatch218 ; edam:is_output_of ?targetMotifSequenceAlignmentOperationMF_01644220 ; rdf:type edam:data_0869 ; rdf:value ?targetMotifMatchCigarQ46806MF_01644211 . ?targetMotifMatchRegionMatch218 faldo:begin ?targetMotifMatchRegionMatchBeginMF_01644219 . ?targetMotifMatchRegionMatchBeginMF_01644219 faldo:position ?targetMotifMatchRegionMatchBeginPositionMF_01644212 ; faldo:reference ?thisSequence . ?targetMotifSequenceAlignmentOperationMF_01644220 edam:has_input signature:MF_01644 ; rdf:type edam:operation_0300 . BIND(STRLEN(REPLACE(SUBSTR(?templateMotifCigarQ46806MF_01644209, 1, (STRLEN(?templateMotifCigarQ46806MF_01644209) - STRLEN(REPLACE(?templateMotifCigarQ46806MF_01644209, CONCAT('^(?:-*[^-]){', STR(((286 - ?templateMotifSequenceMatchBeginPositionQ46806210) + 1)), '}'), '')))), '[a-z]', '')) AS ?step1221) . BIND((STRLEN(SUBSTR(?targetMotifMatchCigarQ46806MF_01644211, 1, (STRLEN(?targetMotifMatchCigarQ46806MF_01644211) - STRLEN(REPLACE(?targetMotifMatchCigarQ46806MF_01644211, CONCAT('^(?:[a-z]*(?:[A-Z]|-)){', STR(?step1221), '}'), ''))))) - STRLEN(REPLACE(SUBSTR(?targetMotifMatchCigarQ46806MF_01644211, 1, (STRLEN(?targetMotifMatchCigarQ46806MF_01644211) - STRLEN(REPLACE(?targetMotifMatchCigarQ46806MF_01644211, CONCAT('^(?:[a-z]*(?:[A-Z]|-)){', STR(?step1221), '}'), '')))), '[^-]', ''))) AS ?step2222) . BIND(((?step2222 + ?targetMotifMatchRegionMatchBeginPositionMF_01644212) - 1) AS ?thisPositionOn73) . BIND(?thisPositionOn73 AS ?thisPositionOn74) . BIND(?this AS ?pfs1t223) . BIND(URI(CONCAT(STR(?thisSequence), '#position', STR(?thisPositionOn73))) AS ?pfsb69) . BIND(URI(CONCAT(STR(?thisSequence), '#position', STR(?thisPositionOn74))) AS ?pfse70) . FILTER ((SUBSTR(?thisSequenceValue, ?thisPositionOn73, 1) = 'S')) . BIND(URI(CONCAT(STR(?this), '#MF_01644a68')) AS ?annotation68) . BIND(?this AS ?pfs67) . } OPTIONAL { ?this up:sequence ?thisSequence . ?thisSequence rdf:value ?thisSequenceValue . ?templateMotifMatch228 faldo:location ?templateMotifSequenceMatchRegionQ46806229 ; edam:is_output_of ?templateMotifSequenceProfileAlignmentOperationQ46806231 ; rdf:type edam:data_0869 ; rdf:value ?templateMotifCigarQ46806MF_01644224 . ?templateMotifSequenceMatchRegionQ46806229 faldo:begin ?templateMotifSequenceMatchBeginQ46806230 . ?templateMotifSequenceMatchBeginQ46806230 faldo:position ?templateMotifSequenceMatchBeginPositionQ46806225 ; faldo:reference isoform:Q46806-1 . ?templateMotifSequenceProfileAlignmentOperationQ46806231 edam:has_input signature:MF_01644 ; rdf:type edam:operation_0300 . ?targetMotifMatch232 faldo:location ?targetMotifMatchRegionMatch233 ; edam:is_output_of ?targetMotifSequenceAlignmentOperationMF_01644235 ; rdf:type edam:data_0869 ; rdf:value ?targetMotifMatchCigarQ46806MF_01644226 . ?targetMotifMatchRegionMatch233 faldo:begin ?targetMotifMatchRegionMatchBeginMF_01644234 . ?targetMotifMatchRegionMatchBeginMF_01644234 faldo:position ?targetMotifMatchRegionMatchBeginPositionMF_01644227 ; faldo:reference ?thisSequence . ?targetMotifSequenceAlignmentOperationMF_01644235 edam:has_input signature:MF_01644 ; rdf:type edam:operation_0300 . BIND(STRLEN(REPLACE(SUBSTR(?templateMotifCigarQ46806MF_01644224, 1, (STRLEN(?templateMotifCigarQ46806MF_01644224) - STRLEN(REPLACE(?templateMotifCigarQ46806MF_01644224, CONCAT('^(?:-*[^-]){', STR(((335 - ?templateMotifSequenceMatchBeginPositionQ46806225) + 1)), '}'), '')))), '[a-z]', '')) AS ?step1236) . BIND((STRLEN(SUBSTR(?targetMotifMatchCigarQ46806MF_01644226, 