CONSTRUCT { _:631106 up:source unirule:MF_01825 . _:631107 up:source unirule:MF_01825 . _:631108 up:source unirule:MF_01825 . _:631109 up:source unirule:MF_01825 . _:631110 up:source unirule:MF_01825 . _:631111 up:source unirule:MF_01825 . _:631112 up:source unirule:MF_01825 . _:631113 up:source unirule:MF_01825 . _:631114 up:source unirule:MF_01825 . _:631115 up:source unirule:MF_01825 . _:631116 up:source unirule:MF_01825 . _:631117 up:source unirule:MF_01825 . _:631118 up:source unirule:MF_01825 . _:631119 up:source unirule:MF_01825 . _:631120 up:source unirule:MF_01825 . _:631121 up:source unirule:MF_01825 . _:631122 up:source unirule:MF_01825 . _:631123 up:source unirule:MF_01825 . _:631124 up:source unirule:MF_01825 . _:631125 up:source unirule:MF_01825 . _:631126 up:source unirule:MF_01825 . _:631127 up:source unirule:MF_01825 . _:631128 up:source unirule:MF_01825 . _:631129 up:source unirule:MF_01825 . _:631130 up:source unirule:MF_01825 . _:631131 up:source unirule:MF_01825 . _:631132 up:source unirule:MF_01825 . ?this up:annotation ?annotation2 , ?annotation3 , ?annotation5 , ?annotation6 , ?annotation7 , ?annotation9 ; up:classifiedWith GO:0005737 , GO:0008615 , GO:0016491 , keyword:520 , keyword:560 , keyword:664 , keyword:963 ; up:recommendedName ?name0 . ?name0 up:ecName '1.1.1.290' ; up:fullName 'Erythronate-4-phosphate dehydrogenase' ; rdf:type up:Structured_Name . ?gene1 skos:prefLabel 'pdxB' . ?annotation2 a up:Function_Annotation ; rdfs:comment 'Catalyzes the oxidation of erythronate-4-phosphate to 3-hydroxy-2-oxo-4-phosphonooxybutanoate.' . ?annotation3 up:activity ?activity4 ; rdf:type up:Catalytic_Activity_Annotation . ?activity4 up:catalyticActivity <http://rdf.rhea-db.org/18829>; up:enzymeClass <http://purl.uniprot.org/enzyme/1.1.1.290>. ?annotation5 a up:Pathway_Annotation ; rdfs:comment "Cofactor biosynthesis; pyridoxine 5'-phosphate biosynthesis; pyridoxine 5'-phosphate from D-erythrose 4-phosphate: step 2/5." . ?annotation6 a up:Subunit_Annotation ; rdfs:comment 'Homodimer.' . ?annotation7 a up:Subcellular_Location_Annotation . ?annotation7li8 up:cellularComponent <http://purl.uniprot.org/locations/null>. ?annotation9 a up:Similarity_Annotation ; rdfs:comment 'Belongs to the D-isomer specific 2-hydroxyacid dehydrogenase family. PdxB subfamily.' . ?pfs10 up:annotation ?annotation11 . ?annotation11 faldo:begin ?pfsb12 ; faldo:end ?pfse13 ; up:ligand ?ligand14 ; rdf:type up:Binding_Site_Annotation . ?pfsb12 faldo:position ?thisPositionOn15 ; rdf:type faldo:ExactPosition . ?pfse13 faldo:position ?thisPositionOn16 ; rdf:type faldo:ExactPosition . ?ligand14 rdfs:subClassOf chebi:57540 . ?pfs17 up:annotation ?annotation18 . ?annotation18 faldo:begin ?pfsb19 ; faldo:end ?pfse20 ; up:ligand ?ligand21 ; rdf:type up:Binding_Site_Annotation . ?pfsb19 faldo:position ?thisPositionOn22 ; rdf:type faldo:ExactPosition . ?pfse20 faldo:position ?thisPositionOn23 ; rdf:type faldo:ExactPosition . ?ligand21 rdfs:subClassOf chebi:57540 . ?pfs24 up:annotation ?annotation25 . ?annotation25 faldo:begin ?pfsb26 ; faldo:end ?pfse27 ; rdf:type up:Active_Site_Annotation . ?pfsb26 faldo:position ?thisPositionOn28 ; rdf:type faldo:ExactPosition . ?pfse27 faldo:position ?thisPositionOn29 ; rdf:type faldo:ExactPosition . ?pfs30 up:annotation ?annotation31 . ?annotation31 faldo:begin ?pfsb32 ; faldo:end ?pfse33 ; rdf:type up:Active_Site_Annotation . ?pfsb32 faldo:position ?thisPositionOn34 ; rdf:type faldo:ExactPosition . ?pfse33 faldo:position ?thisPositionOn35 ; rdf:type faldo:ExactPosition . ?pfs36 up:annotation ?annotation37 . ?annotation37 faldo:begin ?pfsb38 ; faldo:end ?pfse39 ; rdf:type up:Active_Site_Annotation ; rdfs:comment 'Proton donor' . ?pfsb38 faldo:position ?thisPositionOn40 ; rdf:type faldo:ExactPosition . ?pfse39 faldo:position ?thisPositionOn41 ; rdf:type faldo:ExactPosition . ?pfs42 up:annotation ?annotation43 . ?annotation43 faldo:begin ?pfsb44 ; faldo:end ?pfse45 ; up:ligand ?ligand46 ; rdf:type up:Binding_Site_Annotation . ?pfsb44 faldo:position ?thisPositionOn48 ; rdf:type faldo:ExactPosition . ?pfse45 faldo:position ?thisPositionOn49 ; rdf:type faldo:ExactPosition . ?ligand46 rdfs:subClassOf ?molecule47 . ?molecule47 rdfs:label 'substrate' . ?pfs50 up:annotation ?annotation51 . ?annotation51 faldo:begin ?pfsb52 ; faldo:end ?pfse53 ; up:ligand ?ligand54 ; rdf:type up:Binding_Site_Annotation . ?pfsb52 faldo:position ?thisPositionOn56 ; rdf:type faldo:ExactPosition . ?pfse53 faldo:position ?thisPositionOn57 ; rdf:type faldo:ExactPosition . ?ligand54 rdfs:subClassOf ?molecule55 . ?molecule55 rdfs:label 'substrate' . ?pfs58 up:annotation ?annotation59 . ?annotation59 faldo:begin ?pfsb60 ; faldo:end ?pfse61 ; up:ligand ?ligand62 ; rdf:type up:Binding_Site_Annotation . ?pfsb60 faldo:position ?thisPositionOn63 ; rdf:type faldo:ExactPosition . ?pfse61 faldo:position ?thisPositionOn64 ; rdf:type faldo:ExactPosition . ?ligand62 rdfs:subClassOf chebi:57540 . ?pfs65 up:annotation ?annotation66 . ?annotation66 faldo:begin ?pfsb67 ; faldo:end ?pfse68 ; up:ligand ?ligand69 ; rdf:type up:Binding_Site_Annotation . ?pfsb67 faldo:position ?thisPositionOn70 ; rdf:type faldo:ExactPosition . ?pfse68 faldo:position ?thisPositionOn71 ; rdf:type faldo:ExactPosition . ?ligand69 rdfs:subClassOf chebi:57540 . ?pfs72 up:annotation ?annotation73 . ?annotation73 faldo:begin ?pfsb74 ; faldo:end ?pfse75 ; up:ligand ?ligand76 ; rdf:type up:Binding_Site_Annotation . ?pfsb74 faldo:position ?thisPositionOn77 ; rdf:type faldo:ExactPosition . ?pfse75 faldo:position ?thisPositionOn78 ; rdf:type faldo:ExactPosition . ?ligand76 rdfs:subClassOf