CONSTRUCT { _:608036 up:source unirule:MF_01687 . _:608037 up:source unirule:MF_01687 . _:608038 up:source unirule:MF_01687 . _:608039 up:source unirule:MF_01687 . _:608040 up:source unirule:MF_01687 . _:608041 up:source unirule:MF_01687 . _:608042 up:source unirule:MF_01687 . _:608043 up:source unirule:MF_01687 . _:608044 up:source unirule:MF_01687 . _:608045 up:source unirule:MF_01687 . _:608046 up:source unirule:MF_01687 . _:608047 up:source unirule:MF_01687 . _:608048 up:source unirule:MF_01687 . _:608049 up:source unirule:MF_01687 . _:608050 up:source unirule:MF_01687 . _:608051 up:source unirule:MF_01687 . _:608052 up:source unirule:MF_01687 . _:608053 up:source unirule:MF_01687 . _:608054 up:source unirule:MF_01687 . _:608055 up:source unirule:MF_01687 . _:608056 up:source unirule:MF_01687 . _:608057 up:source unirule:MF_01687 . _:608058 up:source unirule:MF_01687 . _:608059 up:source unirule:MF_01687 . _:608060 up:source unirule:MF_01687 . _:608061 up:source unirule:MF_01687 . _:608062 up:source unirule:MF_01687 . _:608063 up:source unirule:MF_01687 . _:608064 up:source unirule:MF_01687 . _:608065 up:source unirule:MF_01687 . _:608066 up:source unirule:MF_01687 . _:608067 up:source unirule:MF_01687 . ?this up:alternativeName ?name1 ; up:annotation ?annotation3 , ?annotation5 , ?annotation6 , ?annotation7 , ?annotation8 ; up:classifiedWith GO:0000287 , GO:0016798 , keyword:326 , keyword:378 , keyword:460 , keyword:479 , keyword:915 ; up:recommendedName ?name0 . ?name0 up:ecName '3.2.1.23' ; up:fullName 'Beta-galactosidase' ; up:shortName 'Beta-gal' ; rdf:type up:Structured_Name . ?name1 up:fullName 'Lactase' ; rdf:type up:Structured_Name . ?gene2 skos:prefLabel 'lacZ' . ?annotation3 up:activity ?activity4 ; rdf:type up:Catalytic_Activity_Annotation . ?activity4 up:enzymeClass <http://purl.uniprot.org/enzyme/3.2.1.23>. ?annotation5 up:cofactor chebi:18420 ; rdf:type up:Cofactor_Annotation ; rdfs:comment 'Binds 2 magnesium ions per monomer.' . ?annotation6 up:cofactor chebi:29101 ; rdf:type up:Cofactor_Annotation ; rdfs:comment 'Binds 1 sodium ion per monomer.' . ?annotation7 a up:Subunit_Annotation ; rdfs:comment 'Homotetramer.' . ?annotation8 a up:Similarity_Annotation ; rdfs:comment 'Belongs to the glycosyl hydrolase 2 family.' . ?pfs9 up:annotation ?annotation10 . ?annotation10 faldo:begin ?pfsb11 ; faldo:end ?pfse12 ; up:ligand ?ligand13 ; rdf:type up:Binding_Site_Annotation . ?pfsb11 faldo:position ?thisPositionOn15 ; rdf:type faldo:ExactPosition . ?pfse12 faldo:position ?thisPositionOn16 ; rdf:type faldo:ExactPosition . ?ligand13 rdfs:subClassOf ?molecule14 . ?molecule14 rdfs:label 'substrate' . ?pfs17 up:annotation ?annotation18 . ?annotation18 faldo:begin ?pfsb19 ; faldo:end ?pfse20 ; rdf:type up:Active_Site_Annotation ; rdfs:comment 'Proton donor' . ?pfsb19 faldo:position ?thisPositionOn21 ; rdf:type faldo:ExactPosition . ?pfse20 faldo:position ?thisPositionOn22 ; rdf:type faldo:ExactPosition . ?pfs23 up:annotation ?annotation24 . ?annotation24 faldo:begin ?pfsb25 ; faldo:end ?pfse26 ; rdf:type up:Active_Site_Annotation ; rdfs:comment 'Nucleophile' . ?pfsb25 faldo:position ?thisPositionOn27 ; rdf:type faldo:ExactPosition . ?pfse26 faldo:position ?thisPositionOn28 ; rdf:type faldo:ExactPosition . ?pfs29 up:annotation ?annotation30 . ?annotation30 faldo:begin ?pfsb31 ; faldo:end ?pfse32 ; up:ligand ?ligand33 ; rdf:type up:Binding_Site_Annotation . ?pfsb31 faldo:position ?thisPositionOn34 ; rdf:type faldo:ExactPosition . ?pfse32 faldo:position ?thisPositionOn35 ; rdf:type faldo:ExactPosition . ?ligand33 rdfs:subClassOf chebi:29101 . ?pfs36 up:annotation ?annotation37 . ?annotation37 faldo:begin ?pfsb38 ; faldo:end ?pfse39 ; up:ligand ?ligand40 ; rdf:type up:Binding_Site_Annotation . ?pfsb38 faldo:position ?thisPositionOn41 ; rdf:type faldo:ExactPosition . ?pfse39 faldo:position ?thisPositionOn42 ; rdf:type faldo:ExactPosition . ?ligand40 rdfs:subClassOf chebi:18420 . ?pfs43 up:annotation ?annotation44 . ?annotation44 faldo:begin ?pfsb45 ; faldo:end ?pfse46 ; up:ligand ?ligand47 ; rdf:type up:Binding_Site_Annotation . ?pfsb45 faldo:position ?thisPositionOn48 ; rdf:type faldo:ExactPosition . ?pfse46 faldo:position ?thisPositionOn49 ; rdf:type faldo:ExactPosition . ?ligand47 rdfs:subClassOf chebi:18420 . ?pfs50 up:annotation ?annotation51 . ?annotation51 faldo:begin ?pfsb52 ; faldo:end ?pfse53 ; up:ligand ?ligand54 ; rdf:type up:Binding_Site_Annotation . ?pfsb52 faldo:position ?thisPositionOn55 ; rdf:type faldo:ExactPosition . ?pfse53 faldo:position ?thisPositionOn56 ; rdf:type faldo:ExactPosition . ?ligand54 rdfs:subClassOf chebi:18420 . ?pfs57 up:annotation ?annotation58 . ?annotation58 faldo:begin ?pfsb59 ; faldo:end ?pfse60 ; up:ligand ?ligand61 ; rdf:type up:Binding_Site_Annotation . ?pfsb59 faldo:position ?thisPositionOn62 ; rdf:type faldo:ExactPosition . ?pfse60 faldo:position ?thisPositionOn63 ; rdf:type faldo:ExactPosition . ?ligand61 rdfs:subClassOf chebi:18420 . ?pfs64 up:annotation ?annotation65 . ?annotation65 faldo:begin ?pfsb66 ; faldo:end ?pfse67 ; up:ligand ?ligand68 ; rdf:type up:Binding_Site_Annotation . ?pfsb66 faldo:position ?thisPositionOn69 ; rdf:type faldo:ExactPosition . ?pfse67 faldo:position ?thisPositionOn70 ; rdf:type faldo:ExactPosition . ?ligand68 rdfs:subClassOf chebi:29101 . ?pfs71 up:annotation ?annotation72 . ?annotation72 faldo:begin ?pfsb73 ; faldo:end ?pfse74 ; up:ligand ?ligand75 ; rdf:type up:Binding_Site_Annotation . ?pfsb73 faldo:position ?thisPositionOn76 ; rdf:type faldo:ExactPosition . ?pfse74 faldo:position ?thisPositionOn77 ; rdf:type faldo:ExactPosition . ?ligand75 rdfs:subClassOf chebi:29101 . ?pfs78 up:annotation ?annotation79 . ?annotation79 faldo:begin ?pfsb80 ; faldo:end ?pfse81 ; up:ligand ?ligand82 ; rdf:type up:Binding_Site_Annotation . ?pfsb80 faldo:position ?thisPositionOn84 ; rdf:type faldo:ExactPosition . ?pfse81 faldo:position ?thisPositionOn85 ; rdf:type faldo:ExactPosition . ?ligand82 rdfs:subClassOf ?molecule83 . ?molecule83 rdfs:label 'substrate' . ?pfs86 up:annotation ?annotation87 . ?annotation87 faldo:begin ?pfsb88 ; faldo:end ?pfse89 ; up:ligand ?ligand90 ; rdf:type up:Binding_Site_Annotation . ?pfsb88 faldo:position ?thisPositionOn92 ; rdf:type faldo:ExactPosition . ?pfse89 faldo:position ?thisPositionOn93 ; rdf:type faldo:ExactPosition . ?ligand90 rdfs:subClassOf ?molecule91 . ?molecule91 rdfs:label 'substrate' . ?pfs94 up:annotation ?annotation95 . ?annotation95 faldo:begin ?pfsb96 ; faldo:end ?pfse97 ; up:ligand ?ligand98 ; rdf:type up:Binding_Site_Annotation . ?pfsb96 faldo:position ?thisPositionOn100 ; rdf:type faldo:ExactPosition . ?pfse97 faldo:position ?thisPositionOn101 ; rdf:type faldo:ExactPosition . ?ligand98 rdfs:subClassOf ?molecule99 . ?molecule99 rdfs:label 'substrate' . ?pfs102 up:annotation ?annotation103 . ?annotation103 faldo:begin ?pfsb104 ; faldo:end ?pfse105 ; up:ligand ?ligand106 ; rdf:type up:Binding_Site_Annotation . ?pfsb104 faldo:position ?thisPositionOn108 ; rdf:type faldo:ExactPosition . ?pfse105 faldo:position ?thisPositionOn109 ; rdf:type faldo:ExactPosition . ?ligand106 rdfs:subClassOf ?molecule107 . ?molecule107 rdfs:label 'substrate' . ?pfs110 up:annotation ?annotation111 . ?annotation111 faldo:begin ?pfsb112 ; faldo:end ?pfse113 ; up:ligand ?ligand114 ; rdf:type up:Binding_Site_Annotation . ?pfsb112 faldo:position ?thisPositionOn116 ; rdf:type faldo:ExactPosition . ?pfse113 faldo:position ?thisPositionOn117 ; rdf:type faldo:ExactPosition . ?ligand114 rdfs:subClassOf ?molecule115 . ?molecule115 rdfs:label 'substrate' . ?pfs118 up:annotation ?annotation119 . ?annotation119 faldo:begin ?pfsb120 ; faldo:end ?pfse121 ; rdf:type up:Site_Annotation ; rdfs:comment 'Transition state stabilizer' . ?pfsb120 faldo:position ?thisPositionOn122 ; rdf:type faldo:ExactPosition . ?pfse121 faldo:position ?thisPositionOn123 ; rdf:type faldo:ExactPosition . ?pfs124 up:annotation ?annotation125 . ?annotation125 faldo:begin ?pfsb126 ; faldo:end ?pfse127 ; rdf:type up:Site_Annotation ; rdfs:comment 'Transition state stabilizer' . ?pfsb126 faldo:position ?thisPositionOn128 ; rdf:type faldo:ExactPosition . ?pfse127 faldo:position ?thisPositionOn129 ; rdf:type faldo:ExactPosition . _:608068 a rdf:Statement ; up:attribution _:608036 ; rdf:subject ?this ; rdf:predicate up:recommendedName ; rdf:object ?name0 . _:608069 a rdf:Statement ; up:attribution _:608037 ; rdf:subject ?this ; rdf:predicate up:alternativeName ; rdf:object ?name1 . _:608070 a rdf:Statement ; up:attribution _:608038 ; rdf:subject ?gene2 ; rdf:predicate up:encodedBy ; rdf:object ?gene2 . _:608071 a rdf:Statement ; up:attribution _:608039 ; rdf:subject ?this ; rdf:predicate up:annotation ; rdf:object ?annotation3 . _:608072 a rdf:Statement ; up:attribution _:608040 ; rdf:subject ?this ; rdf:predicate up:annotation ; rdf:object ?annotation5 . _:608073 a rdf:Statement ; up:attribution _:608041 ; rdf:subject ?this ; rdf:predicate up:annotation ; rdf:object ?annotation6 . _:608074 a rdf:Statement ; up:attribution _:608042 ; rdf:subject ?this ; rdf:predicate up:annotation ; rdf:object ?annotation7 . _:608075 a rdf:Statement ; up:attribution _:608043 ; rdf:subject ?this ; rdf:predicate up:annotation ; rdf:object ?annotation8 . _:608076 a rdf:Statement ; up:attribution _:608044 ; rdf:subject ?this ; rdf:predicate up:classifiedWith ; rdf:object keyword:326 . _:608077 a rdf:Statement ; up:attribution _:608045 ; rdf:subject ?this ; rdf:predicate up:classifiedWith ; rdf:object keyword:378 . _:608078 a rdf:Statement ; up:attribution _:608046 ; rdf:subject ?this ; rdf:predicate up:classifiedWith ; rdf:object keyword:460 . _:608079 a rdf:Statement ; up:attribution _:608047 ; rdf:subject ?this ; rdf:predicate up:classifiedWith ; rdf:object keyword:479 . _:608080 a rdf:Statement ; up:attribution _:608048 ; rdf:subject ?this ; rdf:predicate up:classifiedWith ; rdf:object keyword:915 . _:608081 a rdf:Statement ; up:attribution _:608049 ; rdf:subject ?this ; rdf:predicate up:classifiedWith ; rdf:object GO:0000287 . _:608082 a rdf:Statement ; up:attribution _:608050 ; rdf:subject ?this ; rdf:predicate up:classifiedWith ; rdf:object GO:0016798 . _:608083 a rdf:Statement ; up:source unirule:MF_01687 ; rdf:subject ?pfs9 ; rdf:predicate up:annotation ; rdf:object ?annotation10 . _:608084 a rdf:Statement ; up:attribution _:608051 ; rdf:subject ?pfs9 ; rdf:predicate up:annotation ; rdf:object ?annotation10 . _:608085 a rdf:Statement ; up:source unirule:MF_01687 ; rdf:subject ?pfs17 ; rdf:predicate up:annotation ; rdf:object ?annotation18 . _:608086 a rdf:Statement ; up:attribution _:608052 ; rdf:subject ?pfs17 ; rdf:predicate up:annotation ; rdf:object ?annotation18 . _:608087 a rdf:Statement ; up:source unirule:MF_01687 ; rdf:subject ?pfs23 ; rdf:predicate up:annotation ; rdf:object ?annotation24 . _:608088 a rdf:Statement ; up:attribution _:608053 ; rdf:subject ?pfs23 ; rdf:predicate up:annotation ; rdf:object ?annotation24 . _:608089 a rdf:Statement ; up:source unirule:MF_01687 ; rdf:subject ?pfs29 ; rdf:predicate up:annotation ; rdf:object ?annotation30 . _:608090 a rdf:Statement ; up:attribution _:608054 ; rdf:subject ?pfs29 ; rdf:predicate up:annotation ; rdf:object ?annotation30 . _:608091 a rdf:Statement ; up:source unirule:MF_01687 ; rdf:subject ?pfs36 ; rdf:predicate up:annotation ; rdf:object ?annotation37 . _:608092 a rdf:Statement ; up:attribution _:608055 ; rdf:subject ?pfs36 ; rdf:predicate up:annotation ; rdf:object ?annotation37 . _:608093 a rdf:Statement ; up:source unirule:MF_01687 ; rdf:subject ?pfs43 ; rdf:predicate up:annotation ; rdf:object ?annotation44 . _:608094 a rdf:Statement ; up:attribution _:608056 ; rdf:subject ?pfs43 ; rdf:predicate up:annotation ; rdf:object ?annotation44 . _:608095 a rdf:Statement ; up:source unirule:MF_01687 ; rdf:subject ?pfs50 ; rdf:predicate up:annotation ; rdf:object ?annotation51 . _:608096 a rdf:Statement ; up:attribution _:608057 ; rdf:subject ?pfs50 ; rdf:predicate up:annotation ; rdf:object ?annotation51 . _:608097 a rdf:Statement ; up:source unirule:MF_01687 ; rdf:subject ?pfs57 ; rdf:predicate up:annotation ; rdf:object ?annotation58 . _:608098 a rdf:Statement ; up:attribution _:608058 ; rdf:subject ?pfs57 ; rdf:predicate up:annotation ; rdf:object ?annotation58 . _:608099 a rdf:Statement ; up:source unirule:MF_01687 ; rdf:subject ?pfs64 ; rdf:predicate up:annotation ; rdf:object ?annotation65 . _:608100 a rdf:Statement ; up:attribution _:608059 ; rdf:subject ?pfs64 ; rdf:predicate up:annotation ; rdf:object ?annotation65 . _:608101 a rdf:Statement ; up:source unirule:MF_01687 ; rdf:subject ?pfs71 ; rdf:predicate up:annotation ; rdf:object ?annotation72 . _:608102 a rdf:Statement ; up:attribution _:608060 ; rdf:subject ?pfs71 ; rdf:predicate up:annotation ; rdf:object ?annotation72 . _:608103 a rdf:Statement ; up:source unirule:MF_01687 ; rdf:subject ?pfs78 ; rdf:predicate up:annotation ; rdf:object ?annotation79 . _:608104 a rdf:Statement ; up:attribution _:608061 ; rdf:subject ?pfs78 ; rdf:predicate up:annotation ; rdf:object ?annotation79 . _:608105 a rdf:Statement ; up:source unirule:MF_01687 ; rdf:subject ?pfs86 ; rdf:predicate up:annotation ; rdf:object ?annotation87 . _:608106 a rdf:Statement ; up:attribution _:608062 ; rdf:subject ?pfs86 ; rdf:predicate up:annotation ; rdf:object ?annotation87 . _:608107 a rdf:Statement ; up:source unirule:MF_01687 ; rdf:subject ?pfs94 ; rdf:predicate up:annotation ; rdf:object ?annotation95 . _:608108 a rdf:Statement ; up:attribution _:608063 ; rdf:subject ?pfs94 ; rdf:predicate up:annotation ; rdf:object ?annotation95 . _:608109 a rdf:Statement ; up:source unirule:MF_01687 ; rdf:subject ?pfs102 ; rdf:predicate up:annotation ; rdf:object ?annotation103 . _:608110 a rdf:Statement ; up:attribution _:608064 ; rdf:subject ?pfs102 ; rdf:predicate up:annotation ; rdf:object ?annotation103 . _:608111 a rdf:Statement ; up:source unirule:MF_01687 ; rdf:subject ?pfs110 ; rdf:predicate up:annotation ; rdf:object ?annotation111 . _:608112 a rdf:Statement ; up:attribution _:608065 ; rdf:subject ?pfs110 ; rdf:predicate up:annotation ; rdf:object ?annotation111 . _:608113 a rdf:Statement ; up:source unirule:MF_01687 ; rdf:subject ?pfs118 ; rdf:predicate up:annotation ; rdf:object ?annotation119 . _:608114 a rdf:Statement ; up:attribution _:608066 ; rdf:subject ?pfs118 ; rdf:predicate up:annotation ; rdf:object ?annotation119 . _:608115 a rdf:Statement ; up:source unirule:MF_01687 ; rdf:subject ?pfs124 ; rdf:predicate up:annotation ; rdf:object ?annotation125 . _:608116 a rdf:Statement ; up:attribution _:608067 ; rdf:subject ?pfs124 ; rdf:predicate up:annotation ; rdf:object ?annotation125 . } WHERE { #baseURI: http://purl.uniprot.org/unirule/MF_01687 #Rule MF_01687 Created by:gkeller on:2009-02-19 Modified by:ecastro on:2022-11-19 ?this up:organism ?thisOrganism ; rdfs:seeAlso signature:MF_01687 . ?thisOrganism rdfs:subClassOf+ taxon:2 . BIND(URI(CONCAT(STR(?this), '#MF_01687a0')) AS ?name0) . BIND(URI(CONCAT(STR(?this), '#MF_01687a1')) AS ?name1) . BIND(URI(CONCAT(STR(?this), '#MF_01687a3')) AS ?annotation3) . BIND(URI(CONCAT(STR(?this), '#MF_01687a5')) AS ?annotation5) . BIND(URI(CONCAT(STR(?this), '#MF_01687a6')) AS ?annotation6) . BIND(URI(CONCAT(STR(?this), '#MF_01687a7')) AS ?annotation7) . BIND(URI(CONCAT(STR(?this), '#MF_01687a8')) AS ?annotation8) . OPTIONAL { ?this up:sequence ?thisSequence . ?thisSequence rdf:value ?thisSequenceValue . ?templateMotifMatch134 faldo:location ?templateMotifSequenceMatchRegionP00722135 ; edam:is_output_of ?templateMotifSequenceProfileAlignmentOperationP00722137 ; rdf:type edam:data_0869 ; rdf:value ?templateMotifCigarP00722MF_01687130 . ?templateMotifSequenceMatchRegionP00722135 faldo:begin ?templateMotifSequenceMatchBeginP00722136 . ?templateMotifSequenceMatchBeginP00722136 faldo:position ?templateMotifSequenceMatchBeginPositionP00722131 ; faldo:reference isoform:P00722-1 . ?templateMotifSequenceProfileAlignmentOperationP00722137 edam:has_input signature:MF_01687 ; rdf:type edam:operation_0300 . ?targetMotifMatch138 faldo:location ?targetMotifMatchRegionMatch139 ; edam:is_output_of ?targetMotifSequenceAlignmentOperationMF_01687141 ; rdf:type edam:data_0869 ; rdf:value ?targetMotifMatchCigarP00722MF_01687132 . ?targetMotifMatchRegionMatch139 faldo:begin ?targetMotifMatchRegionMatchBeginMF_01687140 . ?targetMotifMatchRegionMatchBeginMF_01687140 faldo:position ?targetMotifMatchRegionMatchBeginPositionMF_01687133 ; faldo:reference ?thisSequence . ?targetMotifSequenceAlignmentOperationMF_01687141 edam:has_input signature:MF_01687 ; rdf:type edam:operation_0300 . BIND(STRLEN(REPLACE(SUBSTR(?templateMotifCigarP00722MF_01687130, 1, (STRLEN(?templateMotifCigarP00722MF_01687130) - STRLEN(REPLACE(?templateMotifCigarP00722MF_01687130, CONCAT('^(?:-*[^-]){', STR(((538 - ?templateMotifSequenceMatchBeginPositionP00722131) + 1)), '}'), '')))), '[a-z]', '')) AS ?step1142) . BIND((STRLEN(SUBSTR(?targetMotifMatchCigarP00722MF_01687132, 1, (STRLEN(?targetMotifMatchCigarP00722MF_01687132) - STRLEN(REPLACE(?targetMotifMatchCigarP00722MF_01687132, CONCAT('^(?:[a-z]*(?:[A-Z]|-)){', STR(?step1142), '}'), ''))))) - STRLEN(REPLACE(SUBSTR(?targetMotifMatchCigarP00722MF_01687132, 1, (STRLEN(?targetMotifMatchCigarP00722MF_01687132) - STRLEN(REPLACE(?targetMotifMatchCigarP00722MF_01687132, CONCAT('^(?:[a-z]*(?:[A-Z]|-)){', STR(?step1142), '}'), '')))), '[^-]', ''))) AS ?step2143) . BIND(((?step2143 + ?targetMotifMatchRegionMatchBeginPositionMF_01687133) - 1) AS ?thisPositionOn15) . BIND(STRLEN(REPLACE(SUBSTR(?templateMotifCigarP00722MF_01687130, 1, (STRLEN(?templateMotifCigarP00722MF_01687130) - STRLEN(REPLACE(?templateMotifCigarP00722MF_01687130, CONCAT('^(?:-*[^-]){', STR(((541 - ?templateMotifSequenceMatchBeginPositionP00722131) + 1)), '}'), '')))), '[a-z]', '')) AS ?step1144) . BIND((STRLEN(SUBSTR(?targetMotifMatchCigarP00722MF_01687132, 1, (STRLEN(?targetMotifMatchCigarP00722MF_01687132) - STRLEN(REPLACE(?targetMotifMatchCigarP00722MF_01687132, CONCAT('^(?:[a-z]*(?:[A-Z]|-)){', STR(?step1144), '}'), ''))))) - STRLEN(REPLACE(SUBSTR(?targetMotifMatchCigarP00722MF_01687132, 1, (STRLEN(?targetMotifMatchCigarP00722MF_01687132) - STRLEN(REPLACE(?targetMotifMatchCigarP00722MF_01687132, CONCAT('^(?:[a-z]*(?:[A-Z]|-)){', STR(?step1144), '}'), '')))), '[^-]', ''))) AS ?step2145) . BIND(((?step2145 + ?targetMotifMatchRegionMatchBeginPositionMF_01687133) - 1) AS ?thisPositionOn16) . BIND(?this AS ?pfs1t146) . BIND(URI(CONCAT(STR(?thisSequence), '#position', STR(?thisPositionOn15))) AS ?pfsb11) . BIND(URI(CONCAT(STR(?thisSequence), '#position', STR(?thisPositionOn16))) AS ?pfse12) . FILTER ((SUBSTR(?thisSequenceValue, ?thisPositionOn15, (?thisPositionOn16 - ?thisPositionOn15)) = 'EYAH')) . BIND(URI(CONCAT(STR(?this), '#MF_01687a10')) AS ?annotation10) . BIND(?this AS ?pfs9) . } OPTIONAL { ?this up:sequence ?thisSequence . ?thisSequence rdf:value ?thisSequenceValue . ?templateMotifMatch151 faldo:location ?templateMotifSequenceMatchRegionP00722152 ; edam:is_output_of ?templateMotifSequenceProfileAlignmentOperationP00722154 ; rdf:type edam:data_0869 ; rdf:value ?templateMotifCigarP00722MF_01687147 . ?templateMotifSequenceMatchRegionP00722152 faldo:begin ?templateMotifSequenceMatchBeginP00722153 . ?templateMotifSequenceMatchBeginP00722153 faldo:position ?templateMotifSequenceMatchBeginPositionP00722148 ; faldo:reference isoform:P00722-1 . ?templateMotifSequenceProfileAlignmentOperationP00722154 edam:has_input signature:MF_01687 ; rdf:type edam:operation_0300 . ?targetMotifMatch155 faldo:location ?targetMotifMatchRegionMatch156 ; edam:is_output_of ?targetMotifSequenceAlignmentOperationMF_01687158 ; rdf:type edam:data_0869 ; rdf:value ?targetMotifMatchCigarP00722MF_01687149 . ?targetMotifMatchRegionMatch156 faldo:begin ?targetMotifMatchRegionMatchBeginMF_01687157 . ?targetMotifMatchRegionMatchBeginMF_01687157 faldo:position ?targetMotifMatchRegionMatchBeginPositionMF_01687150 ; faldo:reference ?thisSequence . ?targetMotifSequenceAlignmentOperationMF_01687158 edam:has_input signature:MF_01687 ; rdf:type edam:operation_0300 . BIND(STRLEN(REPLACE(SUBSTR(?templateMotifCigarP00722MF_01687147, 1, (STRLEN(?templateMotifCigarP00722MF_01687147) - STRLEN(REPLACE(?templateMotifCigarP00722MF_01687147, CONCAT('^(?:-*[^-]){', STR(((462 - ?templateMotifSequenceMatchBeginPositionP00722148) + 1)), '}'), '')))), '[a-z]', '')) AS ?step1159) . BIND((STRLEN(SUBSTR(?targetMotifMatchCigarP00722MF_01687149, 1, (STRLEN(?targetMotifMatchCigarP00722MF_01687149) - STRLEN(REPLACE(?targetMotifMatchCigarP00722MF_01687149, CONCAT('^(?:[a-z]*(?:[A-Z]|-)){', STR(?step1159), '}'), ''))))) - STRLEN(REPLACE(SUBSTR(?targetMotifMatchCigarP00722MF_01687149, 1, (STRLEN(?targetMotifMatchCigarP00722MF_01687149) - STRLEN(REPLACE(?targetMotifMatchCigarP00722MF_01687149, CONCAT('^(?:[a-z]*(?:[A-Z]|-)){', STR(?step1159), '}'), '')))), '[^-]', ''))) AS ?step2160) . BIND(((?step2160 + ?targetMotifMatchRegionMatchBeginPositionMF_01687150) - 1) AS ?thisPositionOn21) . BIND(?thisPositionOn21 AS ?thisPositionOn22) . BIND(?this AS ?pfs1t161) . BIND(URI(CONCAT(STR(?thisSequence), '#position', STR(?thisPositionOn21))) AS ?pfsb19) . BIND(URI(CONCAT(STR(?thisSequence), '#position', STR(?thisPositionOn22))) AS ?pfse20) . FILTER ((SUBSTR(?thisSequenceValue, ?thisPositionOn21, 1) = 'E')) . BIND(URI(CONCAT(STR(?this), '#MF_01687a18')) AS ?annotation18) . BIND(?this AS ?pfs17) . } OPTIONAL { ?this up:sequence ?thisSequence . ?thisSequence rdf:value ?thisSequenceValue . ?templateMotifMatch166 faldo:location ?templateMotifSequenceMatchRegionP00722167 ; edam:is_output_of ?templateMotifSequenceProfileAlignmentOperationP00722169 ; rdf:type edam:data_0869 ; rdf:value ?templateMotifCigarP00722MF_01687162 . ?templateMotifSequenceMatchRegionP00722167 faldo:begin ?templateMotifSequenceMatchBeginP00722168 . ?templateMotifSequenceMatchBeginP00722168 faldo:position ?templateMotifSequenceMatchBeginPositionP00722163 ; faldo:reference isoform:P00722-1 . ?templateMotifSequenceProfileAlignmentOperationP00722169 edam:has_input signature:MF_01687 ; rdf:type edam:operation_0300 . ?targetMotifMatch170 faldo:location ?targetMotifMatchRegionMatch171 ; edam:is_output_of ?targetMotifSequenceAlignmentOperationMF_01687173 ; rdf:type edam:data_0869 ; rdf:value ?targetMotifMatchCigarP00722MF_01687164 . ?targetMotifMatchRegionMatch171 faldo:begin ?targetMotifMatchRegionMatchBeginMF_01687172 . ?targetMotifMatchRegionMatchBeginMF_01687172 faldo:position ?targetMotifMatchRegionMatchBeginPositionMF_01687165 ; faldo:reference ?thisSequence . ?targetMotifSequenceAlignmentOperationMF_01687173 edam:has_input signature:MF_01687 ; rdf:type edam:operation_0300 . BIND(STRLEN(REPLACE(SUBSTR(?templateMotifCigarP00722MF_01687162, 1, (STRLEN(?templateMotifCigarP00722MF_01687162) - STRLEN(REPLACE(?templateMotifCigarP00722MF_01687162, CONCAT('^(?:-*[^-]){', STR(((538 - ?templateMotifSequenceMatchBeginPositionP00722163) + 1)), '}'), '')))), '[a-z]', '')) AS ?step1174) . BIND((STRLEN(SUBSTR(?targetMotifMatchCigarP00722MF_01687164, 1, (STRLEN(?targetMotifMatchCigarP00722MF_01687164) - STRLEN(REPLACE(?targetMotifMatchCigarP00722MF_01687164, CONCAT('^(?:[a-z]*(?:[A-Z]|-)){', STR(?step1174), '}'), ''))))) - STRLEN(REPLACE(SUBSTR(?targetMotifMatchCigarP00722MF_01687164, 1, (STRLEN(?targetMotifMatchCigarP00722MF_01687164) - STRLEN(REPLACE(?targetMotifMatchCigarP00722MF_01687164, CONCAT('^(?:[a-z]*(?:[A-Z]|-)){', STR(?step1174), '}'), '')))), '[^-]', ''))) AS ?step2175) . BIND(((?step2175 + ?targetMotifMatchRegionMatchBeginPositionMF_01687165) - 1) AS ?thisPositionOn27) . BIND(?thisPositionOn27 AS ?thisPositionOn28) . BIND(?this AS ?pfs1t176) . BIND(URI(CONCAT(STR(?thisSequence), '#position', STR(?thisPositionOn27))) AS ?pfsb25) . BIND(URI(CONCAT(STR(?thisSequence), '#position', STR(?thisPositionOn28))) AS ?pfse26) . FILTER ((SUBSTR(?thisSequenceValue, ?thisPositionOn27, 1) = 'E')) . BIND(URI(CONCAT(STR(?this), '#MF_01687a24')) AS ?annotation24) . BIND(?this AS ?pfs23) . } OPTIONAL { ?this up:sequence ?thisSequence . ?thisSequence rdf:value ?thisSequenceValue . ?templateMotifMatch181 faldo:location ?templateMotifSequenceMatchRegionP00722182 ; edam:is_output_of ?templateMotifSequenceProfileAlignmentOperationP00722184 ; rdf:type edam:data_0869 ; rdf:value ?templateMotifCigarP00722MF_01687177 . ?templateMotifSequenceMatchRegionP00722182 faldo:begin ?templateMotifSequenceMatchBeginP00722183 . ?templateMotifSequenceMatchBeginP00722183 faldo:position ?templateMotifSequenceMatchBeginPositionP00722178 ; faldo:reference isoform:P00722-1 . ?templateMotifSequenceProfileAlignmentOperationP00722184 edam:has_input signature:MF_01687 ; rdf:type edam:operation_0300 . ?targetMotifMatch185 faldo:location ?targetMotifMatchRegionMatch186 ; edam:is_output_of ?targetMotifSequenceAlignmentOperationMF_01687188 ; rdf:type edam:data_0869 ; rdf:value ?targetMotifMatchCigarP00722MF_01687179 . ?targetMotifMatchRegionMatch186 faldo:begin ?targetMotifMatchRegionMatchBeginMF_01687187 . ?targetMotifMatchRegionMatchBeginMF_01687187 faldo:position ?targetMotifMatchRegionMatchBeginPositionMF_01687180 ; faldo:reference ?thisSequence . ?targetMotifSequenceAlignmentOperationMF_01687188 edam:has_input signature:MF_01687 ; rdf:type edam:operation_0300 . BIND(STRLEN(REPLACE(SUBSTR(?templateMotifCigarP00722MF_01687177, 1, (STRLEN(?templateMotifCigarP00722MF_01687177) - STRLEN(REPLACE(?templateMotifCigarP00722MF_01687177, CONCAT('^(?:-*[^-]){', STR(((202 - ?templateMotifSequenceMatchBeginPositionP00722178) + 1)), '}'), '')))), '[a-z]', '')) AS ?step1189) . BIND((STRLEN(SUBSTR(?targetMotifMatchCigarP00722MF_01687179, 1, (STRLEN(?targetMotifMatchCigarP00722MF_01687179) - STRLEN(REPLACE(?targetMotifMatchCigarP00722MF_01687179, CONCAT('^(?:[a-z]*(?:[A-Z]|-)){', STR(?step1189), '}'), ''))))) - STRLEN(REPLACE(SUBSTR(?targetMotifMatchCigarP00722MF_01687179, 1, (STRLEN(?targetMotifMatchCigarP00722MF_01687179) - STRLEN(REPLACE(?targetMotifMatchCigarP00722MF_01687179, CONCAT('^(?:[a-z]*(?:[A-Z]|-)){', STR(?step1189), '}'), '')))), '[^-]', ''))) AS ?step2190) . BIND(((?step2190 + ?targetMotifMatchRegionMatchBeginPositionMF_01687180) - 1) AS ?thisPositionOn34) . BIND(?thisPositionOn34 AS ?thisPositionOn35) . BIND(?this AS ?pfs1t191) . BIND(URI(CONCAT(STR(?thisSequence), '#position', STR(?thisPositionOn34))) AS ?pfsb31) . BIND(URI(CONCAT(STR(?thisSequence), '#position', STR(?thisPositionOn35))) AS ?pfse32) . FILTER ((SUBSTR(?thisSequenceValue, ?thisPositionOn34, 1) = 'D')) . BIND(URI(CONCAT(STR(?this), '#MF_01687a30')) AS ?annotation30) . BIND(?this AS ?pfs29) . } OPTIONAL { ?this up:sequence ?thisSequence . ?thisSequence rdf:value ?thisSequenceValue . ?templateMotifMatch196 faldo:location ?templateMotifSequenceMatchRegionP00722197 ; edam:is_output_of ?templateMotifSequenceProfileAlignmentOperationP00722199 ; rdf:type edam:data_0869 ; rdf:value ?templateMotifCigarP00722MF_01687192 . ?templateMotifSequenceMatchRegionP00722197 faldo:begin ?templateMotifSequenceMatchBeginP00722198 . ?templateMotifSequenceMatchBeginP00722198 faldo:position ?templateMotifSequenceMatchBeginPositionP00722193 ; faldo:reference isoform:P00722-1 . ?templateMotifSequenceProfileAlignmentOperationP00722199 edam:has_input signature:MF_01687 ; rdf:type edam:operation_0300 . ?targetMotifMatch200 faldo:location ?targetMotifMatchRegionMatch201 ; edam:is_output_of ?targetMotifSequenceAlignmentOperationMF_01687203 ; rdf:type edam:data_0869 ; rdf:value ?targetMotifMatchCigarP00722MF_01687194 . ?targetMotifMatchRegionMatch201 faldo:begin ?targetMotifMatchRegionMatchBeginMF_01687202 . ?targetMotifMatchRegionMatchBeginMF_01687202 faldo:position ?targetMotifMatchRegionMatchBeginPositionMF_01687195 ; faldo:reference ?thisSequence . ?targetMotifSequenceAlignmentOperationMF_01687203 edam:has_input signature:MF_01687 ; rdf:type edam:operation_0300 . BIND(STRLEN(REPLACE(SUBSTR(?templateMotifCigarP00722MF_01687192, 1, (STRLEN(?templateMotifCigarP00722MF_01687192) - STRLEN(REPLACE(?templateMotifCigarP00722MF_01687192, CONCAT('^(?:-*[^-]){', STR(((417 - ?templateMotifSequenceMatchBeginPositionP00722193) + 1)), '}'), '')))), '[a-z]', '')) AS ?step1204) . BIND((STRLEN(SUBSTR(?targetMotifMatchCigarP00722MF_01687194, 1, (STRLEN(?targetMotifMatchCigarP00722MF_01687194) - STRLEN(REPLACE(?targetMotifMatchCigarP00722MF_01687194, CONCAT('^(?:[a-z]*(?:[A-Z]|-)){', STR(?step1204), '}'), ''))))) - STRLEN(REPLACE(SUBSTR(?targetMotifMatchCigarP00722MF_01687194, 1, (STRLEN(?targetMotifMatchCigarP00722MF_01687194) - STRLEN(REPLACE(?targetMotifMatchCigarP00722MF_01687194, CONCAT('^(?:[a-z]*(?:[A-Z]|-)){', STR(?step1204), '}'), '')))), '[^-]', ''))) AS ?step2205) . BIND(((?step2205 + ?targetMotifMatchRegionMatchBeginPositionMF_01687195) - 1) AS ?thisPositionOn41) . BIND(?thisPositionOn41 AS ?thisPositionOn42) . BIND(?this AS ?pfs1t206) . BIND(URI(CONCAT(STR(?thisSequence), '#position', STR(?thisPositionOn41))) AS ?pfsb38) . BIND(URI(CONCAT(STR(?thisSequence), '#position', STR(?thisPositionOn42))) AS ?pfse39) . FILTER ((SUBSTR(?thisSequenceValue, ?thisPositionOn41, 1) = 'E')) . BIND(URI(CONCAT(STR(?this), '#MF_01687a37')) AS ?annotation37) . BIND(?this AS ?pfs36) . } OPTIONAL { ?this up:sequence ?thisSequence . ?thisSequence rdf:value ?thisSequenceValue . ?templateMotifMatch211 faldo:location ?templateMotifSequenceMatchRegionP00722212 ; edam:is_output_of ?templateMotifSequenceProfileAlignmentOperationP00722214 ; rdf:type edam:data_0869 ; rdf:value ?templateMotifCigarP00722MF_01687207 . ?templateMotifSequenceMatchRegionP00722212 faldo:begin ?templateMotifSequenceMatchBeginP00722213 . ?templateMotifSequenceMatchBeginP00722213 faldo:position ?templateMotifSequenceMatchBeginPositionP00722208 ; faldo:reference isoform:P00722-1 . ?templateMotifSequenceProfileAlignmentOperationP00722214 edam:has_input signature:MF_01687 ; rdf:type edam:operation_0300 . ?targetMotifMatch215 faldo:location ?targetMotifMatchRegionMatch216 ; edam:is_output_of ?targetMotifSequenceAlignmentOperationMF_01687218 ; rdf:type edam:data_0869 ; rdf:value ?targetMotifMatchCigarP00722MF_01687209 . ?targetMotifMatchRegionMatch216 