CONSTRUCT { _:686548 up:source unirule:MF_01976 . _:686549 up:source unirule:MF_01976 . _:686550 up:source unirule:MF_01976 . _:686551 up:source unirule:MF_01976 . _:686552 up:source unirule:MF_01976 . _:686553 up:source unirule:MF_01976 . _:686554 up:source unirule:MF_01976 . _:686555 up:source unirule:MF_01976 . _:686556 up:source unirule:MF_01976 . _:686557 up:source unirule:MF_01976 . _:686558 up:source unirule:MF_01976 . _:686559 up:source unirule:MF_01976 . _:686560 up:source unirule:MF_01976 . _:686561 up:source unirule:MF_01976 . _:686562 up:source unirule:MF_01976 . _:686563 up:source unirule:MF_01976 . _:686564 up:source unirule:MF_01976 . _:686565 up:source unirule:MF_01976 . _:686566 up:source unirule:MF_01976 . _:686567 up:source unirule:MF_01976 . _:686568 up:source unirule:MF_01976 . _:686569 up:source unirule:MF_01976 . _:686570 up:source unirule:MF_01976 . _:686571 up:source unirule:MF_01976 . _:686572 up:source unirule:MF_01976 . _:686573 up:source unirule:MF_01976 . _:686574 up:source unirule:MF_01976 . _:686575 up:source unirule:MF_01976 . _:686576 up:source unirule:MF_01976 . _:686577 up:source unirule:MF_01976 . _:686578 up:source unirule:MF_01976 . _:686579 up:source unirule:MF_01976 . _:686580 up:source unirule:MF_01976 . _:686581 up:source unirule:MF_01976 . _:686582 up:source unirule:MF_01976 . _:686583 up:source unirule:MF_01976 . _:686584 up:source unirule:MF_01976 . _:686585 up:source unirule:MF_01976 . ?this up:annotation ?annotation0 , ?annotation1 , ?annotation2 , ?annotation3 , ?annotation5 ; up:classifiedWith GO:0003872 , GO:0005737 , GO:0006096 , keyword:324 , keyword:418 , keyword:460 , keyword:479 , keyword:808 , keyword:963 . ?annotation0 up:cofactor chebi:18420 ; rdf:type up:Cofactor_Annotation . ?annotation1 a up:Pathway_Annotation ; rdfs:comment 'Carbohydrate degradation; glycolysis; D-glyceraldehyde 3-phosphate and glycerone phosphate from D-glucose: step 3/4.' . ?annotation2 a up:Subunit_Annotation ; rdfs:comment 'Homodimer or homotetramer.' . ?annotation3 a up:Subcellular_Location_Annotation . ?annotation3li4 up:cellularComponent <http://purl.uniprot.org/locations/null>. ?annotation5 a up:Similarity_Annotation ; rdfs:comment 'Belongs to the phosphofructokinase type A (PFKA) family. Mixed-substrate PFK group III subfamily.' . ?case6 up:classifiedWith keyword:547 , keyword:67 . ?case7 up:alternativeName ?name9 , ?name10 , ?name11 ; up:recommendedName ?name8 . ?name8 up:ecName '2.7.1.90' ; up:fullName 'Pyrophosphate--fructose 6-phosphate 1-phosphotransferase' ; rdf:type up:Structured_Name . ?name9 up:fullName '6-phosphofructokinase, pyrophosphate dependent' ; rdf:type up:Structured_Name . ?name10 up:fullName 'PPi-dependent phosphofructokinase' ; up:shortName 'PPi-PFK' ; rdf:type up:Structured_Name . ?name11 up:fullName 'Pyrophosphate-dependent 6-phosphofructose-1-kinase' ; rdf:type up:Structured_Name . ?case12 up:alternativeName ?name14 ; up:recommendedName ?name13 . ?name13 up:ecName '2.7.1.11' ; up:fullName 'ATP-dependent 6-phosphofructokinase' ; up:shortName 'ATP-PFK' , 'Phosphofructokinase' ; rdf:type up:Structured_Name . ?name14 up:fullName 'Phosphohexokinase' ; rdf:type up:Structured_Name . ?case15 up:recommendedName ?name16 . ?name16 up:ecName '2.7.1.-' ; up:fullName '6-phosphofructokinase' ; rdf:type up:Structured_Name . ?pfs17 up:annotation ?annotation18 . ?annotation18 faldo:begin ?pfsb19 ; faldo:end ?pfse20 ; rdf:type up:Site_Annotation ; rdfs:comment 'Important for substrate specificity; cannot use PPi as phosphoryl donor' . ?pfsb19 faldo:position ?thisPositionOn21 ; rdf:type faldo:ExactPosition . ?pfse20 faldo:position ?thisPositionOn22 ; rdf:type faldo:ExactPosition . ?pfs23 up:annotation ?annotation24 . ?annotation24 faldo:begin ?pfsb25 ; faldo:end ?pfse26 ; rdf:type up:Site_Annotation ; rdfs:comment 'Important for catalytic activity and substrate specificity; stabilizes the transition state when the phosphoryl donor is PPi; prevents ATP from binding by mimicking the alpha-phosphate group of ATP' . ?pfsb25 faldo:position ?thisPositionOn27 ; rdf:type faldo:ExactPosition . ?pfse26 faldo:position ?thisPositionOn28 ; rdf:type faldo:ExactPosition . ?pfs29 up:annotation ?annotation30 . ?annotation30 faldo:begin ?pfsb31 ; faldo:end ?pfse32 ; up:ligand ?ligand33 ; rdf:type up:Binding_Site_Annotation ; rdfs:comment 'in other chain' . ?pfsb31 faldo:position ?thisPositionOn35 ; rdf:type faldo:ExactPosition . ?pfse32 faldo:position ?thisPositionOn36 ; rdf:type faldo:ExactPosition . ?ligand33 rdfs:subClassOf ?molecule34 . ?molecule34 rdfs:label 'substrate' . ?pfs37 up:annotation ?annotation38 . ?annotation38 faldo:begin ?pfsb39 ; faldo:end ?pfse40 ; up:ligand ?ligand41 ; rdf:type up:Binding_Site_Annotation ; rdfs:comment 'in other chain' . ?pfsb39 faldo:position ?thisPositionOn43 ; rdf:type faldo:ExactPosition . ?pfse40 faldo:position ?thisPositionOn44 ; rdf:type faldo:ExactPosition . ?ligand41 rdfs:subClassOf ?molecule42 . ?molecule42 rdfs:label 'substrate' . ?pfs45 up:annotation ?annotation46 . ?annotation46 faldo:begin ?pfsb47 ; faldo:end ?pfse48 ; up:ligand ?ligand49 ; rdf:type up:Binding_Site_Annotation ; rdfs:comment 'in other chain' . ?pfsb47 faldo:position ?thisPositionOn51 ; rdf:type faldo:ExactPosition . ?pfse48 faldo:position ?thisPositionOn52 ; rdf:type faldo:ExactPosition . ?ligand49 rdfs:subClassOf ?molecule50 . ?molecule50 rdfs:label 'substrate' . ?pfs53 up:annotation ?annotation54 . ?annotation54 faldo:begin ?pfsb55 ; faldo:end ?pfse56 ; rdf:type up:Active_Site_Annotation ; rdfs:comment 'Proton acceptor' . ?pfsb55 faldo:position ?thisPositionOn57 ; rdf:type faldo:ExactPosition . ?pfse56 faldo:position ?thisPositionOn58 ; rdf:type faldo:ExactPosition . ?pfs59 up:annotation ?annotation60 . ?annotation60 faldo:begin ?pfsb61 ; faldo:end ?pfse62 ; up:ligand ?ligand63 ; rdf:type up:Binding_Site_Annotation . ?pfsb61 faldo:position ?thisPositionOn64 ; rdf:type faldo:ExactPosition . ?pfse62 faldo:position ?thisPositionOn65 ; rdf:type faldo:ExactPosition . ?ligand63 rdfs:subClassOf chebi:18420 . ?pfs66 up:annotation ?annotation67 . ?annotation67 faldo:begin ?pfsb68 ; faldo:end ?pfse69 ; up:ligand ?ligand70 ; rdf:type up:Binding_Site_Annotation . ?pfsb68 faldo:position ?thisPositionOn72 ; rdf:type faldo:ExactPosition . ?pfse69 faldo:position ?thisPositionOn73 ; rdf:type faldo:ExactPosition . ?ligand70 rdfs:subClassOf ?molecule71 . ?molecule71 rdfs:label 'substrate' . ?pfs74 up:annotation ?annotation75 . ?annotation75 faldo:begin ?pfsb76 ; faldo:end ?pfse77 ; up:ligand ?ligand78 ; rdf:type up:Binding_Site_Annotation ; rdfs:comment 'in other chain' . ?pfsb76 faldo:position ?thisPositionOn80 ; rdf:type faldo:ExactPosition . ?pfse77 faldo:position ?thisPositionOn81 ; rdf:type