chebi:57540 . ?pfs79 up:annotation ?annotation80 . ?annotation80 faldo:begin ?pfsb81 ; faldo:end ?pfse82 ; up:ligand ?ligand83 ; rdf:type up:Binding_Site_Annotation . ?pfsb81 faldo:position ?thisPositionOn84 ; rdf:type faldo:ExactPosition . ?pfse82 faldo:position ?thisPositionOn85 ; rdf:type faldo:ExactPosition . ?ligand83 rdfs:subClassOf chebi:57540 . ?pfs86 up:annotation ?annotation87 . ?annotation87 faldo:begin ?pfsb88 ; faldo:end ?pfse89 ; up:ligand ?ligand90 ; rdf:type up:Binding_Site_Annotation . ?pfsb88 faldo:position ?thisPositionOn92 ; rdf:type faldo:ExactPosition . ?pfse89 faldo:position ?thisPositionOn93 ; rdf:type faldo:ExactPosition . ?ligand90 rdfs:subClassOf ?molecule91 . ?molecule91 rdfs:label 'substrate' . _:631133 a rdf:Statement ; up:attribution _:631106 ; rdf:subject ?this ; rdf:predicate up:recommendedName ; rdf:object ?name0 . _:631134 a rdf:Statement ; up:attribution _:631107 ; rdf:subject ?gene1 ; rdf:predicate up:encodedBy ; rdf:object ?gene1 . _:631135 a rdf:Statement ; up:attribution _:631108 ; rdf:subject ?this ; rdf:predicate up:annotation ; rdf:object ?annotation2 . _:631136 a rdf:Statement ; up:attribution _:631109 ; rdf:subject ?this ; rdf:predicate up:annotation ; rdf:object ?annotation3 . _:631137 a rdf:Statement ; up:attribution _:631110 ; rdf:subject ?this ; rdf:predicate up:annotation ; rdf:object ?annotation5 . _:631138 a rdf:Statement ; up:attribution _:631111 ; rdf:subject ?this ; rdf:predicate up:annotation ; rdf:object ?annotation6 . _:631139 a rdf:Statement ; up:attribution _:631112 ; rdf:subject ?this ; rdf:predicate up:annotation ; rdf:object ?annotation7 . _:631140 a rdf:Statement ; up:attribution _:631113 ; rdf:subject ?this ; rdf:predicate up:annotation ; rdf:object ?annotation9 . _:631141 a rdf:Statement ; up:attribution _:631114 ; rdf:subject ?this ; rdf:predicate up:classifiedWith ; rdf:object keyword:963 . _:631142 a rdf:Statement ; up:attribution _:631115 ; rdf:subject ?this ; rdf:predicate up:classifiedWith ; rdf:object keyword:520 . _:631143 a rdf:Statement ; up:attribution _:631116 ; rdf:subject ?this ; rdf:predicate up:classifiedWith ; rdf:object keyword:560 . _:631144 a rdf:Statement ; up:attribution _:631117 ; rdf:subject ?this ; rdf:predicate up:classifiedWith ; rdf:object keyword:664 . _:631145 a rdf:Statement ; up:attribution _:631118 ; rdf:subject ?this ; rdf:predicate up:classifiedWith ; rdf:object GO:0016491 . _:631146 a rdf:Statement ; up:attribution _:631119 ; rdf:subject ?this ; rdf:predicate up:classifiedWith ; rdf:object GO:0008615 . _:631147 a rdf:Statement ; up:attribution _:631120 ; rdf:subject ?this ; rdf:predicate up:classifiedWith ; rdf:object GO:0005737 . _:631148 a rdf:Statement ; up:source unirule:MF_01825 ; rdf:subject ?pfs10 ; rdf:predicate up:annotation ; rdf:object ?annotation11 . _:631149 a rdf:Statement ; up:attribution _:631121 ; rdf:subject ?pfs10 ; rdf:predicate up:annotation ; rdf:object ?annotation11 . _:631150 a rdf:Statement ; up:source unirule:MF_01825 ; rdf:subject ?pfs17 ; rdf:predicate up:annotation ; rdf:object ?annotation18 . _:631151 a rdf:Statement ; up:attribution _:631122 ; rdf:subject ?pfs17 ; rdf:predicate up:annotation ; rdf:object ?annotation18 . _:631152 a rdf:Statement ; up:source unirule:MF_01825 ; rdf:subject ?pfs24 ; rdf:predicate up:annotation ; rdf:object ?annotation25 . _:631153 a rdf:Statement ; up:attribution _:631123 ; rdf:subject ?pfs24 ; rdf:predicate up:annotation ; rdf:object ?annotation25 . _:631154 a rdf:Statement ; up:source unirule:MF_01825 ; rdf:subject ?pfs30 ; rdf:predicate up:annotation ; rdf:object ?annotation31 . _:631155 a rdf:Statement ; up:attribution _:631124 ; rdf:subject ?pfs30 ; rdf:predicate up:annotation ; rdf:object ?annotation31 . _:631156 a rdf:Statement ; up:source unirule:MF_01825 ; rdf:subject ?pfs36 ; rdf:predicate up:annotation ; rdf:object ?annotation37 . _:631157 a rdf:Statement ; up:attribution _:631125 ; rdf:subject ?pfs36 ; rdf:predicate up:annotation ; rdf:object ?annotation37 . _:631158 a rdf:Statement ; up:source unirule:MF_01825 ; rdf:subject ?pfs42 ; rdf:predicate up:annotation ; rdf:object ?annotation43 . _:631159 a rdf:Statement ; up:attribution _:631126 ; rdf:subject ?pfs42 ; rdf:predicate up:annotation ; rdf:object ?annotation43 . _:631160 a rdf:Statement ; up:source unirule:MF_01825 ; rdf:subject ?pfs50 ; rdf:predicate up:annotation ; rdf:object ?annotation51 . _:631161 a rdf:Statement ; up:attribution _:631127 ; rdf:subject ?pfs50 ; rdf:predicate up:annotation ; rdf:object ?annotation51 . _:631162 a rdf:Statement ; up:source unirule:MF_01825 ; rdf:subject ?pfs58 ; rdf:predicate up:annotation ; rdf:object ?annotation59 . _:631163 a rdf:Statement ; up:attribution _:631128 ; rdf:subject ?pfs58 ; rdf:predicate up:annotation ; rdf:object ?annotation59 . _:631164 a rdf:Statement ; up:source unirule:MF_01825 ; rdf:subject ?pfs65 ; rdf:predicate up:annotation ; rdf:object ?annotation66 . _:631165 a rdf:Statement ; up:attribution _:631129 ; rdf:subject ?pfs65 ; rdf:predicate up:annotation ; rdf:object ?annotation66 . _:631166 a rdf:Statement ; up:source unirule:MF_01825 ; rdf:subject ?pfs72 ; rdf:predicate up:annotation ; rdf:object ?annotation73 . _:631167 a rdf:Statement ; up:attribution _:631130 ; rdf:subject ?pfs72 ; rdf:predicate up:annotation ; rdf:object ?annotation73 . _:631168 a rdf:Statement ; up:source unirule:MF_01825 ; rdf:subject ?pfs79 ; rdf:predicate up:annotation ; rdf:object ?annotation80 . _:631169 a rdf:Statement ; up:attribution _:631131 ; rdf:subject ?pfs79 ; rdf:predicate up:annotation ; rdf:object ?annotation80 . _:631170 a rdf:Statement ; up:source