1, (STRLEN(?targetMotifMatchCigarQ46806MF_01644226) - STRLEN(REPLACE(?targetMotifMatchCigarQ46806MF_01644226, CONCAT('^(?:[a-z]*(?:[A-Z]|-)){', STR(?step1236), '}'), ''))))) - STRLEN(REPLACE(SUBSTR(?targetMotifMatchCigarQ46806MF_01644226, 1, (STRLEN(?targetMotifMatchCigarQ46806MF_01644226) - STRLEN(REPLACE(?targetMotifMatchCigarQ46806MF_01644226, CONCAT('^(?:[a-z]*(?:[A-Z]|-)){', STR(?step1236), '}'), '')))), '[^-]', ''))) AS ?step2237) . BIND(((?step2237 + ?targetMotifMatchRegionMatchBeginPositionMF_01644227) - 1) AS ?thisPositionOn81) . BIND(?thisPositionOn81 AS ?thisPositionOn82) . BIND(?this AS ?pfs1t238) . BIND(URI(CONCAT(STR(?thisSequence), '#position', STR(?thisPositionOn81))) AS ?pfsb77) . BIND(URI(CONCAT(STR(?thisSequence), '#position', STR(?thisPositionOn82))) AS ?pfse78) . FILTER ((SUBSTR(?thisSequenceValue, ?thisPositionOn81, 1) = 'N')) . BIND(URI(CONCAT(STR(?this), '#MF_01644a76')) AS ?annotation76) . BIND(?this AS ?pfs75) . } OPTIONAL { ?this up:sequence ?thisSequence . ?thisSequence rdf:value ?thisSequenceValue . ?templateMotifMatch243 faldo:location ?templateMotifSequenceMatchRegionQ46806244 ; edam:is_output_of ?templateMotifSequenceProfileAlignmentOperationQ46806246 ; rdf:type edam:data_0869 ; rdf:value ?templateMotifCigarQ46806MF_01644239 . ?templateMotifSequenceMatchRegionQ46806244 faldo:begin ?templateMotifSequenceMatchBeginQ46806245 . ?templateMotifSequenceMatchBeginQ46806245 faldo:position ?templateMotifSequenceMatchBeginPositionQ46806240 ; faldo:reference isoform:Q46806-1 . ?templateMotifSequenceProfileAlignmentOperationQ46806246 edam:has_input signature:MF_01644 ; rdf:type edam:operation_0300 . ?targetMotifMatch247 faldo:location ?targetMotifMatchRegionMatch248 ; edam:is_output_of ?targetMotifSequenceAlignmentOperationMF_01644250 ; rdf:type edam:data_0869 ; rdf:value ?targetMotifMatchCigarQ46806MF_01644241 . ?targetMotifMatchRegionMatch248 faldo:begin ?targetMotifMatchRegionMatchBeginMF_01644249 . ?targetMotifMatchRegionMatchBeginMF_01644249 faldo:position ?targetMotifMatchRegionMatchBeginPositionMF_01644242 ; faldo:reference ?thisSequence . ?targetMotifSequenceAlignmentOperationMF_01644250 edam:has_input signature:MF_01644 ; rdf:type edam:operation_0300 . BIND(STRLEN(REPLACE(SUBSTR(?templateMotifCigarQ46806MF_01644239, 1, (STRLEN(?templateMotifCigarQ46806MF_01644239) - STRLEN(REPLACE(?templateMotifCigarQ46806MF_01644239, CONCAT('^(?:-*[^-]){', STR(((151 - ?templateMotifSequenceMatchBeginPositionQ46806240) + 1)), '}'), '')))), '[a-z]', '')) AS ?step1251) . BIND((STRLEN(SUBSTR(?targetMotifMatchCigarQ46806MF_01644241, 1, (STRLEN(?targetMotifMatchCigarQ46806MF_01644241) - STRLEN(REPLACE(?targetMotifMatchCigarQ46806MF_01644241, CONCAT('^(?:[a-z]*(?:[A-Z]|-)){', STR(?step1251), '}'), ''))))) - STRLEN(REPLACE(SUBSTR(?targetMotifMatchCigarQ46806MF_01644241, 1, (STRLEN(?targetMotifMatchCigarQ46806MF_01644241) - STRLEN(REPLACE(?targetMotifMatchCigarQ46806MF_01644241, CONCAT('^(?:[a-z]*(?:[A-Z]|-)){', STR(?step1251), '}'), '')))), '[^-]', ''))) AS ?step2252) . BIND(((?step2252 + ?targetMotifMatchRegionMatchBeginPositionMF_01644242) - 1) AS ?thisPositionOn87) . BIND(?thisPositionOn87 AS ?thisPositionOn88) . BIND(?this AS ?pfs1t253) . BIND(URI(CONCAT(STR(?thisSequence), '#position', STR(?thisPositionOn87))) AS ?pfsb85) . BIND(URI(CONCAT(STR(?thisSequence), '#position', STR(?thisPositionOn88))) AS ?pfse86) . FILTER ((SUBSTR(?thisSequenceValue, ?thisPositionOn87, 1) = 'K')) . BIND(URI(CONCAT(STR(?this), '#MF_01644a84')) AS ?annotation84) . BIND(?this AS ?pfs83) . } }