faldo:ExactPosition . ?ligand78 rdfs:subClassOf ?molecule79 . ?molecule79 rdfs:label 'substrate' . ?pfs82 up:annotation ?annotation83 . ?annotation83 faldo:begin ?pfsb84 ; faldo:end ?pfse85 ; up:ligand ?ligand86 ; rdf:type up:Binding_Site_Annotation . ?pfsb84 faldo:position ?thisPositionOn88 ; rdf:type faldo:ExactPosition . ?pfse85 faldo:position ?thisPositionOn89 ; rdf:type faldo:ExactPosition . ?ligand86 rdfs:subClassOf ?molecule87 . ?molecule87 rdfs:label 'substrate' . ?pfs90 up:annotation ?annotation91 . ?annotation91 faldo:begin ?pfsb92 ; faldo:end ?pfse93 ; up:ligand ?ligand94 ; rdf:type up:Binding_Site_Annotation . ?pfsb92 faldo:position ?thisPositionOn95 ; rdf:type faldo:ExactPosition . ?pfse93 faldo:position ?thisPositionOn96 ; rdf:type faldo:ExactPosition . ?ligand94 rdfs:subClassOf chebi:30616 . ?pfs97 up:annotation ?annotation98 . ?annotation98 faldo:begin ?pfsb99 ; faldo:end ?pfse100 ; up:ligand ?ligand101 ; rdf:type up:Binding_Site_Annotation . ?pfsb99 faldo:position ?thisPositionOn102 ; rdf:type faldo:ExactPosition . ?pfse100 faldo:position ?thisPositionOn103 ; rdf:type faldo:ExactPosition . ?ligand101 rdfs:subClassOf chebi:30616 . ?pfs104 up:annotation ?annotation105 . ?annotation105 faldo:begin ?pfsb106 ; faldo:end ?pfse107 ; up:ligand ?ligand108 ; rdf:type up:Binding_Site_Annotation . ?pfsb106 faldo:position ?thisPositionOn109 ; rdf:type faldo:ExactPosition . ?pfse107 faldo:position ?thisPositionOn110 ; rdf:type faldo:ExactPosition . ?ligand108 rdfs:subClassOf chebi:30616 . ?pfs111 up:annotation ?annotation112 . ?annotation112 faldo:begin ?pfsb113 ; faldo:end ?pfse114 ; up:ligand ?ligand115 ; rdf:type up:Binding_Site_Annotation . ?pfsb113 faldo:position ?thisPositionOn116 ; rdf:type faldo:ExactPosition . ?pfse114 faldo:position ?thisPositionOn117 ; rdf:type faldo:ExactPosition . ?ligand115 rdfs:subClassOf chebi:33019 . ?pfs118 up:annotation ?annotation119 . ?annotation119 faldo:begin ?pfsb120 ; faldo:end ?pfse121 ; rdf:type up:Site_Annotation ; rdfs:comment 'Important for catalytic activity; stabilizes the transition state when the phosphoryl donor is PPi' . ?pfsb120 faldo:position ?thisPositionOn122 ; rdf:type faldo:ExactPosition . ?pfse121 faldo:position ?thisPositionOn123 ; rdf:type faldo:ExactPosition . _:686586 a rdf:Statement ; up:attribution _:686548 ; rdf:subject ?this ; rdf:predicate up:annotation ; rdf:object ?annotation0 . _:686587 a rdf:Statement ; up:attribution _:686549 ; rdf:subject ?this ; rdf:predicate up:annotation ; rdf:object ?annotation1 . _:686588 a rdf:Statement ; up:attribution _:686550 ; rdf:subject ?this ; rdf:predicate up:annotation ; rdf:object ?annotation2 . _:686589 a rdf:Statement ; up:attribution _:686551 ; rdf:subject ?this ; rdf:predicate up:annotation ; rdf:object ?annotation3 . _:686590 a rdf:Statement ; up:attribution _:686552 ; rdf:subject ?this ; rdf:predicate up:annotation ; rdf:object ?annotation5 . _:686591 a rdf:Statement ; up:attribution _:686553 ; rdf:subject ?this ; rdf:predicate up:classifiedWith ; rdf:object keyword:963 . _:686592 a rdf:Statement ; up:attribution _:686554 ; rdf:subject ?this ; rdf:predicate up:classifiedWith ; rdf:object keyword:418 . _:686593 a rdf:Statement ; up:attribution _:686555 ; rdf:subject ?this ; rdf:predicate up:classifiedWith ; rdf:object keyword:808 . _:686594 a rdf:Statement ; up:attribution _:686556 ; rdf:subject ?this ; rdf:predicate up:classifiedWith ; rdf:object keyword:324 . _:686595 a rdf:Statement ; up:attribution _:686557 ; rdf:subject ?this ; rdf:predicate up:classifiedWith ; rdf:object keyword:460 . _:686596 a rdf:Statement ; up:attribution _:686558 ; rdf:subject ?this ; rdf:predicate up:classifiedWith ; rdf:object keyword:479 . _:686597 a rdf:Statement ; up:attribution _:686559 ; rdf:subject ?this ; rdf:predicate up:classifiedWith ; rdf:object GO:0003872 . _:686598 a rdf:Statement ; up:attribution _:686560 ; rdf:subject ?this ; rdf:predicate up:classifiedWith ; rdf:object GO:0006096 . _:686599 a rdf:Statement ; up:attribution _:686561 ; rdf:subject ?this ; rdf:predicate up:classifiedWith ; rdf:object GO:0005737 . _:686600 a rdf:Statement ; up:attribution _:686562 ; rdf:subject ?case6 ; rdf:predicate up:classifiedWith ; rdf:object keyword:67 . _:686601 a rdf:Statement ; up:attribution _:686563 ; rdf:subject ?case6 ; rdf:predicate up:classifiedWith ; rdf:object keyword:547 . _:686602 a rdf:Statement ; up:attribution _:686564 ; rdf:subject ?case7 ; rdf:predicate up:recommendedName ; rdf:object ?name8 . _:686603 a rdf:Statement ; up:attribution _:686565 ; rdf:subject ?case7 ; rdf:predicate up:alternativeName ; rdf:object ?name9 . _:686604 a rdf:Statement ; up:attribution _:686566 ; rdf:subject ?case7 ; rdf:predicate up:alternativeName ; rdf:object ?name10 . _:686605 a rdf:Statement ; up:attribution _:686567 ; rdf:subject ?case7 ; rdf:predicate up:alternativeName ; rdf:object ?name11 . _:686606 a rdf:Statement ; up:attribution _:686568 ; rdf:subject ?case12 ; rdf:predicate up:recommendedName ; rdf:object ?name13 . _:686607 a rdf:Statement ; up:attribution _:686569 ; rdf:subject ?case12 ; rdf:predicate up:alternativeName ; rdf:object ?name14 . _:686608 a rdf:Statement ; up:attribution _:686570 ; rdf:subject ?case15 ; rdf:predicate up:recommendedName ; rdf:object ?name16 . _:686609 a rdf:Statement ; up:source unirule:MF_01976 ; rdf:subject ?pfs17 ; rdf:predicate up:annotation ; rdf:object ?annotation18 . _:686610 a rdf:Statement ; up:attribution _:686571 ; rdf:subject ?pfs17 ; rdf:predicate up:annotation ; rdf:object ?annotation18 . _:686611 a rdf:Statement ; up:source unirule:MF_01976 ; rdf:subject ?pfs23 ; rdf:predicate up:annotation ; rdf:object ?annotation24 . _:686612 a rdf:Statement ; up:attribution _:686572 ; rdf:subject ?pfs23 ; rdf:predicate up:annotation ; rdf:object ?annotation24 . _:686613 a rdf:Statement ; up:source unirule:MF_01976 ; rdf:subject ?pfs29 ; rdf:predicate up:annotation ; rdf:object ?annotation30 . _:686614 a rdf:Statement ; up:attribution _:686573 ; rdf:subject ?pfs29 ; rdf:predicate up:annotation ; rdf:object ?annotation30 . _:686615 a rdf:Statement ; up:source unirule:MF_01976 ; rdf:subject ?pfs37 ; rdf:predicate up:annotation ; rdf:object ?annotation38 . _:686616 a rdf:Statement ; up:attribution _:686574 ; rdf:subject ?pfs37 ; rdf:predicate up:annotation ; rdf:object ?annotation38 . _:686617 a rdf:Statement ; up:source unirule:MF_01976 ; rdf:subject ?pfs45 ; rdf:predicate up:annotation ; rdf:object ?annotation46 . _:686618 a rdf:Statement ; up:attribution _:686575 ; rdf:subject ?pfs45 ; rdf:predicate up:annotation ; rdf:object ?annotation46 . _:686619 a rdf:Statement ; up:source unirule:MF_01976 ; rdf:subject ?pfs53 ; rdf:predicate up:annotation ; rdf:object ?annotation54 . _:686620 a rdf:Statement ; up:attribution _:686576 ; rdf:subject ?pfs53 ; rdf:predicate up:annotation ; rdf:object ?annotation54 . _:686621 a rdf:Statement ; up:source unirule:MF_01976 ; rdf:subject ?pfs59 ; rdf:predicate up:annotation ; rdf:object ?annotation60 . _:686622 a rdf:Statement ; up:attribution _:686577 ; rdf:subject ?pfs59 ; rdf:predicate up:annotation ; rdf:object ?annotation60 . _:686623 a rdf:Statement ; up:source unirule:MF_01976 ; rdf:subject ?pfs66 ; rdf:predicate up:annotation ; rdf:object ?annotation67 . _:686624 a rdf:Statement ; up:attribution _:686578 ; rdf:subject ?pfs66 ; rdf:predicate up:annotation ; rdf:object ?annotation67 . _:686625 a rdf:Statement ; up:source unirule:MF_01976 ; rdf:subject ?pfs74 ; rdf:predicate up:annotation ; rdf:object ?annotation75 . _:686626 a rdf:Statement ; up:attribution _:686579 ; rdf:subject ?pfs74 ; rdf:predicate up:annotation ; rdf:object ?annotation75 . _:686627 a rdf:Statement ; up:source unirule:MF_01976 ; rdf:subject ?pfs82 ; rdf:predicate up:annotation ; rdf:object ?annotation83 . _:686628 a rdf:Statement ; up:attribution _:686580 ; rdf:subject ?pfs82 ; rdf:predicate up:annotation ; rdf:object ?annotation83 . _:686629 a rdf:Statement ; up:source unirule:MF_01976 ; rdf:subject ?pfs90 ; rdf:predicate up:annotation ; rdf:object ?annotation91 . _:686630 a rdf:Statement ; up:attribution _:686581 ; rdf:subject ?pfs90 ; rdf:predicate up:annotation ; rdf:object ?annotation91 . _:686631 a rdf:Statement ; up:source unirule:MF_01976 ; rdf:subject ?pfs97 ; rdf:predicate up:annotation ; rdf:object ?annotation98 . _:686632 a rdf:Statement ; up:attribution _:686582 ; rdf:subject ?pfs97 ; rdf:predicate up:annotation ; rdf:object ?annotation98 . _:686633 a rdf:Statement ; up:source unirule:MF_01976 ; rdf:subject ?pfs104 ; rdf:predicate up:annotation ; rdf:object ?annotation105 . _:686634 a rdf:Statement ; up:attribution _:686583 ; rdf:subject ?pfs104 ; rdf:predicate up:annotation ; rdf:object ?annotation105 . _:686635 a rdf:Statement ; up:source unirule:MF_01976 ; rdf:subject ?pfs111 ; rdf:predicate up:annotation ; rdf:object ?annotation112 . _:686636 a rdf:Statement ; up:attribution _:686584 ; rdf:subject ?pfs111 ; rdf:predicate up:annotation ; rdf:object ?annotation112 . _:686637 a rdf:Statement ; up:source unirule:MF_01976 ; rdf:subject ?pfs118 ; rdf:predicate up:annotation ; rdf:object ?annotation119 . _:686638 a rdf:Statement ; up:attribution _:686585 ; rdf:subject ?pfs118 ; rdf:predicate up:annotation ; rdf:object ?annotation119 . } WHERE { #baseURI: http://purl.uniprot.org/unirule/MF_01976 #Rule MF_01976 Created by:ipedruzz on:2014-05-16 Modified by:ecastro on:2023-06-01 VALUES ?supertaxon124 {taxon:2157 taxon:2} ?this up:organism ?thisOrganism ; rdfs:seeAlso signature:MF_01976 . ?thisOrganism rdfs:subClassOf+ ?supertaxon124 . BIND(URI(CONCAT(STR(?this), '#MF_01976a0')) AS ?annotation0) . BIND(URI(CONCAT(STR(?this), '#MF_01976a1')) AS ?annotation1) . BIND(URI(CONCAT(STR(?this), '#MF_01976a2')) AS ?annotation2) . BIND(URI(CONCAT(STR(?this), '#MF_01976a3')) AS ?annotation3) . BIND(URI(CONCAT(STR(?this), '#MF_01976a5')) AS ?annotation5) . OPTIONAL { ?this up:sequence ?thisSequence . ?thisSequence rdf:value ?thisSequenceValue . ?templateMotifMatch129 faldo:location ?templateMotifSequenceMatchRegionQ59126130 ; edam:is_output_of ?templateMotifSequenceProfileAlignmentOperationQ59126132 ; rdf:type edam:data_0869 ; rdf:value ?templateMotifCigarQ59126MF_01976125 . ?templateMotifSequenceMatchRegionQ59126130 faldo:begin ?templateMotifSequenceMatchBeginQ59126131 . ?templateMotifSequenceMatchBeginQ59126131 faldo:position ?templateMotifSequenceMatchBeginPositionQ59126126 ; faldo:reference isoform:Q59126-1 . ?templateMotifSequenceProfileAlignmentOperationQ59126132 edam:has_input signature:MF_01976 ; rdf:type edam:operation_0300 . ?targetMotifMatch133 faldo:location ?targetMotifMatchRegionMatch134 ; edam:is_output_of ?targetMotifSequenceAlignmentOperationMF_01976136 ; rdf:type edam:data_0869 ; rdf:value ?targetMotifMatchCigarQ59126MF_01976127 . ?targetMotifMatchRegionMatch134 faldo:begin ?targetMotifMatchRegionMatchBeginMF_01976135 . ?targetMotifMatchRegionMatchBeginMF_01976135 faldo:position ?targetMotifMatchRegionMatchBeginPositionMF_01976128 ; faldo:reference ?thisSequence . ?targetMotifSequenceAlignmentOperationMF_01976136 edam:has_input signature:MF_01976 ; rdf:type edam:operation_0300 . BIND(?this AS ?tagATP) . BIND(STRLEN(REPLACE(SUBSTR(?templateMotifCigarQ59126MF_01976125, 1, (STRLEN(?templateMotifCigarQ59126MF_01976125) - STRLEN(REPLACE(?templateMotifCigarQ59126MF_01976125, CONCAT('^(?:-*[^-]){', STR(((104 - ?templateMotifSequenceMatchBeginPositionQ59126126) + 1)), '}'), '')))), '[a-z]', '')) AS ?step1137) . BIND((STRLEN(SUBSTR(?targetMotifMatchCigarQ59126MF_01976127, 1, (STRLEN(?targetMotifMatchCigarQ59126MF_01976127) - STRLEN(REPLACE(?targetMotifMatchCigarQ59126MF_01976127, CONCAT('^(?:[a-z]*(?:[A-Z]|-)){', STR(?step1137), '}'), ''))))) - STRLEN(REPLACE(SUBSTR(?targetMotifMatchCigarQ59126MF_01976127, 1, (STRLEN(?targetMotifMatchCigarQ59126MF_01976127) - STRLEN(REPLACE(?targetMotifMatchCigarQ59126MF_01976127, CONCAT('^(?:[a-z]*(?:[A-Z]|-)){', STR(?step1137), '}'), '')))), '[^-]', ''))) AS ?step2138) . BIND(((?step2138 + ?targetMotifMatchRegionMatchBeginPositionMF_01976128) - 1) AS ?thisPositionOn21) . BIND(?thisPositionOn21 AS ?thisPositionOn22) . BIND(?this AS ?pfs1t139) . BIND(URI(CONCAT(STR(?thisSequence), '#position', STR(?thisPositionOn21))) AS ?pfsb19) . BIND(URI(CONCAT(STR(?thisSequence), '#position', STR(?thisPositionOn22))) AS ?pfse20) . FILTER ((SUBSTR(?thisSequenceValue, ?thisPositionOn21, 1) = 'G')) . BIND(URI(CONCAT(STR(?this), '#MF_01976a18')) AS ?annotation18) . BIND(?this AS ?pfs17) . } OPTIONAL { ?this up:sequence ?thisSequence . ?thisSequence rdf:value ?thisSequenceValue . ?templateMotifMatch144 faldo:location ?templateMotifSequenceMatchRegionQ59126145 ; edam:is_output_of ?templateMotifSequenceProfileAlignmentOperationQ59126147 ; rdf:type edam:data_0869 ; rdf:value ?templateMotifCigarQ59126MF_01976140 . ?templateMotifSequenceMatchRegionQ59126145 faldo:begin ?templateMotifSequenceMatchBeginQ59126146 . ?templateMotifSequenceMatchBeginQ59126146 faldo:position ?templateMotifSequenceMatchBeginPositionQ59126141 ; faldo:reference isoform:Q59126-1 . ?templateMotifSequenceProfileAlignmentOperationQ59126147 edam:has_input signature:MF_01976 ; rdf:type edam:operation_0300 . ?targetMotifMatch148 faldo:location ?targetMotifMatchRegionMatch149 ; edam:is_output_of ?targetMotifSequenceAlignmentOperationMF_01976151 ; rdf:type edam:data_0869 ; rdf:value ?targetMotifMatchCigarQ59126MF_01976142 . ?targetMotifMatchRegionMatch149 faldo:begin ?targetMotifMatchRegionMatchBeginMF_01976150 . ?targetMotifMatchRegionMatchBeginMF_01976150 faldo:position ?targetMotifMatchRegionMatchBeginPositionMF_01976143 ; faldo:reference ?thisSequence . ?targetMotifSequenceAlignmentOperationMF_01976151 edam:has_input signature:MF_01976 ; rdf:type edam:operation_0300 . BIND(?this AS ?tagPPI) . BIND(STRLEN(REPLACE(SUBSTR(?templateMotifCigarQ59126MF_01976140, 1, (STRLEN(?templateMotifCigarQ59126MF_01976140) - STRLEN(REPLACE(?templateMotifCigarQ59126MF_01976140, CONCAT('^(?:-*[^-]){', STR(((104 - ?templateMotifSequenceMatchBeginPositionQ59126141) + 1)), '}'), '')))), '[a-z]', '')) AS ?step1152) . BIND((STRLEN(SUBSTR(?targetMotifMatchCigarQ59126MF_01976142, 1, (STRLEN(?targetMotifMatchCigarQ59126MF_01976142) - STRLEN(REPLACE(?targetMotifMatchCigarQ59126MF_01976142, CONCAT('^(?:[a-z]*(?:[A-Z]|-)){', STR(?step1152), '}'), ''))))) - STRLEN(REPLACE(SUBSTR(?targetMotifMatchCigarQ59126MF_01976142, 1, (STRLEN(?targetMotifMatchCigarQ59126MF_01976142) - STRLEN(REPLACE(?targetMotifMatchCigarQ59126MF_01976142, CONCAT('^(?:[a-z]*(?:[A-Z]|-)){', STR(?step1152), '}'), '')))), '[^-]', ''))) AS ?step2153) . BIND(((?step2153 + ?targetMotifMatchRegionMatchBeginPositionMF_01976143) - 1) AS ?thisPositionOn27) . BIND(?thisPositionOn27 AS ?thisPositionOn28) . BIND(?this AS ?pfs2t154) . BIND(URI(CONCAT(STR(?thisSequence), '#position', STR(?thisPositionOn27))) AS ?pfsb25) . BIND(URI(CONCAT(STR(?thisSequence), '#position', STR(?thisPositionOn28))) AS ?pfse26) . FILTER ((SUBSTR(?thisSequenceValue, ?thisPositionOn27, 1) = 'D')) . BIND(URI(CONCAT(STR(?this), '#MF_01976a24')) AS ?annotation24) . BIND(?this AS ?pfs23) . } OPTIONAL { ?this up:sequence ?thisSequence . ?thisSequence rdf:value ?thisSequenceValue . ?templateMotifMatch159 faldo:location ?templateMotifSequenceMatchRegionQ59126160 ; edam:is_output_of ?templateMotifSequenceProfileAlignmentOperationQ59126162 ; rdf:type edam:data_0869 ; rdf:value ?templateMotifCigarQ59126MF_01976155 . ?templateMotifSequenceMatchRegionQ59126160 faldo:begin ?templateMotifSequenceMatchBeginQ59126161 . ?templateMotifSequenceMatchBeginQ59126161 faldo:position ?templateMotifSequenceMatchBeginPositionQ59126156 ; faldo:reference isoform:Q59126-1 . ?templateMotifSequenceProfileAlignmentOperationQ59126162 edam:has_input signature:MF_01976 ; rdf:type edam:operation_0300 . ?targetMotifMatch163 faldo:location ?targetMotifMatchRegionMatch164 ; edam:is_output_of ?targetMotifSequenceAlignmentOperationMF_01976166 ; rdf:type edam:data_0869 ; rdf:value ?targetMotifMatchCigarQ59126MF_01976157 . ?targetMotifMatchRegionMatch164 faldo:begin ?targetMotifMatchRegionMatchBeginMF_01976165 . ?targetMotifMatchRegionMatchBeginMF_01976165 faldo:position ?targetMotifMatchRegionMatchBeginPositionMF_01976158 ; faldo:reference ?thisSequence . ?targetMotifSequenceAlignmentOperationMF_01976166 edam:has_input signature:MF_01976 ; rdf:type edam:operation_0300 . BIND(STRLEN(REPLACE(SUBSTR(?templateMotifCigarQ59126MF_01976155, 1, (STRLEN(?templateMotifCigarQ59126MF_01976155) - STRLEN(REPLACE(?templateMotifCigarQ59126MF_01976155, CONCAT('^(?:-*[^-]){', STR(((125 - ?templateMotifSequenceMatchBeginPositionQ59126156) + 1)), '}'), '')))), '[a-z]', '')) AS ?step1167) . BIND((STRLEN(SUBSTR(?targetMotifMatchCigarQ59126MF_01976157, 1, (STRLEN(?targetMotifMatchCigarQ59126MF_01976157) - STRLEN(REPLACE(?targetMotifMatchCigarQ59126MF_01976157, CONCAT('^(?:[a-z]*(?:[A-Z]|-)){', STR(?step1167), '}'), ''))))) - STRLEN(REPLACE(SUBSTR(?targetMotifMatchCigarQ59126MF_01976157, 1, (STRLEN(?targetMotifMatchCigarQ59126MF_01976157) - STRLEN(REPLACE(?targetMotifMatchCigarQ59126MF_01976157, CONCAT('^(?:[a-z]*(?:[A-Z]|-)){', STR(?step1167), '}'), '')))), '[^-]', ''))) AS ?step2168) . BIND(((?step2168 + ?targetMotifMatchRegionMatchBeginPositionMF_01976158) - 1) AS ?thisPositionOn35) . BIND(STRLEN(REPLACE(SUBSTR(?templateMotifCigarQ59126MF_01976155, 1, (STRLEN(?templateMotifCigarQ59126MF_01976155) - STRLEN(REPLACE(?templateMotifCigarQ59126MF_01976155, CONCAT('^(?:-*[^-]){', STR(((127 - ?templateMotifSequenceMatchBeginPositionQ59126156) + 1)), '}'), '')))), '[a-z]', '')) AS ?step1169) . BIND((STRLEN(SUBSTR(?targetMotifMatchCigarQ59126MF_01976157, 1, (STRLEN(?targetMotifMatchCigarQ59126MF_01976157) - STRLEN(REPLACE(?targetMotifMatchCigarQ59126MF_01976157, CONCAT('^(?:[a-z]*(?:[A-Z]|-)){', STR(?step1169), '}'), ''))))) - STRLEN(REPLACE(SUBSTR(?targetMotifMatchCigarQ59126MF_01976157, 1, (STRLEN(?targetMotifMatchCigarQ59126MF_01976157) - STRLEN(REPLACE(?targetMotifMatchCigarQ59126MF_01976157, CONCAT('^(?:[a-z]*(?:[A-Z]|-)){', STR(?step1169), '}'), '')))), '[^-]', ''))) AS ?step2170) . BIND(((?step2170 + ?targetMotifMatchRegionMatchBeginPositionMF_01976158) - 1) AS ?thisPositionOn36) . BIND(?this AS ?pfs3t171) . BIND(URI(CONCAT(STR(?thisSequence), '#position', STR(?thisPositionOn35))) AS ?pfsb31) . BIND(URI(CONCAT(STR(?thisSequence), '#position', STR(?thisPositionOn36))) AS ?pfse32) . FILTER (REGEX('T[ARNDCQEGHILKMFPSTWYVBZJUOX]D', SUBSTR(?thisSequenceValue, ?thisPositionOn35, (?thisPositionOn36 - ?thisPositionOn35)))) . BIND(URI(CONCAT(STR(?this), '#MF_01976a30')) AS ?annotation30) . BIND(?this AS ?pfs29) . } OPTIONAL { ?this up:sequence ?thisSequence . ?thisSequence rdf:value ?thisSequenceValue . ?templateMotifMatch176 faldo:location ?templateMotifSequenceMatchRegionQ59126177 ; edam:is_output_of ?templateMotifSequenceProfileAlignmentOperationQ59126179 ; rdf:type edam:data_0869 ; rdf:value ?templateMotifCigarQ59126MF_01976172 . ?templateMotifSequenceMatchRegionQ59126177 faldo:begin ?templateMotifSequenceMatchBeginQ59126178 . ?templateMotifSequenceMatchBeginQ59126178 faldo:position ?templateMotifSequenceMatchBeginPositionQ59126173 ; faldo:reference isoform:Q59126-1 . ?templateMotifSequenceProfileAlignmentOperationQ59126179 edam:has_input signature:MF_01976 ; rdf:type edam:operation_0300 . ?targetMotifMatch180 faldo:location ?targetMotifMatchRegionMatch181 ; edam:is_output_of ?targetMotifSequenceAlignmentOperationMF_01976183 ; rdf:type edam:data_0869 ; rdf:value ?targetMotifMatchCigarQ59126MF_01976174 . ?targetMotifMatchRegionMatch181 faldo:begin ?targetMotifMatchRegionMatchBeginMF_01976182 . ?targetMotifMatchRegionMatchBeginMF_01976182 faldo:position ?targetMotifMatchRegionMatchBeginPositionMF_01976175 ; faldo:reference ?thisSequence . ?targetMotifSequenceAlignmentOperationMF_01976183 edam:has_input signature:MF_01976 ; rdf:type edam:operation_0300 . BIND(STRLEN(REPLACE(SUBSTR(?templateMotifCigarQ59126MF_01976172, 1, (STRLEN(?templateMotifCigarQ59126MF_01976172) - STRLEN(REPLACE(?templateMotifCigarQ59126MF_01976172, CONCAT('^(?:-*[^-]){', STR(((169 - ?templateMotifSequenceMatchBeginPositionQ59126173) + 1)), '}'), '')))), '[a-z]', '')) AS ?step1184) . BIND((STRLEN(SUBSTR(?targetMotifMatchCigarQ59126MF_01976174, 