unirule:MF_01825 ; rdf:subject ?pfs86 ; rdf:predicate up:annotation ; rdf:object ?annotation87 . _:631171 a rdf:Statement ; up:attribution _:631132 ; rdf:subject ?pfs86 ; rdf:predicate up:annotation ; rdf:object ?annotation87 . } WHERE { #baseURI: http://purl.uniprot.org/unirule/MF_01825 #Rule MF_01825 Created by:sylpoux on:2004-03-19 Modified by:ecastro on:2022-11-19 VALUES ?supertaxon94 {taxon:976 taxon:1236} ?this up:organism ?thisOrganism ; rdfs:seeAlso signature:MF_01825 . ?thisOrganism rdfs:subClassOf+ ?supertaxon94 . BIND(URI(CONCAT(STR(?this), '#MF_01825a0')) AS ?name0) . BIND(URI(CONCAT(STR(?this), '#MF_01825a2')) AS ?annotation2) . BIND(URI(CONCAT(STR(?this), '#MF_01825a3')) AS ?annotation3) . BIND(URI(CONCAT(STR(?this), '#MF_01825a5')) AS ?annotation5) . BIND(URI(CONCAT(STR(?this), '#MF_01825a6')) AS ?annotation6) . BIND(URI(CONCAT(STR(?this), '#MF_01825a7')) AS ?annotation7) . BIND(URI(CONCAT(STR(?this), '#MF_01825a9')) AS ?annotation9) . OPTIONAL { ?this up:sequence ?thisSequence . ?thisSequence rdf:value ?thisSequenceValue . ?templateMotifMatch99 faldo:location ?templateMotifSequenceMatchRegionQ9I3W9100 ; edam:is_output_of ?templateMotifSequenceProfileAlignmentOperationQ9I3W9102 ; rdf:type edam:data_0869 ; rdf:value ?templateMotifCigarQ9I3W9MF_0182595 . ?templateMotifSequenceMatchRegionQ9I3W9100 faldo:begin ?templateMotifSequenceMatchBeginQ9I3W9101 . ?templateMotifSequenceMatchBeginQ9I3W9101 faldo:position ?templateMotifSequenceMatchBeginPositionQ9I3W996 ; faldo:reference isoform:Q9I3W9-1 . ?templateMotifSequenceProfileAlignmentOperationQ9I3W9102 edam:has_input signature:MF_01825 ; rdf:type edam:operation_0300 . ?targetMotifMatch103 faldo:location ?targetMotifMatchRegionMatch104 ; edam:is_output_of ?targetMotifSequenceAlignmentOperationMF_01825106 ; rdf:type edam:data_0869 ; rdf:value ?targetMotifMatchCigarQ9I3W9MF_0182597 . ?targetMotifMatchRegionMatch104 faldo:begin ?targetMotifMatchRegionMatchBeginMF_01825105 . ?targetMotifMatchRegionMatchBeginMF_01825105 faldo:position ?targetMotifMatchRegionMatchBeginPositionMF_0182598 ; faldo:reference ?thisSequence . ?targetMotifSequenceAlignmentOperationMF_01825106 edam:has_input signature:MF_01825 ; rdf:type edam:operation_0300 . BIND(STRLEN(REPLACE(SUBSTR(?templateMotifCigarQ9I3W9MF_0182595, 1, (STRLEN(?templateMotifCigarQ9I3W9MF_0182595) - STRLEN(REPLACE(?templateMotifCigarQ9I3W9MF_0182595, CONCAT('^(?:-*[^-]){', STR(((126 - ?templateMotifSequenceMatchBeginPositionQ9I3W996) + 1)), '}'), '')))), '[a-z]', '')) AS ?step1107) . BIND((STRLEN(SUBSTR(?targetMotifMatchCigarQ9I3W9MF_0182597, 1, (STRLEN(?targetMotifMatchCigarQ9I3W9MF_0182597) - STRLEN(REPLACE(?targetMotifMatchCigarQ9I3W9MF_0182597, CONCAT('^(?:[a-z]*(?:[A-Z]|-)){', STR(?step1107), '}'), ''))))) - STRLEN(REPLACE(SUBSTR(?targetMotifMatchCigarQ9I3W9MF_0182597, 1, (STRLEN(?targetMotifMatchCigarQ9I3W9MF_0182597) - STRLEN(REPLACE(?targetMotifMatchCigarQ9I3W9MF_0182597, CONCAT('^(?:[a-z]*(?:[A-Z]|-)){', STR(?step1107), '}'), '')))), '[^-]', ''))) AS ?step2108) . BIND(((?step2108 + ?targetMotifMatchRegionMatchBeginPositionMF_0182598) - 1) AS ?thisPositionOn15) . BIND(STRLEN(REPLACE(SUBSTR(?templateMotifCigarQ9I3W9MF_0182595, 1, (STRLEN(?templateMotifCigarQ9I3W9MF_0182595) - STRLEN(REPLACE(?templateMotifCigarQ9I3W9MF_0182595, CONCAT('^(?:-*[^-]){', STR(((127 - ?templateMotifSequenceMatchBeginPositionQ9I3W996) + 1)), '}'), '')))), '[a-z]', '')) AS ?step1109) . BIND((STRLEN(SUBSTR(?targetMotifMatchCigarQ9I3W9MF_0182597, 1, (STRLEN(?targetMotifMatchCigarQ9I3W9MF_0182597) - STRLEN(REPLACE(?targetMotifMatchCigarQ9I3W9MF_0182597, CONCAT('^(?:[a-z]*(?:[A-Z]|-)){', STR(?step1109), '}'), ''))))) - STRLEN(REPLACE(SUBSTR(?targetMotifMatchCigarQ9I3W9MF_0182597, 1, (STRLEN(?targetMotifMatchCigarQ9I3W9MF_0182597) - STRLEN(REPLACE(?targetMotifMatchCigarQ9I3W9MF_0182597, CONCAT('^(?:[a-z]*(?:[A-Z]|-)){', STR(?step1109), '}'), '')))), '[^-]', ''))) AS ?step2110) . BIND(((?step2110 + ?targetMotifMatchRegionMatchBeginPositionMF_0182598) - 1) AS ?thisPositionOn16) . BIND(?this AS ?pfs1t111) . BIND(URI(CONCAT(STR(?thisSequence), '#position', STR(?thisPositionOn15))) AS ?pfsb12) . BIND(URI(CONCAT(STR(?thisSequence), '#position', STR(?thisPositionOn16))) AS ?pfse13) . FILTER ((SUBSTR(?thisSequenceValue, ?thisPositionOn15, (?thisPositionOn16 - ?thisPositionOn15)) = 'QV')) . BIND(URI(CONCAT(STR(?this), '#MF_01825a11')) AS ?annotation11) . BIND(?this AS ?pfs10) . } OPTIONAL { ?this up:sequence ?thisSequence . ?thisSequence rdf:value ?thisSequenceValue . ?templateMotifMatch116 faldo:location ?templateMotifSequenceMatchRegionQ9I3W9117 ; edam:is_output_of ?templateMotifSequenceProfileAlignmentOperationQ9I3W9119 ; rdf:type edam:data_0869 ; rdf:value ?templateMotifCigarQ9I3W9MF_01825112 . ?templateMotifSequenceMatchRegionQ9I3W9117 faldo:begin ?templateMotifSequenceMatchBeginQ9I3W9118 . ?templateMotifSequenceMatchBeginQ9I3W9118 faldo:position ?templateMotifSequenceMatchBeginPositionQ9I3W9113 ; faldo:reference isoform:Q9I3W9-1 . ?templateMotifSequenceProfileAlignmentOperationQ9I3W9119 edam:has_input signature:MF_01825 ; rdf:type edam:operation_0300 . ?targetMotifMatch120 faldo:location ?targetMotifMatchRegionMatch121 ; edam:is_output_of ?targetMotifSequenceAlignmentOperationMF_01825123 ; rdf:type edam:data_0869 ; rdf:value ?targetMotifMatchCigarQ9I3W9MF_01825114 . ?targetMotifMatchRegionMatch121 faldo:begin ?targetMotifMatchRegionMatchBeginMF_01825122 . ?targetMotifMatchRegionMatchBeginMF_01825122 faldo:position ?targetMotifMatchRegionMatchBeginPositionMF_01825115 ; faldo:reference ?thisSequence . ?targetMotifSequenceAlignmentOperationMF_01825123 edam:has_input