CONSTRUCT { _:642280 up:source unirule:MF_01836 . _:642281 up:source unirule:MF_01836 . _:642282 up:source unirule:MF_01836 . _:642283 up:source unirule:MF_01836 . _:642284 up:source unirule:MF_01836 . _:642285 up:source unirule:MF_01836 . _:642286 up:source unirule:MF_01836 . _:642287 up:source unirule:MF_01836 . _:642288 up:source unirule:MF_01836 . _:642289 up:source unirule:MF_01836 . _:642290 up:source unirule:MF_01836 . _:642291 up:source unirule:MF_01836 . _:642292 up:source unirule:MF_01836 . _:642293 up:source unirule:MF_01836 . _:642294 up:source unirule:MF_01836 . _:642295 up:source unirule:MF_01836 . _:642296 up:source unirule:MF_01836 . _:642297 up:source unirule:MF_01836 . _:642298 up:source unirule:MF_01836 . _:642299 up:source unirule:MF_01836 . _:642300 up:source unirule:MF_01836 . _:642301 up:source unirule:MF_01836 . _:642302 up:source unirule:MF_01836 . _:642303 up:source unirule:MF_01836 . _:642304 up:source unirule:MF_01836 . _:642305 up:source unirule:MF_01836 . _:642306 up:source unirule:MF_01836 . _:642307 up:source unirule:MF_01836 . _:642308 up:source unirule:MF_01836 . _:642309 up:source unirule:MF_01836 . _:642310 up:source unirule:MF_01836 . _:642311 up:source unirule:MF_01836 . _:642312 up:source unirule:MF_01836 . _:642313 up:source unirule:MF_01836 . _:642314 up:source unirule:MF_01836 . _:642315 up:source unirule:MF_01836 . _:642316 up:source unirule:MF_01836 . _:642317 up:source unirule:MF_01836 . _:642318 up:source unirule:MF_01836 . _:642319 up:source unirule:MF_01836 . _:642320 up:source unirule:MF_01836 . _:642321 up:source unirule:MF_01836 . _:642322 up:source unirule:MF_01836 . _:642323 up:source unirule:MF_01836 . _:642324 up:source unirule:MF_01836 . _:642325 up:source unirule:MF_01836 . _:642326 up:source unirule:MF_01836 . _:642327 up:source unirule:MF_01836 . _:642328 up:source unirule:MF_01836 . _:642329 up:source unirule:MF_01836 . _:642330 up:source unirule:MF_01836 . _:642331 up:source unirule:MF_01836 . _:642332 up:source unirule:MF_01836 . _:642333 up:source unirule:MF_01836 . _:642334 up:source unirule:MF_01836 . _:642335 up:source unirule:MF_01836 . _:642336 up:source unirule:MF_01836 . ?this up:annotation ?annotation2 ; up:classifiedWith GO:0000287 , GO:0004712 , GO:0005524 , GO:0007623 , keyword:378 , keyword:418 , keyword:460 , keyword:479 , keyword:547 , keyword:677 , keyword:678 , keyword:67 , keyword:723 , keyword:804 , keyword:805 , keyword:808 , keyword:90 ; up:recommendedName ?name0 . ?name0 up:ecName '2.7.11.1' , '3.6.4.-' ; up:fullName 'Circadian clock oscillator protein KaiC' ; rdf:type up:Structured_Name . ?gene1 skos:prefLabel 'kaiC' . ?annotation2 a up:Similarity_Annotation ; rdfs:comment 'Belongs to the KaiC family.' . ?case3 up:classifiedWith keyword:597 . ?pfs6 up:annotation ?annotation7 . ?annotation7 faldo:begin ?pfsb8 ; faldo:end ?pfse9 ; rdf:type up:Modified_Residue_Annotation ; rdfs:comment 'Phosphoserine; by autocatalysis' . ?pfsb8 faldo:position ?thisPositionOn10 ; rdf:type faldo:ExactPosition . ?pfse9 faldo:position ?thisPositionOn11 ; rdf:type faldo:ExactPosition . ?pfs12 up:annotation ?annotation13 . ?annotation13 faldo:begin ?pfsb14 ; faldo:end ?pfse15 ; rdf:type up:Modified_Residue_Annotation ; rdfs:comment 'Phosphothreonine; by autocatalysis' . ?pfsb14 faldo:position ?thisPositionOn16 ; rdf:type faldo:ExactPosition . ?pfse15 faldo:position ?thisPositionOn17 ; rdf:type faldo:ExactPosition . ?pfs18 up:annotation ?annotation19 . ?annotation19 faldo:begin ?pfsb20 ; faldo:end ?pfse21 ; rdf:type up:Domain_Extent_Annotation ; rdfs:comment 'KaiC 1' . ?pfsb20 faldo:position ?thisPositionOn22 ; rdf:type faldo:ExactPosition . ?pfse21 faldo:position ?thisPositionOn23 ; rdf:type faldo:ExactPosition . ?pfs24 up:annotation ?annotation25 . ?annotation25 faldo:begin ?pfsb26 ; faldo:end ?pfse27 ; rdf:type up:Domain_Extent_Annotation ; rdfs:comment 'KaiC 2' . ?pfsb26 faldo:position ?thisPositionOn28 ; rdf:type faldo:ExactPosition . ?pfse27 faldo:position ?thisPositionOn29 ; rdf:type faldo:ExactPosition . ?pfs30 up:annotation ?annotation31 . ?annotation31 faldo:begin ?pfsb32 ; faldo:end ?pfse33 ; up:ligand ?ligand34 ; rdf:type up:Binding_Site_Annotation . ?pfsb32 faldo:position ?thisPositionOn35 ; rdf:type faldo:ExactPosition . ?pfse33 faldo:position ?thisPositionOn36 ; rdf:type faldo:ExactPosition . ?ligand34 rdfs:subClassOf chebi:30616 . ?pfs37 up:annotation ?annotation38 . ?annotation38 faldo:begin ?pfsb39 ; faldo:end ?pfse40 ; up:ligand ?ligand41 ; rdf:type up:Binding_Site_Annotation . ?pfsb39 faldo:position ?thisPositionOn42 ; rdf:type faldo:ExactPosition . ?pfse40 faldo:position ?thisPositionOn43 ; rdf:type faldo:ExactPosition . ?ligand41 rdfs:subClassOf chebi:30616 . ?pfs44 up:annotation ?annotation45 . ?annotation45 faldo:begin ?pfsb46 ; faldo:end ?pfse47 ; up:ligand ?ligand48 ; rdf:type up:Binding_Site_Annotation . ?pfsb46 faldo:position ?thisPositionOn49 ; rdf:type faldo:ExactPosition . ?pfse47 faldo:position ?thisPositionOn50 ; rdf:type faldo:ExactPosition . ?ligand48 rdfs:subClassOf chebi:30616 . ?pfs51 up:annotation ?annotation52 . ?annotation52 faldo:begin ?pfsb53 ; faldo:end ?pfse54 ; up:ligand ?ligand55 ; rdf:type up:Binding_Site_Annotation . ?pfsb53 faldo:position ?thisPositionOn56 ; rdf:type faldo:ExactPosition . ?pfse54 faldo:position ?thisPositionOn57 ; rdf:type faldo:ExactPosition . ?ligand55 rdfs:subClassOf chebi:30616 . ?pfs58 up:annotation ?annotation59 . ?annotation59 faldo:begin ?pfsb60 ; faldo:end ?pfse61 ; up:ligand ?ligand62 ; rdf:type up:Binding_Site_Annotation . ?pfsb60 faldo:position ?thisPositionOn63 ; rdf:type faldo:ExactPosition . ?pfse61 faldo:position ?thisPositionOn64 ; rdf:type faldo:ExactPosition . ?ligand62 rdfs:subClassOf chebi:30616 . ?pfs65 up:annotation ?annotation66 . ?annotation66 faldo:begin ?pfsb67 ; faldo:end ?pfse68 ; up:ligand ?ligand69 ; rdf:type up:Binding_Site_Annotation . ?pfsb67 faldo:position ?thisPositionOn70 ; rdf:type faldo:ExactPosition . ?pfse68 faldo:position ?thisPositionOn71 ; rdf:type faldo:ExactPosition . ?ligand69 rdfs:subClassOf chebi:18420 . ?pfs72 up:annotation ?annotation73 . ?annotation73 faldo:begin ?pfsb74 ; faldo:end ?pfse75 ; up:ligand ?ligand76 ; rdf:type up:Binding_Site_Annotation . ?pfsb74 faldo:position ?thisPositionOn77 ; rdf:type faldo:ExactPosition . ?pfse75 faldo:position ?thisPositionOn78 ; rdf:type faldo:ExactPosition . ?ligand76 rdfs:subClassOf chebi:30616 . ?pfs79 up:annotation ?annotation80 . ?annotation80 faldo:begin ?pfsb81 ; faldo:end ?pfse82 ; up:ligand ?ligand83 ; rdf:type up:Binding_Site_Annotation . ?pfsb81 faldo:position ?thisPositionOn84 ; rdf:type faldo:ExactPosition . ?pfse82 faldo:position ?thisPositionOn85 ; rdf:type faldo:ExactPosition . ?ligand83 rdfs:subClassOf chebi:30616 . ?pfs86 up:annotation ?annotation87 . ?annotation87 faldo:begin ?pfsb88 ; faldo:end ?pfse89 ; up:ligand ?ligand90 ; rdf:type up:Binding_Site_Annotation . ?pfsb88 faldo:position ?thisPositionOn91 ; rdf:type faldo:ExactPosition . ?pfse89 faldo:position ?thisPositionOn92 ; rdf:type faldo:ExactPosition . ?ligand90 rdfs:subClassOf chebi:30616 . ?pfs93 up:annotation ?annotation94 . ?annotation94 faldo:begin ?pfsb95 ; faldo:end ?pfse96 ; up:ligand ?ligand97 ; rdf:type up:Binding_Site_Annotation . ?pfsb95 faldo:position ?thisPositionOn98 ; rdf:type faldo:ExactPosition . ?pfse96 faldo:position ?thisPositionOn99 ; rdf:type faldo:ExactPosition . ?ligand97 rdfs:subClassOf chebi:30616 . ?pfs100 up:annotation ?annotation101 . ?annotation101 faldo:begin ?pfsb102 ; faldo:end ?pfse103 ; up:ligand ?ligand104 ; rdf:type up:Binding_Site_Annotation . ?pfsb102 faldo:position ?thisPositionOn105 ; rdf:type faldo:ExactPosition . ?pfse103 faldo:position ?thisPositionOn106 ; rdf:type faldo:ExactPosition . ?ligand104 rdfs:subClassOf chebi:30616 . ?pfs107 up:annotation ?annotation108 . ?annotation108 faldo:begin ?pfsb109 ; faldo:end ?pfse110 ; up:ligand ?ligand111 ; rdf:type up:Binding_Site_Annotation . ?pfsb109 faldo:position ?thisPositionOn112 ; rdf:type faldo:ExactPosition . ?pfse110 faldo:position ?thisPositionOn113 ; rdf:type faldo:ExactPosition . ?ligand111 rdfs:subClassOf chebi:30616 . ?pfs114 up:annotation ?annotation115 . ?annotation115 faldo:begin ?pfsb116 ; faldo:end ?pfse117 ; up:ligand ?ligand118 ; rdf:type up:Binding_Site_Annotation . ?pfsb116 faldo:position ?thisPositionOn119 ; rdf:type faldo:ExactPosition . ?pfse117 faldo:position ?thisPositionOn120 ; rdf:type faldo:ExactPosition . ?ligand118 rdfs:subClassOf chebi:30616 . ?pfs121 up:annotation ?annotation122 . ?annotation122 faldo:begin ?pfsb123 ; faldo:end ?pfse124 ; up:ligand ?ligand125 ; rdf:type up:Binding_Site_Annotation . ?pfsb123 faldo:position ?thisPositionOn126 ; rdf:type faldo:ExactPosition . ?pfse124 faldo:position ?thisPositionOn127 ; rdf:type faldo:ExactPosition . ?ligand125 rdfs:subClassOf chebi:30616 . ?pfs128 up:annotation ?annotation129 . ?annotation129 faldo:begin ?pfsb130 ; faldo:end ?pfse131 ; up:ligand ?ligand132 ; rdf:type up:Binding_Site_Annotation . ?pfsb130 faldo:position ?thisPositionOn133 ; rdf:type faldo:ExactPosition . ?pfse131 faldo:position ?thisPositionOn134 ; rdf:type faldo:ExactPosition . ?ligand132 rdfs:subClassOf chebi:30616 . ?pfs135 up:annotation ?annotation136 . ?annotation136 faldo:begin ?pfsb137 ; faldo:end ?pfse138 ; up:ligand ?ligand139 ; rdf:type up:Binding_Site_Annotation . ?pfsb137 faldo:position ?thisPositionOn140 ; rdf:type faldo:ExactPosition . ?pfse138 faldo:position ?thisPositionOn141 ; rdf:type faldo:ExactPosition . ?ligand139 rdfs:subClassOf chebi:30616 . ?pfs142 up:annotation ?annotation143 . ?annotation143 faldo:begin ?pfsb144 ; faldo:end ?pfse145 ; up:ligand ?ligand146 ; rdf:type up:Binding_Site_Annotation . ?pfsb144 faldo:position ?thisPositionOn147 ; rdf:type faldo:ExactPosition . ?pfse145 faldo:position ?thisPositionOn148 ; rdf:type faldo:ExactPosition . ?ligand146 rdfs:subClassOf chebi:30616 . ?pfs149 up:annotation ?annotation150 . ?annotation150 faldo:begin ?pfsb151 ; faldo:end ?pfse152 ; up:ligand ?ligand153 ; rdf:type up:Binding_Site_Annotation . ?pfsb151 faldo:position ?thisPositionOn154 ; rdf:type faldo:ExactPosition . ?pfse152 faldo:position ?thisPositionOn155 ; rdf:type faldo:ExactPosition . ?ligand153 rdfs:subClassOf chebi:30616 . ?pfs156 up:annotation ?annotation157 . ?annotation157 faldo:begin ?pfsb158 ; faldo:end ?pfse159 ; up:ligand ?ligand160 ; rdf:type up:Binding_Site_Annotation . ?pfsb158 faldo:position ?thisPositionOn161 ; rdf:type faldo:ExactPosition . ?pfse159 faldo:position ?thisPositionOn162 ; rdf:type faldo:ExactPosition . ?ligand160 rdfs:subClassOf chebi:30616 . ?pfs163 up:annotation ?annotation164 . ?annotation164 faldo:begin ?pfsb165 ; faldo:end ?pfse166 ; up:ligand ?ligand167 ; rdf:type up:Binding_Site_Annotation . ?pfsb165 faldo:position ?thisPositionOn168 ; rdf:type faldo:ExactPosition . ?pfse166 faldo:position ?thisPositionOn169 ; rdf:type faldo:ExactPosition . ?ligand167 rdfs:subClassOf chebi:30616 . ?pfs170 up:annotation ?annotation171 . ?annotation171 faldo:begin ?pfsb172 ; faldo:end ?pfse173 ; up:ligand ?ligand174 ; rdf:type up:Binding_Site_Annotation . ?pfsb172 faldo:position ?thisPositionOn175 ; rdf:type faldo:ExactPosition . ?pfse173 faldo:position ?thisPositionOn176 ; rdf:type faldo:ExactPosition . ?ligand174 rdfs:subClassOf chebi:30616 . ?pfs177 up:annotation ?annotation178 . ?annotation178 faldo:begin ?pfsb179 ; faldo:end ?pfse180 ; up:ligand ?ligand181 ; rdf:type up:Binding_Site_Annotation . ?pfsb179 faldo:position ?thisPositionOn182 ; rdf:type faldo:ExactPosition . ?pfse180 faldo:position ?thisPositionOn183 ; rdf:type faldo:ExactPosition . ?ligand181 rdfs:subClassOf chebi:18420 . ?pfs184 up:annotation ?annotation185 . ?annotation185 faldo:begin ?pfsb186 ; faldo:end ?pfse187 ; up:ligand ?ligand188 ; rdf:type up:Binding_Site_Annotation . ?pfsb186 faldo:position ?thisPositionOn189 ; rdf:type faldo:ExactPosition . ?pfse187 faldo:position ?thisPositionOn190 ; rdf:type faldo:ExactPosition . ?ligand188 rdfs:subClassOf chebi:30616 . ?pfs191 up:annotation ?annotation192 . ?annotation192 faldo:begin ?pfsb193 ; faldo:end ?pfse194 ; up:ligand ?ligand195 ; rdf:type up:Binding_Site_Annotation . ?pfsb193 faldo:position ?thisPositionOn196 ; rdf:type faldo:ExactPosition . ?pfse194 faldo:position ?thisPositionOn197 ; rdf:type faldo:ExactPosition . ?ligand195 rdfs:subClassOf chebi:18420 . ?pfs198 up:annotation ?annotation199 . ?annotation199 faldo:begin ?pfsb200 ; faldo:end ?pfse201 ; up:ligand ?ligand202 ; rdf:type up:Binding_Site_Annotation . ?pfsb200 faldo:position ?thisPositionOn203 ; 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rdf:object ?annotation45 . _:642372 a rdf:Statement ; up:source unirule:MF_01836 ; rdf:subject ?pfs51 ; rdf:predicate up:annotation ; rdf:object ?annotation52 . _:642373 a rdf:Statement ; up:attribution _:642308 ; rdf:subject ?pfs51 ; rdf:predicate up:annotation ; rdf:object ?annotation52 . _:642374 a rdf:Statement ; up:source unirule:MF_01836 ; rdf:subject ?pfs58 ; rdf:predicate up:annotation ; rdf:object ?annotation59 . _:642375 a rdf:Statement ; up:attribution _:642309 ; rdf:subject ?pfs58 ; rdf:predicate up:annotation ; rdf:object ?annotation59 . _:642376 a rdf:Statement ; up:source unirule:MF_01836 ; rdf:subject ?pfs65 ; rdf:predicate up:annotation ; rdf:object ?annotation66 . _:642377 a rdf:Statement ; up:attribution _:642310 ; rdf:subject ?pfs65 ; rdf:predicate up:annotation ; rdf:object ?annotation66 . _:642378 a rdf:Statement ; up:source unirule:MF_01836 ; rdf:subject ?pfs72 ; rdf:predicate up:annotation ; rdf:object ?annotation73 . _:642379 a rdf:Statement ; up:attribution _:642311 ; rdf:subject ?pfs72 ; rdf:predicate up:annotation ; rdf:object ?annotation73 . _:642380 a rdf:Statement ; up:source unirule:MF_01836 ; rdf:subject ?pfs79 ; rdf:predicate up:annotation ; rdf:object ?annotation80 . _:642381 a rdf:Statement ; up:attribution _:642312 ; rdf:subject ?pfs79 ; rdf:predicate up:annotation ; rdf:object ?annotation80 . _:642382 a rdf:Statement ; up:source unirule:MF_01836 ; rdf:subject ?pfs86 ; rdf:predicate up:annotation ; rdf:object ?annotation87 . _:642383 a rdf:Statement ; up:attribution _:642313 ; rdf:subject ?pfs86 ; rdf:predicate up:annotation ; rdf:object ?annotation87 . _:642384 a rdf:Statement ; up:source unirule:MF_01836 ; rdf:subject ?pfs93 ; rdf:predicate up:annotation ; rdf:object ?annotation94 . _:642385 a rdf:Statement ; up:attribution _:642314 ; rdf:subject ?pfs93 ; rdf:predicate up:annotation ; rdf:object ?annotation94 . _:642386 a rdf:Statement ; up:source unirule:MF_01836 ; rdf:subject ?pfs100 ; rdf:predicate up:annotation ; rdf:object ?annotation101 . _:642387 a rdf:Statement ; up:attribution _:642315 ; rdf:subject ?pfs100 ; rdf:predicate up:annotation ; rdf:object ?annotation101 . _:642388 a rdf:Statement ; up:source unirule:MF_01836 ; rdf:subject ?pfs107 ; rdf:predicate up:annotation ; rdf:object ?annotation108 . _:642389 a rdf:Statement ; up:attribution _:642316 ; rdf:subject ?pfs107 ; rdf:predicate up:annotation ; rdf:object ?annotation108 . _:642390 a rdf:Statement ; up:source unirule:MF_01836 ; rdf:subject ?pfs114 ; rdf:predicate up:annotation ; rdf:object ?annotation115 . _:642391 a rdf:Statement ; up:attribution _:642317 ; rdf:subject ?pfs114 ; rdf:predicate up:annotation ; rdf:object ?annotation115 . _:642392 a rdf:Statement ; up:source unirule:MF_01836 ; rdf:subject ?pfs121 ; rdf:predicate up:annotation ; rdf:object ?annotation122 . _:642393 a rdf:Statement ; up:attribution _:642318 ; rdf:subject ?pfs121 ; rdf:predicate up:annotation ; rdf:object ?annotation122 . _:642394 a rdf:Statement ; up:source unirule:MF_01836 ; rdf:subject ?pfs128 ; rdf:predicate up:annotation ; rdf:object ?annotation129 . _:642395 a rdf:Statement ; up:attribution _:642319 ; rdf:subject ?pfs128 ; rdf:predicate up:annotation ; rdf:object ?annotation129 . _:642396 a rdf:Statement ; up:source unirule:MF_01836 ; rdf:subject ?pfs135 ; rdf:predicate up:annotation ; rdf:object ?annotation136 . _:642397 a rdf:Statement ; up:attribution _:642320 ; rdf:subject ?pfs135 ; rdf:predicate up:annotation ; rdf:object ?annotation136 . _:642398 a rdf:Statement ; up:source unirule:MF_01836 ; rdf:subject ?pfs142 ; rdf:predicate up:annotation ; rdf:object ?annotation143 . _:642399 a rdf:Statement ; up:attribution _:642321 ; rdf:subject ?pfs142 ; rdf:predicate up:annotation ; rdf:object ?annotation143 . _:642400 a rdf:Statement ; up:source unirule:MF_01836 ; rdf:subject ?pfs149 ; rdf:predicate up:annotation ; rdf:object ?annotation150 . _:642401 a rdf:Statement ; up:attribution _:642322 ; rdf:subject ?pfs149 ; rdf:predicate up:annotation ; rdf:object ?annotation150 . _:642402 a rdf:Statement ; up:source unirule:MF_01836 ; rdf:subject ?pfs156 ; rdf:predicate up:annotation ; rdf:object ?annotation157 . _:642403 a rdf:Statement ; up:attribution _:642323 ; rdf:subject ?pfs156 ; rdf:predicate up:annotation ; rdf:object ?annotation157 . _:642404 a rdf:Statement ; up:source unirule:MF_01836 ; rdf:subject ?pfs163 ; rdf:predicate up:annotation ; rdf:object ?annotation164 . _:642405 a rdf:Statement ; up:attribution _:642324 ; rdf:subject ?pfs163 ; rdf:predicate up:annotation ; rdf:object ?annotation164 . _:642406 a rdf:Statement ; up:source unirule:MF_01836 ; rdf:subject ?pfs170 ; rdf:predicate up:annotation ; rdf:object ?annotation171 . _:642407 a rdf:Statement ; up:attribution _:642325 ; rdf:subject ?pfs170 ; rdf:predicate up:annotation ; rdf:object ?annotation171 . _:642408 a rdf:Statement ; up:source unirule:MF_01836 ; rdf:subject ?pfs177 ; rdf:predicate up:annotation ; rdf:object ?annotation178 . _:642409 a rdf:Statement ; up:attribution _:642326 ; rdf:subject ?pfs177 ; rdf:predicate up:annotation ; rdf:object ?annotation178 . _:642410 a rdf:Statement ; up:source unirule:MF_01836 ; rdf:subject ?pfs184 ; rdf:predicate up:annotation ; rdf:object ?annotation185 . _:642411 a rdf:Statement ; up:attribution _:642327 ; rdf:subject ?pfs184 ; rdf:predicate up:annotation ; rdf:object ?annotation185 . _:642412 a rdf:Statement ; up:source unirule:MF_01836 ; rdf:subject ?pfs191 ; rdf:predicate up:annotation ; rdf:object ?annotation192 . _:642413 a rdf:Statement ; up:attribution _:642328 ; rdf:subject ?pfs191 ; rdf:predicate up:annotation ; rdf:object ?annotation192 . _:642414 a rdf:Statement ; up:source unirule:MF_01836 ; rdf:subject ?pfs198 ; rdf:predicate up:annotation ; rdf:object ?annotation199 . _:642415 a rdf:Statement ; up:attribution _:642329 ; rdf:subject ?pfs198 ; rdf:predicate up:annotation ; rdf:object ?annotation199 . _:642416 a rdf:Statement ; up:source unirule:MF_01836 ; rdf:subject ?pfs205 ; rdf:predicate up:annotation ; rdf:object ?annotation206 . _:642417 a rdf:Statement ; up:attribution _:642330 ; rdf:subject ?pfs205 ; rdf:predicate up:annotation ; rdf:object ?annotation206 . _:642418 a rdf:Statement ; up:source unirule:MF_01836 ; rdf:subject ?pfs212 ; rdf:predicate up:annotation ; rdf:object ?annotation213 . _:642419 a rdf:Statement ; up:attribution _:642331 ; rdf:subject ?pfs212 ; rdf:predicate up:annotation ; rdf:object ?annotation213 . _:642420 a rdf:Statement ; up:source unirule:MF_01836 ; rdf:subject ?pfs219 ; rdf:predicate up:annotation ; rdf:object ?annotation220 . _:642421 a rdf:Statement ; up:attribution _:642332 ; rdf:subject ?pfs219 ; rdf:predicate up:annotation ; rdf:object ?annotation220 . _:642422 a rdf:Statement ; up:source unirule:MF_01836 ; rdf:subject ?pfs226 ; rdf:predicate up:annotation ; rdf:object ?annotation227 . _:642423 a rdf:Statement ; up:attribution _:642333 ; rdf:subject ?pfs226 ; rdf:predicate up:annotation ; rdf:object ?annotation227 . _:642424 a rdf:Statement ; up:source unirule:MF_01836 ; rdf:subject ?pfs233 ; rdf:predicate up:annotation ; rdf:object ?annotation234 . _:642425 a rdf:Statement ; up:attribution _:642334 ; rdf:subject ?pfs233 ; rdf:predicate up:annotation ; rdf:object ?annotation234 . _:642426 a rdf:Statement ; up:source unirule:MF_01836 ; rdf:subject ?pfs240 ; rdf:predicate up:annotation ; rdf:object ?annotation241 . _:642427 a rdf:Statement ; up:attribution _:642335 ; rdf:subject ?pfs240 ; rdf:predicate up:annotation ; rdf:object ?annotation241 . _:642428 a rdf:Statement ; up:source unirule:MF_01836 ; rdf:subject ?pfs247 ; rdf:predicate up:annotation ; rdf:object ?annotation248 . _:642429 a rdf:Statement ; up:attribution _:642336 ; rdf:subject ?pfs247 ; rdf:predicate up:annotation ; rdf:object ?annotation248 . } WHERE { #baseURI: http://purl.uniprot.org/unirule/MF_01836 #Rule MF_01836 Created by:? on:2005-02-28 Modified by:Edouard de Castro on:2024-09-02 ?this up:organism ?thisOrganism ; rdfs:seeAlso signature:MF_01836 . ?thisOrganism rdfs:subClassOf+ taxon:1117 . BIND(URI(CONCAT(STR(?this), '#MF_01836a0')) AS ?name0) . BIND(URI(CONCAT(STR(?this), '#MF_01836a2')) AS ?annotation2) . OPTIONAL { ?this up:sequence ?thisSequence . ?thisSequence rdf:value ?thisSequenceValue . ?templateMotifMatch258 faldo:location ?templateMotifSequenceMatchRegionQ79PF4259 ; edam:is_output_of ?templateMotifSequenceProfileAlignmentOperationQ79PF4261 ; rdf:type edam:data_0869 ; rdf:value ?templateMotifCigarQ79PF4MF_01836254 . ?templateMotifSequenceMatchRegionQ79PF4259 faldo:begin ?templateMotifSequenceMatchBeginQ79PF4260 . ?templateMotifSequenceMatchBeginQ79PF4260 faldo:position ?templateMotifSequenceMatchBeginPositionQ79PF4255 ; faldo:reference isoform:Q79PF4-1 . ?templateMotifSequenceProfileAlignmentOperationQ79PF4261 edam:has_input signature:MF_01836 ; rdf:type edam:operation_0300 . ?targetMotifMatch262 faldo:location ?targetMotifMatchRegionMatch263 ; edam:is_output_of ?targetMotifSequenceAlignmentOperationMF_01836265 ; rdf:type edam:data_0869 ; rdf:value ?targetMotifMatchCigarQ79PF4MF_01836256 . ?targetMotifMatchRegionMatch263 faldo:begin ?targetMotifMatchRegionMatchBeginMF_01836264 . ?targetMotifMatchRegionMatchBeginMF_01836264 faldo:position ?targetMotifMatchRegionMatchBeginPositionMF_01836257 ; faldo:reference ?thisSequence . ?targetMotifSequenceAlignmentOperationMF_01836265 edam:has_input signature:MF_01836 ; rdf:type edam:operation_0300 . BIND(?this AS ?tagphospho) . BIND(STRLEN(REPLACE(SUBSTR(?templateMotifCigarQ79PF4MF_01836254, 1, (STRLEN(?templateMotifCigarQ79PF4MF_01836254) - STRLEN(REPLACE(?templateMotifCigarQ79PF4MF_01836254, CONCAT('^(?:-*[^-]){', STR(((431 - ?templateMotifSequenceMatchBeginPositionQ79PF4255) + 1)), '}'), '')))), '[a-z]', '')) AS ?step1266) . BIND((STRLEN(SUBSTR(?targetMotifMatchCigarQ79PF4MF_01836256, 1, (STRLEN(?targetMotifMatchCigarQ79PF4MF_01836256) - STRLEN(REPLACE(?targetMotifMatchCigarQ79PF4MF_01836256, CONCAT('^(?:[a-z]*(?:[A-Z]|-)){', STR(?step1266), '}'), ''))))) - STRLEN(REPLACE(SUBSTR(?targetMotifMatchCigarQ79PF4MF_01836256, 1, (STRLEN(?targetMotifMatchCigarQ79PF4MF_01836256) - STRLEN(REPLACE(?targetMotifMatchCigarQ79PF4MF_01836256, CONCAT('^(?:[a-z]*(?:[A-Z]|-)){', STR(?step1266), '}'), '')))), '[^-]', ''))) AS ?step2267) . BIND(((?step2267 + ?targetMotifMatchRegionMatchBeginPositionMF_01836257) - 1) AS ?thisPositionOn10) . BIND(?thisPositionOn10 AS ?thisPositionOn11) . BIND(?this AS ?pfs1t268) . BIND(URI(CONCAT(STR(?thisSequence), '#position', STR(?thisPositionOn10))) AS ?pfsb8) . BIND(URI(CONCAT(STR(?thisSequence), '#position', STR(?thisPositionOn11))) AS ?pfse9) . FILTER ((SUBSTR(?thisSequenceValue, ?thisPositionOn10, 1) = 'S')) . BIND(URI(CONCAT(STR(?this), '#MF_01836a7')) AS ?annotation7) . BIND(?this AS ?pfs6) . } OPTIONAL { ?this up:sequence ?thisSequence . ?thisSequence rdf:value ?thisSequenceValue . ?templateMotifMatch273 faldo:location ?templateMotifSequenceMatchRegionQ79PF4274 ; edam:is_output_of ?templateMotifSequenceProfileAlignmentOperationQ79PF4276 ; rdf:type edam:data_0869 ; rdf:value ?templateMotifCigarQ79PF4MF_01836269 . ?templateMotifSequenceMatchRegionQ79PF4274 faldo:begin ?templateMotifSequenceMatchBeginQ79PF4275 . ?templateMotifSequenceMatchBeginQ79PF4275 faldo:position ?templateMotifSequenceMatchBeginPositionQ79PF4270 ; faldo:reference isoform:Q79PF4-1 . ?templateMotifSequenceProfileAlignmentOperationQ79PF4276 edam:has_input signature:MF_01836 ; rdf:type edam:operation_0300 . ?targetMotifMatch277 faldo:location ?targetMotifMatchRegionMatch278 ; edam:is_output_of ?targetMotifSequenceAlignmentOperationMF_01836280 ; rdf:type edam:data_0869 ; rdf:value ?targetMotifMatchCigarQ79PF4MF_01836271 . ?targetMotifMatchRegionMatch278 faldo:begin ?targetMotifMatchRegionMatchBeginMF_01836279 . ?targetMotifMatchRegionMatchBeginMF_01836279 faldo:position ?targetMotifMatchRegionMatchBeginPositionMF_01836272 ; faldo:reference ?thisSequence . ?targetMotifSequenceAlignmentOperationMF_01836280 edam:has_input signature:MF_01836 ; rdf:type edam:operation_0300 . BIND(?this AS ?tagphospho) . BIND(STRLEN(REPLACE(SUBSTR(?templateMotifCigarQ79PF4MF_01836269, 1, (STRLEN(?templateMotifCigarQ79PF4MF_01836269) - STRLEN(REPLACE(?templateMotifCigarQ79PF4MF_01836269, CONCAT('^(?:-*[^-]){', STR(((432 - ?templateMotifSequenceMatchBeginPositionQ79PF4270) + 1)), '}'), '')))), '[a-z]', '')) AS ?step1281) . BIND((STRLEN(SUBSTR(?targetMotifMatchCigarQ79PF4MF_01836271, 1, (STRLEN(?targetMotifMatchCigarQ79PF4MF_01836271) - STRLEN(REPLACE(?targetMotifMatchCigarQ79PF4MF_01836271, CONCAT('^(?:[a-z]*(?:[A-Z]|-)){', STR(?step1281), '}'), ''))))) - STRLEN(REPLACE(SUBSTR(?targetMotifMatchCigarQ79PF4MF_01836271, 1, (STRLEN(?targetMotifMatchCigarQ79PF4MF_01836271) - STRLEN(REPLACE(?targetMotifMatchCigarQ79PF4MF_01836271, CONCAT('^(?:[a-z]*(?:[A-Z]|-)){', STR(?step1281), '}'), '')))), '[^-]', ''))) AS ?step2282) . BIND(((?step2282 + ?targetMotifMatchRegionMatchBeginPositionMF_01836272) - 1) AS ?thisPositionOn16) . BIND(?thisPositionOn16 AS ?thisPositionOn17) . BIND(?this AS ?pfs1t283) . BIND(URI(CONCAT(STR(?thisSequence), '#position', STR(?thisPositionOn16))) AS ?pfsb14) . BIND(URI(CONCAT(STR(?thisSequence), '#position', STR(?thisPositionOn17))) AS ?pfse15) . FILTER ((SUBSTR(?thisSequenceValue, ?thisPositionOn16, 1) = 'T')) . BIND(URI(CONCAT(STR(?this), '#MF_01836a13')) AS ?annotation13) . BIND(?this AS ?pfs12) . } OPTIONAL { ?this up:sequence ?thisSequence . ?thisSequence rdf:value ?thisSequenceValue . ?templateMotifMatch288 faldo:location ?templateMotifSequenceMatchRegionQ79PF4289 ; edam:is_output_of ?templateMotifSequenceProfileAlignmentOperationQ79PF4291 ; rdf:type edam:data_0869 ; rdf:value ?templateMotifCigarQ79PF4MF_01836284 . ?templateMotifSequenceMatchRegionQ79PF4289 faldo:begin ?templateMotifSequenceMatchBeginQ79PF4290 . ?templateMotifSequenceMatchBeginQ79PF4290 faldo:position ?templateMotifSequenceMatchBeginPositionQ79PF4285 ; faldo:reference isoform:Q79PF4-1 . ?templateMotifSequenceProfileAlignmentOperationQ79PF4291 edam:has_input signature:MF_01836 ; rdf:type edam:operation_0300 . ?targetMotifMatch292 faldo:location ?targetMotifMatchRegionMatch293 ; edam:is_output_of ?targetMotifSequenceAlignmentOperationMF_01836295 ; rdf:type edam:data_0869 ; rdf:value ?targetMotifMatchCigarQ79PF4MF_01836286 . ?targetMotifMatchRegionMatch293 faldo:begin ?targetMotifMatchRegionMatchBeginMF_01836294 . ?targetMotifMatchRegionMatchBeginMF_01836294 faldo:position ?targetMotifMatchRegionMatchBeginPositionMF_01836287 ; faldo:reference ?thisSequence . ?targetMotifSequenceAlignmentOperationMF_01836295 edam:has_input signature:MF_01836 ; rdf:type edam:operation_0300 . BIND(STRLEN(REPLACE(SUBSTR(?templateMotifCigarQ79PF4MF_01836284, 1, (STRLEN(?templateMotifCigarQ79PF4MF_01836284) - STRLEN(REPLACE(?templateMotifCigarQ79PF4MF_01836284, CONCAT('^(?:-*[^-]){', STR(((1 - ?templateMotifSequenceMatchBeginPositionQ79PF4285) + 1)), '}'), '')))), '[a-z]', '')) AS ?step1296) . BIND((STRLEN(SUBSTR(?targetMotifMatchCigarQ79PF4MF_01836286, 1, (STRLEN(?targetMotifMatchCigarQ79PF4MF_01836286) - STRLEN(REPLACE(?targetMotifMatchCigarQ79PF4MF_01836286, CONCAT('^(?:[a-z]*(?:[A-Z]|-)){', STR(?step1296), '}'), ''))))) - STRLEN(REPLACE(SUBSTR(?targetMotifMatchCigarQ79PF4MF_01836286, 1, (STRLEN(?targetMotifMatchCigarQ79PF4MF_01836286) - STRLEN(REPLACE(?targetMotifMatchCigarQ79PF4MF_01836286, CONCAT('^(?:[a-z]*(?:[A-Z]|-)){', STR(?step1296), '}'), '')))), '[^-]', ''))) AS ?step2297) . BIND(((?step2297 + ?targetMotifMatchRegionMatchBeginPositionMF_01836287) - 1) AS ?thisPositionOn22) . BIND(STRLEN(REPLACE(SUBSTR(?templateMotifCigarQ79PF4MF_01836284, 1, (STRLEN(?templateMotifCigarQ79PF4MF_01836284) - STRLEN(REPLACE(?templateMotifCigarQ79PF4MF_01836284, CONCAT('^(?:-*[^-]){', STR(((247 - ?templateMotifSequenceMatchBeginPositionQ79PF4285) + 1)), '}'), '')))), '[a-z]', '')) AS ?step1298) . BIND((STRLEN(SUBSTR(?targetMotifMatchCigarQ79PF4MF_01836286, 1, (STRLEN(?targetMotifMatchCigarQ79PF4MF_01836286) - STRLEN(REPLACE(?targetMotifMatchCigarQ79PF4MF_01836286, CONCAT('^(?:[a-z]*(?:[A-Z]|-)){', STR(?step1298), '}'), ''))))) - STRLEN(REPLACE(SUBSTR(?targetMotifMatchCigarQ79PF4MF_01836286, 