1, (STRLEN(?targetMotifMatchCigarQ59126MF_01976174) - STRLEN(REPLACE(?targetMotifMatchCigarQ59126MF_01976174, CONCAT('^(?:[a-z]*(?:[A-Z]|-)){', STR(?step1184), '}'), ''))))) - STRLEN(REPLACE(SUBSTR(?targetMotifMatchCigarQ59126MF_01976174, 1, (STRLEN(?targetMotifMatchCigarQ59126MF_01976174) - STRLEN(REPLACE(?targetMotifMatchCigarQ59126MF_01976174, CONCAT('^(?:[a-z]*(?:[A-Z]|-)){', STR(?step1184), '}'), '')))), '[^-]', ''))) AS ?step2185) . BIND(((?step2185 + ?targetMotifMatchRegionMatchBeginPositionMF_01976175) - 1) AS ?thisPositionOn43) . BIND(STRLEN(REPLACE(SUBSTR(?templateMotifCigarQ59126MF_01976172, 1, (STRLEN(?templateMotifCigarQ59126MF_01976172) - STRLEN(REPLACE(?templateMotifCigarQ59126MF_01976172, CONCAT('^(?:-*[^-]){', STR(((171 - ?templateMotifSequenceMatchBeginPositionQ59126173) + 1)), '}'), '')))), '[a-z]', '')) AS ?step1186) . BIND((STRLEN(SUBSTR(?targetMotifMatchCigarQ59126MF_01976174, 1, (STRLEN(?targetMotifMatchCigarQ59126MF_01976174) - STRLEN(REPLACE(?targetMotifMatchCigarQ59126MF_01976174, CONCAT('^(?:[a-z]*(?:[A-Z]|-)){', STR(?step1186), '}'), ''))))) - STRLEN(REPLACE(SUBSTR(?targetMotifMatchCigarQ59126MF_01976174, 1, (STRLEN(?targetMotifMatchCigarQ59126MF_01976174) - STRLEN(REPLACE(?targetMotifMatchCigarQ59126MF_01976174, CONCAT('^(?:[a-z]*(?:[A-Z]|-)){', STR(?step1186), '}'), '')))), '[^-]', ''))) AS ?step2187) . BIND(((?step2187 + ?targetMotifMatchRegionMatchBeginPositionMF_01976175) - 1) AS ?thisPositionOn44) . BIND(?this AS ?pfs3t188) . BIND(URI(CONCAT(STR(?thisSequence), '#position', STR(?thisPositionOn43))) AS ?pfsb39) . BIND(URI(CONCAT(STR(?thisSequence), '#position', STR(?thisPositionOn44))) AS ?pfse40) . FILTER (REGEX('MG[RH]', SUBSTR(?thisSequenceValue, ?thisPositionOn43, (?thisPositionOn44 - ?thisPositionOn43)))) . BIND(URI(CONCAT(STR(?this), '#MF_01976a38')) AS ?annotation38) . BIND(?this AS ?pfs37) . } OPTIONAL { ?this up:sequence ?thisSequence . ?thisSequence rdf:value ?thisSequenceValue . ?templateMotifMatch193 faldo:location ?templateMotifSequenceMatchRegionQ59126194 ; edam:is_output_of ?templateMotifSequenceProfileAlignmentOperationQ59126196 ; rdf:type edam:data_0869 ; rdf:value ?templateMotifCigarQ59126MF_01976189 . ?templateMotifSequenceMatchRegionQ59126194 faldo:begin ?templateMotifSequenceMatchBeginQ59126195 . ?templateMotifSequenceMatchBeginQ59126195 faldo:position ?templateMotifSequenceMatchBeginPositionQ59126190 ; faldo:reference isoform:Q59126-1 . ?templateMotifSequenceProfileAlignmentOperationQ59126196 edam:has_input signature:MF_01976 ; rdf:type edam:operation_0300 . ?targetMotifMatch197 faldo:location ?targetMotifMatchRegionMatch198 ; edam:is_output_of ?targetMotifSequenceAlignmentOperationMF_01976200 ; rdf:type edam:data_0869 ; rdf:value ?targetMotifMatchCigarQ59126MF_01976191 . ?targetMotifMatchRegionMatch198 faldo:begin ?targetMotifMatchRegionMatchBeginMF_01976199 . ?targetMotifMatchRegionMatchBeginMF_01976199 faldo:position ?targetMotifMatchRegionMatchBeginPositionMF_01976192 ; faldo:reference ?thisSequence . ?targetMotifSequenceAlignmentOperationMF_01976200 edam:has_input signature:MF_01976 ; rdf:type edam:operation_0300 . BIND(STRLEN(REPLACE(SUBSTR(?templateMotifCigarQ59126MF_01976189, 1, (STRLEN(?templateMotifCigarQ59126MF_01976189) - STRLEN(REPLACE(?templateMotifCigarQ59126MF_01976189, CONCAT('^(?:-*[^-]){', STR(((271 - ?templateMotifSequenceMatchBeginPositionQ59126190) + 1)), '}'), '')))), '[a-z]', '')) AS ?step1201) . BIND((STRLEN(SUBSTR(?targetMotifMatchCigarQ59126MF_01976191, 1, (STRLEN(?targetMotifMatchCigarQ59126MF_01976191) - STRLEN(REPLACE(?targetMotifMatchCigarQ59126MF_01976191, CONCAT('^(?:[a-z]*(?:[A-Z]|-)){', STR(?step1201), '}'), ''))))) - STRLEN(REPLACE(SUBSTR(?targetMotifMatchCigarQ59126MF_01976191, 1, (STRLEN(?targetMotifMatchCigarQ59126MF_01976191) - STRLEN(REPLACE(?targetMotifMatchCigarQ59126MF_01976191, CONCAT('^(?:[a-z]*(?:[A-Z]|-)){', STR(?step1201), '}'), '')))), '[^-]', ''))) AS ?step2202) . BIND(((?step2202 + ?targetMotifMatchRegionMatchBeginPositionMF_01976192) - 1) AS ?thisPositionOn51) . BIND(STRLEN(REPLACE(SUBSTR(?templateMotifCigarQ59126MF_01976189, 1, (STRLEN(?templateMotifCigarQ59126MF_01976189) - STRLEN(REPLACE(?templateMotifCigarQ59126MF_01976189, CONCAT('^(?:-*[^-]){', STR(((274 - ?templateMotifSequenceMatchBeginPositionQ59126190) + 1)), '}'), '')))), '[a-z]', '')) AS ?step1203) . BIND((STRLEN(SUBSTR(?targetMotifMatchCigarQ59126MF_01976191, 1, (STRLEN(?targetMotifMatchCigarQ59126MF_01976191) - STRLEN(REPLACE(?targetMotifMatchCigarQ59126MF_01976191, CONCAT('^(?:[a-z]*(?:[A-Z]|-)){', STR(?step1203), '}'), ''))))) - STRLEN(REPLACE(SUBSTR(?targetMotifMatchCigarQ59126MF_01976191, 1, (STRLEN(?targetMotifMatchCigarQ59126MF_01976191) - STRLEN(REPLACE(?targetMotifMatchCigarQ59126MF_01976191, CONCAT('^(?:[a-z]*(?:[A-Z]|-)){', STR(?step1203), '}'), '')))), '[^-]', ''))) AS ?step2204) . BIND(((?step2204 + ?targetMotifMatchRegionMatchBeginPositionMF_01976192) - 1) AS ?thisPositionOn52) . BIND(?this AS ?pfs3t205) . BIND(URI(CONCAT(STR(?thisSequence), '#position', STR(?thisPositionOn51))) AS ?pfsb47) . BIND(URI(CONCAT(STR(?thisSequence), '#position', STR(?thisPositionOn52))) AS ?pfse48) . FILTER (REGEX('[HY][ARNDCQEGHILKMFPSTWYVBZJUOX]{2)R', SUBSTR(?thisSequenceValue, ?thisPositionOn51, (?thisPositionOn52 - ?thisPositionOn51)))) . BIND(URI(CONCAT(STR(?this), '#MF_01976a46')) AS ?annotation46) . BIND(?this AS ?pfs45) . } OPTIONAL { ?this up:sequence ?thisSequence . ?thisSequence rdf:value ?thisSequenceValue . ?templateMotifMatch210 faldo:location ?templateMotifSequenceMatchRegionQ59126211 ; edam:is_output_of ?templateMotifSequenceProfileAlignmentOperationQ59126213 ; rdf:type edam:data_0869 ; rdf:value ?templateMotifCigarQ59126MF_01976206 . ?templateMotifSequenceMatchRegionQ59126211 faldo:begin ?templateMotifSequenceMatchBeginQ59126212 . ?templateMotifSequenceMatchBeginQ59126212 faldo:position ?templateMotifSequenceMatchBeginPositionQ59126207 ; faldo:reference isoform:Q59126-1 . ?templateMotifSequenceProfileAlignmentOperationQ59126213 edam:has_input signature:MF_01976 ; rdf:type edam:operation_0300 . ?targetMotifMatch214 faldo:location ?targetMotifMatchRegionMatch215 ; edam:is_output_of ?targetMotifSequenceAlignmentOperationMF_01976217 ; rdf:type edam:data_0869 ; rdf:value ?targetMotifMatchCigarQ59126MF_01976208 . ?targetMotifMatchRegionMatch215 faldo:begin ?targetMotifMatchRegionMatchBeginMF_01976216 . ?targetMotifMatchRegionMatchBeginMF_01976216 faldo:position ?targetMotifMatchRegionMatchBeginPositionMF_01976209 ; faldo:reference ?thisSequence . ?targetMotifSequenceAlignmentOperationMF_01976217 edam:has_input signature:MF_01976 ; rdf:type edam:operation_0300 . BIND(STRLEN(REPLACE(SUBSTR(?templateMotifCigarQ59126MF_01976206, 