signature:MF_01825 ; rdf:type edam:operation_0300 . BIND(STRLEN(REPLACE(SUBSTR(?templateMotifCigarQ9I3W9MF_01825112, 1, (STRLEN(?templateMotifCigarQ9I3W9MF_01825112) - STRLEN(REPLACE(?templateMotifCigarQ9I3W9MF_01825112, CONCAT('^(?:-*[^-]){', STR(((206 - ?templateMotifSequenceMatchBeginPositionQ9I3W9113) + 1)), '}'), '')))), '[a-z]', '')) AS ?step1124) . BIND((STRLEN(SUBSTR(?targetMotifMatchCigarQ9I3W9MF_01825114, 1, (STRLEN(?targetMotifMatchCigarQ9I3W9MF_01825114) - STRLEN(REPLACE(?targetMotifMatchCigarQ9I3W9MF_01825114, CONCAT('^(?:[a-z]*(?:[A-Z]|-)){', STR(?step1124), '}'), ''))))) - STRLEN(REPLACE(SUBSTR(?targetMotifMatchCigarQ9I3W9MF_01825114, 1, (STRLEN(?targetMotifMatchCigarQ9I3W9MF_01825114) - STRLEN(REPLACE(?targetMotifMatchCigarQ9I3W9MF_01825114, CONCAT('^(?:[a-z]*(?:[A-Z]|-)){', STR(?step1124), '}'), '')))), '[^-]', ''))) AS ?step2125) . BIND(((?step2125 + ?targetMotifMatchRegionMatchBeginPositionMF_01825115) - 1) AS ?thisPositionOn22) . BIND(STRLEN(REPLACE(SUBSTR(?templateMotifCigarQ9I3W9MF_01825112, 1, (STRLEN(?templateMotifCigarQ9I3W9MF_01825112) - STRLEN(REPLACE(?templateMotifCigarQ9I3W9MF_01825112, CONCAT('^(?:-*[^-]){', STR(((208 - ?templateMotifSequenceMatchBeginPositionQ9I3W9113) + 1)), '}'), '')))), '[a-z]', '')) AS ?step1126) . BIND((STRLEN(SUBSTR(?targetMotifMatchCigarQ9I3W9MF_01825114, 1, (STRLEN(?targetMotifMatchCigarQ9I3W9MF_01825114) - STRLEN(REPLACE(?targetMotifMatchCigarQ9I3W9MF_01825114, CONCAT('^(?:[a-z]*(?:[A-Z]|-)){', STR(?step1126), '}'), ''))))) - STRLEN(REPLACE(SUBSTR(?targetMotifMatchCigarQ9I3W9MF_01825114, 1, (STRLEN(?targetMotifMatchCigarQ9I3W9MF_01825114) - STRLEN(REPLACE(?targetMotifMatchCigarQ9I3W9MF_01825114, CONCAT('^(?:[a-z]*(?:[A-Z]|-)){', STR(?step1126), '}'), '')))), '[^-]', ''))) AS ?step2127) . BIND(((?step2127 + ?targetMotifMatchRegionMatchBeginPositionMF_01825115) - 1) AS ?thisPositionOn23) . BIND(?this AS ?pfs1t128) . BIND(URI(CONCAT(STR(?thisSequence), '#position', STR(?thisPositionOn22))) AS ?pfsb19) . BIND(URI(CONCAT(STR(?thisSequence), '#position', STR(?thisPositionOn23))) AS ?pfse20) . FILTER ((SUBSTR(?thisSequenceValue, ?thisPositionOn22, (?thisPositionOn23 - ?thisPositionOn22)) = 'ASR')) . BIND(URI(CONCAT(STR(?this), '#MF_01825a18')) AS ?annotation18) . BIND(?this AS ?pfs17) . } OPTIONAL { ?this up:sequence ?thisSequence . ?thisSequence rdf:value ?thisSequenceValue . ?templateMotifMatch133 faldo:location ?templateMotifSequenceMatchRegionQ9I3W9134 ; edam:is_output_of ?templateMotifSequenceProfileAlignmentOperationQ9I3W9136 ; rdf:type edam:data_0869 ; rdf:value ?templateMotifCigarQ9I3W9MF_01825129 . ?templateMotifSequenceMatchRegionQ9I3W9134 faldo:begin ?templateMotifSequenceMatchBeginQ9I3W9135 . ?templateMotifSequenceMatchBeginQ9I3W9135 faldo:position ?templateMotifSequenceMatchBeginPositionQ9I3W9130 ; faldo:reference isoform:Q9I3W9-1 . ?templateMotifSequenceProfileAlignmentOperationQ9I3W9136 edam:has_input signature:MF_01825 ; rdf:type edam:operation_0300 . ?targetMotifMatch137 faldo:location ?targetMotifMatchRegionMatch138 ; edam:is_output_of ?targetMotifSequenceAlignmentOperationMF_01825140 ; rdf:type edam:data_0869 ; rdf:value ?targetMotifMatchCigarQ9I3W9MF_01825131 . ?targetMotifMatchRegionMatch138 faldo:begin ?targetMotifMatchRegionMatchBeginMF_01825139 . ?targetMotifMatchRegionMatchBeginMF_01825139 faldo:position ?targetMotifMatchRegionMatchBeginPositionMF_01825132 ; faldo:reference ?thisSequence . ?targetMotifSequenceAlignmentOperationMF_01825140 edam:has_input signature:MF_01825 ; rdf:type edam:operation_0300 . BIND(STRLEN(REPLACE(SUBSTR(?templateMotifCigarQ9I3W9MF_01825129, 1, (STRLEN(?templateMotifCigarQ9I3W9MF_01825129) - STRLEN(REPLACE(?templateMotifCigarQ9I3W9MF_01825129, CONCAT('^(?:-*[^-]){', STR(((208 - ?templateMotifSequenceMatchBeginPositionQ9I3W9130) + 1)), '}'), '')))), '[a-z]', '')) AS ?step1141) . BIND((STRLEN(SUBSTR(?targetMotifMatchCigarQ9I3W9MF_01825131, 1, (STRLEN(?targetMotifMatchCigarQ9I3W9MF_01825131) - STRLEN(REPLACE(?targetMotifMatchCigarQ9I3W9MF_01825131, CONCAT('^(?:[a-z]*(?:[A-Z]|-)){', STR(?step1141), '}'), ''))))) - STRLEN(REPLACE(SUBSTR(?targetMotifMatchCigarQ9I3W9MF_01825131, 1, (STRLEN(?targetMotifMatchCigarQ9I3W9MF_01825131) - STRLEN(REPLACE(?targetMotifMatchCigarQ9I3W9MF_01825131, CONCAT('^(?:[a-z]*(?:[A-Z]|-)){', STR(?step1141), '}'), '')))), '[^-]', ''))) AS ?step2142) . BIND(((?step2142 + ?targetMotifMatchRegionMatchBeginPositionMF_01825132) - 1) AS ?thisPositionOn28) . BIND(?thisPositionOn28 AS ?thisPositionOn29) . BIND(?this AS ?pfs1t143) . BIND(URI(CONCAT(STR(?thisSequence), '#position', STR(?thisPositionOn28))) AS ?pfsb26) . BIND(URI(CONCAT(STR(?thisSequence), '#position', STR(?thisPositionOn29))) AS ?pfse27) . FILTER ((SUBSTR(?thisSequenceValue, ?thisPositionOn28, 1) = 'R')) . BIND(URI(CONCAT(STR(?this), '#MF_01825a25')) AS ?annotation25) . BIND(?this AS ?pfs24) . } OPTIONAL { ?this up:sequence ?thisSequence . ?thisSequence rdf:value ?thisSequenceValue . ?templateMotifMatch148 faldo:location ?templateMotifSequenceMatchRegionQ9I3W9149 ; edam:is_output_of ?templateMotifSequenceProfileAlignmentOperationQ9I3W9151 ; rdf:type edam:data_0869 ; rdf:value ?templateMotifCigarQ9I3W9MF_01825144 . ?templateMotifSequenceMatchRegionQ9I3W9149 faldo:begin ?templateMotifSequenceMatchBeginQ9I3W9150 . ?templateMotifSequenceMatchBeginQ9I3W9150 faldo:position ?templateMotifSequenceMatchBeginPositionQ9I3W9145 ; faldo:reference isoform:Q9I3W9-1 . ?templateMotifSequenceProfileAlignmentOperationQ9I3W9151 edam:has_input signature:MF_01825 ; rdf:type edam:operation_0300 . ?targetMotifMatch152 faldo:location ?targetMotifMatchRegionMatch153 ; edam:is_output_of ?targetMotifSequenceAlignmentOperationMF_01825155 ; rdf:type edam:data_0869 ; rdf:value ?targetMotifMatchCigarQ9I3W9MF_01825146 . ?targetMotifMatchRegionMatch153 faldo:begin ?targetMotifMatchRegionMatchBeginMF_01825154 . ?targetMotifMatchRegionMatchBeginMF_01825154 faldo:position ?targetMotifMatchRegionMatchBeginPositionMF_01825147 ; faldo:reference ?thisSequence . ?targetMotifSequenceAlignmentOperationMF_01825155 edam:has_input signature:MF_01825 ; rdf:type edam:operation_0300 . BIND(STRLEN(REPLACE(SUBSTR(?templateMotifCigarQ9I3W9MF_01825144, 1, (STRLEN(?templateMotifCigarQ9I3W9MF_01825144) - STRLEN(REPLACE(?templateMotifCigarQ9I3W9MF_01825144, CONCAT('^(?:-*[^-]){', STR(((237 - ?templateMotifSequenceMatchBeginPositionQ9I3W9145) + 1)), '}'), '')))), '[a-z]', '')) AS ?step1156) . BIND((STRLEN(SUBSTR(?targetMotifMatchCigarQ9I3W9MF_01825146, 1, (STRLEN(?targetMotifMatchCigarQ9I3W9MF_01825146) - STRLEN(REPLACE(?targetMotifMatchCigarQ9I3W9MF_01825146, CONCAT('^(?:[a-z]*(?:[A-Z]|-)){', STR(?step1156), '}'), ''))))) - STRLEN(REPLACE(SUBSTR(?targetMotifMatchCigarQ9I3W9MF_01825146, 1, (STRLEN(?targetMotifMatchCigarQ9I3W9MF_01825146) - STRLEN(REPLACE(?targetMotifMatchCigarQ9I3W9MF_01825146, CONCAT('^(?:[a-z]*(?:[A-Z]|-)){', STR(?step1156), '}'), '')))), '[^-]', ''))) AS ?step2157) . BIND(((?step2157 + ?targetMotifMatchRegionMatchBeginPositionMF_01825147) - 1) AS ?thisPositionOn34) . BIND(?thisPositionOn34 AS ?thisPositionOn35) . BIND(?this AS ?pfs1t158) . BIND(URI(CONCAT(STR(?thisSequence), '#position', STR(?thisPositionOn34))) AS ?pfsb32) . BIND(URI(CONCAT(STR(?thisSequence), '#position', STR(?thisPositionOn35))) AS ?pfse33) . FILTER ((SUBSTR(?thisSequenceValue, ?thisPositionOn34, 1) = 'E')) . BIND(URI(CONCAT(STR(?this), '#MF_01825a31')) AS ?annotation31) . BIND(?this AS ?pfs30) . } OPTIONAL { ?this up:sequence ?thisSequence . ?thisSequence rdf:value ?thisSequenceValue . ?templateMotifMatch163 faldo:location ?templateMotifSequenceMatchRegionQ9I3W9164 ; edam:is_output_of ?templateMotifSequenceProfileAlignmentOperationQ9I3W9166 ; rdf:type edam:data_0869 ; rdf:value ?templateMotifCigarQ9I3W9MF_01825159 . ?templateMotifSequenceMatchRegionQ9I3W9164 faldo:begin ?templateMotifSequenceMatchBeginQ9I3W9165 . ?templateMotifSequenceMatchBeginQ9I3W9165 faldo:position ?templateMotifSequenceMatchBeginPositionQ9I3W9160 ; faldo:reference isoform:Q9I3W9-1 . ?templateMotifSequenceProfileAlignmentOperationQ9I3W9166 edam:has_input signature:MF_01825 ; rdf:type edam:operation_0300 . ?targetMotifMatch167 faldo:location ?targetMotifMatchRegionMatch168 ; edam:is_output_of ?targetMotifSequenceAlignmentOperationMF_01825170 ; rdf:type edam:data_0869 ; rdf:value ?targetMotifMatchCigarQ9I3W9MF_01825161 . ?targetMotifMatchRegionMatch168 faldo:begin ?targetMotifMatchRegionMatchBeginMF_01825169 . ?targetMotifMatchRegionMatchBeginMF_01825169 faldo:position ?targetMotifMatchRegionMatchBeginPositionMF_01825162 ; faldo:reference ?thisSequence . ?targetMotifSequenceAlignmentOperationMF_01825170 edam:has_input signature:MF_01825 ; rdf:type edam:operation_0300 . BIND(STRLEN(REPLACE(SUBSTR(?templateMotifCigarQ9I3W9MF_01825159, 1, (STRLEN(?templateMotifCigarQ9I3W9MF_01825159) - STRLEN(REPLACE(?templateMotifCigarQ9I3W9MF_01825159, CONCAT('^(?:-*[^-]){', STR(((254 - ?templateMotifSequenceMatchBeginPositionQ9I3W9160) + 1)), '}'), '')))), '[a-z]', '')) AS ?step1171) . BIND((STRLEN(SUBSTR(?targetMotifMatchCigarQ9I3W9MF_01825161, 1, (STRLEN(?targetMotifMatchCigarQ9I3W9MF_01825161) - STRLEN(REPLACE(?targetMotifMatchCigarQ9I3W9MF_01825161, CONCAT('^(?:[a-z]*(?:[A-Z]|-)){', STR(?step1171), '}'), ''))))) - STRLEN(REPLACE(SUBSTR(?targetMotifMatchCigarQ9I3W9MF_01825161, 1, (STRLEN(?targetMotifMatchCigarQ9I3W9MF_01825161) - STRLEN(REPLACE(?targetMotifMatchCigarQ9I3W9MF_01825161, CONCAT('^(?:[a-z]*(?:[A-Z]|-)){', STR(?step1171), '}'), '')))), '[^-]', ''))) AS ?step2172) . BIND(((?step2172 + ?targetMotifMatchRegionMatchBeginPositionMF_01825162) - 1) AS ?thisPositionOn40) . BIND(?thisPositionOn40 AS ?thisPositionOn41) . BIND(?this AS ?pfs1t173) . BIND(URI(CONCAT(STR(?thisSequence), '#position', STR(?thisPositionOn40))) AS ?pfsb38) . BIND(URI(CONCAT(STR(?thisSequence), '#position', STR(?thisPositionOn41))) AS ?pfse39) . FILTER ((SUBSTR(?thisSequenceValue, ?thisPositionOn40, 1) = 'H')) . BIND(URI(CONCAT(STR(?this), '#MF_01825a37')) AS ?annotation37) . BIND(?this AS ?pfs36) . } OPTIONAL { ?this up:sequence ?thisSequence . ?thisSequence rdf:value ?thisSequenceValue . ?templateMotifMatch178 faldo:location ?templateMotifSequenceMatchRegionQ9I3W9179 ; edam:is_output_of ?templateMotifSequenceProfileAlignmentOperationQ9I3W9181 ; rdf:type edam:data_0869 ; rdf:value ?templateMotifCigarQ9I3W9MF_01825174 . ?templateMotifSequenceMatchRegionQ9I3W9179 faldo:begin ?templateMotifSequenceMatchBeginQ9I3W9180 . ?templateMotifSequenceMatchBeginQ9I3W9180 faldo:position ?templateMotifSequenceMatchBeginPositionQ9I3W9175 ; faldo:reference isoform:Q9I3W9-1 . ?templateMotifSequenceProfileAlignmentOperationQ9I3W9181 edam:has_input signature:MF_01825 ; rdf:type edam:operation_0300 . ?targetMotifMatch182 faldo:location ?targetMotifMatchRegionMatch183 ; edam:is_output_of ?targetMotifSequenceAlignmentOperationMF_01825185 ; rdf:type edam:data_0869 ; rdf:value ?targetMotifMatchCigarQ9I3W9MF_01825176 . ?targetMotifMatchRegionMatch183 faldo:begin ?targetMotifMatchRegionMatchBeginMF_01825184 . ?targetMotifMatchRegionMatchBeginMF_01825184 faldo:position ?targetMotifMatchRegionMatchBeginPositionMF_01825177 ; faldo:reference ?thisSequence . ?targetMotifSequenceAlignmentOperationMF_01825185 edam:has_input