faldo:begin ?targetMotifMatchRegionMatchBeginMF_01687217 . ?targetMotifMatchRegionMatchBeginMF_01687217 faldo:position ?targetMotifMatchRegionMatchBeginPositionMF_01687210 ; faldo:reference ?thisSequence . ?targetMotifSequenceAlignmentOperationMF_01687218 edam:has_input signature:MF_01687 ; rdf:type edam:operation_0300 . BIND(STRLEN(REPLACE(SUBSTR(?templateMotifCigarP00722MF_01687207, 1, (STRLEN(?templateMotifCigarP00722MF_01687207) - STRLEN(REPLACE(?templateMotifCigarP00722MF_01687207, CONCAT('^(?:-*[^-]){', STR(((419 - ?templateMotifSequenceMatchBeginPositionP00722208) + 1)), '}'), '')))), '[a-z]', '')) AS ?step1219) . BIND((STRLEN(SUBSTR(?targetMotifMatchCigarP00722MF_01687209, 1, (STRLEN(?targetMotifMatchCigarP00722MF_01687209) - STRLEN(REPLACE(?targetMotifMatchCigarP00722MF_01687209, CONCAT('^(?:[a-z]*(?:[A-Z]|-)){', STR(?step1219), '}'), ''))))) - STRLEN(REPLACE(SUBSTR(?targetMotifMatchCigarP00722MF_01687209, 1, (STRLEN(?targetMotifMatchCigarP00722MF_01687209) - STRLEN(REPLACE(?targetMotifMatchCigarP00722MF_01687209, CONCAT('^(?:[a-z]*(?:[A-Z]|-)){', STR(?step1219), '}'), '')))), '[^-]', ''))) AS ?step2220) . BIND(((?step2220 + ?targetMotifMatchRegionMatchBeginPositionMF_01687210) - 1) AS ?thisPositionOn48) . BIND(?thisPositionOn48 AS ?thisPositionOn49) . BIND(?this AS ?pfs1t221) . BIND(URI(CONCAT(STR(?thisSequence), '#position', STR(?thisPositionOn48))) AS ?pfsb45) . BIND(URI(CONCAT(STR(?thisSequence), '#position', STR(?thisPositionOn49))) AS ?pfse46) . FILTER ((SUBSTR(?thisSequenceValue, ?thisPositionOn48, 1) = 'H')) . BIND(URI(CONCAT(STR(?this), '#MF_01687a44')) AS ?annotation44) . BIND(?this AS ?pfs43) . } OPTIONAL { ?this up:sequence ?thisSequence . ?thisSequence rdf:value ?thisSequenceValue . ?templateMotifMatch226 faldo:location ?templateMotifSequenceMatchRegionP00722227 ; edam:is_output_of ?templateMotifSequenceProfileAlignmentOperationP00722229 ; rdf:type edam:data_0869 ; rdf:value ?templateMotifCigarP00722MF_01687222 . ?templateMotifSequenceMatchRegionP00722227 faldo:begin ?templateMotifSequenceMatchBeginP00722228 . ?templateMotifSequenceMatchBeginP00722228 faldo:position ?templateMotifSequenceMatchBeginPositionP00722223 ; faldo:reference isoform:P00722-1 . ?templateMotifSequenceProfileAlignmentOperationP00722229 edam:has_input signature:MF_01687 ; rdf:type edam:operation_0300 . ?targetMotifMatch230 faldo:location ?targetMotifMatchRegionMatch231 ; edam:is_output_of ?targetMotifSequenceAlignmentOperationMF_01687233 ; rdf:type edam:data_0869 ; rdf:value ?targetMotifMatchCigarP00722MF_01687224 . ?targetMotifMatchRegionMatch231 faldo:begin ?targetMotifMatchRegionMatchBeginMF_01687232 . ?targetMotifMatchRegionMatchBeginMF_01687232 faldo:position ?targetMotifMatchRegionMatchBeginPositionMF_01687225 ; faldo:reference ?thisSequence . ?targetMotifSequenceAlignmentOperationMF_01687233 edam:has_input signature:MF_01687 ; rdf:type edam:operation_0300 . BIND(STRLEN(REPLACE(SUBSTR(?templateMotifCigarP00722MF_01687222, 1, (STRLEN(?templateMotifCigarP00722MF_01687222) - STRLEN(REPLACE(?templateMotifCigarP00722MF_01687222, CONCAT('^(?:-*[^-]){', STR(((462 - ?templateMotifSequenceMatchBeginPositionP00722223) + 1)), '}'), '')))), '[a-z]', '')) AS ?step1234) . BIND((STRLEN(SUBSTR(?targetMotifMatchCigarP00722MF_01687224, 1, (STRLEN(?targetMotifMatchCigarP00722MF_01687224) - STRLEN(REPLACE(?targetMotifMatchCigarP00722MF_01687224, CONCAT('^(?:[a-z]*(?:[A-Z]|-)){', STR(?step1234), '}'), ''))))) - STRLEN(REPLACE(SUBSTR(?targetMotifMatchCigarP00722MF_01687224, 1, (STRLEN(?targetMotifMatchCigarP00722MF_01687224) - STRLEN(REPLACE(?targetMotifMatchCigarP00722MF_01687224, CONCAT('^(?:[a-z]*(?:[A-Z]|-)){', STR(?step1234), '}'), '')))), '[^-]', ''))) AS ?step2235) . BIND(((?step2235 + ?targetMotifMatchRegionMatchBeginPositionMF_01687225) - 1) AS ?thisPositionOn55) . BIND(?thisPositionOn55 AS ?thisPositionOn56) . BIND(?this AS ?pfs1t236) . BIND(URI(CONCAT(STR(?thisSequence), '#position', STR(?thisPositionOn55))) AS ?pfsb52) . BIND(URI(CONCAT(STR(?thisSequence), '#position', STR(?thisPositionOn56))) AS ?pfse53) . FILTER ((SUBSTR(?thisSequenceValue, ?thisPositionOn55, 1) = 'E')) . BIND(URI(CONCAT(STR(?this), '#MF_01687a51')) AS ?annotation51) . BIND(?this AS ?pfs50) . } OPTIONAL { ?this up:sequence ?thisSequence . ?thisSequence rdf:value ?thisSequenceValue . ?templateMotifMatch241 faldo:location ?templateMotifSequenceMatchRegionP00722242 ; edam:is_output_of ?templateMotifSequenceProfileAlignmentOperationP00722244 ; rdf:type edam:data_0869 ; rdf:value ?templateMotifCigarP00722MF_01687237 . ?templateMotifSequenceMatchRegionP00722242 faldo:begin ?templateMotifSequenceMatchBeginP00722243 . ?templateMotifSequenceMatchBeginP00722243 faldo:position ?templateMotifSequenceMatchBeginPositionP00722238 ; faldo:reference isoform:P00722-1 . ?templateMotifSequenceProfileAlignmentOperationP00722244 edam:has_input signature:MF_01687 ; rdf:type edam:operation_0300 . ?targetMotifMatch245 faldo:location ?targetMotifMatchRegionMatch246 ; edam:is_output_of ?targetMotifSequenceAlignmentOperationMF_01687248 ; rdf:type edam:data_0869 ; rdf:value ?targetMotifMatchCigarP00722MF_01687239 . ?targetMotifMatchRegionMatch246 faldo:begin ?targetMotifMatchRegionMatchBeginMF_01687247 . ?targetMotifMatchRegionMatchBeginMF_01687247 faldo:position ?targetMotifMatchRegionMatchBeginPositionMF_01687240 ; faldo:reference ?thisSequence . ?targetMotifSequenceAlignmentOperationMF_01687248 edam:has_input signature:MF_01687 ; rdf:type edam:operation_0300 . BIND(STRLEN(REPLACE(SUBSTR(?templateMotifCigarP00722MF_01687237, 1, (STRLEN(?templateMotifCigarP00722MF_01687237) - STRLEN(REPLACE(?templateMotifCigarP00722MF_01687237, CONCAT('^(?:-*[^-]){', STR(((598 - ?templateMotifSequenceMatchBeginPositionP00722238) + 1)), '}'), '')))), '[a-z]', '')) AS ?step1249) . BIND((STRLEN(SUBSTR(?targetMotifMatchCigarP00722MF_01687239, 1, (STRLEN(?targetMotifMatchCigarP00722MF_01687239) - STRLEN(REPLACE(?targetMotifMatchCigarP00722MF_01687239, CONCAT('^(?:[a-z]*(?:[A-Z]|-)){', STR(?step1249), '}'), ''))))) - STRLEN(REPLACE(SUBSTR(?targetMotifMatchCigarP00722MF_01687239, 1, (STRLEN(?targetMotifMatchCigarP00722MF_01687239) - STRLEN(REPLACE(?targetMotifMatchCigarP00722MF_01687239, CONCAT('^(?:[a-z]*(?:[A-Z]|-)){', STR(?step1249), '}'), '')))), '[^-]', ''))) AS ?step2250) . BIND(((?step2250 + ?targetMotifMatchRegionMatchBeginPositionMF_01687240) - 1) AS ?thisPositionOn62) . BIND(?thisPositionOn62 AS ?thisPositionOn63) . BIND(?this AS ?pfs1t251) . BIND(URI(CONCAT(STR(?thisSequence), '#position', STR(?thisPositionOn62))) AS ?pfsb59) . BIND(URI(CONCAT(STR(?thisSequence), '#position', STR(?thisPositionOn63))) AS ?pfse60) . FILTER ((SUBSTR(?thisSequenceValue, ?thisPositionOn62, 1) = 'N')) . BIND(URI(CONCAT(STR(?this), '#MF_01687a58')) AS ?annotation58) . BIND(?this AS ?pfs57) . } OPTIONAL { ?this up:sequence ?thisSequence . ?thisSequence rdf:value ?thisSequenceValue . ?templateMotifMatch256 faldo:location ?templateMotifSequenceMatchRegionP00722257 ; edam:is_output_of ?templateMotifSequenceProfileAlignmentOperationP00722259 ; rdf:type edam:data_0869 ; rdf:value ?templateMotifCigarP00722MF_01687252 . ?templateMotifSequenceMatchRegionP00722257 faldo:begin ?templateMotifSequenceMatchBeginP00722258 . ?templateMotifSequenceMatchBeginP00722258 faldo:position ?templateMotifSequenceMatchBeginPositionP00722253 ; faldo:reference isoform:P00722-1 . ?templateMotifSequenceProfileAlignmentOperationP00722259 edam:has_input signature:MF_01687 ; rdf:type edam:operation_0300 . ?targetMotifMatch260 faldo:location ?targetMotifMatchRegionMatch261 ; edam:is_output_of ?targetMotifSequenceAlignmentOperationMF_01687263 ; rdf:type edam:data_0869 ; rdf:value ?targetMotifMatchCigarP00722MF_01687254 . ?targetMotifMatchRegionMatch261 faldo:begin ?targetMotifMatchRegionMatchBeginMF_01687262 . ?targetMotifMatchRegionMatchBeginMF_01687262 faldo:position ?targetMotifMatchRegionMatchBeginPositionMF_01687255 ; faldo:reference ?thisSequence . ?targetMotifSequenceAlignmentOperationMF_01687263 edam:has_input signature:MF_01687 ; rdf:type edam:operation_0300 . BIND(STRLEN(REPLACE(SUBSTR(?templateMotifCigarP00722MF_01687252, 1, (STRLEN(?templateMotifCigarP00722MF_01687252) - STRLEN(REPLACE(?templateMotifCigarP00722MF_01687252, CONCAT('^(?:-*[^-]){', STR(((602 - ?templateMotifSequenceMatchBeginPositionP00722253) + 1)), '}'), '')))), '[a-z]', '')) AS ?step1264) . BIND((STRLEN(SUBSTR(?targetMotifMatchCigarP00722MF_01687254, 1, (STRLEN(?targetMotifMatchCigarP00722MF_01687254) - STRLEN(REPLACE(?targetMotifMatchCigarP00722MF_01687254, CONCAT('^(?:[a-z]*(?:[A-Z]|-)){', STR(?step1264), '}'), ''))))) - STRLEN(REPLACE(SUBSTR(?targetMotifMatchCigarP00722MF_01687254, 1, (STRLEN(?targetMotifMatchCigarP00722MF_01687254) - STRLEN(REPLACE(?targetMotifMatchCigarP00722MF_01687254, CONCAT('^(?:[a-z]*(?:[A-Z]|-)){', STR(?step1264), '}'), '')))), '[^-]', ''))) AS ?step2265) . BIND(((?step2265 + ?targetMotifMatchRegionMatchBeginPositionMF_01687255) - 1) AS ?thisPositionOn69) . BIND(?thisPositionOn69 AS ?thisPositionOn70) . BIND(?this AS ?pfs1t266) . BIND(URI(CONCAT(STR(?thisSequence), '#position', STR(?thisPositionOn69))) AS ?pfsb66) . BIND(URI(CONCAT(STR(?thisSequence), '#position', STR(?thisPositionOn70))) AS ?pfse67) . FILTER ((SUBSTR(?thisSequenceValue, ?thisPositionOn69, 1) = 'F')) . BIND(URI(CONCAT(STR(?this), '#MF_01687a65')) AS ?annotation65) . BIND(?this AS ?pfs64) . } OPTIONAL { ?this up:sequence ?thisSequence . ?thisSequence rdf:value ?thisSequenceValue . ?templateMotifMatch271 faldo:location ?templateMotifSequenceMatchRegionP00722272 ; edam:is_output_of ?templateMotifSequenceProfileAlignmentOperationP00722274 ; rdf:type edam:data_0869 ; rdf:value ?templateMotifCigarP00722MF_01687267 . ?templateMotifSequenceMatchRegionP00722272 faldo:begin ?templateMotifSequenceMatchBeginP00722273 . ?templateMotifSequenceMatchBeginP00722273 faldo:position ?templateMotifSequenceMatchBeginPositionP00722268 ; faldo:reference isoform:P00722-1 . ?templateMotifSequenceProfileAlignmentOperationP00722274 edam:has_input signature:MF_01687 ; rdf:type edam:operation_0300 . ?targetMotifMatch275 faldo:location ?targetMotifMatchRegionMatch276 ; edam:is_output_of ?targetMotifSequenceAlignmentOperationMF_01687278 ; rdf:type edam:data_0869 ; rdf:value ?targetMotifMatchCigarP00722MF_01687269 . ?targetMotifMatchRegionMatch276 faldo:begin ?targetMotifMatchRegionMatchBeginMF_01687277 . ?targetMotifMatchRegionMatchBeginMF_01687277 faldo:position ?targetMotifMatchRegionMatchBeginPositionMF_01687270 ; faldo:reference ?thisSequence . ?targetMotifSequenceAlignmentOperationMF_01687278 edam:has_input signature:MF_01687 ; rdf:type edam:operation_0300 . BIND(STRLEN(REPLACE(SUBSTR(?templateMotifCigarP00722MF_01687267, 1, (STRLEN(?templateMotifCigarP00722MF_01687267) - STRLEN(REPLACE(?templateMotifCigarP00722MF_01687267, CONCAT('^(?:-*[^-]){', STR(((605 - ?templateMotifSequenceMatchBeginPositionP00722268) + 1)), '}'), '')))), '[a-z]', '')) AS ?step1279) . BIND((STRLEN(SUBSTR(?targetMotifMatchCigarP00722MF_01687269, 1, (STRLEN(?targetMotifMatchCigarP00722MF_01687269) - STRLEN(REPLACE(?targetMotifMatchCigarP00722MF_01687269, CONCAT('^(?:[a-z]*(?:[A-Z]|-)){', STR(?step1279), '}'), ''))))) - STRLEN(REPLACE(SUBSTR(?targetMotifMatchCigarP00722MF_01687269, 1, (STRLEN(?targetMotifMatchCigarP00722MF_01687269) - STRLEN(REPLACE(?targetMotifMatchCigarP00722MF_01687269, CONCAT('^(?:[a-z]*(?:[A-Z]|-)){', STR(?step1279), '}'), '')))), '[^-]', ''))) AS ?step2280) . BIND(((?step2280 + ?targetMotifMatchRegionMatchBeginPositionMF_01687270) - 1) AS ?thisPositionOn76) . BIND(?thisPositionOn76 AS ?thisPositionOn77) . BIND(?this AS ?pfs1t281) . BIND(URI(CONCAT(STR(?thisSequence), '#position', STR(?thisPositionOn76))) AS ?pfsb73) . BIND(URI(CONCAT(STR(?thisSequence), '#position', STR(?thisPositionOn77))) AS ?pfse74) . FILTER (REGEX('[DN]', SUBSTR(?thisSequenceValue, ?thisPositionOn76, 1))) . BIND(URI(CONCAT(STR(?this), '#MF_01687a72')) AS ?annotation72) . BIND(?this AS ?pfs71) . } OPTIONAL { ?this up:sequence ?thisSequence . ?thisSequence rdf:value ?thisSequenceValue . ?templateMotifMatch286 faldo:location ?templateMotifSequenceMatchRegionP00722287 ; edam:is_output_of ?templateMotifSequenceProfileAlignmentOperationP00722289 ; rdf:type edam:data_0869 ; rdf:value ?templateMotifCigarP00722MF_01687282 . ?templateMotifSequenceMatchRegionP00722287 faldo:begin ?templateMotifSequenceMatchBeginP00722288 . ?templateMotifSequenceMatchBeginP00722288 faldo:position ?templateMotifSequenceMatchBeginPositionP00722283 ; faldo:reference isoform:P00722-1 . ?templateMotifSequenceProfileAlignmentOperationP00722289 edam:has_input signature:MF_01687 ; rdf:type edam:operation_0300 . ?targetMotifMatch290 faldo:location ?targetMotifMatchRegionMatch291 ; edam:is_output_of ?targetMotifSequenceAlignmentOperationMF_01687293 ; rdf:type edam:data_0869 ; rdf:value ?targetMotifMatchCigarP00722MF_01687284 . ?targetMotifMatchRegionMatch291 faldo:begin ?targetMotifMatchRegionMatchBeginMF_01687292 . ?targetMotifMatchRegionMatchBeginMF_01687292 faldo:position ?targetMotifMatchRegionMatchBeginPositionMF_01687285 ; faldo:reference ?thisSequence . ?targetMotifSequenceAlignmentOperationMF_01687293 edam:has_input signature:MF_01687 ; rdf:type edam:operation_0300 . BIND(STRLEN(REPLACE(SUBSTR(?templateMotifCigarP00722MF_01687282, 1, (STRLEN(?templateMotifCigarP00722MF_01687282) - STRLEN(REPLACE(?templateMotifCigarP00722MF_01687282, CONCAT('^(?:-*[^-]){', STR(((103 - ?templateMotifSequenceMatchBeginPositionP00722283) + 1)), '}'), '')))), '[a-z]', '')) AS ?step1294) . BIND((STRLEN(SUBSTR(?targetMotifMatchCigarP00722MF_01687284, 1, (STRLEN(?targetMotifMatchCigarP00722MF_01687284) - STRLEN(REPLACE(?targetMotifMatchCigarP00722MF_01687284, CONCAT('^(?:[a-z]*(?:[A-Z]|-)){', STR(?step1294), '}'), ''))))) - STRLEN(REPLACE(SUBSTR(?targetMotifMatchCigarP00722MF_01687284, 1, (STRLEN(?targetMotifMatchCigarP00722MF_01687284) - STRLEN(REPLACE(?targetMotifMatchCigarP00722MF_01687284, CONCAT('^(?:[a-z]*(?:[A-Z]|-)){', STR(?step1294), '}'), '')))), '[^-]', ''))) AS ?step2295) . BIND(((?step2295 + ?targetMotifMatchRegionMatchBeginPositionMF_01687285) - 1) AS ?thisPositionOn84) . BIND(?thisPositionOn84 AS ?thisPositionOn85) . BIND(?this AS ?pfs1t296) . BIND(URI(CONCAT(STR(?thisSequence), '#position', STR(?thisPositionOn84))) AS ?pfsb80) . BIND(URI(CONCAT(STR(?thisSequence), '#position', STR(?thisPositionOn85))) AS ?pfse81) . FILTER ((SUBSTR(?thisSequenceValue, ?thisPositionOn84, 1) = 'N')) . BIND(URI(CONCAT(STR(?this), '#MF_01687a79')) AS ?annotation79) . BIND(?this AS ?pfs78) . } OPTIONAL { ?this up:sequence ?thisSequence . ?thisSequence rdf:value ?thisSequenceValue . ?templateMotifMatch301 faldo:location ?templateMotifSequenceMatchRegionP00722302 ; edam:is_output_of ?templateMotifSequenceProfileAlignmentOperationP00722304 ; rdf:type edam:data_0869 ; rdf:value ?templateMotifCigarP00722MF_01687297 . ?templateMotifSequenceMatchRegionP00722302 faldo:begin ?templateMotifSequenceMatchBeginP00722303 . ?templateMotifSequenceMatchBeginP00722303 faldo:position ?templateMotifSequenceMatchBeginPositionP00722298 ; faldo:reference isoform:P00722-1 . ?templateMotifSequenceProfileAlignmentOperationP00722304 edam:has_input signature:MF_01687 ; rdf:type edam:operation_0300 . ?targetMotifMatch305 faldo:location ?targetMotifMatchRegionMatch306 ; edam:is_output_of ?targetMotifSequenceAlignmentOperationMF_01687308 ; rdf:type edam:data_0869 ; rdf:value ?targetMotifMatchCigarP00722MF_01687299 . ?targetMotifMatchRegionMatch306 faldo:begin ?targetMotifMatchRegionMatchBeginMF_01687307 . ?targetMotifMatchRegionMatchBeginMF_01687307 faldo:position ?targetMotifMatchRegionMatchBeginPositionMF_01687300 ; faldo:reference ?thisSequence . ?targetMotifSequenceAlignmentOperationMF_01687308 edam:has_input signature:MF_01687 ; rdf:type edam:operation_0300 . BIND(STRLEN(REPLACE(SUBSTR(?templateMotifCigarP00722MF_01687297, 1, (STRLEN(?templateMotifCigarP00722MF_01687297) - STRLEN(REPLACE(?templateMotifCigarP00722MF_01687297, CONCAT('^(?:-*[^-]){', STR(((202 - ?templateMotifSequenceMatchBeginPositionP00722298) + 1)), '}'), '')))), '[a-z]', '')) AS ?step1309) . BIND((STRLEN(SUBSTR(?targetMotifMatchCigarP00722MF_01687299, 1, (STRLEN(?targetMotifMatchCigarP00722MF_01687299) - STRLEN(REPLACE(?targetMotifMatchCigarP00722MF_01687299, CONCAT('^(?:[a-z]*(?:[A-Z]|-)){', STR(?step1309), '}'), ''))))) - STRLEN(REPLACE(SUBSTR(?targetMotifMatchCigarP00722MF_01687299, 1, (STRLEN(?targetMotifMatchCigarP00722MF_01687299) - STRLEN(REPLACE(?targetMotifMatchCigarP00722MF_01687299, CONCAT('^(?:[a-z]*(?:[A-Z]|-)){', STR(?step1309), '}'), '')))), '[^-]', ''))) AS ?step2310) . BIND(((?step2310 + ?targetMotifMatchRegionMatchBeginPositionMF_01687300) - 1) AS ?thisPositionOn92) . BIND(?thisPositionOn92 AS ?thisPositionOn93) . BIND(?this AS ?pfs1t311) . BIND(URI(CONCAT(STR(?thisSequence), '#position', STR(?thisPositionOn92))) AS ?pfsb88) . BIND(URI(CONCAT(STR(?thisSequence), '#position', STR(?thisPositionOn93))) AS ?pfse89) . FILTER ((SUBSTR(?thisSequenceValue, ?thisPositionOn92, 1) = 'D')) . BIND(URI(CONCAT(STR(?this), '#MF_01687a87')) AS ?annotation87) . BIND(?this AS ?pfs86) . } OPTIONAL { ?this up:sequence ?thisSequence . ?thisSequence rdf:value ?thisSequenceValue . ?templateMotifMatch316 faldo:location ?templateMotifSequenceMatchRegionP00722317 ; edam:is_output_of ?templateMotifSequenceProfileAlignmentOperationP00722319 ; rdf:type edam:data_0869 ; rdf:value ?templateMotifCigarP00722MF_01687312 . ?templateMotifSequenceMatchRegionP00722317 faldo:begin ?templateMotifSequenceMatchBeginP00722318 . ?templateMotifSequenceMatchBeginP00722318 faldo:position ?templateMotifSequenceMatchBeginPositionP00722313 ; faldo:reference isoform:P00722-1 . ?templateMotifSequenceProfileAlignmentOperationP00722319 edam:has_input signature:MF_01687 ; rdf:type edam:operation_0300 . ?targetMotifMatch320 faldo:location ?targetMotifMatchRegionMatch321 ; edam:is_output_of ?targetMotifSequenceAlignmentOperationMF_01687323 ; rdf:type edam:data_0869 ; rdf:value ?targetMotifMatchCigarP00722MF_01687314 . ?targetMotifMatchRegionMatch321 faldo:begin ?targetMotifMatchRegionMatchBeginMF_01687322 . ?targetMotifMatchRegionMatchBeginMF_01687322 faldo:position ?targetMotifMatchRegionMatchBeginPositionMF_01687315 ; faldo:reference ?thisSequence . ?targetMotifSequenceAlignmentOperationMF_01687323 edam:has_input signature:MF_01687 ; rdf:type edam:operation_0300 . BIND(STRLEN(REPLACE(SUBSTR(?templateMotifCigarP00722MF_01687312, 1, (STRLEN(?templateMotifCigarP00722MF_01687312) - STRLEN(REPLACE(?templateMotifCigarP00722MF_01687312, CONCAT('^(?:-*[^-]){', STR(((462 - ?templateMotifSequenceMatchBeginPositionP00722313) + 1)), '}'), '')))), '[a-z]', '')) AS ?step1324) . BIND((STRLEN(SUBSTR(?targetMotifMatchCigarP00722MF_01687314, 1, (STRLEN(?targetMotifMatchCigarP00722MF_01687314) - STRLEN(REPLACE(?targetMotifMatchCigarP00722MF_01687314, CONCAT('^(?:[a-z]*(?:[A-Z]|-)){', STR(?step1324), '}'), ''))))) - STRLEN(REPLACE(SUBSTR(?targetMotifMatchCigarP00722MF_01687314, 1, (STRLEN(?targetMotifMatchCigarP00722MF_01687314) - STRLEN(REPLACE(?targetMotifMatchCigarP00722MF_01687314, CONCAT('^(?:[a-z]*(?:[A-Z]|-)){', STR(?step1324), '}'), '')))), '[^-]', ''))) AS ?step2325) . BIND(((?step2325 + ?targetMotifMatchRegionMatchBeginPositionMF_01687315) - 1) AS ?thisPositionOn100) . BIND(?thisPositionOn100 AS ?thisPositionOn101) . BIND(?this AS ?pfs1t326) . BIND(URI(CONCAT(STR(?thisSequence), '#position', STR(?thisPositionOn100))) AS ?pfsb96) . BIND(URI(CONCAT(STR(?thisSequence), '#position', STR(?thisPositionOn101))) AS ?pfse97) . FILTER ((SUBSTR(?thisSequenceValue, ?thisPositionOn100, 1) = 'E')) . BIND(URI(CONCAT(STR(?this), '#MF_01687a95')) AS ?annotation95) . BIND(?this AS ?pfs94) . } OPTIONAL { ?this up:sequence ?thisSequence . ?thisSequence rdf:value ?thisSequenceValue . ?templateMotifMatch331 faldo:location ?templateMotifSequenceMatchRegionP00722332 ; edam:is_output_of ?templateMotifSequenceProfileAlignmentOperationP00722334 ; rdf:type edam:data_0869 ; rdf:value ?templateMotifCigarP00722MF_01687327 . ?templateMotifSequenceMatchRegionP00722332 faldo:begin ?templateMotifSequenceMatchBeginP00722333 . ?templateMotifSequenceMatchBeginP00722333 faldo:position ?templateMotifSequenceMatchBeginPositionP00722328 ; faldo:reference isoform:P00722-1 . ?templateMotifSequenceProfileAlignmentOperationP00722334 edam:has_input signature:MF_01687 ; rdf:type edam:operation_0300 . ?targetMotifMatch335 faldo:location ?targetMotifMatchRegionMatch336 ; edam:is_output_of ?targetMotifSequenceAlignmentOperationMF_01687338 ; rdf:type edam:data_0869 ; rdf:value ?targetMotifMatchCigarP00722MF_01687329 . ?targetMotifMatchRegionMatch336 faldo:begin ?targetMotifMatchRegionMatchBeginMF_01687337 . ?targetMotifMatchRegionMatchBeginMF_01687337 faldo:position ?targetMotifMatchRegionMatchBeginPositionMF_01687330 ; faldo:reference ?thisSequence . ?targetMotifSequenceAlignmentOperationMF_01687338 edam:has_input signature:MF_01687 ; rdf:type edam:operation_0300 . BIND(STRLEN(REPLACE(SUBSTR(?templateMotifCigarP00722MF_01687327, 1, (STRLEN(?templateMotifCigarP00722MF_01687327) - STRLEN(REPLACE(?templateMotifCigarP00722MF_01687327, CONCAT('^(?:-*[^-]){', STR(((605 - ?templateMotifSequenceMatchBeginPositionP00722328) + 1)), '}'), '')))), '[a-z]', '')) AS ?step1339) . BIND((STRLEN(SUBSTR(?targetMotifMatchCigarP00722MF_01687329, 1, (STRLEN(?targetMotifMatchCigarP00722MF_01687329) - STRLEN(REPLACE(?targetMotifMatchCigarP00722MF_01687329, CONCAT('^(?:[a-z]*(?:[A-Z]|-)){', STR(?step1339), '}'), ''))))) - STRLEN(REPLACE(SUBSTR(?targetMotifMatchCigarP00722MF_01687329, 1, (STRLEN(?targetMotifMatchCigarP00722MF_01687329) - STRLEN(REPLACE(?targetMotifMatchCigarP00722MF_01687329, CONCAT('^(?:[a-z]*(?:[A-Z]|-)){', STR(?step1339), '}'), '')))), '[^-]', ''))) AS ?step2340) . BIND(((?step2340 + ?targetMotifMatchRegionMatchBeginPositionMF_01687330) - 1) AS ?thisPositionOn108) . BIND(?thisPositionOn108 AS ?thisPositionOn109) . BIND(?this AS ?pfs1t341) . BIND(URI(CONCAT(STR(?thisSequence), '#position', STR(?thisPositionOn108))) AS ?pfsb104) . BIND(URI(CONCAT(STR(?thisSequence), '#position', STR(?thisPositionOn109))) AS ?pfse105) . FILTER (REGEX('[DN]', SUBSTR(?thisSequenceValue, ?thisPositionOn108, 1))) . BIND(URI(CONCAT(STR(?this), '#MF_01687a103')) AS ?annotation103) . BIND(?this AS ?pfs102) . } OPTIONAL { ?this up:sequence ?thisSequence . ?thisSequence rdf:value ?thisSequenceValue . ?templateMotifMatch346 faldo:location ?templateMotifSequenceMatchRegionP00722347 ; edam:is_output_of ?templateMotifSequenceProfileAlignmentOperationP00722349 ; rdf:type