1, (STRLEN(?templateMotifCigarQ59126MF_01976206) - STRLEN(REPLACE(?templateMotifCigarQ59126MF_01976206, CONCAT('^(?:-*[^-]){', STR(((127 - ?templateMotifSequenceMatchBeginPositionQ59126207) + 1)), '}'), '')))), '[a-z]', '')) AS ?step1218) . BIND((STRLEN(SUBSTR(?targetMotifMatchCigarQ59126MF_01976208, 1, (STRLEN(?targetMotifMatchCigarQ59126MF_01976208) - STRLEN(REPLACE(?targetMotifMatchCigarQ59126MF_01976208, CONCAT('^(?:[a-z]*(?:[A-Z]|-)){', STR(?step1218), '}'), ''))))) - STRLEN(REPLACE(SUBSTR(?targetMotifMatchCigarQ59126MF_01976208, 1, (STRLEN(?targetMotifMatchCigarQ59126MF_01976208) - STRLEN(REPLACE(?targetMotifMatchCigarQ59126MF_01976208, CONCAT('^(?:[a-z]*(?:[A-Z]|-)){', STR(?step1218), '}'), '')))), '[^-]', ''))) AS ?step2219) . BIND(((?step2219 + ?targetMotifMatchRegionMatchBeginPositionMF_01976209) - 1) AS ?thisPositionOn57) . BIND(?thisPositionOn57 AS ?thisPositionOn58) . BIND(?this AS ?pfs3t220) . BIND(URI(CONCAT(STR(?thisSequence), '#position', STR(?thisPositionOn57))) AS ?pfsb55) . BIND(URI(CONCAT(STR(?thisSequence), '#position', STR(?thisPositionOn58))) AS ?pfse56) . FILTER ((SUBSTR(?thisSequenceValue, ?thisPositionOn57, 1) = 'D')) . BIND(URI(CONCAT(STR(?this), '#MF_01976a54')) AS ?annotation54) . BIND(?this AS ?pfs53) . } OPTIONAL { ?this up:sequence ?thisSequence . ?thisSequence rdf:value ?thisSequenceValue . ?templateMotifMatch225 faldo:location ?templateMotifSequenceMatchRegionQ59126226 ; edam:is_output_of ?templateMotifSequenceProfileAlignmentOperationQ59126228 ; rdf:type edam:data_0869 ; rdf:value ?templateMotifCigarQ59126MF_01976221 . ?templateMotifSequenceMatchRegionQ59126226 faldo:begin ?templateMotifSequenceMatchBeginQ59126227 . ?templateMotifSequenceMatchBeginQ59126227 faldo:position ?templateMotifSequenceMatchBeginPositionQ59126222 ; faldo:reference isoform:Q59126-1 . ?templateMotifSequenceProfileAlignmentOperationQ59126228 edam:has_input signature:MF_01976 ; rdf:type edam:operation_0300 . ?targetMotifMatch229 faldo:location ?targetMotifMatchRegionMatch230 ; edam:is_output_of ?targetMotifSequenceAlignmentOperationMF_01976232 ; rdf:type edam:data_0869 ; rdf:value ?targetMotifMatchCigarQ59126MF_01976223 . ?targetMotifMatchRegionMatch230 faldo:begin ?targetMotifMatchRegionMatchBeginMF_01976231 . ?targetMotifMatchRegionMatchBeginMF_01976231 faldo:position ?targetMotifMatchRegionMatchBeginPositionMF_01976224 ; faldo:reference ?thisSequence . ?targetMotifSequenceAlignmentOperationMF_01976232 edam:has_input signature:MF_01976 ; rdf:type edam:operation_0300 . BIND(STRLEN(REPLACE(SUBSTR(?templateMotifCigarQ59126MF_01976221, 1, (STRLEN(?templateMotifCigarQ59126MF_01976221) - STRLEN(REPLACE(?templateMotifCigarQ59126MF_01976221, CONCAT('^(?:-*[^-]){', STR(((103 - ?templateMotifSequenceMatchBeginPositionQ59126222) + 1)), '}'), '')))), '[a-z]', '')) AS ?step1233) . BIND((STRLEN(SUBSTR(?targetMotifMatchCigarQ59126MF_01976223, 1, (STRLEN(?targetMotifMatchCigarQ59126MF_01976223) - STRLEN(REPLACE(?targetMotifMatchCigarQ59126MF_01976223, CONCAT('^(?:[a-z]*(?:[A-Z]|-)){', STR(?step1233), '}'), ''))))) - STRLEN(REPLACE(SUBSTR(?targetMotifMatchCigarQ59126MF_01976223, 1, (STRLEN(?targetMotifMatchCigarQ59126MF_01976223) - STRLEN(REPLACE(?targetMotifMatchCigarQ59126MF_01976223, CONCAT('^(?:[a-z]*(?:[A-Z]|-)){', STR(?step1233), '}'), '')))), '[^-]', ''))) AS ?step2234) . BIND(((?step2234 + ?targetMotifMatchRegionMatchBeginPositionMF_01976224) - 1) AS ?thisPositionOn64) . BIND(?thisPositionOn64 AS ?thisPositionOn65) . BIND(?this AS ?pfs3t235) . BIND(URI(CONCAT(STR(?thisSequence), '#position', STR(?thisPositionOn64))) AS ?pfsb61) . BIND(URI(CONCAT(STR(?thisSequence), '#position', STR(?thisPositionOn65))) AS ?pfse62) . FILTER (REGEX('[DEN]', SUBSTR(?thisSequenceValue, ?thisPositionOn64, 1))) . BIND(URI(CONCAT(STR(?this), '#MF_01976a60')) AS ?annotation60) . BIND(?this AS ?pfs59) . } OPTIONAL { ?this up:sequence ?thisSequence . ?thisSequence rdf:value ?thisSequenceValue . ?templateMotifMatch240 faldo:location ?templateMotifSequenceMatchRegionQ59126241 ; edam:is_output_of ?templateMotifSequenceProfileAlignmentOperationQ59126243 ; rdf:type edam:data_0869 ; rdf:value ?templateMotifCigarQ59126MF_01976236 . ?templateMotifSequenceMatchRegionQ59126241 faldo:begin ?templateMotifSequenceMatchBeginQ59126242 . ?templateMotifSequenceMatchBeginQ59126242 faldo:position ?templateMotifSequenceMatchBeginPositionQ59126237 ; faldo:reference isoform:Q59126-1 . ?templateMotifSequenceProfileAlignmentOperationQ59126243 edam:has_input signature:MF_01976 ; rdf:type edam:operation_0300 . ?targetMotifMatch244 faldo:location ?targetMotifMatchRegionMatch245 ; edam:is_output_of ?targetMotifSequenceAlignmentOperationMF_01976247 ; rdf:type edam:data_0869 ; rdf:value ?targetMotifMatchCigarQ59126MF_01976238 . ?targetMotifMatchRegionMatch245 faldo:begin ?targetMotifMatchRegionMatchBeginMF_01976246 . ?targetMotifMatchRegionMatchBeginMF_01976246 faldo:position ?targetMotifMatchRegionMatchBeginPositionMF_01976239 ; faldo:reference ?thisSequence . ?targetMotifSequenceAlignmentOperationMF_01976247 edam:has_input signature:MF_01976 ; rdf:type edam:operation_0300 . BIND(STRLEN(REPLACE(SUBSTR(?templateMotifCigarQ59126MF_01976236, 1, (STRLEN(?templateMotifCigarQ59126MF_01976236) - STRLEN(REPLACE(?templateMotifCigarQ59126MF_01976236, CONCAT('^(?:-*[^-]){', STR(((162 - ?templateMotifSequenceMatchBeginPositionQ59126237) + 1)), '}'), '')))), '[a-z]', '')) AS ?step1248) . BIND((STRLEN(SUBSTR(?targetMotifMatchCigarQ59126MF_01976238, 1, (STRLEN(?targetMotifMatchCigarQ59126MF_01976238) - STRLEN(REPLACE(?targetMotifMatchCigarQ59126MF_01976238, CONCAT('^(?:[a-z]*(?:[A-Z]|-)){', STR(?step1248), '}'), ''))))) - STRLEN(REPLACE(SUBSTR(?targetMotifMatchCigarQ59126MF_01976238, 1, (STRLEN(?targetMotifMatchCigarQ59126MF_01976238) - STRLEN(REPLACE(?targetMotifMatchCigarQ59126MF_01976238, CONCAT('^(?:[a-z]*(?:[A-Z]|-)){', STR(?step1248), '}'), '')))), '[^-]', ''))) AS ?step2249) . BIND(((?step2249 + ?targetMotifMatchRegionMatchBeginPositionMF_01976239) - 1) AS ?thisPositionOn72) . BIND(?thisPositionOn72 AS ?thisPositionOn73) . BIND(?this AS ?pfs3t250) . BIND(URI(CONCAT(STR(?thisSequence), '#position', STR(?thisPositionOn72))) AS ?pfsb68) . BIND(URI(CONCAT(STR(?thisSequence), '#position', STR(?thisPositionOn73))) AS ?pfse69) . FILTER ((SUBSTR(?thisSequenceValue, ?thisPositionOn72, 1) = 'R')) . BIND(URI(CONCAT(STR(?this), '#MF_01976a67')) AS ?annotation67) . BIND(?this AS ?pfs66) . } OPTIONAL { ?this up:sequence ?thisSequence . ?thisSequence rdf:value ?thisSequenceValue . ?templateMotifMatch255 faldo:location ?templateMotifSequenceMatchRegionQ59126256 ; edam:is_output_of ?templateMotifSequenceProfileAlignmentOperationQ59126258 ; rdf:type edam:data_0869 ; rdf:value ?templateMotifCigarQ59126MF_01976251 . ?templateMotifSequenceMatchRegionQ59126256 faldo:begin ?templateMotifSequenceMatchBeginQ59126257 . ?templateMotifSequenceMatchBeginQ59126257 faldo:position ?templateMotifSequenceMatchBeginPositionQ59126252 ; faldo:reference isoform:Q59126-1 . ?templateMotifSequenceProfileAlignmentOperationQ59126258 edam:has_input signature:MF_01976 ; rdf:type edam:operation_0300 . ?targetMotifMatch259 faldo:location ?targetMotifMatchRegionMatch260 ; edam:is_output_of ?targetMotifSequenceAlignmentOperationMF_01976262 ; rdf:type edam:data_0869 ; rdf:value ?targetMotifMatchCigarQ59126MF_01976253 . ?targetMotifMatchRegionMatch260 faldo:begin ?targetMotifMatchRegionMatchBeginMF_01976261 . ?targetMotifMatchRegionMatchBeginMF_01976261 faldo:position ?targetMotifMatchRegionMatchBeginPositionMF_01976254 ; faldo:reference ?thisSequence . ?targetMotifSequenceAlignmentOperationMF_01976262 edam:has_input signature:MF_01976 ; rdf:type edam:operation_0300 . BIND(STRLEN(REPLACE(SUBSTR(?templateMotifCigarQ59126MF_01976251, 1, (STRLEN(?templateMotifCigarQ59126MF_01976251) - STRLEN(REPLACE(?templateMotifCigarQ59126MF_01976251, CONCAT('^(?:-*[^-]){', STR(((221 - ?templateMotifSequenceMatchBeginPositionQ59126252) + 1)), '}'), '')))), '[a-z]', '')) AS ?step1263) . BIND((STRLEN(SUBSTR(?targetMotifMatchCigarQ59126MF_01976253, 1, (STRLEN(?targetMotifMatchCigarQ59126MF_01976253) - STRLEN(REPLACE(?targetMotifMatchCigarQ59126MF_01976253, CONCAT('^(?:[a-z]*(?:[A-Z]|-)){', STR(?step1263), '}'), ''))))) - STRLEN(REPLACE(SUBSTR(?targetMotifMatchCigarQ59126MF_01976253, 1, (STRLEN(?targetMotifMatchCigarQ59126MF_01976253) - STRLEN(REPLACE(?targetMotifMatchCigarQ59126MF_01976253, CONCAT('^(?:[a-z]*(?:[A-Z]|-)){', STR(?step1263), '}'), '')))), '[^-]', ''))) AS ?step2264) . BIND(((?step2264 + ?targetMotifMatchRegionMatchBeginPositionMF_01976254) - 1) AS ?thisPositionOn80) . BIND(?thisPositionOn80 AS ?thisPositionOn81) . BIND(?this AS ?pfs3t265) . BIND(URI(CONCAT(STR(?thisSequence), '#position', STR(?thisPositionOn80))) AS ?pfsb76) . BIND(URI(CONCAT(STR(?thisSequence), '#position', STR(?thisPositionOn81))) AS ?pfse77) . FILTER ((SUBSTR(?thisSequenceValue, ?thisPositionOn80, 1) = 'E')) . BIND(URI(CONCAT(STR(?this), '#MF_01976a75')) AS ?annotation75) . BIND(?this AS ?pfs74) . } OPTIONAL { ?this up:sequence ?thisSequence . ?thisSequence rdf:value ?thisSequenceValue . ?templateMotifMatch270 faldo:location ?templateMotifSequenceMatchRegionQ59126271 ; edam:is_output_of ?templateMotifSequenceProfileAlignmentOperationQ59126273 ; rdf:type edam:data_0869 ; rdf:value ?templateMotifCigarQ59126MF_01976266 . ?templateMotifSequenceMatchRegionQ59126271 faldo:begin ?templateMotifSequenceMatchBeginQ59126272 . ?templateMotifSequenceMatchBeginQ59126272 faldo:position ?templateMotifSequenceMatchBeginPositionQ59126267 ; faldo:reference isoform:Q59126-1 . ?templateMotifSequenceProfileAlignmentOperationQ59126273 edam:has_input signature:MF_01976 ; rdf:type edam:operation_0300 . ?targetMotifMatch274 faldo:location ?targetMotifMatchRegionMatch275 ; edam:is_output_of ?targetMotifSequenceAlignmentOperationMF_01976277 ; rdf:type edam:data_0869 ; rdf:value ?targetMotifMatchCigarQ59126MF_01976268 . ?targetMotifMatchRegionMatch275 faldo:begin ?targetMotifMatchRegionMatchBeginMF_01976276 . ?targetMotifMatchRegionMatchBeginMF_01976276 faldo:position ?targetMotifMatchRegionMatchBeginPositionMF_01976269 ; faldo:reference ?thisSequence . ?targetMotifSequenceAlignmentOperationMF_01976277 edam:has_input signature:MF_01976 ; rdf:type edam:operation_0300 . BIND(STRLEN(REPLACE(SUBSTR(?templateMotifCigarQ59126MF_01976266, 1, (STRLEN(?templateMotifCigarQ59126MF_01976266) - STRLEN(REPLACE(?templateMotifCigarQ59126MF_01976266, CONCAT('^(?:-*[^-]){', STR(((265 - ?templateMotifSequenceMatchBeginPositionQ59126267) + 1)), '}'), '')))), '[a-z]', '')) AS ?step1278) . BIND((STRLEN(SUBSTR(?targetMotifMatchCigarQ59126MF_01976268, 1, (STRLEN(?targetMotifMatchCigarQ59126MF_01976268) - STRLEN(REPLACE(?targetMotifMatchCigarQ59126MF_01976268, CONCAT('^(?:[a-z]*(?:[A-Z]|-)){', STR(?step1278), '}'), ''))))) - STRLEN(REPLACE(SUBSTR(?targetMotifMatchCigarQ59126MF_01976268, 1, (STRLEN(?targetMotifMatchCigarQ59126MF_01976268) - STRLEN(REPLACE(?targetMotifMatchCigarQ59126MF_01976268, CONCAT('^(?:[a-z]*(?:[A-Z]|-)){', STR(?step1278), '}'), '')))), '[^-]', ''))) AS ?step2279) . BIND(((?step2279 + ?targetMotifMatchRegionMatchBeginPositionMF_01976269) - 1) AS ?thisPositionOn88) . BIND(?thisPositionOn88 AS ?thisPositionOn89) . BIND(?this AS ?pfs3t280) . BIND(URI(CONCAT(STR(?thisSequence), '#position', STR(?thisPositionOn88))) AS ?pfsb84) . BIND(URI(CONCAT(STR(?thisSequence), '#position', STR(?thisPositionOn89))) AS ?pfse85) . FILTER (REGEX('[RK]', SUBSTR(?thisSequenceValue, ?thisPositionOn88, 1))) . BIND(URI(CONCAT(STR(?this), '#MF_01976a83')) AS ?annotation83) . BIND(?this AS ?pfs82) . } OPTIONAL { ?this up:sequence ?thisSequence . ?thisSequence rdf:value ?thisSequenceValue . ?templateMotifMatch285 faldo:location ?templateMotifSequenceMatchRegionQ9L1L8286 ; edam:is_output_of ?templateMotifSequenceProfileAlignmentOperationQ9L1L8288 ; rdf:type edam:data_0869 ; rdf:value ?templateMotifCigarQ9L1L8MF_01976281 . ?templateMotifSequenceMatchRegionQ9L1L8286 faldo:begin ?templateMotifSequenceMatchBeginQ9L1L8287 . ?templateMotifSequenceMatchBeginQ9L1L8287 faldo:position ?templateMotifSequenceMatchBeginPositionQ9L1L8282 ; faldo:reference isoform:Q9L1L8-1 . ?templateMotifSequenceProfileAlignmentOperationQ9L1L8288 edam:has_input signature:MF_01976 ; rdf:type edam:operation_0300 . ?targetMotifMatch289 faldo:location ?targetMotifMatchRegionMatch290 ; edam:is_output_of ?targetMotifSequenceAlignmentOperationMF_01976292 ; rdf:type edam:data_0869 ; rdf:value ?targetMotifMatchCigarQ9L1L8MF_01976283 . ?targetMotifMatchRegionMatch290 faldo:begin ?targetMotifMatchRegionMatchBeginMF_01976291 . ?targetMotifMatchRegionMatchBeginMF_01976291 faldo:position ?targetMotifMatchRegionMatchBeginPositionMF_01976284 ; faldo:reference ?thisSequence . ?targetMotifSequenceAlignmentOperationMF_01976292 edam:has_input signature:MF_01976 ; rdf:type edam:operation_0300 . BIND(STRLEN(REPLACE(SUBSTR(?templateMotifCigarQ9L1L8MF_01976281, 1, (STRLEN(?templateMotifCigarQ9L1L8MF_01976281) - STRLEN(REPLACE(?templateMotifCigarQ9L1L8MF_01976281, CONCAT('^(?:-*[^-]){', STR(((72 - ?templateMotifSequenceMatchBeginPositionQ9L1L8282) + 1)), '}'), '')))), '[a-z]', '')) AS ?step1293) . BIND((STRLEN(SUBSTR(?targetMotifMatchCigarQ9L1L8MF_01976283, 1, (STRLEN(?targetMotifMatchCigarQ9L1L8MF_01976283) - STRLEN(REPLACE(?targetMotifMatchCigarQ9L1L8MF_01976283, CONCAT('^(?:[a-z]*(?:[A-Z]|-)){', STR(?step1293), '}'), ''))))) - STRLEN(REPLACE(SUBSTR(?targetMotifMatchCigarQ9L1L8MF_01976283, 