signature:MF_01825 ; rdf:type edam:operation_0300 . BIND(STRLEN(REPLACE(SUBSTR(?templateMotifCigarQ9I3W9MF_01825174, 1, (STRLEN(?templateMotifCigarQ9I3W9MF_01825174) - STRLEN(REPLACE(?templateMotifCigarQ9I3W9MF_01825174, CONCAT('^(?:-*[^-]){', STR(((45 - ?templateMotifSequenceMatchBeginPositionQ9I3W9175) + 1)), '}'), '')))), '[a-z]', '')) AS ?step1186) . BIND((STRLEN(SUBSTR(?targetMotifMatchCigarQ9I3W9MF_01825176, 1, (STRLEN(?targetMotifMatchCigarQ9I3W9MF_01825176) - STRLEN(REPLACE(?targetMotifMatchCigarQ9I3W9MF_01825176, CONCAT('^(?:[a-z]*(?:[A-Z]|-)){', STR(?step1186), '}'), ''))))) - STRLEN(REPLACE(SUBSTR(?targetMotifMatchCigarQ9I3W9MF_01825176, 1, (STRLEN(?targetMotifMatchCigarQ9I3W9MF_01825176) - STRLEN(REPLACE(?targetMotifMatchCigarQ9I3W9MF_01825176, CONCAT('^(?:[a-z]*(?:[A-Z]|-)){', STR(?step1186), '}'), '')))), '[^-]', ''))) AS ?step2187) . BIND(((?step2187 + ?targetMotifMatchRegionMatchBeginPositionMF_01825177) - 1) AS ?thisPositionOn48) . BIND(?thisPositionOn48 AS ?thisPositionOn49) . BIND(?this AS ?pfs1t188) . BIND(URI(CONCAT(STR(?thisSequence), '#position', STR(?thisPositionOn48))) AS ?pfsb44) . BIND(URI(CONCAT(STR(?thisSequence), '#position', STR(?thisPositionOn49))) AS ?pfse45) . FILTER (REGEX('[ST]', SUBSTR(?thisSequenceValue, ?thisPositionOn48, 1))) . BIND(URI(CONCAT(STR(?this), '#MF_01825a43')) AS ?annotation43) . BIND(?this AS ?pfs42) . } OPTIONAL { ?this up:sequence ?thisSequence . ?thisSequence rdf:value ?thisSequenceValue . ?templateMotifMatch193 faldo:location ?templateMotifSequenceMatchRegionQ9I3W9194 ; edam:is_output_of ?templateMotifSequenceProfileAlignmentOperationQ9I3W9196 ; rdf:type edam:data_0869 ; rdf:value ?templateMotifCigarQ9I3W9MF_01825189 . ?templateMotifSequenceMatchRegionQ9I3W9194 faldo:begin ?templateMotifSequenceMatchBeginQ9I3W9195 . ?templateMotifSequenceMatchBeginQ9I3W9195 faldo:position ?templateMotifSequenceMatchBeginPositionQ9I3W9190 ; faldo:reference isoform:Q9I3W9-1 . ?templateMotifSequenceProfileAlignmentOperationQ9I3W9196 edam:has_input signature:MF_01825 ; rdf:type edam:operation_0300 . ?targetMotifMatch197 faldo:location ?targetMotifMatchRegionMatch198 ; edam:is_output_of ?targetMotifSequenceAlignmentOperationMF_01825200 ; rdf:type edam:data_0869 ; rdf:value ?targetMotifMatchCigarQ9I3W9MF_01825191 . ?targetMotifMatchRegionMatch198 faldo:begin ?targetMotifMatchRegionMatchBeginMF_01825199 . ?targetMotifMatchRegionMatchBeginMF_01825199 faldo:position ?targetMotifMatchRegionMatchBeginPositionMF_01825192 ; faldo:reference ?thisSequence . ?targetMotifSequenceAlignmentOperationMF_01825200 edam:has_input signature:MF_01825 ; rdf:type edam:operation_0300 . BIND(STRLEN(REPLACE(SUBSTR(?templateMotifCigarQ9I3W9MF_01825189, 1, (STRLEN(?templateMotifCigarQ9I3W9MF_01825189) - STRLEN(REPLACE(?templateMotifCigarQ9I3W9MF_01825189, CONCAT('^(?:-*[^-]){', STR(((66 - ?templateMotifSequenceMatchBeginPositionQ9I3W9190) + 1)), '}'), '')))), '[a-z]', '')) AS ?step1201) . BIND((STRLEN(SUBSTR(?targetMotifMatchCigarQ9I3W9MF_01825191, 1, (STRLEN(?targetMotifMatchCigarQ9I3W9MF_01825191) - STRLEN(REPLACE(?targetMotifMatchCigarQ9I3W9MF_01825191, CONCAT('^(?:[a-z]*(?:[A-Z]|-)){', STR(?step1201), '}'), ''))))) - STRLEN(REPLACE(SUBSTR(?targetMotifMatchCigarQ9I3W9MF_01825191, 1, (STRLEN(?targetMotifMatchCigarQ9I3W9MF_01825191) - STRLEN(REPLACE(?targetMotifMatchCigarQ9I3W9MF_01825191, CONCAT('^(?:[a-z]*(?:[A-Z]|-)){', STR(?step1201), '}'), '')))), '[^-]', ''))) AS ?step2202) . BIND(((?step2202 + ?targetMotifMatchRegionMatchBeginPositionMF_01825192) - 1) AS ?thisPositionOn56) . BIND(?thisPositionOn56 AS ?thisPositionOn57) . BIND(?this AS ?pfs1t203) . BIND(URI(CONCAT(STR(?thisSequence), '#position', STR(?thisPositionOn56))) AS ?pfsb52) . BIND(URI(CONCAT(STR(?thisSequence), '#position', STR(?thisPositionOn57))) AS ?pfse53) . FILTER ((SUBSTR(?thisSequenceValue, ?thisPositionOn56, 1) = 'T')) . BIND(URI(CONCAT(STR(?this), '#MF_01825a51')) AS ?annotation51) . BIND(?this AS ?pfs50) . } OPTIONAL { ?this up:sequence ?thisSequence . ?thisSequence rdf:value ?thisSequenceValue . ?templateMotifMatch208 faldo:location ?templateMotifSequenceMatchRegionQ9I3W9209 ; edam:is_output_of ?templateMotifSequenceProfileAlignmentOperationQ9I3W9211 ; rdf:type edam:data_0869 ; rdf:value ?templateMotifCigarQ9I3W9MF_01825204 . ?templateMotifSequenceMatchRegionQ9I3W9209 faldo:begin ?templateMotifSequenceMatchBeginQ9I3W9210 . ?templateMotifSequenceMatchBeginQ9I3W9210 faldo:position ?templateMotifSequenceMatchBeginPositionQ9I3W9205 ; faldo:reference isoform:Q9I3W9-1 . ?templateMotifSequenceProfileAlignmentOperationQ9I3W9211 edam:has_input signature:MF_01825 ; rdf:type edam:operation_0300 . ?targetMotifMatch212 faldo:location ?targetMotifMatchRegionMatch213 ; edam:is_output_of ?targetMotifSequenceAlignmentOperationMF_01825215 ; rdf:type edam:data_0869 ; rdf:value ?targetMotifMatchCigarQ9I3W9MF_01825206 . ?targetMotifMatchRegionMatch213 faldo:begin ?targetMotifMatchRegionMatchBeginMF_01825214 . ?targetMotifMatchRegionMatchBeginMF_01825214 faldo:position ?targetMotifMatchRegionMatchBeginPositionMF_01825207 ; faldo:reference ?thisSequence . ?targetMotifSequenceAlignmentOperationMF_01825215 edam:has_input signature:MF_01825 ; rdf:type edam:operation_0300 . BIND(STRLEN(REPLACE(SUBSTR(?templateMotifCigarQ9I3W9MF_01825204, 1, (STRLEN(?templateMotifCigarQ9I3W9MF_01825204) - STRLEN(REPLACE(?templateMotifCigarQ9I3W9MF_01825204, CONCAT('^(?:-*[^-]){', STR(((146 - ?templateMotifSequenceMatchBeginPositionQ9I3W9205) + 1)), '}'), '')))), '[a-z]', '')) AS ?step1216) . BIND((STRLEN(SUBSTR(?targetMotifMatchCigarQ9I3W9MF_01825206, 