1, (STRLEN(?targetMotifMatchCigarQ79PF4MF_01836286) - STRLEN(REPLACE(?targetMotifMatchCigarQ79PF4MF_01836286, CONCAT('^(?:[a-z]*(?:[A-Z]|-)){', STR(?step1298), '}'), '')))), '[^-]', ''))) AS ?step2299) . BIND(((?step2299 + ?targetMotifMatchRegionMatchBeginPositionMF_01836287) - 1) AS ?thisPositionOn23) . BIND(?this AS ?pfs2t300) . BIND(URI(CONCAT(STR(?thisSequence), '#position', STR(?thisPositionOn22))) AS ?pfsb20) . BIND(URI(CONCAT(STR(?thisSequence), '#position', STR(?thisPositionOn23))) AS ?pfse21) . FILTER ((BOUND(?thisPositionOn22) && BOUND(?thisPositionOn23))) . BIND(URI(CONCAT(STR(?this), '#MF_01836a19')) AS ?annotation19) . BIND(?this AS ?pfs18) . } OPTIONAL { ?this up:sequence ?thisSequence . ?thisSequence rdf:value ?thisSequenceValue . ?templateMotifMatch305 faldo:location ?templateMotifSequenceMatchRegionQ79PF4306 ; edam:is_output_of ?templateMotifSequenceProfileAlignmentOperationQ79PF4308 ; rdf:type edam:data_0869 ; rdf:value ?templateMotifCigarQ79PF4MF_01836301 . ?templateMotifSequenceMatchRegionQ79PF4306 faldo:begin ?templateMotifSequenceMatchBeginQ79PF4307 . ?templateMotifSequenceMatchBeginQ79PF4307 faldo:position ?templateMotifSequenceMatchBeginPositionQ79PF4302 ; faldo:reference isoform:Q79PF4-1 . ?templateMotifSequenceProfileAlignmentOperationQ79PF4308 edam:has_input signature:MF_01836 ; rdf:type edam:operation_0300 . ?targetMotifMatch309 faldo:location ?targetMotifMatchRegionMatch310 ; edam:is_output_of ?targetMotifSequenceAlignmentOperationMF_01836312 ; rdf:type edam:data_0869 ; rdf:value ?targetMotifMatchCigarQ79PF4MF_01836303 . ?targetMotifMatchRegionMatch310 faldo:begin ?targetMotifMatchRegionMatchBeginMF_01836311 . ?targetMotifMatchRegionMatchBeginMF_01836311 faldo:position ?targetMotifMatchRegionMatchBeginPositionMF_01836304 ; faldo:reference ?thisSequence . ?targetMotifSequenceAlignmentOperationMF_01836312 edam:has_input signature:MF_01836 ; rdf:type edam:operation_0300 . BIND(STRLEN(REPLACE(SUBSTR(?templateMotifCigarQ79PF4MF_01836301, 1, (STRLEN(?templateMotifCigarQ79PF4MF_01836301) - STRLEN(REPLACE(?templateMotifCigarQ79PF4MF_01836301, CONCAT('^(?:-*[^-]){', STR(((261 - ?templateMotifSequenceMatchBeginPositionQ79PF4302) + 1)), '}'), '')))), '[a-z]', '')) AS ?step1313) . BIND((STRLEN(SUBSTR(?targetMotifMatchCigarQ79PF4MF_01836303, 1, (STRLEN(?targetMotifMatchCigarQ79PF4MF_01836303) - STRLEN(REPLACE(?targetMotifMatchCigarQ79PF4MF_01836303, CONCAT('^(?:[a-z]*(?:[A-Z]|-)){', STR(?step1313), '}'), ''))))) - STRLEN(REPLACE(SUBSTR(?targetMotifMatchCigarQ79PF4MF_01836303, 1, (STRLEN(?targetMotifMatchCigarQ79PF4MF_01836303) - STRLEN(REPLACE(?targetMotifMatchCigarQ79PF4MF_01836303, CONCAT('^(?:[a-z]*(?:[A-Z]|-)){', STR(?step1313), '}'), '')))), '[^-]', ''))) AS ?step2314) . BIND(((?step2314 + ?targetMotifMatchRegionMatchBeginPositionMF_01836304) - 1) AS ?thisPositionOn28) . BIND(STRLEN(?thisSequenceValue) AS ?thisPositionOn29) . BIND(?this AS ?pfs2t315) . BIND(URI(CONCAT(STR(?thisSequence), '#position', STR(?thisPositionOn28))) AS ?pfsb26) . BIND(URI(CONCAT(STR(?thisSequence), '#position', STR(?thisPositionOn29))) AS ?pfse27) . FILTER ((BOUND(?thisPositionOn28) && BOUND(?thisPositionOn29))) . BIND(URI(CONCAT(STR(?this), '#MF_01836a25')) AS ?annotation25) . BIND(?this AS ?pfs24) . } OPTIONAL { ?this up:sequence ?thisSequence . ?thisSequence rdf:value ?thisSequenceValue . ?templateMotifMatch320 faldo:location ?templateMotifSequenceMatchRegionQ79PF4321 ; edam:is_output_of ?templateMotifSequenceProfileAlignmentOperationQ79PF4323 ; rdf:type edam:data_0869 ; rdf:value ?templateMotifCigarQ79PF4MF_01836316 . ?templateMotifSequenceMatchRegionQ79PF4321 faldo:begin ?templateMotifSequenceMatchBeginQ79PF4322 . ?templateMotifSequenceMatchBeginQ79PF4322 faldo:position ?templateMotifSequenceMatchBeginPositionQ79PF4317 ; faldo:reference isoform:Q79PF4-1 . ?templateMotifSequenceProfileAlignmentOperationQ79PF4323 edam:has_input signature:MF_01836 ; rdf:type edam:operation_0300 . ?targetMotifMatch324 faldo:location ?targetMotifMatchRegionMatch325 ; edam:is_output_of ?targetMotifSequenceAlignmentOperationMF_01836327 ; rdf:type edam:data_0869 ; rdf:value ?targetMotifMatchCigarQ79PF4MF_01836318 . ?targetMotifMatchRegionMatch325 faldo:begin ?targetMotifMatchRegionMatchBeginMF_01836326 . ?targetMotifMatchRegionMatchBeginMF_01836326 faldo:position ?targetMotifMatchRegionMatchBeginPositionMF_01836319 ; faldo:reference ?thisSequence . ?targetMotifSequenceAlignmentOperationMF_01836327 edam:has_input signature:MF_01836 ; rdf:type edam:operation_0300 . BIND(STRLEN(REPLACE(SUBSTR(?templateMotifCigarQ79PF4MF_01836316, 1, (STRLEN(?templateMotifCigarQ79PF4MF_01836316) - STRLEN(REPLACE(?templateMotifCigarQ79PF4MF_01836316, CONCAT('^(?:-*[^-]){', STR(((49 - ?templateMotifSequenceMatchBeginPositionQ79PF4317) + 1)), '}'), '')))), '[a-z]', '')) AS ?step1328) . BIND((STRLEN(SUBSTR(?targetMotifMatchCigarQ79PF4MF_01836318, 1, (STRLEN(?targetMotifMatchCigarQ79PF4MF_01836318) - STRLEN(REPLACE(?targetMotifMatchCigarQ79PF4MF_01836318, CONCAT('^(?:[a-z]*(?:[A-Z]|-)){', STR(?step1328), '}'), ''))))) - STRLEN(REPLACE(SUBSTR(?targetMotifMatchCigarQ79PF4MF_01836318, 1, (STRLEN(?targetMotifMatchCigarQ79PF4MF_01836318) - STRLEN(REPLACE(?targetMotifMatchCigarQ79PF4MF_01836318, CONCAT('^(?:[a-z]*(?:[A-Z]|-)){', STR(?step1328), '}'), '')))), '[^-]', ''))) AS ?step2329) . BIND(((?step2329 + ?targetMotifMatchRegionMatchBeginPositionMF_01836319) - 1) AS ?thisPositionOn35) . BIND(?thisPositionOn35 AS ?thisPositionOn36) . BIND(?this AS ?pfs2t330) . BIND(URI(CONCAT(STR(?thisSequence), '#position', STR(?thisPositionOn35))) AS ?pfsb32) . BIND(URI(CONCAT(STR(?thisSequence), '#position', STR(?thisPositionOn36))) AS ?pfse33) . FILTER ((SUBSTR(?thisSequenceValue, ?thisPositionOn35, 1) = 'G')) . BIND(URI(CONCAT(STR(?this), '#MF_01836a31')) AS ?annotation31) . BIND(?this AS ?pfs30) . } OPTIONAL { ?this up:sequence ?thisSequence . ?thisSequence rdf:value ?thisSequenceValue . ?templateMotifMatch335 faldo:location ?templateMotifSequenceMatchRegionQ79PF4336 ; edam:is_output_of ?templateMotifSequenceProfileAlignmentOperationQ79PF4338 ; rdf:type edam:data_0869 ; rdf:value ?templateMotifCigarQ79PF4MF_01836331 . ?templateMotifSequenceMatchRegionQ79PF4336 faldo:begin ?templateMotifSequenceMatchBeginQ79PF4337 . ?templateMotifSequenceMatchBeginQ79PF4337 faldo:position ?templateMotifSequenceMatchBeginPositionQ79PF4332 ; faldo:reference isoform:Q79PF4-1 . ?templateMotifSequenceProfileAlignmentOperationQ79PF4338 edam:has_input signature:MF_01836 ; rdf:type edam:operation_0300 . ?targetMotifMatch339 faldo:location ?targetMotifMatchRegionMatch340 ; edam:is_output_of ?targetMotifSequenceAlignmentOperationMF_01836342 ; rdf:type edam:data_0869 ; rdf:value ?targetMotifMatchCigarQ79PF4MF_01836333 . ?targetMotifMatchRegionMatch340 faldo:begin ?targetMotifMatchRegionMatchBeginMF_01836341 . ?targetMotifMatchRegionMatchBeginMF_01836341 faldo:position ?targetMotifMatchRegionMatchBeginPositionMF_01836334 ; faldo:reference ?thisSequence . ?targetMotifSequenceAlignmentOperationMF_01836342 edam:has_input signature:MF_01836 ; rdf:type edam:operation_0300 . BIND(STRLEN(REPLACE(SUBSTR(?templateMotifCigarQ79PF4MF_01836331, 1, (STRLEN(?templateMotifCigarQ79PF4MF_01836331) - STRLEN(REPLACE(?templateMotifCigarQ79PF4MF_01836331, CONCAT('^(?:-*[^-]){', STR(((50 - ?templateMotifSequenceMatchBeginPositionQ79PF4332) + 1)), '}'), '')))), '[a-z]', '')) AS ?step1343) . BIND((STRLEN(SUBSTR(?targetMotifMatchCigarQ79PF4MF_01836333, 1, (STRLEN(?targetMotifMatchCigarQ79PF4MF_01836333) - STRLEN(REPLACE(?targetMotifMatchCigarQ79PF4MF_01836333, CONCAT('^(?:[a-z]*(?:[A-Z]|-)){', STR(?step1343), '}'), ''))))) - STRLEN(REPLACE(SUBSTR(?targetMotifMatchCigarQ79PF4MF_01836333, 1, (STRLEN(?targetMotifMatchCigarQ79PF4MF_01836333) - STRLEN(REPLACE(?targetMotifMatchCigarQ79PF4MF_01836333, CONCAT('^(?:[a-z]*(?:[A-Z]|-)){', STR(?step1343), '}'), '')))), '[^-]', ''))) AS ?step2344) . BIND(((?step2344 + ?targetMotifMatchRegionMatchBeginPositionMF_01836334) - 1) AS ?thisPositionOn42) . BIND(?thisPositionOn42 AS ?thisPositionOn43) . BIND(?this AS ?pfs2t345) . BIND(URI(CONCAT(STR(?thisSequence), '#position', STR(?thisPositionOn42))) AS ?pfsb39) . BIND(URI(CONCAT(STR(?thisSequence), '#position', STR(?thisPositionOn43))) AS ?pfse40) . FILTER ((SUBSTR(?thisSequenceValue, ?thisPositionOn42, 1) = 'T')) . BIND(URI(CONCAT(STR(?this), '#MF_01836a38')) AS ?annotation38) . BIND(?this AS ?pfs37) . } OPTIONAL { ?this up:sequence ?thisSequence . ?thisSequence rdf:value ?thisSequenceValue . ?templateMotifMatch350 faldo:location ?templateMotifSequenceMatchRegionQ79PF4351 ; edam:is_output_of ?templateMotifSequenceProfileAlignmentOperationQ79PF4353 ; rdf:type edam:data_0869 ; rdf:value ?templateMotifCigarQ79PF4MF_01836346 . ?templateMotifSequenceMatchRegionQ79PF4351 faldo:begin ?templateMotifSequenceMatchBeginQ79PF4352 . ?templateMotifSequenceMatchBeginQ79PF4352 faldo:position ?templateMotifSequenceMatchBeginPositionQ79PF4347 ; faldo:reference isoform:Q79PF4-1 . ?templateMotifSequenceProfileAlignmentOperationQ79PF4353 edam:has_input signature:MF_01836 ; rdf:type edam:operation_0300 . ?targetMotifMatch354 faldo:location ?targetMotifMatchRegionMatch355 ; edam:is_output_of ?targetMotifSequenceAlignmentOperationMF_01836357 ; rdf:type edam:data_0869 ; rdf:value ?targetMotifMatchCigarQ79PF4MF_01836348 . ?targetMotifMatchRegionMatch355 faldo:begin ?targetMotifMatchRegionMatchBeginMF_01836356 . ?targetMotifMatchRegionMatchBeginMF_01836356 faldo:position ?targetMotifMatchRegionMatchBeginPositionMF_01836349 ; faldo:reference ?thisSequence . ?targetMotifSequenceAlignmentOperationMF_01836357 edam:has_input signature:MF_01836 ; rdf:type edam:operation_0300 . BIND(STRLEN(REPLACE(SUBSTR(?templateMotifCigarQ79PF4MF_01836346, 1, (STRLEN(?templateMotifCigarQ79PF4MF_01836346) - STRLEN(REPLACE(?templateMotifCigarQ79PF4MF_01836346, CONCAT('^(?:-*[^-]){', STR(((51 - ?templateMotifSequenceMatchBeginPositionQ79PF4347) + 1)), '}'), '')))), '[a-z]', '')) AS ?step1358) . BIND((STRLEN(SUBSTR(?targetMotifMatchCigarQ79PF4MF_01836348, 1, (STRLEN(?targetMotifMatchCigarQ79PF4MF_01836348) - STRLEN(REPLACE(?targetMotifMatchCigarQ79PF4MF_01836348, CONCAT('^(?:[a-z]*(?:[A-Z]|-)){', STR(?step1358), '}'), ''))))) - STRLEN(REPLACE(SUBSTR(?targetMotifMatchCigarQ79PF4MF_01836348, 1, (STRLEN(?targetMotifMatchCigarQ79PF4MF_01836348) - STRLEN(REPLACE(?targetMotifMatchCigarQ79PF4MF_01836348, CONCAT('^(?:[a-z]*(?:[A-Z]|-)){', STR(?step1358), '}'), '')))), '[^-]', ''))) AS ?step2359) . BIND(((?step2359 + ?targetMotifMatchRegionMatchBeginPositionMF_01836349) - 1) AS ?thisPositionOn49) . BIND(?thisPositionOn49 AS ?thisPositionOn50) . BIND(?this AS ?pfs2t360) . BIND(URI(CONCAT(STR(?thisSequence), '#position', STR(?thisPositionOn49))) AS ?pfsb46) . BIND(URI(CONCAT(STR(?thisSequence), '#position', STR(?thisPositionOn50))) AS ?pfse47) . FILTER ((SUBSTR(?thisSequenceValue, ?thisPositionOn49, 1) = 'G')) . BIND(URI(CONCAT(STR(?this), '#MF_01836a45')) AS ?annotation45) . BIND(?this AS ?pfs44) . } OPTIONAL { ?this up:sequence ?thisSequence . ?thisSequence rdf:value ?thisSequenceValue . ?templateMotifMatch365 faldo:location ?templateMotifSequenceMatchRegionQ79PF4366 ; edam:is_output_of ?templateMotifSequenceProfileAlignmentOperationQ79PF4368 ; rdf:type edam:data_0869 ; rdf:value ?templateMotifCigarQ79PF4MF_01836361 . ?templateMotifSequenceMatchRegionQ79PF4366 faldo:begin ?templateMotifSequenceMatchBeginQ79PF4367 . ?templateMotifSequenceMatchBeginQ79PF4367 faldo:position ?templateMotifSequenceMatchBeginPositionQ79PF4362 ; faldo:reference isoform:Q79PF4-1 . ?templateMotifSequenceProfileAlignmentOperationQ79PF4368 edam:has_input signature:MF_01836 ; rdf:type edam:operation_0300 . ?targetMotifMatch369 faldo:location ?targetMotifMatchRegionMatch370 ; edam:is_output_of ?targetMotifSequenceAlignmentOperationMF_01836372 ; rdf:type edam:data_0869 ; rdf:value ?targetMotifMatchCigarQ79PF4MF_01836363 . ?targetMotifMatchRegionMatch370 faldo:begin ?targetMotifMatchRegionMatchBeginMF_01836371 . ?targetMotifMatchRegionMatchBeginMF_01836371 faldo:position ?targetMotifMatchRegionMatchBeginPositionMF_01836364 ; faldo:reference ?thisSequence . ?targetMotifSequenceAlignmentOperationMF_01836372 edam:has_input signature:MF_01836 ; rdf:type edam:operation_0300 . BIND(STRLEN(REPLACE(SUBSTR(?templateMotifCigarQ79PF4MF_01836361, 1, (STRLEN(?templateMotifCigarQ79PF4MF_01836361) - STRLEN(REPLACE(?templateMotifCigarQ79PF4MF_01836361, CONCAT('^(?:-*[^-]){', STR(((52 - ?templateMotifSequenceMatchBeginPositionQ79PF4362) + 1)), '}'), '')))), '[a-z]', '')) AS ?step1373) . BIND((STRLEN(SUBSTR(?targetMotifMatchCigarQ79PF4MF_01836363, 1, (STRLEN(?targetMotifMatchCigarQ79PF4MF_01836363) - STRLEN(REPLACE(?targetMotifMatchCigarQ79PF4MF_01836363, CONCAT('^(?:[a-z]*(?:[A-Z]|-)){', STR(?step1373), '}'), ''))))) - STRLEN(REPLACE(SUBSTR(?targetMotifMatchCigarQ79PF4MF_01836363, 1, (STRLEN(?targetMotifMatchCigarQ79PF4MF_01836363) - STRLEN(REPLACE(?targetMotifMatchCigarQ79PF4MF_01836363, CONCAT('^(?:[a-z]*(?:[A-Z]|-)){', STR(?step1373), '}'), '')))), '[^-]', ''))) AS ?step2374) . BIND(((?step2374 + ?targetMotifMatchRegionMatchBeginPositionMF_01836364) - 1) AS ?thisPositionOn56) . BIND(?thisPositionOn56 AS ?thisPositionOn57) . BIND(?this AS ?pfs2t375) . BIND(URI(CONCAT(STR(?thisSequence), '#position', STR(?thisPositionOn56))) AS ?pfsb53) . BIND(URI(CONCAT(STR(?thisSequence), '#position', STR(?thisPositionOn57))) AS ?pfse54) . FILTER ((SUBSTR(?thisSequenceValue, ?thisPositionOn56, 1) = 'K')) . BIND(URI(CONCAT(STR(?this), '#MF_01836a52')) AS ?annotation52) . BIND(?this AS ?pfs51) . } OPTIONAL { ?this up:sequence ?thisSequence . ?thisSequence rdf:value ?thisSequenceValue . ?templateMotifMatch380 faldo:location ?templateMotifSequenceMatchRegionQ79PF4381 ; edam:is_output_of ?templateMotifSequenceProfileAlignmentOperationQ79PF4383 ; rdf:type edam:data_0869 ; rdf:value ?templateMotifCigarQ79PF4MF_01836376 . ?templateMotifSequenceMatchRegionQ79PF4381 faldo:begin ?templateMotifSequenceMatchBeginQ79PF4382 . ?templateMotifSequenceMatchBeginQ79PF4382 faldo:position ?templateMotifSequenceMatchBeginPositionQ79PF4377 ; faldo:reference isoform:Q79PF4-1 . ?templateMotifSequenceProfileAlignmentOperationQ79PF4383 edam:has_input signature:MF_01836 ; rdf:type edam:operation_0300 . ?targetMotifMatch384 faldo:location ?targetMotifMatchRegionMatch385 ; edam:is_output_of ?targetMotifSequenceAlignmentOperationMF_01836387 ; rdf:type edam:data_0869 ; rdf:value ?targetMotifMatchCigarQ79PF4MF_01836378 . ?targetMotifMatchRegionMatch385 faldo:begin ?targetMotifMatchRegionMatchBeginMF_01836386 . ?targetMotifMatchRegionMatchBeginMF_01836386 faldo:position ?targetMotifMatchRegionMatchBeginPositionMF_01836379 ; faldo:reference ?thisSequence . ?targetMotifSequenceAlignmentOperationMF_01836387 edam:has_input signature:MF_01836 ; rdf:type edam:operation_0300 . BIND(STRLEN(REPLACE(SUBSTR(?templateMotifCigarQ79PF4MF_01836376, 1, (STRLEN(?templateMotifCigarQ79PF4MF_01836376) - STRLEN(REPLACE(?templateMotifCigarQ79PF4MF_01836376, CONCAT('^(?:-*[^-]){', STR(((53 - ?templateMotifSequenceMatchBeginPositionQ79PF4377) + 1)), '}'), '')))), '[a-z]', '')) AS ?step1388) . BIND((STRLEN(SUBSTR(?targetMotifMatchCigarQ79PF4MF_01836378, 1, (STRLEN(?targetMotifMatchCigarQ79PF4MF_01836378) - STRLEN(REPLACE(?targetMotifMatchCigarQ79PF4MF_01836378, CONCAT('^(?:[a-z]*(?:[A-Z]|-)){', STR(?step1388), '}'), ''))))) - STRLEN(REPLACE(SUBSTR(?targetMotifMatchCigarQ79PF4MF_01836378, 1, (STRLEN(?targetMotifMatchCigarQ79PF4MF_01836378) - STRLEN(REPLACE(?targetMotifMatchCigarQ79PF4MF_01836378, CONCAT('^(?:[a-z]*(?:[A-Z]|-)){', STR(?step1388), '}'), '')))), '[^-]', ''))) AS ?step2389) . BIND(((?step2389 + ?targetMotifMatchRegionMatchBeginPositionMF_01836379) - 1) AS ?thisPositionOn63) . BIND(?thisPositionOn63 AS ?thisPositionOn64) . BIND(?this AS ?pfs2t390) . BIND(URI(CONCAT(STR(?thisSequence), '#position', STR(?thisPositionOn63))) AS ?pfsb60) . BIND(URI(CONCAT(STR(?thisSequence), '#position', STR(?thisPositionOn64))) AS ?pfse61) . FILTER ((SUBSTR(?thisSequenceValue, ?thisPositionOn63, 1) = 'T')) . BIND(URI(CONCAT(STR(?this), '#MF_01836a59')) AS ?annotation59) . BIND(?this AS ?pfs58) . } OPTIONAL { ?this up:sequence ?thisSequence . ?thisSequence rdf:value ?thisSequenceValue . ?templateMotifMatch395 faldo:location ?templateMotifSequenceMatchRegionQ79PF4396 ; edam:is_output_of ?templateMotifSequenceProfileAlignmentOperationQ79PF4398 ; rdf:type edam:data_0869 ; rdf:value ?templateMotifCigarQ79PF4MF_01836391 . ?templateMotifSequenceMatchRegionQ79PF4396 faldo:begin ?templateMotifSequenceMatchBeginQ79PF4397 . ?templateMotifSequenceMatchBeginQ79PF4397 faldo:position ?templateMotifSequenceMatchBeginPositionQ79PF4392 ; faldo:reference isoform:Q79PF4-1 . ?templateMotifSequenceProfileAlignmentOperationQ79PF4398 edam:has_input signature:MF_01836 ; rdf:type edam:operation_0300 . ?targetMotifMatch399 faldo:location ?targetMotifMatchRegionMatch400 ; edam:is_output_of ?targetMotifSequenceAlignmentOperationMF_01836402 ; rdf:type edam:data_0869 ; rdf:value ?targetMotifMatchCigarQ79PF4MF_01836393 . ?targetMotifMatchRegionMatch400 faldo:begin ?targetMotifMatchRegionMatchBeginMF_01836401 . ?targetMotifMatchRegionMatchBeginMF_01836401 faldo:position ?targetMotifMatchRegionMatchBeginPositionMF_01836394 ; faldo:reference ?thisSequence . ?targetMotifSequenceAlignmentOperationMF_01836402 edam:has_input signature:MF_01836 ; rdf:type edam:operation_0300 . BIND(STRLEN(REPLACE(SUBSTR(?templateMotifCigarQ79PF4MF_01836391, 1, (STRLEN(?templateMotifCigarQ79PF4MF_01836391) - STRLEN(REPLACE(?templateMotifCigarQ79PF4MF_01836391, CONCAT('^(?:-*[^-]){', STR(((53 - ?templateMotifSequenceMatchBeginPositionQ79PF4392) + 1)), '}'), '')))), '[a-z]', '')) AS ?step1403) . BIND((STRLEN(SUBSTR(?targetMotifMatchCigarQ79PF4MF_01836393, 1, (STRLEN(?targetMotifMatchCigarQ79PF4MF_01836393) - STRLEN(REPLACE(?targetMotifMatchCigarQ79PF4MF_01836393, CONCAT('^(?:[a-z]*(?:[A-Z]|-)){', STR(?step1403), '}'), ''))))) - STRLEN(REPLACE(SUBSTR(?targetMotifMatchCigarQ79PF4MF_01836393, 1, (STRLEN(?targetMotifMatchCigarQ79PF4MF_01836393) - STRLEN(REPLACE(?targetMotifMatchCigarQ79PF4MF_01836393, CONCAT('^(?:[a-z]*(?:[A-Z]|-)){', STR(?step1403), '}'), '')))), '[^-]', ''))) AS ?step2404) . BIND(((?step2404 + ?targetMotifMatchRegionMatchBeginPositionMF_01836394) - 1) AS ?thisPositionOn70) . BIND(?thisPositionOn70 AS ?thisPositionOn71) . BIND(?this AS ?pfs2t405) . BIND(URI(CONCAT(STR(?thisSequence), '#position', STR(?thisPositionOn70))) AS ?pfsb67) . BIND(URI(CONCAT(STR(?thisSequence), '#position', STR(?thisPositionOn71))) AS ?pfse68) . FILTER ((SUBSTR(?thisSequenceValue, ?thisPositionOn70, 1) = 'T')) . BIND(URI(CONCAT(STR(?this), '#MF_01836a66')) AS ?annotation66) . BIND(?this AS ?pfs65) . } OPTIONAL { ?this up:sequence ?thisSequence . ?thisSequence rdf:value ?thisSequenceValue . ?templateMotifMatch410 faldo:location ?templateMotifSequenceMatchRegionQ79PF4411 ; edam:is_output_of ?templateMotifSequenceProfileAlignmentOperationQ79PF4413 ; rdf:type edam:data_0869 ; rdf:value ?templateMotifCigarQ79PF4MF_01836406 . ?templateMotifSequenceMatchRegionQ79PF4411 faldo:begin ?templateMotifSequenceMatchBeginQ79PF4412 . ?templateMotifSequenceMatchBeginQ79PF4412 faldo:position ?templateMotifSequenceMatchBeginPositionQ79PF4407 ; faldo:reference isoform:Q79PF4-1 . ?templateMotifSequenceProfileAlignmentOperationQ79PF4413 edam:has_input signature:MF_01836 ; rdf:type edam:operation_0300 . ?targetMotifMatch414 faldo:location ?targetMotifMatchRegionMatch415 ; edam:is_output_of ?targetMotifSequenceAlignmentOperationMF_01836417 ; rdf:type edam:data_0869 ; rdf:value ?targetMotifMatchCigarQ79PF4MF_01836408 . ?targetMotifMatchRegionMatch415 faldo:begin ?targetMotifMatchRegionMatchBeginMF_01836416 . ?targetMotifMatchRegionMatchBeginMF_01836416 faldo:position ?targetMotifMatchRegionMatchBeginPositionMF_01836409 ; faldo:reference ?thisSequence . ?targetMotifSequenceAlignmentOperationMF_01836417 edam:has_input signature:MF_01836 ; rdf:type edam:operation_0300 . BIND(STRLEN(REPLACE(SUBSTR(?templateMotifCigarQ79PF4MF_01836406, 1, (STRLEN(?templateMotifCigarQ79PF4MF_01836406) - STRLEN(REPLACE(?templateMotifCigarQ79PF4MF_01836406, CONCAT('^(?:-*[^-]){', STR(((54 - ?templateMotifSequenceMatchBeginPositionQ79PF4407) + 1)), '}'), '')))), '[a-z]', '')) AS ?step1418) . BIND((STRLEN(SUBSTR(?targetMotifMatchCigarQ79PF4MF_01836408, 1, (STRLEN(?targetMotifMatchCigarQ79PF4MF_01836408) - STRLEN(REPLACE(?targetMotifMatchCigarQ79PF4MF_01836408, CONCAT('^(?:[a-z]*(?:[A-Z]|-)){', STR(?step1418), '}'), ''))))) - STRLEN(REPLACE(SUBSTR(?targetMotifMatchCigarQ79PF4MF_01836408, 1, (STRLEN(?targetMotifMatchCigarQ79PF4MF_01836408) - STRLEN(REPLACE(?targetMotifMatchCigarQ79PF4MF_01836408, CONCAT('^(?:[a-z]*(?:[A-Z]|-)){', STR(?step1418), '}'), '')))), '[^-]', ''))) AS ?step2419) . BIND(((?step2419 + ?targetMotifMatchRegionMatchBeginPositionMF_01836409) - 1) AS ?thisPositionOn77) . BIND(?thisPositionOn77 AS ?thisPositionOn78) . BIND(?this AS ?pfs2t420) . BIND(URI(CONCAT(STR(?thisSequence), '#position', STR(?thisPositionOn77))) AS ?pfsb74) . BIND(URI(CONCAT(STR(?thisSequence), '#position', STR(?thisPositionOn78))) AS ?pfse75) . FILTER ((SUBSTR(?thisSequenceValue, ?thisPositionOn77, 1) = 'L')) . BIND(URI(CONCAT(STR(?this), '#MF_01836a73')) AS ?annotation73) . BIND(?this AS ?pfs72) . } OPTIONAL { ?this up:sequence ?thisSequence . ?thisSequence rdf:value ?thisSequenceValue . ?templateMotifMatch425 faldo:location ?templateMotifSequenceMatchRegionQ79PF4426 ; edam:is_output_of ?templateMotifSequenceProfileAlignmentOperationQ79PF4428 ; rdf:type edam:data_0869 ; rdf:value ?templateMotifCigarQ79PF4MF_01836421 . ?templateMotifSequenceMatchRegionQ79PF4426 faldo:begin ?templateMotifSequenceMatchBeginQ79PF4427 . ?templateMotifSequenceMatchBeginQ79PF4427 faldo:position ?templateMotifSequenceMatchBeginPositionQ79PF4422 ; faldo:reference isoform:Q79PF4-1 . ?templateMotifSequenceProfileAlignmentOperationQ79PF4428 edam:has_input signature:MF_01836 ; rdf:type edam:operation_0300 . ?targetMotifMatch429 faldo:location ?targetMotifMatchRegionMatch430 ; edam:is_output_of ?targetMotifSequenceAlignmentOperationMF_01836432 ; rdf:type edam:data_0869 ; rdf:value ?targetMotifMatchCigarQ79PF4MF_01836423 . ?targetMotifMatchRegionMatch430 faldo:begin ?targetMotifMatchRegionMatchBeginMF_01836431 . ?targetMotifMatchRegionMatchBeginMF_01836431 faldo:position ?targetMotifMatchRegionMatchBeginPositionMF_01836424 ; faldo:reference ?thisSequence . ?targetMotifSequenceAlignmentOperationMF_01836432 edam:has_input signature:MF_01836 ; rdf:type edam:operation_0300 . BIND(STRLEN(REPLACE(SUBSTR(?templateMotifCigarQ79PF4MF_01836421, 1, (STRLEN(?templateMotifCigarQ79PF4MF_01836421) - STRLEN(REPLACE(?templateMotifCigarQ79PF4MF_01836421, CONCAT('^(?:-*[^-]){', STR(((89 - ?templateMotifSequenceMatchBeginPositionQ79PF4422) + 1)), '}'), '')))), '[a-z]', '')) AS ?step1433) . BIND((STRLEN(SUBSTR(?targetMotifMatchCigarQ79PF4MF_01836423, 1, (STRLEN(?targetMotifMatchCigarQ79PF4MF_01836423) - STRLEN(REPLACE(?targetMotifMatchCigarQ79PF4MF_01836423, CONCAT('^(?:[a-z]*(?:[A-Z]|-)){', STR(?step1433), '}'), ''))))) - STRLEN(REPLACE(SUBSTR(?targetMotifMatchCigarQ79PF4MF_01836423, 1, (STRLEN(?targetMotifMatchCigarQ79PF4MF_01836423) - STRLEN(REPLACE(?targetMotifMatchCigarQ79PF4MF_01836423, CONCAT('^(?:[a-z]*(?:[A-Z]|-)){', STR(?step1433), '}'), '')))), '[^-]', ''))) AS ?step2434) . BIND(((?step2434 + ?targetMotifMatchRegionMatchBeginPositionMF_01836424) - 1) AS ?thisPositionOn84) . BIND(?thisPositionOn84 AS ?thisPositionOn85) . BIND(?this AS ?pfs2t435) . BIND(URI(CONCAT(STR(?thisSequence), '#position', STR(?thisPositionOn84))) AS ?pfsb81) . BIND(URI(CONCAT(STR(?thisSequence), '#position', STR(?thisPositionOn85))) AS ?pfse82) . FILTER ((SUBSTR(?thisSequenceValue, ?thisPositionOn84, 1) = 'S')) . BIND(URI(CONCAT(STR(?this), '#MF_01836a80')) AS ?annotation80) . BIND(?this AS ?pfs79) . } OPTIONAL { ?this up:sequence ?thisSequence . ?thisSequence rdf:value ?thisSequenceValue . ?templateMotifMatch440 faldo:location ?templateMotifSequenceMatchRegionQ79PF4441 ; edam:is_output_of ?templateMotifSequenceProfileAlignmentOperationQ79PF4443 ; rdf:type edam:data_0869 ; rdf:value ?templateMotifCigarQ79PF4MF_01836436 . ?templateMotifSequenceMatchRegionQ79PF4441 faldo:begin ?templateMotifSequenceMatchBeginQ79PF4442 . ?templateMotifSequenceMatchBeginQ79PF4442 faldo:position ?templateMotifSequenceMatchBeginPositionQ79PF4437 ; faldo:reference isoform:Q79PF4-1 . ?templateMotifSequenceProfileAlignmentOperationQ79PF4443 edam:has_input signature:MF_01836 ; rdf:type edam:operation_0300 . ?targetMotifMatch444 faldo:location ?targetMotifMatchRegionMatch445 ; edam:is_output_of ?targetMotifSequenceAlignmentOperationMF_01836447 ; rdf:type edam:data_0869 ; rdf:value ?targetMotifMatchCigarQ79PF4MF_01836438 . ?targetMotifMatchRegionMatch445 faldo:begin ?targetMotifMatchRegionMatchBeginMF_01836446 . ?targetMotifMatchRegionMatchBeginMF_01836446 faldo:position ?targetMotifMatchRegionMatchBeginPositionMF_01836439 ; faldo:reference ?thisSequence . ?targetMotifSequenceAlignmentOperationMF_01836447 edam:has_input signature:MF_01836 ; rdf:type edam:operation_0300 . BIND(STRLEN(REPLACE(SUBSTR(?templateMotifCigarQ79PF4MF_01836436, 1, (STRLEN(?templateMotifCigarQ79PF4MF_01836436) - STRLEN(REPLACE(?templateMotifCigarQ79PF4MF_01836436, CONCAT('^(?:-*[^-]){', STR(((224 - ?templateMotifSequenceMatchBeginPositionQ79PF4437) + 1)), '}'), '')))), '[a-z]', '')) AS ?step1448) . BIND((STRLEN(SUBSTR(?targetMotifMatchCigarQ79PF4MF_01836438, 1, (STRLEN(?targetMotifMatchCigarQ79PF4MF_01836438) - STRLEN(REPLACE(?targetMotifMatchCigarQ79PF4MF_01836438, CONCAT('^(?:[a-z]*(?:[A-Z]|-)){', STR(?step1448), '}'), ''))))) - STRLEN(REPLACE(SUBSTR(?targetMotifMatchCigarQ79PF4MF_01836438, 1, (STRLEN(?targetMotifMatchCigarQ79PF4MF_01836438) - STRLEN(REPLACE(?targetMotifMatchCigarQ79PF4MF_01836438, CONCAT('^(?:[a-z]*(?:[A-Z]|-)){', STR(?step1448), '}'), '')))), '[^-]', ''))) AS ?step2449) . BIND(((?step2449 + ?targetMotifMatchRegionMatchBeginPositionMF_01836439) - 1) AS ?thisPositionOn91) . BIND(?thisPositionOn91 AS ?thisPositionOn92) . BIND(?this AS ?pfs2t450) . BIND(URI(CONCAT(STR(?thisSequence), '#position', STR(?thisPositionOn91))) AS ?pfsb88) . BIND(URI(CONCAT(STR(?thisSequence), '#position', STR(?thisPositionOn92))) AS ?pfse89) . FILTER ((SUBSTR(?thisSequenceValue, ?thisPositionOn91, 1) = 'K')) . BIND(URI(CONCAT(STR(?this), '#MF_01836a87')) AS ?annotation87) . BIND(?this AS ?pfs86) . } OPTIONAL { ?this up:sequence ?thisSequence . ?thisSequence rdf:value ?thisSequenceValue . ?templateMotifMatch455 faldo:location ?templateMotifSequenceMatchRegionQ79PF4456 ; edam:is_output_of ?templateMotifSequenceProfileAlignmentOperationQ79PF4458 ; rdf:type edam:data_0869 ; rdf:value ?templateMotifCigarQ79PF4MF_01836451 . ?templateMotifSequenceMatchRegionQ79PF4456 faldo:begin ?templateMotifSequenceMatchBeginQ79PF4457 . ?templateMotifSequenceMatchBeginQ79PF4457 faldo:position ?templateMotifSequenceMatchBeginPositionQ79PF4452 ; faldo:reference isoform:Q79PF4-1 . ?templateMotifSequenceProfileAlignmentOperationQ79PF4458 edam:has_input signature:MF_01836 ; rdf:type edam:operation_0300 . ?targetMotifMatch459 faldo:location ?targetMotifMatchRegionMatch460 ; edam:is_output_of ?targetMotifSequenceAlignmentOperationMF_01836462 ; rdf:type edam:data_0869 ; rdf:value ?targetMotifMatchCigarQ79PF4MF_01836453 . ?targetMotifMatchRegionMatch460 faldo:begin ?targetMotifMatchRegionMatchBeginMF_01836461 . ?targetMotifMatchRegionMatchBeginMF_01836461 faldo:position ?targetMotifMatchRegionMatchBeginPositionMF_01836454 ; faldo:reference ?thisSequence . ?targetMotifSequenceAlignmentOperationMF_01836462 edam:has_input signature:MF_01836 ; rdf:type edam:operation_0300 . BIND(STRLEN(REPLACE(SUBSTR(?templateMotifCigarQ79PF4MF_01836451, 1, (STRLEN(?templateMotifCigarQ79PF4MF_01836451) - STRLEN(REPLACE(?templateMotifCigarQ79PF4MF_01836451, CONCAT('^(?:-*[^-]){', STR(((225 - ?templateMotifSequenceMatchBeginPositionQ79PF4452) + 1)), '}'), '')))), '[a-z]', '')) AS ?step1463) . BIND((STRLEN(SUBSTR(?targetMotifMatchCigarQ79PF4MF_01836453, 1, (STRLEN(?targetMotifMatchCigarQ79PF4MF_01836453) - STRLEN(REPLACE(?targetMotifMatchCigarQ79PF4MF_01836453, CONCAT('^(?:[a-z]*(?:[A-Z]|-)){', STR(?step1463), '}'), ''))))) - STRLEN(REPLACE(SUBSTR(?targetMotifMatchCigarQ79PF4MF_01836453, 1, (STRLEN(?targetMotifMatchCigarQ79PF4MF_01836453) - STRLEN(REPLACE(?targetMotifMatchCigarQ79PF4MF_01836453, CONCAT('^(?:[a-z]*(?:[A-Z]|-)){', STR(?step1463), '}'), '')))), '[^-]', ''))) AS ?step2464) . BIND(((?step2464 + ?targetMotifMatchRegionMatchBeginPositionMF_01836454) - 1) AS ?thisPositionOn98) . BIND(?thisPositionOn98 AS ?thisPositionOn99) . BIND(?this AS ?pfs2t465) . BIND(URI(CONCAT(STR(?thisSequence), '#position', STR(?thisPositionOn98))) AS ?pfsb95) . BIND(URI(CONCAT(STR(?thisSequence), '#position', STR(?thisPositionOn99))) AS ?pfse96) . FILTER ((SUBSTR(?thisSequenceValue, ?thisPositionOn98, 1) = 'L')) . BIND(URI(CONCAT(STR(?this), '#MF_01836a94')) AS ?annotation94) . BIND(?this AS ?pfs93) . } OPTIONAL { ?this up:sequence ?thisSequence . ?thisSequence rdf:value ?thisSequenceValue . ?templateMotifMatch470 faldo:location ?templateMotifSequenceMatchRegionQ79PF4471 ; edam:is_output_of ?templateMotifSequenceProfileAlignmentOperationQ79PF4473 ; rdf:type edam:data_0869 ; rdf:value ?templateMotifCigarQ79PF4MF_01836466 . ?templateMotifSequenceMatchRegionQ79PF4471 faldo:begin ?templateMotifSequenceMatchBeginQ79PF4472 . ?templateMotifSequenceMatchBeginQ79PF4472 faldo:position ?templateMotifSequenceMatchBeginPositionQ79PF4467 ; faldo:reference isoform:Q79PF4-1 . ?templateMotifSequenceProfileAlignmentOperationQ79PF4473 edam:has_input signature:MF_01836 ; rdf:type edam:operation_0300 . ?targetMotifMatch474 faldo:location ?targetMotifMatchRegionMatch475 ; edam:is_output_of ?targetMotifSequenceAlignmentOperationMF_01836477 ; rdf:type edam:data_0869 ; rdf:value ?targetMotifMatchCigarQ79PF4MF_01836468 . ?targetMotifMatchRegionMatch475 faldo:begin ?targetMotifMatchRegionMatchBeginMF_01836476 . ?targetMotifMatchRegionMatchBeginMF_01836476 faldo:position ?targetMotifMatchRegionMatchBeginPositionMF_01836469 ; faldo:reference ?thisSequence . ?targetMotifSequenceAlignmentOperationMF_01836477 edam:has_input signature:MF_01836 ; rdf:type edam:operation_0300 . BIND(STRLEN(REPLACE(SUBSTR(?templateMotifCigarQ79PF4MF_01836466, 1, (STRLEN(?templateMotifCigarQ79PF4MF_01836466) - STRLEN(REPLACE(?templateMotifCigarQ79PF4MF_01836466, CONCAT('^(?:-*[^-]){', STR(((226 - ?templateMotifSequenceMatchBeginPositionQ79PF4467) + 1)), '}'), '')))), '[a-z]', '')) AS ?step1478) . BIND((STRLEN(SUBSTR(?targetMotifMatchCigarQ79PF4MF_01836468, 1, (STRLEN(?targetMotifMatchCigarQ79PF4MF_01836468) - STRLEN(REPLACE(?targetMotifMatchCigarQ79PF4MF_01836468, CONCAT('^(?:[a-z]*(?:[A-Z]|-)){', STR(?step1478), '}'), ''))))) - STRLEN(REPLACE(SUBSTR(?targetMotifMatchCigarQ79PF4MF_01836468, 1, (STRLEN(?targetMotifMatchCigarQ79PF4MF_01836468) - STRLEN(REPLACE(?targetMotifMatchCigarQ79PF4MF_01836468, CONCAT('^(?:[a-z]*(?:[A-Z]|-)){', STR(?step1478), '}'), '')))), '[^-]', ''))) AS ?step2479) . BIND(((?step2479 + ?targetMotifMatchRegionMatchBeginPositionMF_01836469) - 1) AS ?thisPositionOn105) . BIND(?thisPositionOn105 AS ?thisPositionOn106) . BIND(?this AS ?pfs2t480) . BIND(URI(CONCAT(STR(?thisSequence), '#position', STR(?thisPositionOn105))) AS ?pfsb102) . BIND(URI(CONCAT(STR(?thisSequence), '#position', STR(?thisPositionOn106))) AS ?pfse103) . FILTER ((SUBSTR(?thisSequenceValue, ?thisPositionOn105, 1) = 'R')) . BIND(URI(CONCAT(STR(?this), '#MF_01836a101')) AS ?annotation101) . BIND(?this AS ?pfs100) . } OPTIONAL { ?this up:sequence ?thisSequence . ?thisSequence rdf:value ?thisSequenceValue . ?templateMotifMatch485 faldo:location ?templateMotifSequenceMatchRegionQ79PF4486 ; edam:is_output_of ?templateMotifSequenceProfileAlignmentOperationQ79PF4488 ; rdf:type edam:data_0869 ; rdf:value ?templateMotifCigarQ79PF4MF_01836481 . ?templateMotifSequenceMatchRegionQ79PF4486 faldo:begin ?templateMotifSequenceMatchBeginQ79PF4487 . ?templateMotifSequenceMatchBeginQ79PF4487 faldo:position ?templateMotifSequenceMatchBeginPositionQ79PF4482 ; faldo:reference isoform:Q79PF4-1 . ?templateMotifSequenceProfileAlignmentOperationQ79PF4488 edam:has_input signature:MF_01836 ; rdf:type edam:operation_0300 . ?targetMotifMatch489 faldo:location ?targetMotifMatchRegionMatch490 ; edam:is_output_of ?targetMotifSequenceAlignmentOperationMF_01836492 ; rdf:type edam:data_0869 ; rdf:value ?targetMotifMatchCigarQ79PF4MF_01836483 . ?targetMotifMatchRegionMatch490 faldo:begin ?targetMotifMatchRegionMatchBeginMF_01836491 . ?targetMotifMatchRegionMatchBeginMF_01836491 faldo:position ?targetMotifMatchRegionMatchBeginPositionMF_01836484 ; faldo:reference ?thisSequence . ?targetMotifSequenceAlignmentOperationMF_01836492 edam:has_input signature:MF_01836 ; rdf:type edam:operation_0300 . BIND(STRLEN(REPLACE(SUBSTR(?templateMotifCigarQ79PF4MF_01836481, 1, (STRLEN(?templateMotifCigarQ79PF4MF_01836481) - STRLEN(REPLACE(?templateMotifCigarQ79PF4MF_01836481, CONCAT('^(?:-*[^-]){', STR(((228 - ?templateMotifSequenceMatchBeginPositionQ79PF4482) + 1)), '}'), '')))), '[a-z]', '')) AS ?step1493) . BIND((STRLEN(SUBSTR(?targetMotifMatchCigarQ79PF4MF_01836483, 1, (STRLEN(?targetMotifMatchCigarQ79PF4MF_01836483) - STRLEN(REPLACE(?targetMotifMatchCigarQ79PF4MF_01836483, CONCAT('^(?:[a-z]*(?:[A-Z]|-)){', STR(?step1493), '}'), ''))))) - STRLEN(REPLACE(SUBSTR(?targetMotifMatchCigarQ79PF4MF_01836483, 1, (STRLEN(?targetMotifMatchCigarQ79PF4MF_01836483) - STRLEN(REPLACE(?targetMotifMatchCigarQ79PF4MF_01836483, CONCAT('^(?:[a-z]*(?:[A-Z]|-)){', STR(?step1493), '}'), '')))), '[^-]', ''))) AS ?step2494) . BIND(((?step2494 + ?targetMotifMatchRegionMatchBeginPositionMF_01836484) - 1) AS ?thisPositionOn112) . BIND(?thisPositionOn112 AS ?thisPositionOn113) . BIND(?this AS ?pfs2t495) . BIND(URI(CONCAT(STR(?thisSequence), '#position', STR(?thisPositionOn112))) AS ?pfsb109) . BIND(URI(CONCAT(STR(?thisSequence), '#position', STR(?thisPositionOn113))) AS ?pfse110) . FILTER ((SUBSTR(?thisSequenceValue, ?thisPositionOn112, 1) = 'T')) . BIND(URI(CONCAT(STR(?this), '#MF_01836a108')) AS ?annotation108) . BIND(?this AS ?pfs107) . } OPTIONAL { ?this up:sequence ?thisSequence . ?thisSequence rdf:value ?thisSequenceValue . ?templateMotifMatch500 faldo:location ?templateMotifSequenceMatchRegionQ79PF4501 ; edam:is_output_of ?templateMotifSequenceProfileAlignmentOperationQ79PF4503 ; rdf:type edam:data_0869 ; rdf:value ?templateMotifCigarQ79PF4MF_01836496 . ?templateMotifSequenceMatchRegionQ79PF4501 faldo:begin ?templateMotifSequenceMatchBeginQ79PF4502 . ?templateMotifSequenceMatchBeginQ79PF4502 faldo:position ?templateMotifSequenceMatchBeginPositionQ79PF4497 ; faldo:reference isoform:Q79PF4-1 . ?templateMotifSequenceProfileAlignmentOperationQ79PF4503 edam:has_input signature:MF_01836 ; rdf:type edam:operation_0300 . ?targetMotifMatch504 faldo:location ?targetMotifMatchRegionMatch505 ; edam:is_output_of ?targetMotifSequenceAlignmentOperationMF_01836507 ; rdf:type edam:data_0869 ; rdf:value ?targetMotifMatchCigarQ79PF4MF_01836498 . ?targetMotifMatchRegionMatch505 faldo:begin ?targetMotifMatchRegionMatchBeginMF_01836506 . ?targetMotifMatchRegionMatchBeginMF_01836506 faldo:position ?targetMotifMatchRegionMatchBeginPositionMF_01836499 ; faldo:reference ?thisSequence . ?targetMotifSequenceAlignmentOperationMF_01836507 edam:has_input signature:MF_01836 ; rdf:type edam:operation_0300 . BIND(STRLEN(REPLACE(SUBSTR(?templateMotifCigarQ79PF4MF_01836496, 1, (STRLEN(?templateMotifCigarQ79PF4MF_01836496) - STRLEN(REPLACE(?templateMotifCigarQ79PF4MF_01836496, CONCAT('^(?:-*[^-]){', STR(((230 - ?templateMotifSequenceMatchBeginPositionQ79PF4497) + 1)), '}'), '')))), '[a-z]', '')) AS ?step1508) . BIND((STRLEN(SUBSTR(?targetMotifMatchCigarQ79PF4MF_01836498, 1, (STRLEN(?targetMotifMatchCigarQ79PF4MF_01836498) - STRLEN(REPLACE(?targetMotifMatchCigarQ79PF4MF_01836498, CONCAT('^(?:[a-z]*(?:[A-Z]|-)){', STR(?step1508), '}'), ''))))) - STRLEN(REPLACE(SUBSTR(?targetMotifMatchCigarQ79PF4MF_01836498, 1, (STRLEN(?targetMotifMatchCigarQ79PF4MF_01836498) - STRLEN(REPLACE(?targetMotifMatchCigarQ79PF4MF_01836498, CONCAT('^(?:[a-z]*(?:[A-Z]|-)){', STR(?step1508), '}'), '')))), '[^-]', ''))) AS ?step2509) . BIND(((?step2509 + ?targetMotifMatchRegionMatchBeginPositionMF_01836499) - 1) AS ?thisPositionOn119) . BIND(?thisPositionOn119 AS ?thisPositionOn120) . BIND(?this AS ?pfs2t510) . BIND(URI(CONCAT(STR(?thisSequence), '#position', STR(?thisPositionOn119))) AS ?pfsb116) . BIND(URI(CONCAT(STR(?thisSequence), '#position', STR(?thisPositionOn120))) AS ?pfse117) . FILTER ((SUBSTR(?thisSequenceValue, ?thisPositionOn119, 1) = 'H')) . BIND(URI(CONCAT(STR(?this), '#MF_01836a115')) AS ?annotation115) . BIND(?this AS ?pfs114) . } OPTIONAL { ?this up:sequence ?thisSequence . ?thisSequence rdf:value ?thisSequenceValue . ?templateMotifMatch515 faldo:location ?templateMotifSequenceMatchRegionQ79PF4516 ; edam:is_output_of ?templateMotifSequenceProfileAlignmentOperationQ79PF4518 ; rdf:type edam:data_0869 ; rdf:value ?templateMotifCigarQ79PF4MF_01836511 . ?templateMotifSequenceMatchRegionQ79PF4516 faldo:begin ?templateMotifSequenceMatchBeginQ79PF4517 . ?templateMotifSequenceMatchBeginQ79PF4517 faldo:position ?templateMotifSequenceMatchBeginPositionQ79PF4512 ; faldo:reference isoform:Q79PF4-1 . ?templateMotifSequenceProfileAlignmentOperationQ79PF4518 edam:has_input signature:MF_01836 ; rdf:type edam:operation_0300 . ?targetMotifMatch519 faldo:location ?targetMotifMatchRegionMatch520 ; edam:is_output_of ?targetMotifSequenceAlignmentOperationMF_01836522 ; rdf:type edam:data_0869 ; rdf:value ?targetMotifMatchCigarQ79PF4MF_01836513 . ?targetMotifMatchRegionMatch520 faldo:begin ?targetMotifMatchRegionMatchBeginMF_01836521 . ?targetMotifMatchRegionMatchBeginMF_01836521 faldo:position ?targetMotifMatchRegionMatchBeginPositionMF_01836514 ; faldo:reference ?thisSequence . ?targetMotifSequenceAlignmentOperationMF_01836522 edam:has_input signature:MF_01836 ; rdf:type edam:operation_0300 . BIND(STRLEN(REPLACE(SUBSTR(?templateMotifCigarQ79PF4MF_01836511, 1, (STRLEN(?templateMotifCigarQ79PF4MF_01836511) - STRLEN(REPLACE(?templateMotifCigarQ79PF4MF_01836511, CONCAT('^(?:-*[^-]){', STR(((240 - ?templateMotifSequenceMatchBeginPositionQ79PF4512) + 1)), '}'), '')))), '[a-z]', '')) AS ?step1523) . BIND((STRLEN(SUBSTR(?targetMotifMatchCigarQ79PF4MF_01836513, 1, (STRLEN(?targetMotifMatchCigarQ79PF4MF_01836513) - STRLEN(REPLACE(?targetMotifMatchCigarQ79PF4MF_01836513, CONCAT('^(?:[a-z]*(?:[A-Z]|-)){', STR(?step1523), '}'), ''))))) - STRLEN(REPLACE(SUBSTR(?targetMotifMatchCigarQ79PF4MF_01836513, 1, (STRLEN(?targetMotifMatchCigarQ79PF4MF_01836513) - STRLEN(REPLACE(?targetMotifMatchCigarQ79PF4MF_01836513, CONCAT('^(?:[a-z]*(?:[A-Z]|-)){', STR(?step1523), '}'), '')))), '[^-]', ''))) AS ?step2524) . BIND(((?step2524 + ?targetMotifMatchRegionMatchBeginPositionMF_01836514) - 1) AS ?thisPositionOn126) . BIND(?thisPositionOn126 AS ?thisPositionOn127) . BIND(?this AS ?pfs2t525) . BIND(URI(CONCAT(STR(?thisSequence), '#position', STR(?thisPositionOn126))) AS ?pfsb123) . BIND(URI(CONCAT(STR(?thisSequence), '#position', STR(?thisPositionOn127))) AS ?pfse124) . FILTER ((SUBSTR(?thisSequenceValue, ?thisPositionOn126, 1) = 'T')) . BIND(URI(CONCAT(STR(?this), '#MF_01836a122')) AS ?annotation122) . BIND(?this AS ?pfs121) . } OPTIONAL { ?this up:sequence ?thisSequence . ?thisSequence rdf:value ?thisSequenceValue . ?templateMotifMatch530 faldo:location ?templateMotifSequenceMatchRegionQ79PF4531 ; edam:is_output_of ?templateMotifSequenceProfileAlignmentOperationQ79PF4533 ; rdf:type edam:data_0869 ; rdf:value ?templateMotifCigarQ79PF4MF_01836526 . ?templateMotifSequenceMatchRegionQ79PF4531 faldo:begin ?templateMotifSequenceMatchBeginQ79PF4532 . ?templateMotifSequenceMatchBeginQ79PF4532 faldo:position ?templateMotifSequenceMatchBeginPositionQ79PF4527 ; faldo:reference isoform:Q79PF4-1 . ?templateMotifSequenceProfileAlignmentOperationQ79PF4533 edam:has_input signature:MF_01836 ; rdf:type edam:operation_0300 . ?targetMotifMatch534 faldo:location ?targetMotifMatchRegionMatch535 ; edam:is_output_of ?targetMotifSequenceAlignmentOperationMF_01836537 ; rdf:type edam:data_0869 ; rdf:value ?targetMotifMatchCigarQ79PF4MF_01836528 . ?targetMotifMatchRegionMatch535 faldo:begin ?targetMotifMatchRegionMatchBeginMF_01836536 . ?targetMotifMatchRegionMatchBeginMF_01836536 faldo:position ?targetMotifMatchRegionMatchBeginPositionMF_01836529 ; faldo:reference ?thisSequence . ?targetMotifSequenceAlignmentOperationMF_01836537 edam:has_input signature:MF_01836 ; rdf:type edam:operation_0300 . BIND(STRLEN(REPLACE(SUBSTR(?templateMotifCigarQ79PF4MF_01836526, 1, (STRLEN(?templateMotifCigarQ79PF4MF_01836526) - STRLEN(REPLACE(?templateMotifCigarQ79PF4MF_01836526, CONCAT('^(?:-*[^-]){', STR(((241 - ?templateMotifSequenceMatchBeginPositionQ79PF4527) + 1)), '}'), '')))), '[a-z]', '')) AS ?step1538) . BIND((STRLEN(SUBSTR(?targetMotifMatchCigarQ79PF4MF_01836528, 1, (STRLEN(?targetMotifMatchCigarQ79PF4MF_01836528) - STRLEN(REPLACE(?targetMotifMatchCigarQ79PF4MF_01836528, CONCAT('^(?:[a-z]*(?:[A-Z]|-)){', STR(?step1538), '}'), ''))))) - STRLEN(REPLACE(SUBSTR(?targetMotifMatchCigarQ79PF4MF_01836528, 1, (STRLEN(?targetMotifMatchCigarQ79PF4MF_01836528) - STRLEN(REPLACE(?targetMotifMatchCigarQ79PF4MF_01836528, CONCAT('^(?:[a-z]*(?:[A-Z]|-)){', STR(?step1538), '}'), '')))), '[^-]', ''))) AS ?step2539) . BIND(((?step2539 + ?targetMotifMatchRegionMatchBeginPositionMF_01836529) - 1) AS ?thisPositionOn133) . BIND(?thisPositionOn133 AS ?thisPositionOn134) . BIND(?this AS ?pfs2t540) . BIND(URI(CONCAT(STR(?thisSequence), '#position', STR(?thisPositionOn133))) AS ?pfsb130) . BIND(URI(CONCAT(STR(?thisSequence), '#position', STR(?thisPositionOn134))) AS ?pfse131) . FILTER ((SUBSTR(?thisSequenceValue, ?thisPositionOn133, 1) = 'D')) . BIND(URI(CONCAT(STR(?this), '#MF_01836a129')) AS ?annotation129) . BIND(?this AS ?pfs128) . } OPTIONAL { ?this up:sequence ?thisSequence . ?thisSequence rdf:value ?thisSequenceValue . ?templateMotifMatch545 faldo:location ?templateMotifSequenceMatchRegionQ79PF4546 ; edam:is_output_of ?templateMotifSequenceProfileAlignmentOperationQ79PF4548 ; rdf:type edam:data_0869 ; rdf:value ?templateMotifCigarQ79PF4MF_01836541 . ?templateMotifSequenceMatchRegionQ79PF4546 faldo:begin ?templateMotifSequenceMatchBeginQ79PF4547 . ?templateMotifSequenceMatchBeginQ79PF4547 faldo:position ?templateMotifSequenceMatchBeginPositionQ79PF4542 ; faldo:reference isoform:Q79PF4-1 . ?templateMotifSequenceProfileAlignmentOperationQ79PF4548 edam:has_input signature:MF_01836 ; rdf:type edam:operation_0300 . ?targetMotifMatch549 faldo:location ?targetMotifMatchRegionMatch550 ; edam:is_output_of ?targetMotifSequenceAlignmentOperationMF_01836552 ; rdf:type edam:data_0869 ; rdf:value ?targetMotifMatchCigarQ79PF4MF_01836543 . ?targetMotifMatchRegionMatch550 faldo:begin ?targetMotifMatchRegionMatchBeginMF_01836551 . ?targetMotifMatchRegionMatchBeginMF_01836551 faldo:position ?targetMotifMatchRegionMatchBeginPositionMF_01836544 ; faldo:reference ?thisSequence . ?targetMotifSequenceAlignmentOperationMF_01836552 edam:has_input signature:MF_01836 ; rdf:type edam:operation_0300 . BIND(STRLEN(REPLACE(SUBSTR(?templateMotifCigarQ79PF4MF_01836541, 1, (STRLEN(?templateMotifCigarQ79PF4MF_01836541) - STRLEN(REPLACE(?templateMotifCigarQ79PF4MF_01836541, CONCAT('^(?:-*[^-]){', STR(((290 - ?templateMotifSequenceMatchBeginPositionQ79PF4542) + 1)), '}'), '')))), '[a-z]', '')) AS ?step1553) . BIND((STRLEN(SUBSTR(?targetMotifMatchCigarQ79PF4MF_01836543, 1, (STRLEN(?targetMotifMatchCigarQ79PF4MF_01836543) - STRLEN(REPLACE(?targetMotifMatchCigarQ79PF4MF_01836543, CONCAT('^(?:[a-z]*(?:[A-Z]|-)){', STR(?step1553), '}'), ''))))) - STRLEN(REPLACE(SUBSTR(?targetMotifMatchCigarQ79PF4MF_01836543, 1, (STRLEN(?targetMotifMatchCigarQ79PF4MF_01836543) - STRLEN(REPLACE(?targetMotifMatchCigarQ79PF4MF_01836543, CONCAT('^(?:[a-z]*(?:[A-Z]|-)){', STR(?step1553), '}'), '')))), '[^-]', ''))) AS ?step2554) . BIND(((?step2554 + ?targetMotifMatchRegionMatchBeginPositionMF_01836544) - 1) AS ?thisPositionOn140) . BIND(?thisPositionOn140 AS ?thisPositionOn141) . BIND(?this AS ?pfs2t555) . BIND(URI(CONCAT(STR(?thisSequence), '#position', STR(?thisPositionOn140))) AS ?pfsb137) . BIND(URI(CONCAT(STR(?thisSequence), '#position', STR(?thisPositionOn141))) AS ?pfse138) . FILTER ((SUBSTR(?thisSequenceValue, ?thisPositionOn140, 1) = 'T')) . BIND(URI(CONCAT(STR(?this), '#MF_01836a136')) AS ?annotation136) . BIND(?this AS ?pfs135) . } OPTIONAL { ?this up:sequence ?thisSequence . ?thisSequence rdf:value ?thisSequenceValue . ?templateMotifMatch560 faldo:location ?templateMotifSequenceMatchRegionQ79PF4561 ; edam:is_output_of ?templateMotifSequenceProfileAlignmentOperationQ79PF4563 ; rdf:type edam:data_0869 ; rdf:value ?templateMotifCigarQ79PF4MF_01836556 . ?templateMotifSequenceMatchRegionQ79PF4561 faldo:begin ?templateMotifSequenceMatchBeginQ79PF4562 . ?templateMotifSequenceMatchBeginQ79PF4562 faldo:position ?templateMotifSequenceMatchBeginPositionQ79PF4557 ; faldo:reference isoform:Q79PF4-1 . ?templateMotifSequenceProfileAlignmentOperationQ79PF4563 edam:has_input signature:MF_01836 ; rdf:type edam:operation_0300 . ?targetMotifMatch564 faldo:location ?targetMotifMatchRegionMatch565 ; edam:is_output_of ?targetMotifSequenceAlignmentOperationMF_01836567 ; rdf:type edam:data_0869 ; rdf:value ?targetMotifMatchCigarQ79PF4MF_01836558 . ?targetMotifMatchRegionMatch565 faldo:begin ?targetMotifMatchRegionMatchBeginMF_01836566 . ?targetMotifMatchRegionMatchBeginMF_01836566 faldo:position ?targetMotifMatchRegionMatchBeginPositionMF_01836559 ; faldo:reference ?thisSequence . ?targetMotifSequenceAlignmentOperationMF_01836567 edam:has_input signature:MF_01836 ; rdf:type edam:operation_0300 . BIND(STRLEN(REPLACE(SUBSTR(?templateMotifCigarQ79PF4MF_01836556, 1, (STRLEN(?templateMotifCigarQ79PF4MF_01836556) - STRLEN(REPLACE(?templateMotifCigarQ79PF4MF_01836556, CONCAT('^(?:-*[^-]){', STR(((291 - ?templateMotifSequenceMatchBeginPositionQ79PF4557) + 1)), '}'), '')))), '[a-z]', '')) AS ?step1568) . BIND((STRLEN(SUBSTR(?targetMotifMatchCigarQ79PF4MF_01836558, 1, (STRLEN(?targetMotifMatchCigarQ79PF4MF_01836558) - STRLEN(REPLACE(?targetMotifMatchCigarQ79PF4MF_01836558, CONCAT('^(?:[a-z]*(?:[A-Z]|-)){', STR(?step1568), '}'), ''))))) - STRLEN(REPLACE(SUBSTR(?targetMotifMatchCigarQ79PF4MF_01836558, 1, (STRLEN(?targetMotifMatchCigarQ79PF4MF_01836558) - STRLEN(REPLACE(?targetMotifMatchCigarQ79PF4MF_01836558, CONCAT('^(?:[a-z]*(?:[A-Z]|-)){', STR(?step1568), '}'), '')))), '[^-]', ''))) AS ?step2569) . BIND(((?step2569 + ?targetMotifMatchRegionMatchBeginPositionMF_01836559) - 1) AS ?thisPositionOn147) . BIND(?thisPositionOn147 AS ?thisPositionOn148) . BIND(?this AS ?pfs2t570) . BIND(URI(CONCAT(STR(?thisSequence), '#position', STR(?thisPositionOn147))) AS ?pfsb144) . BIND(URI(CONCAT(STR(?thisSequence), '#position', STR(?thisPositionOn148))) AS ?pfse145) . FILTER ((SUBSTR(?thisSequenceValue, ?thisPositionOn147, 1) = 'G')) . BIND(URI(CONCAT(STR(?this), '#MF_01836a143')) AS ?annotation143) . BIND(?this AS ?pfs142) . } OPTIONAL { ?this up:sequence ?thisSequence . ?thisSequence rdf:value ?thisSequenceValue . ?templateMotifMatch575 faldo:location ?templateMotifSequenceMatchRegionQ79PF4576 ; edam:is_output_of ?templateMotifSequenceProfileAlignmentOperationQ79PF4578 ; rdf:type edam:data_0869 ; rdf:value ?templateMotifCigarQ79PF4MF_01836571 . ?templateMotifSequenceMatchRegionQ79PF4576 faldo:begin ?templateMotifSequenceMatchBeginQ79PF4577 . ?templateMotifSequenceMatchBeginQ79PF4577 faldo:position ?templateMotifSequenceMatchBeginPositionQ79PF4572 ; faldo:reference isoform:Q79PF4-1 . ?templateMotifSequenceProfileAlignmentOperationQ79PF4578 edam:has_input signature:MF_01836 ; rdf:type edam:operation_0300 . ?targetMotifMatch579 faldo:location ?targetMotifMatchRegionMatch580 ; edam:is_output_of ?targetMotifSequenceAlignmentOperationMF_01836582 ; rdf:type edam:data_0869 ; rdf:value ?targetMotifMatchCigarQ79PF4MF_01836573 . ?targetMotifMatchRegionMatch580 faldo:begin ?targetMotifMatchRegionMatchBeginMF_01836581 . ?targetMotifMatchRegionMatchBeginMF_01836581 faldo:position ?targetMotifMatchRegionMatchBeginPositionMF_01836574 ; faldo:reference ?thisSequence . ?targetMotifSequenceAlignmentOperationMF_01836582 edam:has_input signature:MF_01836 ; rdf:type edam:operation_0300 . BIND(STRLEN(REPLACE(SUBSTR(?templateMotifCigarQ79PF4MF_01836571, 1, (STRLEN(?templateMotifCigarQ79PF4MF_01836571) - STRLEN(REPLACE(?templateMotifCigarQ79PF4MF_01836571, CONCAT('^(?:-*[^-]){', STR(((292 - ?templateMotifSequenceMatchBeginPositionQ79PF4572) + 1)), '}'), '')))), '[a-z]', '')) AS ?step1583) . BIND((STRLEN(SUBSTR(?targetMotifMatchCigarQ79PF4MF_01836573, 1, (STRLEN(?targetMotifMatchCigarQ79PF4MF_01836573) - STRLEN(REPLACE(?targetMotifMatchCigarQ79PF4MF_01836573, CONCAT('^(?:[a-z]*(?:[A-Z]|-)){', STR(?step1583), '}'), ''))))) - STRLEN(REPLACE(SUBSTR(?targetMotifMatchCigarQ79PF4MF_01836573, 1, (STRLEN(?targetMotifMatchCigarQ79PF4MF_01836573) - STRLEN(REPLACE(?targetMotifMatchCigarQ79PF4MF_01836573, CONCAT('^(?:[a-z]*(?:[A-Z]|-)){', STR(?step1583), '}'), '')))), '[^-]', ''))) AS ?step2584) . BIND(((?step2584 + ?targetMotifMatchRegionMatchBeginPositionMF_01836574) - 1) AS ?thisPositionOn154) . BIND(?thisPositionOn154 AS ?thisPositionOn155) . BIND(?this AS ?pfs2t585) . BIND(URI(CONCAT(STR(?thisSequence), '#position', STR(?thisPositionOn154))) AS ?pfsb151) . BIND(URI(CONCAT(STR(?thisSequence), '#position', STR(?thisPositionOn155))) AS ?pfse152) . FILTER ((SUBSTR(?thisSequenceValue, ?thisPositionOn154, 1) = 'T')) . BIND(URI(CONCAT(STR(?this), '#MF_01836a150')) AS ?annotation150) . BIND(?this AS ?pfs149) . } OPTIONAL { ?this up:sequence ?thisSequence . ?thisSequence rdf:value ?thisSequenceValue . ?templateMotifMatch590 faldo:location ?templateMotifSequenceMatchRegionQ79PF4591 ; edam:is_output_of ?templateMotifSequenceProfileAlignmentOperationQ79PF4593 ; rdf:type edam:data_0869 ; rdf:value ?templateMotifCigarQ79PF4MF_01836586 . ?templateMotifSequenceMatchRegionQ79PF4591 faldo:begin ?templateMotifSequenceMatchBeginQ79PF4592 . ?templateMotifSequenceMatchBeginQ79PF4592 faldo:position ?templateMotifSequenceMatchBeginPositionQ79PF4587 ; faldo:reference isoform:Q79PF4-1 . ?templateMotifSequenceProfileAlignmentOperationQ79PF4593 edam:has_input signature:MF_01836 ; rdf:type edam:operation_0300 . ?targetMotifMatch594 faldo:location ?targetMotifMatchRegionMatch595 ; edam:is_output_of ?targetMotifSequenceAlignmentOperationMF_01836597 ; rdf:type edam:data_0869 ; rdf:value ?targetMotifMatchCigarQ79PF4MF_01836588 . ?targetMotifMatchRegionMatch595 faldo:begin ?targetMotifMatchRegionMatchBeginMF_01836596 . ?targetMotifMatchRegionMatchBeginMF_01836596 faldo:position ?targetMotifMatchRegionMatchBeginPositionMF_01836589 ; faldo:reference ?thisSequence . ?targetMotifSequenceAlignmentOperationMF_01836597 edam:has_input signature:MF_01836 ; rdf:type edam:operation_0300 . BIND(STRLEN(REPLACE(SUBSTR(?templateMotifCigarQ79PF4MF_01836586, 1, (STRLEN(?templateMotifCigarQ79PF4MF_01836586) - STRLEN(REPLACE(?templateMotifCigarQ79PF4MF_01836586, CONCAT('^(?:-*[^-]){', STR(((293 - ?templateMotifSequenceMatchBeginPositionQ79PF4587) + 1)), '}'), '')))), '[a-z]', '')) AS ?step1598) . BIND((STRLEN(SUBSTR(?targetMotifMatchCigarQ79PF4MF_01836588, 1, (STRLEN(?targetMotifMatchCigarQ79PF4MF_01836588) - STRLEN(REPLACE(?targetMotifMatchCigarQ79PF4MF_01836588, CONCAT('^(?:[a-z]*(?:[A-Z]|-)){', STR(?step1598), '}'), ''))))) - STRLEN(REPLACE(SUBSTR(?targetMotifMatchCigarQ79PF4MF_01836588, 1, (STRLEN(?targetMotifMatchCigarQ79PF4MF_01836588) - STRLEN(REPLACE(?targetMotifMatchCigarQ79PF4MF_01836588, CONCAT('^(?:[a-z]*(?:[A-Z]|-)){', STR(?step1598), '}'), '')))), '[^-]', ''))) AS ?step2599) . BIND(((?step2599 + ?targetMotifMatchRegionMatchBeginPositionMF_01836589) - 1) AS ?thisPositionOn161) . BIND(?thisPositionOn161 AS ?thisPositionOn162) . BIND(?this AS ?pfs2t600) . BIND(URI(CONCAT(STR(?thisSequence), '#position', STR(?thisPositionOn161))) AS ?pfsb158) . BIND(URI(CONCAT(STR(?thisSequence), '#position', STR(?thisPositionOn162))) AS ?pfse159) . FILTER ((SUBSTR(?thisSequenceValue, ?thisPositionOn161, 1) = 'G')) . BIND(URI(CONCAT(STR(?this), '#MF_01836a157')) AS ?annotation157) . BIND(?this AS ?pfs156) . } OPTIONAL { ?this up:sequence ?thisSequence . ?thisSequence rdf:value ?thisSequenceValue . ?templateMotifMatch605 faldo:location ?templateMotifSequenceMatchRegionQ79PF4606 ; edam:is_output_of ?templateMotifSequenceProfileAlignmentOperationQ79PF4608 ; rdf:type edam:data_0869 ; rdf:value ?templateMotifCigarQ79PF4MF_01836601 . ?templateMotifSequenceMatchRegionQ79PF4606 faldo:begin ?templateMotifSequenceMatchBeginQ79PF4607 . ?templateMotifSequenceMatchBeginQ79PF4607 faldo:position ?templateMotifSequenceMatchBeginPositionQ79PF4602 ; faldo:reference isoform:Q79PF4-1 . ?templateMotifSequenceProfileAlignmentOperationQ79PF4608 edam:has_input signature:MF_01836 ; rdf:type edam:operation_0300 . ?targetMotifMatch609 faldo:location ?targetMotifMatchRegionMatch610 ; edam:is_output_of ?targetMotifSequenceAlignmentOperationMF_01836612 ; rdf:type edam:data_0869 ; rdf:value ?targetMotifMatchCigarQ79PF4MF_01836603 . ?targetMotifMatchRegionMatch610 faldo:begin ?targetMotifMatchRegionMatchBeginMF_01836611 . ?targetMotifMatchRegionMatchBeginMF_01836611 faldo:position ?targetMotifMatchRegionMatchBeginPositionMF_01836604 ; faldo:reference ?thisSequence . ?targetMotifSequenceAlignmentOperationMF_01836612 edam:has_input signature:MF_01836 ; rdf:type edam:operation_0300 . BIND(STRLEN(REPLACE(SUBSTR(?templateMotifCigarQ79PF4MF_01836601, 1, (STRLEN(?templateMotifCigarQ79PF4MF_01836601) - STRLEN(REPLACE(?templateMotifCigarQ79PF4MF_01836601, CONCAT('^(?:-*[^-]){', STR(((294 - ?templateMotifSequenceMatchBeginPositionQ79PF4602) + 1)), '}'), '')))), '[a-z]', '')) AS ?step1613) . BIND((STRLEN(SUBSTR(?targetMotifMatchCigarQ79PF4MF_01836603, 1, (STRLEN(?targetMotifMatchCigarQ79PF4MF_01836603) - STRLEN(REPLACE(?targetMotifMatchCigarQ79PF4MF_01836603, CONCAT('^(?:[a-z]*(?:[A-Z]|-)){', STR(?step1613), '}'), ''))))) - STRLEN(REPLACE(SUBSTR(?targetMotifMatchCigarQ79PF4MF_01836603, 1, (STRLEN(?targetMotifMatchCigarQ79PF4MF_01836603) - STRLEN(REPLACE(?targetMotifMatchCigarQ79PF4MF_01836603, CONCAT('^(?:[a-z]*(?:[A-Z]|-)){', STR(?step1613), '}'), '')))), '[^-]', ''))) AS ?step2614) . BIND(((?step2614 + ?targetMotifMatchRegionMatchBeginPositionMF_01836604) - 1) AS ?thisPositionOn168) . BIND(?thisPositionOn168 AS ?thisPositionOn169) . BIND(?this AS ?pfs2t615) . BIND(URI(CONCAT(STR(?thisSequence), '#position', STR(?thisPositionOn168))) AS ?pfsb165) . BIND(URI(CONCAT(STR(?thisSequence), '#position', STR(?thisPositionOn169))) AS ?pfse166) . FILTER ((SUBSTR(?thisSequenceValue, ?thisPositionOn168, 1) = 'K')) . BIND(URI(CONCAT(STR(?this), '#MF_01836a164')) AS ?annotation164) . BIND(?this AS ?pfs163) . } OPTIONAL { ?this up:sequence ?thisSequence . ?thisSequence rdf:value ?thisSequenceValue . ?templateMotifMatch620 faldo:location ?templateMotifSequenceMatchRegionQ79PF4621 ; edam:is_output_of ?templateMotifSequenceProfileAlignmentOperationQ79PF4623 ; rdf:type edam:data_0869 ; rdf:value ?templateMotifCigarQ79PF4MF_01836616 . ?templateMotifSequenceMatchRegionQ79PF4621 faldo:begin ?templateMotifSequenceMatchBeginQ79PF4622 . ?templateMotifSequenceMatchBeginQ79PF4622 faldo:position ?templateMotifSequenceMatchBeginPositionQ79PF4617 ; faldo:reference isoform:Q79PF4-1 . ?templateMotifSequenceProfileAlignmentOperationQ79PF4623 edam:has_input signature:MF_01836 ; rdf:type edam:operation_0300 . ?targetMotifMatch624 faldo:location ?targetMotifMatchRegionMatch625 ; edam:is_output_of ?targetMotifSequenceAlignmentOperationMF_01836627 ; rdf:type edam:data_0869 ; rdf:value ?targetMotifMatchCigarQ79PF4MF_01836618 . ?targetMotifMatchRegionMatch625 faldo:begin ?targetMotifMatchRegionMatchBeginMF_01836626 . ?targetMotifMatchRegionMatchBeginMF_01836626 faldo:position ?targetMotifMatchRegionMatchBeginPositionMF_01836619 ; faldo:reference ?thisSequence . ?targetMotifSequenceAlignmentOperationMF_01836627 edam:has_input signature:MF_01836 ; rdf:type edam:operation_0300 . BIND(STRLEN(REPLACE(SUBSTR(?templateMotifCigarQ79PF4MF_01836616, 1, (STRLEN(?templateMotifCigarQ79PF4MF_01836616) - STRLEN(REPLACE(?templateMotifCigarQ79PF4MF_01836616, CONCAT('^(?:-*[^-]){', STR(((295 - ?templateMotifSequenceMatchBeginPositionQ79PF4617) + 1)), '}'), '')))), '[a-z]', '')) AS ?step1628) . BIND((STRLEN(SUBSTR(?targetMotifMatchCigarQ79PF4MF_01836618, 1, (STRLEN(?targetMotifMatchCigarQ79PF4MF_01836618) - STRLEN(REPLACE(?targetMotifMatchCigarQ79PF4MF_01836618, CONCAT('^(?:[a-z]*(?:[A-Z]|-)){', STR(?step1628), '}'), ''))))) - STRLEN(REPLACE(SUBSTR(?targetMotifMatchCigarQ79PF4MF_01836618, 1, (STRLEN(?targetMotifMatchCigarQ79PF4MF_01836618) - STRLEN(REPLACE(?targetMotifMatchCigarQ79PF4MF_01836618, CONCAT('^(?:[a-z]*(?:[A-Z]|-)){', STR(?step1628), '}'), '')))), '[^-]', ''))) AS ?step2629) . BIND(((?step2629 + ?targetMotifMatchRegionMatchBeginPositionMF_01836619) - 1) AS ?thisPositionOn175) . BIND(?thisPositionOn175 AS ?thisPositionOn176) . BIND(?this AS ?pfs2t630) . BIND(URI(CONCAT(STR(?thisSequence), '#position', STR(?thisPositionOn175))) AS ?pfsb172) . BIND(URI(CONCAT(STR(?thisSequence), '#position', STR(?thisPositionOn176))) AS ?pfse173) . FILTER ((SUBSTR(?thisSequenceValue, ?thisPositionOn175, 1) = 'T')) . BIND(URI(CONCAT(STR(?this), '#MF_01836a171')) AS ?annotation171) . BIND(?this AS ?pfs170) . } OPTIONAL { ?this up:sequence ?thisSequence . ?thisSequence rdf:value ?thisSequenceValue . ?templateMotifMatch635 faldo:location ?templateMotifSequenceMatchRegionQ79PF4636 ; edam:is_output_of ?templateMotifSequenceProfileAlignmentOperationQ79PF4638 ; rdf:type edam:data_0869 ; rdf:value ?templateMotifCigarQ79PF4MF_01836631 . ?templateMotifSequenceMatchRegionQ79PF4636 faldo:begin ?templateMotifSequenceMatchBeginQ79PF4637 . ?templateMotifSequenceMatchBeginQ79PF4637 faldo:position ?templateMotifSequenceMatchBeginPositionQ79PF4632 ; faldo:reference isoform:Q79PF4-1 . ?templateMotifSequenceProfileAlignmentOperationQ79PF4638 edam:has_input signature:MF_01836 ; rdf:type edam:operation_0300 . ?targetMotifMatch639 faldo:location ?targetMotifMatchRegionMatch640 ; edam:is_output_of ?targetMotifSequenceAlignmentOperationMF_01836642 ; rdf:type edam:data_0869 ; rdf:value ?targetMotifMatchCigarQ79PF4MF_01836633 . ?targetMotifMatchRegionMatch640 faldo:begin ?targetMotifMatchRegionMatchBeginMF_01836641 . ?targetMotifMatchRegionMatchBeginMF_01836641 faldo:position ?targetMotifMatchRegionMatchBeginPositionMF_01836634 ; faldo:reference ?thisSequence . ?targetMotifSequenceAlignmentOperationMF_01836642 edam:has_input signature:MF_01836 ; rdf:type edam:operation_0300 . BIND(STRLEN(REPLACE(SUBSTR(?templateMotifCigarQ79PF4MF_01836631, 1, (STRLEN(?templateMotifCigarQ79PF4MF_01836631) - STRLEN(REPLACE(?templateMotifCigarQ79PF4MF_01836631, CONCAT('^(?:-*[^-]){', STR(((295 - ?templateMotifSequenceMatchBeginPositionQ79PF4632) + 1)), '}'), '')))), '[a-z]', '')) AS ?step1643) . BIND((STRLEN(SUBSTR(?targetMotifMatchCigarQ79PF4MF_01836633, 1, (STRLEN(?targetMotifMatchCigarQ79PF4MF_01836633) - STRLEN(REPLACE(?targetMotifMatchCigarQ79PF4MF_01836633, CONCAT('^(?:[a-z]*(?:[A-Z]|-)){', STR(?step1643), '}'), ''))))) - STRLEN(REPLACE(SUBSTR(?targetMotifMatchCigarQ79PF4MF_01836633, 1, (STRLEN(?targetMotifMatchCigarQ79PF4MF_01836633) - STRLEN(REPLACE(?targetMotifMatchCigarQ79PF4MF_01836633, CONCAT('^(?:[a-z]*(?:[A-Z]|-)){', STR(?step1643), '}'), '')))), '[^-]', ''))) AS ?step2644) . BIND(((?step2644 + ?targetMotifMatchRegionMatchBeginPositionMF_01836634) - 1) AS ?thisPositionOn182) . BIND(?thisPositionOn182 AS ?thisPositionOn183) . BIND(?this AS ?pfs2t645) . BIND(URI(CONCAT(STR(?thisSequence), '#position', STR(?thisPositionOn182))) AS ?pfsb179) . BIND(URI(CONCAT(STR(?thisSequence), '#position', STR(?thisPositionOn183))) AS ?pfse180) . FILTER ((SUBSTR(?thisSequenceValue, ?thisPositionOn182, 1) = 'T')) . BIND(URI(CONCAT(STR(?this), '#MF_01836a178')) AS ?annotation178) . BIND(?this AS ?pfs177) . } OPTIONAL { ?this up:sequence ?thisSequence . ?thisSequence rdf:value ?thisSequenceValue . ?templateMotifMatch650 faldo:location ?templateMotifSequenceMatchRegionQ79PF4651 ; edam:is_output_of ?templateMotifSequenceProfileAlignmentOperationQ79PF4653 ; rdf:type edam:data_0869 ; rdf:value ?templateMotifCigarQ79PF4MF_01836646 . ?templateMotifSequenceMatchRegionQ79PF4651 faldo:begin ?templateMotifSequenceMatchBeginQ79PF4652 . ?templateMotifSequenceMatchBeginQ79PF4652 faldo:position ?templateMotifSequenceMatchBeginPositionQ79PF4647 ; faldo:reference isoform:Q79PF4-1 . ?templateMotifSequenceProfileAlignmentOperationQ79PF4653 edam:has_input signature:MF_01836 ; rdf:type edam:operation_0300 . ?targetMotifMatch654 faldo:location ?targetMotifMatchRegionMatch655 ; edam:is_output_of ?targetMotifSequenceAlignmentOperationMF_01836657 ; rdf:type edam:data_0869 ; rdf:value ?targetMotifMatchCigarQ79PF4MF_01836648 . ?targetMotifMatchRegionMatch655 faldo:begin ?targetMotifMatchRegionMatchBeginMF_01836656 . ?targetMotifMatchRegionMatchBeginMF_01836656 faldo:position ?targetMotifMatchRegionMatchBeginPositionMF_01836649 ; faldo:reference ?thisSequence . ?targetMotifSequenceAlignmentOperationMF_01836657 edam:has_input signature:MF_01836 ; rdf:type edam:operation_0300 . BIND(STRLEN(REPLACE(SUBSTR(?templateMotifCigarQ79PF4MF_01836646, 1, (STRLEN(?templateMotifCigarQ79PF4MF_01836646) - STRLEN(REPLACE(?templateMotifCigarQ79PF4MF_01836646, CONCAT('^(?:-*[^-]){', STR(((296 - ?templateMotifSequenceMatchBeginPositionQ79PF4647) + 1)), '}'), '')))), '[a-z]', '')) AS ?step1658) . BIND((STRLEN(SUBSTR(?targetMotifMatchCigarQ79PF4MF_01836648, 1, (STRLEN(?targetMotifMatchCigarQ79PF4MF_01836648) - STRLEN(REPLACE(?targetMotifMatchCigarQ79PF4MF_01836648, CONCAT('^(?:[a-z]*(?:[A-Z]|-)){', STR(?step1658), '}'), ''))))) - STRLEN(REPLACE(SUBSTR(?targetMotifMatchCigarQ79PF4MF_01836648, 1, (STRLEN(?targetMotifMatchCigarQ79PF4MF_01836648) - STRLEN(REPLACE(?targetMotifMatchCigarQ79PF4MF_01836648, CONCAT('^(?:[a-z]*(?:[A-Z]|-)){', STR(?step1658), '}'), '')))), '[^-]', ''))) AS ?step2659) . BIND(((?step2659 + ?targetMotifMatchRegionMatchBeginPositionMF_01836649) - 1) AS ?thisPositionOn189) . BIND(?thisPositionOn189 AS ?thisPositionOn190) . BIND(?this AS ?pfs2t660) . BIND(URI(CONCAT(STR(?thisSequence), '#position', STR(?thisPositionOn189))) AS ?pfsb186) . BIND(URI(CONCAT(STR(?thisSequence), '#position', STR(?thisPositionOn190))) AS ?pfse187) . FILTER ((SUBSTR(?thisSequenceValue, ?thisPositionOn189, 1) = 'L')) . BIND(URI(CONCAT(STR(?this), '#MF_01836a185')) AS ?annotation185) . BIND(?this AS ?pfs184) . } OPTIONAL { ?this up:sequence ?thisSequence . ?thisSequence rdf:value ?thisSequenceValue . ?templateMotifMatch665 faldo:location ?templateMotifSequenceMatchRegionQ79PF4666 ; edam:is_output_of ?templateMotifSequenceProfileAlignmentOperationQ79PF4668 ; rdf:type edam:data_0869 ; rdf:value ?templateMotifCigarQ79PF4MF_01836661 . ?templateMotifSequenceMatchRegionQ79PF4666 faldo:begin ?templateMotifSequenceMatchBeginQ79PF4667 . ?templateMotifSequenceMatchBeginQ79PF4667 faldo:position ?templateMotifSequenceMatchBeginPositionQ79PF4662 ; faldo:reference isoform:Q79PF4-1 . ?templateMotifSequenceProfileAlignmentOperationQ79PF4668 edam:has_input signature:MF_01836 ; rdf:type edam:operation_0300 . ?targetMotifMatch669 faldo:location ?targetMotifMatchRegionMatch670 ; edam:is_output_of ?targetMotifSequenceAlignmentOperationMF_01836672 ; rdf:type edam:data_0869 ; rdf:value ?targetMotifMatchCigarQ79PF4MF_01836663 . ?targetMotifMatchRegionMatch670 faldo:begin ?targetMotifMatchRegionMatchBeginMF_01836671 . ?targetMotifMatchRegionMatchBeginMF_01836671 faldo:position ?targetMotifMatchRegionMatchBeginPositionMF_01836664 ; faldo:reference ?thisSequence . ?targetMotifSequenceAlignmentOperationMF_01836672 edam:has_input signature:MF_01836 ; rdf:type edam:operation_0300 . BIND(STRLEN(REPLACE(SUBSTR(?templateMotifCigarQ79PF4MF_01836661, 1, (STRLEN(?templateMotifCigarQ79PF4MF_01836661) - STRLEN(REPLACE(?templateMotifCigarQ79PF4MF_01836661, CONCAT('^(?:-*[^-]){', STR(((318 - ?templateMotifSequenceMatchBeginPositionQ79PF4662) + 1)), '}'), '')))), '[a-z]', '')) AS ?step1673) . BIND((STRLEN(SUBSTR(?targetMotifMatchCigarQ79PF4MF_01836663, 1, (STRLEN(?targetMotifMatchCigarQ79PF4MF_01836663) - STRLEN(REPLACE(?targetMotifMatchCigarQ79PF4MF_01836663, CONCAT('^(?:[a-z]*(?:[A-Z]|-)){', STR(?step1673), '}'), ''))))) - STRLEN(REPLACE(SUBSTR(?targetMotifMatchCigarQ79PF4MF_01836663, 1, (STRLEN(?targetMotifMatchCigarQ79PF4MF_01836663) - STRLEN(REPLACE(?targetMotifMatchCigarQ79PF4MF_01836663, CONCAT('^(?:[a-z]*(?:[A-Z]|-)){', STR(?step1673), '}'), '')))), '[^-]', ''))) AS ?step2674) . BIND(((?step2674 + ?targetMotifMatchRegionMatchBeginPositionMF_01836664) - 1) AS ?thisPositionOn196) . BIND(?thisPositionOn196 AS ?thisPositionOn197) . BIND(?this AS ?pfs2t675) . BIND(URI(CONCAT(STR(?thisSequence), '#position', STR(?thisPositionOn196))) AS ?pfsb193) . BIND(URI(CONCAT(STR(?thisSequence), '#position', STR(?thisPositionOn197))) AS ?pfse194) . FILTER ((SUBSTR(?thisSequenceValue, ?thisPositionOn196, 1) = 'E')) . BIND(URI(CONCAT(STR(?this), '#MF_01836a192')) AS ?annotation192) . BIND(?this AS ?pfs191) . } OPTIONAL { ?this up:sequence ?thisSequence . ?thisSequence rdf:value ?thisSequenceValue . ?templateMotifMatch680 faldo:location ?templateMotifSequenceMatchRegionQ79PF4681 ; edam:is_output_of ?templateMotifSequenceProfileAlignmentOperationQ79PF4683 ; rdf:type edam:data_0869 ; rdf:value ?templateMotifCigarQ79PF4MF_01836676 . ?templateMotifSequenceMatchRegionQ79PF4681 faldo:begin ?templateMotifSequenceMatchBeginQ79PF4682 . ?templateMotifSequenceMatchBeginQ79PF4682 faldo:position ?templateMotifSequenceMatchBeginPositionQ79PF4677 ; faldo:reference isoform:Q79PF4-1 . ?templateMotifSequenceProfileAlignmentOperationQ79PF4683 edam:has_input signature:MF_01836 ; rdf:type edam:operation_0300 . ?targetMotifMatch684 faldo:location ?targetMotifMatchRegionMatch685 ; edam:is_output_of ?targetMotifSequenceAlignmentOperationMF_01836687 ; rdf:type edam:data_0869 ; rdf:value ?targetMotifMatchCigarQ79PF4MF_01836678 . ?targetMotifMatchRegionMatch685 faldo:begin ?targetMotifMatchRegionMatchBeginMF_01836686 . ?targetMotifMatchRegionMatchBeginMF_01836686 faldo:position ?targetMotifMatchRegionMatchBeginPositionMF_01836679 ; faldo:reference ?thisSequence . ?targetMotifSequenceAlignmentOperationMF_01836687 edam:has_input signature:MF_01836 ; rdf:type edam:operation_0300 . BIND(STRLEN(REPLACE(SUBSTR(?templateMotifCigarQ79PF4MF_01836676, 1, (STRLEN(?templateMotifCigarQ79PF4MF_01836676) - STRLEN(REPLACE(?templateMotifCigarQ79PF4MF_01836676, CONCAT('^(?:-*[^-]){', STR(((331 - ?templateMotifSequenceMatchBeginPositionQ79PF4677) + 1)), '}'), '')))), '[a-z]', '')) AS ?step1688) . BIND((STRLEN(SUBSTR(?targetMotifMatchCigarQ79PF4MF_01836678, 1, (STRLEN(?targetMotifMatchCigarQ79PF4MF_01836678) - STRLEN(REPLACE(?targetMotifMatchCigarQ79PF4MF_01836678, CONCAT('^(?:[a-z]*(?:[A-Z]|-)){', STR(?step1688), '}'), ''))))) - STRLEN(REPLACE(SUBSTR(?targetMotifMatchCigarQ79PF4MF_01836678, 1, (STRLEN(?targetMotifMatchCigarQ79PF4MF_01836678) - STRLEN(REPLACE(?targetMotifMatchCigarQ79PF4MF_01836678, CONCAT('^(?:[a-z]*(?:[A-Z]|-)){', STR(?step1688), '}'), '')))), '[^-]', ''))) AS ?step2689) . BIND(((?step2689 + ?targetMotifMatchRegionMatchBeginPositionMF_01836679) - 1) AS ?thisPositionOn203) . BIND(?thisPositionOn203 AS ?thisPositionOn204) . BIND(?this AS ?pfs2t690) . BIND(URI(CONCAT(STR(?thisSequence), '#position', STR(?thisPositionOn203))) AS ?pfsb200) . BIND(URI(CONCAT(STR(?thisSequence), '#position', STR(?thisPositionOn204))) AS ?pfse201) . FILTER ((SUBSTR(?thisSequenceValue, ?thisPositionOn203, 1) = 'W')) . BIND(URI(CONCAT(STR(?this), '#MF_01836a199')) AS ?annotation199) . BIND(?this AS ?pfs198) . } OPTIONAL { ?this up:sequence ?thisSequence . ?thisSequence rdf:value ?thisSequenceValue . ?templateMotifMatch695 faldo:location ?templateMotifSequenceMatchRegionQ79PF4696 ; edam:is_output_of ?templateMotifSequenceProfileAlignmentOperationQ79PF4698 ; rdf:type edam:data_0869 ; rdf:value ?templateMotifCigarQ79PF4MF_01836691 . ?templateMotifSequenceMatchRegionQ79PF4696 faldo:begin ?templateMotifSequenceMatchBeginQ79PF4697 . ?templateMotifSequenceMatchBeginQ79PF4697 faldo:position ?templateMotifSequenceMatchBeginPositionQ79PF4692 ; faldo:reference isoform:Q79PF4-1 . ?templateMotifSequenceProfileAlignmentOperationQ79PF4698 edam:has_input signature:MF_01836 ; rdf:type edam:operation_0300 . ?targetMotifMatch699 faldo:location ?targetMotifMatchRegionMatch700 ; edam:is_output_of ?targetMotifSequenceAlignmentOperationMF_01836702 ; rdf:type edam:data_0869 ; rdf:value ?targetMotifMatchCigarQ79PF4MF_01836693 . ?targetMotifMatchRegionMatch700 faldo:begin ?targetMotifMatchRegionMatchBeginMF_01836701 . ?targetMotifMatchRegionMatchBeginMF_01836701 faldo:position ?targetMotifMatchRegionMatchBeginPositionMF_01836694 ; faldo:reference ?thisSequence . ?targetMotifSequenceAlignmentOperationMF_01836702 edam:has_input signature:MF_01836 ; rdf:type edam:operation_0300 . BIND(STRLEN(REPLACE(SUBSTR(?templateMotifCigarQ79PF4MF_01836691, 1, (STRLEN(?templateMotifCigarQ79PF4MF_01836691) - STRLEN(REPLACE(?templateMotifCigarQ79PF4MF_01836691, CONCAT('^(?:-*[^-]){', STR(((451 - ?templateMotifSequenceMatchBeginPositionQ79PF4692) + 1)), '}'), '')))), '[a-z]', '')) AS ?step1703) . BIND((STRLEN(SUBSTR(?targetMotifMatchCigarQ79PF4MF_01836693, 1, (STRLEN(?targetMotifMatchCigarQ79PF4MF_01836693) - STRLEN(REPLACE(?targetMotifMatchCigarQ79PF4MF_01836693, CONCAT('^(?:[a-z]*(?:[A-Z]|-)){', STR(?step1703), '}'), ''))))) - STRLEN(REPLACE(SUBSTR(?targetMotifMatchCigarQ79PF4MF_01836693, 1, (STRLEN(?targetMotifMatchCigarQ79PF4MF_01836693) - STRLEN(REPLACE(?targetMotifMatchCigarQ79PF4MF_01836693, CONCAT('^(?:[a-z]*(?:[A-Z]|-)){', STR(?step1703), '}'), '')))), '[^-]', ''))) AS ?step2704) . BIND(((?step2704 + ?targetMotifMatchRegionMatchBeginPositionMF_01836694) - 1) AS ?thisPositionOn210) . BIND(?thisPositionOn210 AS ?thisPositionOn211) . BIND(?this AS ?pfs2t705) . BIND(URI(CONCAT(STR(?thisSequence), '#position', STR(?thisPositionOn210))) AS ?pfsb207) . BIND(URI(CONCAT(STR(?thisSequence), '#position', STR(?thisPositionOn211))) AS ?pfse208) . FILTER ((SUBSTR(?thisSequenceValue, ?thisPositionOn210, 1) = 'R')) . BIND(URI(CONCAT(STR(?this), '#MF_01836a206')) AS ?annotation206) . BIND(?this AS ?pfs205) . } OPTIONAL { ?this up:sequence ?thisSequence . ?thisSequence rdf:value ?thisSequenceValue . ?templateMotifMatch710 faldo:location ?templateMotifSequenceMatchRegionQ79PF4711 ; edam:is_output_of ?templateMotifSequenceProfileAlignmentOperationQ79PF4713 ; rdf:type edam:data_0869 ; rdf:value ?templateMotifCigarQ79PF4MF_01836706 . ?templateMotifSequenceMatchRegionQ79PF4711 faldo:begin ?templateMotifSequenceMatchBeginQ79PF4712 . ?templateMotifSequenceMatchBeginQ79PF4712 faldo:position ?templateMotifSequenceMatchBeginPositionQ79PF4707 ; faldo:reference isoform:Q79PF4-1 . ?templateMotifSequenceProfileAlignmentOperationQ79PF4713 edam:has_input signature:MF_01836 ; rdf:type edam:operation_0300 . ?targetMotifMatch714 faldo:location ?targetMotifMatchRegionMatch715 ; edam:is_output_of ?targetMotifSequenceAlignmentOperationMF_01836717 ; rdf:type edam:data_0869 ; rdf:value ?targetMotifMatchCigarQ79PF4MF_01836708 . ?targetMotifMatchRegionMatch715 faldo:begin ?targetMotifMatchRegionMatchBeginMF_01836716 . ?targetMotifMatchRegionMatchBeginMF_01836716 faldo:position ?targetMotifMatchRegionMatchBeginPositionMF_01836709 ; faldo:reference ?thisSequence . ?targetMotifSequenceAlignmentOperationMF_01836717 edam:has_input signature:MF_01836 ; rdf:type edam:operation_0300 . BIND(STRLEN(REPLACE(SUBSTR(?templateMotifCigarQ79PF4MF_01836706, 1, (STRLEN(?templateMotifCigarQ79PF4MF_01836706) - STRLEN(REPLACE(?templateMotifCigarQ79PF4MF_01836706, CONCAT('^(?:-*[^-]){', STR(((457 - ?templateMotifSequenceMatchBeginPositionQ79PF4707) + 1)), '}'), '')))), '[a-z]', '')) AS ?step1718) . BIND((STRLEN(SUBSTR(?targetMotifMatchCigarQ79PF4MF_01836708, 1, (STRLEN(?targetMotifMatchCigarQ79PF4MF_01836708) - STRLEN(REPLACE(?targetMotifMatchCigarQ79PF4MF_01836708, CONCAT('^(?:[a-z]*(?:[A-Z]|-)){', STR(?step1718), '}'), ''))))) - STRLEN(REPLACE(SUBSTR(?targetMotifMatchCigarQ79PF4MF_01836708, 1, (STRLEN(?targetMotifMatchCigarQ79PF4MF_01836708) - STRLEN(REPLACE(?targetMotifMatchCigarQ79PF4MF_01836708, CONCAT('^(?:[a-z]*(?:[A-Z]|-)){', STR(?step1718), '}'), '')))), '[^-]', ''))) AS ?step2719) . BIND(((?step2719 + ?targetMotifMatchRegionMatchBeginPositionMF_01836709) - 1) AS ?thisPositionOn217) . BIND(?thisPositionOn217 AS ?thisPositionOn218) . BIND(?this AS ?pfs2t720) . BIND(URI(CONCAT(STR(?thisSequence), '#position', STR(?thisPositionOn217))) AS ?pfsb214) . BIND(URI(CONCAT(STR(?thisSequence), '#position', STR(?thisPositionOn218))) AS ?pfse215) . FILTER ((SUBSTR(?thisSequenceValue, ?thisPositionOn217, 1) = 'K')) . BIND(URI(CONCAT(STR(?this), '#MF_01836a213')) AS ?annotation213) . BIND(?this AS ?pfs212) . } OPTIONAL { ?this up:sequence ?thisSequence . ?thisSequence rdf:value ?thisSequenceValue . ?templateMotifMatch725 faldo:location ?templateMotifSequenceMatchRegionQ79PF4726 ; edam:is_output_of ?templateMotifSequenceProfileAlignmentOperationQ79PF4728 ; rdf:type edam:data_0869 ; rdf:value ?templateMotifCigarQ79PF4MF_01836721 . ?templateMotifSequenceMatchRegionQ79PF4726 faldo:begin ?templateMotifSequenceMatchBeginQ79PF4727 . ?templateMotifSequenceMatchBeginQ79PF4727 faldo:position ?templateMotifSequenceMatchBeginPositionQ79PF4722 ; faldo:reference isoform:Q79PF4-1 . ?templateMotifSequenceProfileAlignmentOperationQ79PF4728 edam:has_input signature:MF_01836 ; rdf:type edam:operation_0300 . ?targetMotifMatch729 faldo:location ?targetMotifMatchRegionMatch730 ; edam:is_output_of ?targetMotifSequenceAlignmentOperationMF_01836732 ; rdf:type edam:data_0869 ; rdf:value ?targetMotifMatchCigarQ79PF4MF_01836723 . ?targetMotifMatchRegionMatch730 faldo:begin ?targetMotifMatchRegionMatchBeginMF_01836731 . ?targetMotifMatchRegionMatchBeginMF_01836731 faldo:position ?targetMotifMatchRegionMatchBeginPositionMF_01836724 ; faldo:reference ?thisSequence . ?targetMotifSequenceAlignmentOperationMF_01836732 edam:has_input signature:MF_01836 ; rdf:type edam:operation_0300 . BIND(STRLEN(REPLACE(SUBSTR(?templateMotifCigarQ79PF4MF_01836721, 1, (STRLEN(?templateMotifCigarQ79PF4MF_01836721) - STRLEN(REPLACE(?templateMotifCigarQ79PF4MF_01836721, CONCAT('^(?:-*[^-]){', STR(((458 - ?templateMotifSequenceMatchBeginPositionQ79PF4722) + 1)), '}'), '')))), '[a-z]', '')) AS ?step1733) . BIND((STRLEN(SUBSTR(?targetMotifMatchCigarQ79PF4MF_01836723, 1, (STRLEN(?targetMotifMatchCigarQ79PF4MF_01836723) - STRLEN(REPLACE(?targetMotifMatchCigarQ79PF4MF_01836723, CONCAT('^(?:[a-z]*(?:[A-Z]|-)){', STR(?step1733), '}'), ''))))) - STRLEN(REPLACE(SUBSTR(?targetMotifMatchCigarQ79PF4MF_01836723, 1, (STRLEN(?targetMotifMatchCigarQ79PF4MF_01836723) - STRLEN(REPLACE(?targetMotifMatchCigarQ79PF4MF_01836723, CONCAT('^(?:[a-z]*(?:[A-Z]|-)){', STR(?step1733), '}'), '')))), '[^-]', ''))) AS ?step2734) . BIND(((?step2734 + ?targetMotifMatchRegionMatchBeginPositionMF_01836724) - 1) AS ?thisPositionOn224) . BIND(?thisPositionOn224 AS ?thisPositionOn225) . BIND(?this AS ?pfs2t735) . BIND(URI(CONCAT(STR(?thisSequence), '#position', STR(?thisPositionOn224))) AS ?pfsb221) . BIND(URI(CONCAT(STR(?thisSequence), '#position', STR(?thisPositionOn225))) AS ?pfse222) . FILTER ((SUBSTR(?thisSequenceValue, ?thisPositionOn224, 1) = 'M')) . BIND(URI(CONCAT(STR(?this), '#MF_01836a220')) AS ?annotation220) . BIND(?this AS ?pfs219) . } OPTIONAL { ?this up:sequence ?thisSequence . ?thisSequence rdf:value ?thisSequenceValue . ?templateMotifMatch740 faldo:location ?templateMotifSequenceMatchRegionQ79PF4741 ; edam:is_output_of ?templateMotifSequenceProfileAlignmentOperationQ79PF4743 ; rdf:type edam:data_0869 ; rdf:value ?templateMotifCigarQ79PF4MF_01836736 . ?templateMotifSequenceMatchRegionQ79PF4741 faldo:begin ?templateMotifSequenceMatchBeginQ79PF4742 . ?templateMotifSequenceMatchBeginQ79PF4742 faldo:position ?templateMotifSequenceMatchBeginPositionQ79PF4737 ; faldo:reference isoform:Q79PF4-1 . ?templateMotifSequenceProfileAlignmentOperationQ79PF4743 edam:has_input signature:MF_01836 ; rdf:type edam:operation_0300 . ?targetMotifMatch744 faldo:location ?targetMotifMatchRegionMatch745 ; edam:is_output_of ?targetMotifSequenceAlignmentOperationMF_01836747 ; rdf:type edam:data_0869 ; rdf:value ?targetMotifMatchCigarQ79PF4MF_01836738 . ?targetMotifMatchRegionMatch745 faldo:begin ?targetMotifMatchRegionMatchBeginMF_01836746 . ?targetMotifMatchRegionMatchBeginMF_01836746 faldo:position ?targetMotifMatchRegionMatchBeginPositionMF_01836739 ; faldo:reference ?thisSequence . ?targetMotifSequenceAlignmentOperationMF_01836747 edam:has_input signature:MF_01836 ; rdf:type edam:operation_0300 . BIND(STRLEN(REPLACE(SUBSTR(?templateMotifCigarQ79PF4MF_01836736, 1, (STRLEN(?templateMotifCigarQ79PF4MF_01836736) - STRLEN(REPLACE(?templateMotifCigarQ79PF4MF_01836736, CONCAT('^(?:-*[^-]){', STR(((459 - ?templateMotifSequenceMatchBeginPositionQ79PF4737) + 1)), '}'), '')))), '[a-z]', '')) AS ?step1748) . BIND((STRLEN(SUBSTR(?targetMotifMatchCigarQ79PF4MF_01836738, 1, (STRLEN(?targetMotifMatchCigarQ79PF4MF_01836738) - STRLEN(REPLACE(?targetMotifMatchCigarQ79PF4MF_01836738, CONCAT('^(?:[a-z]*(?:[A-Z]|-)){', STR(?step1748), '}'), ''))))) - STRLEN(REPLACE(SUBSTR(?targetMotifMatchCigarQ79PF4MF_01836738, 1, (STRLEN(?targetMotifMatchCigarQ79PF4MF_01836738) - STRLEN(REPLACE(?targetMotifMatchCigarQ79PF4MF_01836738, CONCAT('^(?:[a-z]*(?:[A-Z]|-)){', STR(?step1748), '}'), '')))), '[^-]', ''))) AS ?step2749) . BIND(((?step2749 + ?targetMotifMatchRegionMatchBeginPositionMF_01836739) - 1) AS ?thisPositionOn231) . BIND(?thisPositionOn231 AS ?thisPositionOn232) . BIND(?this AS ?pfs2t750) . BIND(URI(CONCAT(STR(?thisSequence), '#position', STR(?thisPositionOn231))) AS ?pfsb228) . BIND(URI(CONCAT(STR(?thisSequence), '#position', STR(?thisPositionOn232))) AS ?pfse229) . FILTER ((SUBSTR(?thisSequenceValue, ?thisPositionOn231, 1) = 'R')) . BIND(URI(CONCAT(STR(?this), '#MF_01836a227')) AS ?annotation227) . BIND(?this AS ?pfs226) . } OPTIONAL { ?this up:sequence ?thisSequence . ?thisSequence rdf:value ?thisSequenceValue . ?templateMotifMatch755 faldo:location ?templateMotifSequenceMatchRegionQ79PF4756 ; edam:is_output_of ?templateMotifSequenceProfileAlignmentOperationQ79PF4758 ; rdf:type edam:data_0869 ; rdf:value ?templateMotifCigarQ79PF4MF_01836751 . ?templateMotifSequenceMatchRegionQ79PF4756 faldo:begin ?templateMotifSequenceMatchBeginQ79PF4757 . ?templateMotifSequenceMatchBeginQ79PF4757 faldo:position ?templateMotifSequenceMatchBeginPositionQ79PF4752 ; faldo:reference isoform:Q79PF4-1 . ?templateMotifSequenceProfileAlignmentOperationQ79PF4758 edam:has_input signature:MF_01836 ; rdf:type edam:operation_0300 . ?targetMotifMatch759 faldo:location ?targetMotifMatchRegionMatch760 ; edam:is_output_of ?targetMotifSequenceAlignmentOperationMF_01836762 ; rdf:type edam:data_0869 ; rdf:value ?targetMotifMatchCigarQ79PF4MF_01836753 . ?targetMotifMatchRegionMatch760 faldo:begin ?targetMotifMatchRegionMatchBeginMF_01836761 . ?targetMotifMatchRegionMatchBeginMF_01836761 faldo:position ?targetMotifMatchRegionMatchBeginPositionMF_01836754 ; faldo:reference ?thisSequence . ?targetMotifSequenceAlignmentOperationMF_01836762 edam:has_input signature:MF_01836 ; rdf:type edam:operation_0300 . BIND(STRLEN(REPLACE(SUBSTR(?templateMotifCigarQ79PF4MF_01836751, 1, (STRLEN(?templateMotifCigarQ79PF4MF_01836751) - STRLEN(REPLACE(?templateMotifCigarQ79PF4MF_01836751, CONCAT('^(?:-*[^-]){', STR(((461 - ?templateMotifSequenceMatchBeginPositionQ79PF4752) + 1)), '}'), '')))), '[a-z]', '')) AS ?step1763) . BIND((STRLEN(SUBSTR(?targetMotifMatchCigarQ79PF4MF_01836753, 1, (STRLEN(?targetMotifMatchCigarQ79PF4MF_01836753) - STRLEN(REPLACE(?targetMotifMatchCigarQ79PF4MF_01836753, CONCAT('^(?:[a-z]*(?:[A-Z]|-)){', STR(?step1763), '}'), ''))))) - STRLEN(REPLACE(SUBSTR(?targetMotifMatchCigarQ79PF4MF_01836753, 1, (STRLEN(?targetMotifMatchCigarQ79PF4MF_01836753) - STRLEN(REPLACE(?targetMotifMatchCigarQ79PF4MF_01836753, CONCAT('^(?:[a-z]*(?:[A-Z]|-)){', STR(?step1763), '}'), '')))), '[^-]', ''))) AS ?step2764) . BIND(((?step2764 + ?targetMotifMatchRegionMatchBeginPositionMF_01836754) - 1) AS ?thisPositionOn238) . BIND(?thisPositionOn238 AS ?thisPositionOn239) . BIND(?this AS ?pfs2t765) . BIND(URI(CONCAT(STR(?thisSequence), '#position', STR(?thisPositionOn238))) AS ?pfsb235) . BIND(URI(CONCAT(STR(?thisSequence), '#position', STR(?thisPositionOn239))) AS ?pfse236) . FILTER ((SUBSTR(?thisSequenceValue, ?thisPositionOn238, 1) = 'S')) . BIND(URI(CONCAT(STR(?this), '#MF_01836a234')) AS ?annotation234) . BIND(?this AS ?pfs233) . } OPTIONAL { ?this up:sequence ?thisSequence . ?thisSequence rdf:value ?thisSequenceValue . ?templateMotifMatch770 faldo:location ?templateMotifSequenceMatchRegionQ79PF4771 ; edam:is_output_of ?templateMotifSequenceProfileAlignmentOperationQ79PF4773 ; rdf:type edam:data_0869 ; rdf:value ?templateMotifCigarQ79PF4MF_01836766 . ?templateMotifSequenceMatchRegionQ79PF4771 faldo:begin ?templateMotifSequenceMatchBeginQ79PF4772 . ?templateMotifSequenceMatchBeginQ79PF4772 faldo:position ?templateMotifSequenceMatchBeginPositionQ79PF4767 ; faldo:reference isoform:Q79PF4-1 . ?templateMotifSequenceProfileAlignmentOperationQ79PF4773 edam:has_input signature:MF_01836 ; rdf:type edam:operation_0300 . ?targetMotifMatch774 faldo:location ?targetMotifMatchRegionMatch775 ; edam:is_output_of ?targetMotifSequenceAlignmentOperationMF_01836777 ; rdf:type edam:data_0869 ; rdf:value ?targetMotifMatchCigarQ79PF4MF_01836768 . ?targetMotifMatchRegionMatch775 faldo:begin ?targetMotifMatchRegionMatchBeginMF_01836776 . ?targetMotifMatchRegionMatchBeginMF_01836776 faldo:position ?targetMotifMatchRegionMatchBeginPositionMF_01836769 ; faldo:reference ?thisSequence . ?targetMotifSequenceAlignmentOperationMF_01836777 edam:has_input signature:MF_01836 ; rdf:type edam:operation_0300 . BIND(STRLEN(REPLACE(SUBSTR(?templateMotifCigarQ79PF4MF_01836766, 1, (STRLEN(?templateMotifCigarQ79PF4MF_01836766) - STRLEN(REPLACE(?templateMotifCigarQ79PF4MF_01836766, CONCAT('^(?:-*[^-]){', STR(((463 - ?templateMotifSequenceMatchBeginPositionQ79PF4767) + 1)), '}'), '')))), '[a-z]', '')) AS ?step1778) . BIND((STRLEN(SUBSTR(?targetMotifMatchCigarQ79PF4MF_01836768, 1, (STRLEN(?targetMotifMatchCigarQ79PF4MF_01836768) - STRLEN(REPLACE(?targetMotifMatchCigarQ79PF4MF_01836768, CONCAT('^(?:[a-z]*(?:[A-Z]|-)){', STR(?step1778), '}'), ''))))) - STRLEN(REPLACE(SUBSTR(?targetMotifMatchCigarQ79PF4MF_01836768, 1, (STRLEN(?targetMotifMatchCigarQ79PF4MF_01836768) - STRLEN(REPLACE(?targetMotifMatchCigarQ79PF4MF_01836768, CONCAT('^(?:[a-z]*(?:[A-Z]|-)){', STR(?step1778), '}'), '')))), '[^-]', ''))) AS ?step2779) . BIND(((?step2779 + ?targetMotifMatchRegionMatchBeginPositionMF_01836769) - 1) AS ?thisPositionOn245) . BIND(?thisPositionOn245 AS ?thisPositionOn246) . BIND(?this AS ?pfs2t780) . BIND(URI(CONCAT(STR(?thisSequence), '#position', STR(?thisPositionOn245))) AS ?pfsb242) . BIND(URI(CONCAT(STR(?thisSequence), '#position', STR(?thisPositionOn246))) AS ?pfse243) . FILTER ((SUBSTR(?thisSequenceValue, ?thisPositionOn245, 1) = 'H')) . BIND(URI(CONCAT(STR(?this), '#MF_01836a241')) AS ?annotation241) . BIND(?this AS ?pfs240) . } OPTIONAL { ?this up:sequence ?thisSequence . ?thisSequence rdf:value ?thisSequenceValue . ?templateMotifMatch785 faldo:location ?templateMotifSequenceMatchRegionQ79PF4786 ; edam:is_output_of ?templateMotifSequenceProfileAlignmentOperationQ79PF4788 ; rdf:type edam:data_0869 ; rdf:value ?templateMotifCigarQ79PF4MF_01836781 . ?templateMotifSequenceMatchRegionQ79PF4786 faldo:begin ?templateMotifSequenceMatchBeginQ79PF4787 . ?templateMotifSequenceMatchBeginQ79PF4787 faldo:position ?templateMotifSequenceMatchBeginPositionQ79PF4782 ; faldo:reference isoform:Q79PF4-1 . ?templateMotifSequenceProfileAlignmentOperationQ79PF4788 edam:has_input signature:MF_01836 ; rdf:type edam:operation_0300 . ?targetMotifMatch789 faldo:location ?targetMotifMatchRegionMatch790 ; edam:is_output_of ?targetMotifSequenceAlignmentOperationMF_01836792 ; rdf:type edam:data_0869 ; rdf:value ?targetMotifMatchCigarQ79PF4MF_01836783 . ?targetMotifMatchRegionMatch790 faldo:begin ?targetMotifMatchRegionMatchBeginMF_01836791 . ?targetMotifMatchRegionMatchBeginMF_01836791 faldo:position ?targetMotifMatchRegionMatchBeginPositionMF_01836784 ; faldo:reference ?thisSequence . ?targetMotifSequenceAlignmentOperationMF_01836792 edam:has_input signature:MF_01836 ; rdf:type edam:operation_0300 . BIND(STRLEN(REPLACE(SUBSTR(?templateMotifCigarQ79PF4MF_01836781, 1, (STRLEN(?templateMotifCigarQ79PF4MF_01836781) - STRLEN(REPLACE(?templateMotifCigarQ79PF4MF_01836781, CONCAT('^(?:-*[^-]){', STR(((465 - ?templateMotifSequenceMatchBeginPositionQ79PF4782) + 1)), '}'), '')))), '[a-z]', '')) AS ?step1793) . BIND((STRLEN(SUBSTR(?targetMotifMatchCigarQ79PF4MF_01836783, 1, (STRLEN(?targetMotifMatchCigarQ79PF4MF_01836783) - STRLEN(REPLACE(?targetMotifMatchCigarQ79PF4MF_01836783, CONCAT('^(?:[a-z]*(?:[A-Z]|-)){', STR(?step1793), '}'), ''))))) - STRLEN(REPLACE(SUBSTR(?targetMotifMatchCigarQ79PF4MF_01836783, 1, (STRLEN(?targetMotifMatchCigarQ79PF4MF_01836783) - STRLEN(REPLACE(?targetMotifMatchCigarQ79PF4MF_01836783, CONCAT('^(?:[a-z]*(?:[A-Z]|-)){', STR(?step1793), '}'), '')))), '[^-]', ''))) AS ?step2794) . BIND(((?step2794 + ?targetMotifMatchRegionMatchBeginPositionMF_01836784) - 1) AS ?thisPositionOn252) . BIND(?thisPositionOn252 AS ?thisPositionOn253) . BIND(?this AS ?pfs2t795) . BIND(URI(CONCAT(STR(?thisSequence), '#position', STR(?thisPositionOn252))) AS ?pfsb249) . BIND(URI(CONCAT(STR(?thisSequence), '#position', STR(?thisPositionOn253))) AS ?pfse250) . FILTER ((SUBSTR(?thisSequenceValue, ?thisPositionOn252, 1) = 'K')) . BIND(URI(CONCAT(STR(?this), '#MF_01836a248')) AS ?annotation248) . BIND(?this AS ?pfs247) . } OPTIONAL { ?this a up:Protein . BIND(?this AS ?caseWithTag796) . } BIND(IF(BOUND(?tagphospho), ?caseWithTag796, ?UNBOUND_VARIABLE) AS ?case3) . OPTIONAL { ?this a up:Protein . ?this up:organism ?thisOrganism . ?thisOrganism rdfs:subClassOf+ taxon:1218 . BIND(?this AS ?case4) . } OPTIONAL { ?this a up:Protein . ?this up:organism ?thisOrganism . FILTER (! (EXISTS { ?thisOrganism rdfs:subClassOf+ taxon:1218 . })) . BIND(?this AS ?case5) . } }