edam:data_0869 ; rdf:value ?templateMotifCigarP00722MF_01687342 . ?templateMotifSequenceMatchRegionP00722347 faldo:begin ?templateMotifSequenceMatchBeginP00722348 . ?templateMotifSequenceMatchBeginP00722348 faldo:position ?templateMotifSequenceMatchBeginPositionP00722343 ; faldo:reference isoform:P00722-1 . ?templateMotifSequenceProfileAlignmentOperationP00722349 edam:has_input signature:MF_01687 ; rdf:type edam:operation_0300 . ?targetMotifMatch350 faldo:location ?targetMotifMatchRegionMatch351 ; edam:is_output_of ?targetMotifSequenceAlignmentOperationMF_01687353 ; rdf:type edam:data_0869 ; rdf:value ?targetMotifMatchCigarP00722MF_01687344 . ?targetMotifMatchRegionMatch351 faldo:begin ?targetMotifMatchRegionMatchBeginMF_01687352 . ?targetMotifMatchRegionMatchBeginMF_01687352 faldo:position ?targetMotifMatchRegionMatchBeginPositionMF_01687345 ; faldo:reference ?thisSequence . ?targetMotifSequenceAlignmentOperationMF_01687353 edam:has_input signature:MF_01687 ; rdf:type edam:operation_0300 . BIND(STRLEN(REPLACE(SUBSTR(?templateMotifCigarP00722MF_01687342, 1, (STRLEN(?templateMotifCigarP00722MF_01687342) - STRLEN(REPLACE(?templateMotifCigarP00722MF_01687342, CONCAT('^(?:-*[^-]){', STR(((1000 - ?templateMotifSequenceMatchBeginPositionP00722343) + 1)), '}'), '')))), '[a-z]', '')) AS ?step1354) . BIND((STRLEN(SUBSTR(?targetMotifMatchCigarP00722MF_01687344, 1, (STRLEN(?targetMotifMatchCigarP00722MF_01687344) - STRLEN(REPLACE(?targetMotifMatchCigarP00722MF_01687344, CONCAT('^(?:[a-z]*(?:[A-Z]|-)){', STR(?step1354), '}'), ''))))) - STRLEN(REPLACE(SUBSTR(?targetMotifMatchCigarP00722MF_01687344, 1, (STRLEN(?targetMotifMatchCigarP00722MF_01687344) - STRLEN(REPLACE(?targetMotifMatchCigarP00722MF_01687344, CONCAT('^(?:[a-z]*(?:[A-Z]|-)){', STR(?step1354), '}'), '')))), '[^-]', ''))) AS ?step2355) . BIND(((?step2355 + ?targetMotifMatchRegionMatchBeginPositionMF_01687345) - 1) AS ?thisPositionOn116) . BIND(?thisPositionOn116 AS ?thisPositionOn117) . BIND(?this AS ?pfs1t356) . BIND(URI(CONCAT(STR(?thisSequence), '#position', STR(?thisPositionOn116))) AS ?pfsb112) . BIND(URI(CONCAT(STR(?thisSequence), '#position', STR(?thisPositionOn117))) AS ?pfse113) . FILTER ((SUBSTR(?thisSequenceValue, ?thisPositionOn116, 1) = 'W')) . BIND(URI(CONCAT(STR(?this), '#MF_01687a111')) AS ?annotation111) . BIND(?this AS ?pfs110) . } OPTIONAL { ?this up:sequence ?thisSequence . ?thisSequence rdf:value ?thisSequenceValue . ?templateMotifMatch361 faldo:location ?templateMotifSequenceMatchRegionP00722362 ; edam:is_output_of ?templateMotifSequenceProfileAlignmentOperationP00722364 ; rdf:type edam:data_0869 ; rdf:value ?templateMotifCigarP00722MF_01687357 . ?templateMotifSequenceMatchRegionP00722362 faldo:begin ?templateMotifSequenceMatchBeginP00722363 . ?templateMotifSequenceMatchBeginP00722363 faldo:position ?templateMotifSequenceMatchBeginPositionP00722358 ; faldo:reference isoform:P00722-1 . ?templateMotifSequenceProfileAlignmentOperationP00722364 edam:has_input signature:MF_01687 ; rdf:type edam:operation_0300 . ?targetMotifMatch365 faldo:location ?targetMotifMatchRegionMatch366 ; edam:is_output_of ?targetMotifSequenceAlignmentOperationMF_01687368 ; rdf:type edam:data_0869 ; rdf:value ?targetMotifMatchCigarP00722MF_01687359 . ?targetMotifMatchRegionMatch366 faldo:begin ?targetMotifMatchRegionMatchBeginMF_01687367 . ?targetMotifMatchRegionMatchBeginMF_01687367 faldo:position ?targetMotifMatchRegionMatchBeginPositionMF_01687360 ; faldo:reference ?thisSequence . ?targetMotifSequenceAlignmentOperationMF_01687368 edam:has_input signature:MF_01687 ; rdf:type edam:operation_0300 . BIND(STRLEN(REPLACE(SUBSTR(?templateMotifCigarP00722MF_01687357, 1, (STRLEN(?templateMotifCigarP00722MF_01687357) - STRLEN(REPLACE(?templateMotifCigarP00722MF_01687357, CONCAT('^(?:-*[^-]){', STR(((358 - ?templateMotifSequenceMatchBeginPositionP00722358) + 1)), '}'), '')))), '[a-z]', '')) AS ?step1369) . BIND((STRLEN(SUBSTR(?targetMotifMatchCigarP00722MF_01687359, 1, (STRLEN(?targetMotifMatchCigarP00722MF_01687359) - STRLEN(REPLACE(?targetMotifMatchCigarP00722MF_01687359, CONCAT('^(?:[a-z]*(?:[A-Z]|-)){', STR(?step1369), '}'), ''))))) - STRLEN(REPLACE(SUBSTR(?targetMotifMatchCigarP00722MF_01687359, 1, (STRLEN(?targetMotifMatchCigarP00722MF_01687359) - STRLEN(REPLACE(?targetMotifMatchCigarP00722MF_01687359, CONCAT('^(?:[a-z]*(?:[A-Z]|-)){', STR(?step1369), '}'), '')))), '[^-]', ''))) AS ?step2370) . BIND(((?step2370 + ?targetMotifMatchRegionMatchBeginPositionMF_01687360) - 1) AS ?thisPositionOn122) . BIND(?thisPositionOn122 AS ?thisPositionOn123) . BIND(?this AS ?pfs1t371) . BIND(URI(CONCAT(STR(?thisSequence), '#position', STR(?thisPositionOn122))) AS ?pfsb120) . BIND(URI(CONCAT(STR(?thisSequence), '#position', STR(?thisPositionOn123))) AS ?pfse121) . FILTER ((SUBSTR(?thisSequenceValue, ?thisPositionOn122, 1) = 'H')) . BIND(URI(CONCAT(STR(?this), '#MF_01687a119')) AS ?annotation119) . BIND(?this AS ?pfs118) . } OPTIONAL { ?this up:sequence ?thisSequence . ?thisSequence rdf:value ?thisSequenceValue . ?templateMotifMatch376 faldo:location ?templateMotifSequenceMatchRegionP00722377 ; edam:is_output_of ?templateMotifSequenceProfileAlignmentOperationP00722379 ; rdf:type edam:data_0869 ; rdf:value ?templateMotifCigarP00722MF_01687372 . ?templateMotifSequenceMatchRegionP00722377 faldo:begin ?templateMotifSequenceMatchBeginP00722378 . ?templateMotifSequenceMatchBeginP00722378 faldo:position ?templateMotifSequenceMatchBeginPositionP00722373 ; faldo:reference isoform:P00722-1 . ?templateMotifSequenceProfileAlignmentOperationP00722379 edam:has_input signature:MF_01687 ; rdf:type edam:operation_0300 . ?targetMotifMatch380 faldo:location ?targetMotifMatchRegionMatch381 ; edam:is_output_of ?targetMotifSequenceAlignmentOperationMF_01687383 ; rdf:type edam:data_0869 ; rdf:value ?targetMotifMatchCigarP00722MF_01687374 . ?targetMotifMatchRegionMatch381 faldo:begin ?targetMotifMatchRegionMatchBeginMF_01687382 . ?targetMotifMatchRegionMatchBeginMF_01687382 faldo:position ?targetMotifMatchRegionMatchBeginPositionMF_01687375 ; faldo:reference ?thisSequence . ?targetMotifSequenceAlignmentOperationMF_01687383 edam:has_input signature:MF_01687 ; rdf:type edam:operation_0300 . BIND(STRLEN(REPLACE(SUBSTR(?templateMotifCigarP00722MF_01687372, 1, (STRLEN(?templateMotifCigarP00722MF_01687372) - STRLEN(REPLACE(?templateMotifCigarP00722MF_01687372, CONCAT('^(?:-*[^-]){', STR(((392 - ?templateMotifSequenceMatchBeginPositionP00722373) + 1)), '}'), '')))), '[a-z]', '')) AS ?step1384) . BIND((STRLEN(SUBSTR(?targetMotifMatchCigarP00722MF_01687374, 1, (STRLEN(?targetMotifMatchCigarP00722MF_01687374) - STRLEN(REPLACE(?targetMotifMatchCigarP00722MF_01687374, CONCAT('^(?:[a-z]*(?:[A-Z]|-)){', STR(?step1384), '}'), ''))))) - STRLEN(REPLACE(SUBSTR(?targetMotifMatchCigarP00722MF_01687374, 1, (STRLEN(?targetMotifMatchCigarP00722MF_01687374) - STRLEN(REPLACE(?targetMotifMatchCigarP00722MF_01687374, CONCAT('^(?:[a-z]*(?:[A-Z]|-)){', STR(?step1384), '}'), '')))), '[^-]', ''))) AS ?step2385) . BIND(((?step2385 + ?targetMotifMatchRegionMatchBeginPositionMF_01687375) - 1) AS ?thisPositionOn128) . BIND(?thisPositionOn128 AS ?thisPositionOn129) . BIND(?this AS ?pfs1t386) . BIND(URI(CONCAT(STR(?thisSequence), '#position', STR(?thisPositionOn128))) AS ?pfsb126) . BIND(URI(CONCAT(STR(?thisSequence), '#position', STR(?thisPositionOn129))) AS ?pfse127) . FILTER ((SUBSTR(?thisSequenceValue, ?thisPositionOn128, 1) = 'H')) . BIND(URI(CONCAT(STR(?this), '#MF_01687a125')) AS ?annotation125) . BIND(?this AS ?pfs124) . } }