1, (STRLEN(?targetMotifMatchCigarQ9I3W9MF_01825206) - STRLEN(REPLACE(?targetMotifMatchCigarQ9I3W9MF_01825206, CONCAT('^(?:[a-z]*(?:[A-Z]|-)){', STR(?step1216), '}'), ''))))) - STRLEN(REPLACE(SUBSTR(?targetMotifMatchCigarQ9I3W9MF_01825206, 1, (STRLEN(?targetMotifMatchCigarQ9I3W9MF_01825206) - STRLEN(REPLACE(?targetMotifMatchCigarQ9I3W9MF_01825206, CONCAT('^(?:[a-z]*(?:[A-Z]|-)){', STR(?step1216), '}'), '')))), '[^-]', ''))) AS ?step2217) . BIND(((?step2217 + ?targetMotifMatchRegionMatchBeginPositionMF_01825207) - 1) AS ?thisPositionOn63) . BIND(?thisPositionOn63 AS ?thisPositionOn64) . BIND(?this AS ?pfs1t218) . BIND(URI(CONCAT(STR(?thisSequence), '#position', STR(?thisPositionOn63))) AS ?pfsb60) . BIND(URI(CONCAT(STR(?thisSequence), '#position', STR(?thisPositionOn64))) AS ?pfse61) . FILTER ((SUBSTR(?thisSequenceValue, ?thisPositionOn63, 1) = 'D')) . BIND(URI(CONCAT(STR(?this), '#MF_01825a59')) AS ?annotation59) . BIND(?this AS ?pfs58) . } OPTIONAL { ?this up:sequence ?thisSequence . ?thisSequence rdf:value ?thisSequenceValue . ?templateMotifMatch223 faldo:location ?templateMotifSequenceMatchRegionQ9I3W9224 ; edam:is_output_of ?templateMotifSequenceProfileAlignmentOperationQ9I3W9226 ; rdf:type edam:data_0869 ; rdf:value ?templateMotifCigarQ9I3W9MF_01825219 . ?templateMotifSequenceMatchRegionQ9I3W9224 faldo:begin ?templateMotifSequenceMatchBeginQ9I3W9225 . ?templateMotifSequenceMatchBeginQ9I3W9225 faldo:position ?templateMotifSequenceMatchBeginPositionQ9I3W9220 ; faldo:reference isoform:Q9I3W9-1 . ?templateMotifSequenceProfileAlignmentOperationQ9I3W9226 edam:has_input signature:MF_01825 ; rdf:type edam:operation_0300 . ?targetMotifMatch227 faldo:location ?targetMotifMatchRegionMatch228 ; edam:is_output_of ?targetMotifSequenceAlignmentOperationMF_01825230 ; rdf:type edam:data_0869 ; rdf:value ?targetMotifMatchCigarQ9I3W9MF_01825221 . ?targetMotifMatchRegionMatch228 faldo:begin ?targetMotifMatchRegionMatchBeginMF_01825229 . ?targetMotifMatchRegionMatchBeginMF_01825229 faldo:position ?targetMotifMatchRegionMatchBeginPositionMF_01825222 ; faldo:reference ?thisSequence . ?targetMotifSequenceAlignmentOperationMF_01825230 edam:has_input signature:MF_01825 ; rdf:type edam:operation_0300 . BIND(STRLEN(REPLACE(SUBSTR(?templateMotifCigarQ9I3W9MF_01825219, 1, (STRLEN(?templateMotifCigarQ9I3W9MF_01825219) - STRLEN(REPLACE(?templateMotifCigarQ9I3W9MF_01825219, CONCAT('^(?:-*[^-]){', STR(((175 - ?templateMotifSequenceMatchBeginPositionQ9I3W9220) + 1)), '}'), '')))), '[a-z]', '')) AS ?step1231) . BIND((STRLEN(SUBSTR(?targetMotifMatchCigarQ9I3W9MF_01825221, 1, (STRLEN(?targetMotifMatchCigarQ9I3W9MF_01825221) - STRLEN(REPLACE(?targetMotifMatchCigarQ9I3W9MF_01825221, CONCAT('^(?:[a-z]*(?:[A-Z]|-)){', STR(?step1231), '}'), ''))))) - STRLEN(REPLACE(SUBSTR(?targetMotifMatchCigarQ9I3W9MF_01825221, 1, (STRLEN(?targetMotifMatchCigarQ9I3W9MF_01825221) - STRLEN(REPLACE(?targetMotifMatchCigarQ9I3W9MF_01825221, CONCAT('^(?:[a-z]*(?:[A-Z]|-)){', STR(?step1231), '}'), '')))), '[^-]', ''))) AS ?step2232) . BIND(((?step2232 + ?targetMotifMatchRegionMatchBeginPositionMF_01825222) - 1) AS ?thisPositionOn70) . BIND(?thisPositionOn70 AS ?thisPositionOn71) . BIND(?this AS ?pfs1t233) . BIND(URI(CONCAT(STR(?thisSequence), '#position', STR(?thisPositionOn70))) AS ?pfsb67) . BIND(URI(CONCAT(STR(?thisSequence), '#position', STR(?thisPositionOn71))) AS ?pfse68) . FILTER ((SUBSTR(?thisSequenceValue, ?thisPositionOn70, 1) = 'T')) . BIND(URI(CONCAT(STR(?this), '#MF_01825a66')) AS ?annotation66) . BIND(?this AS ?pfs65) . } OPTIONAL { ?this up:sequence ?thisSequence . ?thisSequence rdf:value ?thisSequenceValue . ?templateMotifMatch238 faldo:location ?templateMotifSequenceMatchRegionQ9I3W9239 ; edam:is_output_of ?templateMotifSequenceProfileAlignmentOperationQ9I3W9241 ; rdf:type edam:data_0869 ; rdf:value ?templateMotifCigarQ9I3W9MF_01825234 . ?templateMotifSequenceMatchRegionQ9I3W9239 faldo:begin ?templateMotifSequenceMatchBeginQ9I3W9240 . ?templateMotifSequenceMatchBeginQ9I3W9240 faldo:position ?templateMotifSequenceMatchBeginPositionQ9I3W9235 ; faldo:reference isoform:Q9I3W9-1 . ?templateMotifSequenceProfileAlignmentOperationQ9I3W9241 edam:has_input signature:MF_01825 ; rdf:type edam:operation_0300 . ?targetMotifMatch242 faldo:location ?targetMotifMatchRegionMatch243 ; edam:is_output_of ?targetMotifSequenceAlignmentOperationMF_01825245 ; rdf:type edam:data_0869 ; rdf:value ?targetMotifMatchCigarQ9I3W9MF_01825236 . ?targetMotifMatchRegionMatch243 faldo:begin ?targetMotifMatchRegionMatchBeginMF_01825244 . ?targetMotifMatchRegionMatchBeginMF_01825244 faldo:position ?targetMotifMatchRegionMatchBeginPositionMF_01825237 ; faldo:reference ?thisSequence . ?targetMotifSequenceAlignmentOperationMF_01825245 edam:has_input signature:MF_01825 ; rdf:type edam:operation_0300 . BIND(STRLEN(REPLACE(SUBSTR(?templateMotifCigarQ9I3W9MF_01825234, 1, (STRLEN(?templateMotifCigarQ9I3W9MF_01825234) - STRLEN(REPLACE(?templateMotifCigarQ9I3W9MF_01825234, CONCAT('^(?:-*[^-]){', STR(((232 - ?templateMotifSequenceMatchBeginPositionQ9I3W9235) + 1)), '}'), '')))), '[a-z]', '')) AS ?step1246) . BIND((STRLEN(SUBSTR(?targetMotifMatchCigarQ9I3W9MF_01825236, 1, (STRLEN(?targetMotifMatchCigarQ9I3W9MF_01825236) - STRLEN(REPLACE(?targetMotifMatchCigarQ9I3W9MF_01825236, CONCAT('^(?:[a-z]*(?:[A-Z]|-)){', STR(?step1246), '}'), ''))))) - STRLEN(REPLACE(SUBSTR(?targetMotifMatchCigarQ9I3W9MF_01825236, 1, (STRLEN(?targetMotifMatchCigarQ9I3W9MF_01825236) - STRLEN(REPLACE(?targetMotifMatchCigarQ9I3W9MF_01825236, CONCAT('^(?:[a-z]*(?:[A-Z]|-)){', STR(?step1246), '}'), '')))), '[^-]', ''))) AS ?step2247) . BIND(((?step2247 + ?targetMotifMatchRegionMatchBeginPositionMF_01825237) - 1) AS ?thisPositionOn77) . BIND(?thisPositionOn77 AS ?thisPositionOn78) . BIND(?this AS ?pfs1t248) . BIND(URI(CONCAT(STR(?thisSequence), '#position', STR(?thisPositionOn77))) AS ?pfsb74) . BIND(URI(CONCAT(STR(?thisSequence), '#position', STR(?thisPositionOn78))) AS ?pfse75) . FILTER ((SUBSTR(?thisSequenceValue, ?thisPositionOn77, 1) = 'D')) . BIND(URI(CONCAT(STR(?this), '#MF_01825a73')) AS ?annotation73) . BIND(?this AS ?pfs72) . } OPTIONAL { ?this up:sequence ?thisSequence . ?thisSequence rdf:value ?thisSequenceValue . ?templateMotifMatch253 faldo:location ?templateMotifSequenceMatchRegionQ9I3W9254 ; edam:is_output_of ?templateMotifSequenceProfileAlignmentOperationQ9I3W9256 ; rdf:type edam:data_0869 ; rdf:value ?templateMotifCigarQ9I3W9MF_01825249 . ?templateMotifSequenceMatchRegionQ9I3W9254 faldo:begin ?templateMotifSequenceMatchBeginQ9I3W9255 . ?templateMotifSequenceMatchBeginQ9I3W9255 faldo:position ?templateMotifSequenceMatchBeginPositionQ9I3W9250 ; faldo:reference isoform:Q9I3W9-1 . ?templateMotifSequenceProfileAlignmentOperationQ9I3W9256 edam:has_input signature:MF_01825 ; rdf:type edam:operation_0300 . ?targetMotifMatch257 faldo:location ?targetMotifMatchRegionMatch258 ; edam:is_output_of ?targetMotifSequenceAlignmentOperationMF_01825260 ; rdf:type edam:data_0869 ; rdf:value ?targetMotifMatchCigarQ9I3W9MF_01825251 . ?targetMotifMatchRegionMatch258 faldo:begin ?targetMotifMatchRegionMatchBeginMF_01825259 . ?targetMotifMatchRegionMatchBeginMF_01825259 faldo:position ?targetMotifMatchRegionMatchBeginPositionMF_01825252 ; faldo:reference ?thisSequence . ?targetMotifSequenceAlignmentOperationMF_01825260 edam:has_input signature:MF_01825 ; rdf:type edam:operation_0300 . BIND(STRLEN(REPLACE(SUBSTR(?templateMotifCigarQ9I3W9MF_01825249, 1, (STRLEN(?templateMotifCigarQ9I3W9MF_01825249) - STRLEN(REPLACE(?templateMotifCigarQ9I3W9MF_01825249, CONCAT('^(?:-*[^-]){', STR(((257 - ?templateMotifSequenceMatchBeginPositionQ9I3W9250) + 1)), '}'), '')))), '[a-z]', '')) AS ?step1261) . BIND((STRLEN(SUBSTR(?targetMotifMatchCigarQ9I3W9MF_01825251, 1, (STRLEN(?targetMotifMatchCigarQ9I3W9MF_01825251) - STRLEN(REPLACE(?targetMotifMatchCigarQ9I3W9MF_01825251, CONCAT('^(?:[a-z]*(?:[A-Z]|-)){', STR(?step1261), '}'), ''))))) - STRLEN(REPLACE(SUBSTR(?targetMotifMatchCigarQ9I3W9MF_01825251, 1, (STRLEN(?targetMotifMatchCigarQ9I3W9MF_01825251) - STRLEN(REPLACE(?targetMotifMatchCigarQ9I3W9MF_01825251, CONCAT('^(?:[a-z]*(?:[A-Z]|-)){', STR(?step1261), '}'), '')))), '[^-]', ''))) AS ?step2262) . BIND(((?step2262 + ?targetMotifMatchRegionMatchBeginPositionMF_01825252) - 1) AS ?thisPositionOn84) . BIND(?thisPositionOn84 AS ?thisPositionOn85) . BIND(?this AS ?pfs1t263) . BIND(URI(CONCAT(STR(?thisSequence), '#position', STR(?thisPositionOn84))) AS ?pfsb81) . BIND(URI(CONCAT(STR(?thisSequence), '#position', STR(?thisPositionOn85))) AS ?pfse82) . FILTER ((SUBSTR(?thisSequenceValue, ?thisPositionOn84, 1) = 'G')) . BIND(URI(CONCAT(STR(?this), '#MF_01825a80')) AS ?annotation80) . BIND(?this AS ?pfs79) . } OPTIONAL { ?this up:sequence ?thisSequence . ?thisSequence rdf:value ?thisSequenceValue . ?templateMotifMatch268 faldo:location ?templateMotifSequenceMatchRegionQ9I3W9269 ; edam:is_output_of ?templateMotifSequenceProfileAlignmentOperationQ9I3W9271 ; rdf:type edam:data_0869 ; rdf:value ?templateMotifCigarQ9I3W9MF_01825264 . ?templateMotifSequenceMatchRegionQ9I3W9269 faldo:begin ?templateMotifSequenceMatchBeginQ9I3W9270 . ?templateMotifSequenceMatchBeginQ9I3W9270 faldo:position ?templateMotifSequenceMatchBeginPositionQ9I3W9265 ; faldo:reference isoform:Q9I3W9-1 . ?templateMotifSequenceProfileAlignmentOperationQ9I3W9271 edam:has_input signature:MF_01825 ; rdf:type edam:operation_0300 . ?targetMotifMatch272 faldo:location ?targetMotifMatchRegionMatch273 ; edam:is_output_of ?targetMotifSequenceAlignmentOperationMF_01825275 ; rdf:type edam:data_0869 ; rdf:value ?targetMotifMatchCigarQ9I3W9MF_01825266 . ?targetMotifMatchRegionMatch273 faldo:begin ?targetMotifMatchRegionMatchBeginMF_01825274 . ?targetMotifMatchRegionMatchBeginMF_01825274 faldo:position ?targetMotifMatchRegionMatchBeginPositionMF_01825267 ; faldo:reference ?thisSequence . ?targetMotifSequenceAlignmentOperationMF_01825275 edam:has_input signature:MF_01825 ; rdf:type edam:operation_0300 . BIND(STRLEN(REPLACE(SUBSTR(?templateMotifCigarQ9I3W9MF_01825264, 1, (STRLEN(?templateMotifCigarQ9I3W9MF_01825264) - STRLEN(REPLACE(?templateMotifCigarQ9I3W9MF_01825264, CONCAT('^(?:-*[^-]){', STR(((258 - ?templateMotifSequenceMatchBeginPositionQ9I3W9265) + 1)), '}'), '')))), '[a-z]', '')) AS ?step1276) . BIND((STRLEN(SUBSTR(?targetMotifMatchCigarQ9I3W9MF_01825266, 1, (STRLEN(?targetMotifMatchCigarQ9I3W9MF_01825266) - STRLEN(REPLACE(?targetMotifMatchCigarQ9I3W9MF_01825266, CONCAT('^(?:[a-z]*(?:[A-Z]|-)){', STR(?step1276), '}'), ''))))) - STRLEN(REPLACE(SUBSTR(?targetMotifMatchCigarQ9I3W9MF_01825266, 1, (STRLEN(?targetMotifMatchCigarQ9I3W9MF_01825266) - STRLEN(REPLACE(?targetMotifMatchCigarQ9I3W9MF_01825266, CONCAT('^(?:[a-z]*(?:[A-Z]|-)){', STR(?step1276), '}'), '')))), '[^-]', ''))) AS ?step2277) . BIND(((?step2277 + ?targetMotifMatchRegionMatchBeginPositionMF_01825267) - 1) AS ?thisPositionOn92) . BIND(?thisPositionOn92 AS ?thisPositionOn93) . BIND(?this AS ?pfs1t278) . BIND(URI(CONCAT(STR(?thisSequence), '#position', STR(?thisPositionOn92))) AS ?pfsb88) . BIND(URI(CONCAT(STR(?thisSequence), '#position', STR(?thisPositionOn93))) AS ?pfse89) . FILTER ((SUBSTR(?thisSequenceValue, ?thisPositionOn92, 1) = 'Y')) . BIND(URI(CONCAT(STR(?this), '#MF_01825a87')) AS ?annotation87) . BIND(?this AS ?pfs86) . } }