1, (STRLEN(?targetMotifMatchCigarQ9L1L8MF_01976283) - STRLEN(REPLACE(?targetMotifMatchCigarQ9L1L8MF_01976283, CONCAT('^(?:[a-z]*(?:[A-Z]|-)){', STR(?step1293), '}'), '')))), '[^-]', ''))) AS ?step2294) . BIND(((?step2294 + ?targetMotifMatchRegionMatchBeginPositionMF_01976284) - 1) AS ?thisPositionOn95) . BIND(STRLEN(REPLACE(SUBSTR(?templateMotifCigarQ9L1L8MF_01976281, 1, (STRLEN(?templateMotifCigarQ9L1L8MF_01976281) - STRLEN(REPLACE(?templateMotifCigarQ9L1L8MF_01976281, CONCAT('^(?:-*[^-]){', STR(((73 - ?templateMotifSequenceMatchBeginPositionQ9L1L8282) + 1)), '}'), '')))), '[a-z]', '')) AS ?step1295) . BIND((STRLEN(SUBSTR(?targetMotifMatchCigarQ9L1L8MF_01976283, 1, (STRLEN(?targetMotifMatchCigarQ9L1L8MF_01976283) - STRLEN(REPLACE(?targetMotifMatchCigarQ9L1L8MF_01976283, CONCAT('^(?:[a-z]*(?:[A-Z]|-)){', STR(?step1295), '}'), ''))))) - STRLEN(REPLACE(SUBSTR(?targetMotifMatchCigarQ9L1L8MF_01976283, 1, (STRLEN(?targetMotifMatchCigarQ9L1L8MF_01976283) - STRLEN(REPLACE(?targetMotifMatchCigarQ9L1L8MF_01976283, CONCAT('^(?:[a-z]*(?:[A-Z]|-)){', STR(?step1295), '}'), '')))), '[^-]', ''))) AS ?step2296) . BIND(((?step2296 + ?targetMotifMatchRegionMatchBeginPositionMF_01976284) - 1) AS ?thisPositionOn96) . BIND(?this AS ?pfs4t297) . BIND(URI(CONCAT(STR(?thisSequence), '#position', STR(?thisPositionOn95))) AS ?pfsb92) . BIND(URI(CONCAT(STR(?thisSequence), '#position', STR(?thisPositionOn96))) AS ?pfse93) . FILTER (REGEX('[RK][ARNDCQEGHILKMFPSTWYVBZJUOX]', SUBSTR(?thisSequenceValue, ?thisPositionOn95, (?thisPositionOn96 - ?thisPositionOn95)))) . BIND(URI(CONCAT(STR(?this), '#MF_01976a91')) AS ?annotation91) . BIND(?this AS ?pfs90) . } OPTIONAL { ?this up:sequence ?thisSequence . ?thisSequence rdf:value ?thisSequenceValue . ?templateMotifMatch302 faldo:location ?templateMotifSequenceMatchRegionQ9L1L8303 ; edam:is_output_of ?templateMotifSequenceProfileAlignmentOperationQ9L1L8305 ; rdf:type edam:data_0869 ; rdf:value ?templateMotifCigarQ9L1L8MF_01976298 . ?templateMotifSequenceMatchRegionQ9L1L8303 faldo:begin ?templateMotifSequenceMatchBeginQ9L1L8304 . ?templateMotifSequenceMatchBeginQ9L1L8304 faldo:position ?templateMotifSequenceMatchBeginPositionQ9L1L8299 ; faldo:reference isoform:Q9L1L8-1 . ?templateMotifSequenceProfileAlignmentOperationQ9L1L8305 edam:has_input signature:MF_01976 ; rdf:type edam:operation_0300 . ?targetMotifMatch306 faldo:location ?targetMotifMatchRegionMatch307 ; edam:is_output_of ?targetMotifSequenceAlignmentOperationMF_01976309 ; rdf:type edam:data_0869 ; rdf:value ?targetMotifMatchCigarQ9L1L8MF_01976300 . ?targetMotifMatchRegionMatch307 faldo:begin ?targetMotifMatchRegionMatchBeginMF_01976308 . ?targetMotifMatchRegionMatchBeginMF_01976308 faldo:position ?targetMotifMatchRegionMatchBeginPositionMF_01976301 ; faldo:reference ?thisSequence . ?targetMotifSequenceAlignmentOperationMF_01976309 edam:has_input signature:MF_01976 ; rdf:type edam:operation_0300 . BIND(STRLEN(REPLACE(SUBSTR(?templateMotifCigarQ9L1L8MF_01976298, 1, (STRLEN(?templateMotifCigarQ9L1L8MF_01976298) - STRLEN(REPLACE(?templateMotifCigarQ9L1L8MF_01976298, CONCAT('^(?:-*[^-]){', STR(((102 - ?templateMotifSequenceMatchBeginPositionQ9L1L8299) + 1)), '}'), '')))), '[a-z]', '')) AS ?step1310) . BIND((STRLEN(SUBSTR(?targetMotifMatchCigarQ9L1L8MF_01976300, 1, (STRLEN(?targetMotifMatchCigarQ9L1L8MF_01976300) - STRLEN(REPLACE(?targetMotifMatchCigarQ9L1L8MF_01976300, CONCAT('^(?:[a-z]*(?:[A-Z]|-)){', STR(?step1310), '}'), ''))))) - STRLEN(REPLACE(SUBSTR(?targetMotifMatchCigarQ9L1L8MF_01976300, 1, (STRLEN(?targetMotifMatchCigarQ9L1L8MF_01976300) - STRLEN(REPLACE(?targetMotifMatchCigarQ9L1L8MF_01976300, CONCAT('^(?:[a-z]*(?:[A-Z]|-)){', STR(?step1310), '}'), '')))), '[^-]', ''))) AS ?step2311) . BIND(((?step2311 + ?targetMotifMatchRegionMatchBeginPositionMF_01976301) - 1) AS ?thisPositionOn102) . BIND(STRLEN(REPLACE(SUBSTR(?templateMotifCigarQ9L1L8MF_01976298, 1, (STRLEN(?templateMotifCigarQ9L1L8MF_01976298) - STRLEN(REPLACE(?templateMotifCigarQ9L1L8MF_01976298, CONCAT('^(?:-*[^-]){', STR(((105 - ?templateMotifSequenceMatchBeginPositionQ9L1L8299) + 1)), '}'), '')))), '[a-z]', '')) AS ?step1312) . BIND((STRLEN(SUBSTR(?targetMotifMatchCigarQ9L1L8MF_01976300, 1, (STRLEN(?targetMotifMatchCigarQ9L1L8MF_01976300) - STRLEN(REPLACE(?targetMotifMatchCigarQ9L1L8MF_01976300, CONCAT('^(?:[a-z]*(?:[A-Z]|-)){', STR(?step1312), '}'), ''))))) - STRLEN(REPLACE(SUBSTR(?targetMotifMatchCigarQ9L1L8MF_01976300, 1, (STRLEN(?targetMotifMatchCigarQ9L1L8MF_01976300) - STRLEN(REPLACE(?targetMotifMatchCigarQ9L1L8MF_01976300, CONCAT('^(?:[a-z]*(?:[A-Z]|-)){', STR(?step1312), '}'), '')))), '[^-]', ''))) AS ?step2313) . BIND(((?step2313 + ?targetMotifMatchRegionMatchBeginPositionMF_01976301) - 1) AS ?thisPositionOn103) . BIND(?this AS ?pfs4t314) . BIND(URI(CONCAT(STR(?thisSequence), '#position', STR(?thisPositionOn102))) AS ?pfsb99) . BIND(URI(CONCAT(STR(?thisSequence), '#position', STR(?thisPositionOn103))) AS ?pfse100) . FILTER (REGEX('G[DEN]G[ST]', SUBSTR(?thisSequenceValue, ?thisPositionOn102, (?thisPositionOn103 - ?thisPositionOn102)))) . BIND(URI(CONCAT(STR(?this), '#MF_01976a98')) AS ?annotation98) . BIND(?this AS ?pfs97) . } OPTIONAL { ?this up:sequence ?thisSequence . ?thisSequence rdf:value ?thisSequenceValue . ?templateMotifMatch319 faldo:location ?templateMotifSequenceMatchRegionQ9L1L8320 ; edam:is_output_of ?templateMotifSequenceProfileAlignmentOperationQ9L1L8322 ; rdf:type edam:data_0869 ; rdf:value ?templateMotifCigarQ9L1L8MF_01976315 . ?templateMotifSequenceMatchRegionQ9L1L8320 faldo:begin ?templateMotifSequenceMatchBeginQ9L1L8321 . ?templateMotifSequenceMatchBeginQ9L1L8321 faldo:position ?templateMotifSequenceMatchBeginPositionQ9L1L8316 ; faldo:reference isoform:Q9L1L8-1 . ?templateMotifSequenceProfileAlignmentOperationQ9L1L8322 edam:has_input signature:MF_01976 ; rdf:type edam:operation_0300 . ?targetMotifMatch323 faldo:location ?targetMotifMatchRegionMatch324 ; edam:is_output_of ?targetMotifSequenceAlignmentOperationMF_01976326 ; rdf:type edam:data_0869 ; rdf:value ?targetMotifMatchCigarQ9L1L8MF_01976317 . ?targetMotifMatchRegionMatch324 faldo:begin ?targetMotifMatchRegionMatchBeginMF_01976325 . ?targetMotifMatchRegionMatchBeginMF_01976325 faldo:position ?targetMotifMatchRegionMatchBeginPositionMF_01976318 ; faldo:reference ?thisSequence . ?targetMotifSequenceAlignmentOperationMF_01976326 edam:has_input signature:MF_01976 ; rdf:type edam:operation_0300 . BIND(STRLEN(REPLACE(SUBSTR(?templateMotifCigarQ9L1L8MF_01976315, 1, (STRLEN(?templateMotifCigarQ9L1L8MF_01976315) - STRLEN(REPLACE(?templateMotifCigarQ9L1L8MF_01976315, CONCAT('^(?:-*[^-]){', STR(((10 - ?templateMotifSequenceMatchBeginPositionQ9L1L8316) + 1)), '}'), '')))), '[a-z]', '')) AS ?step1327) . BIND((STRLEN(SUBSTR(?targetMotifMatchCigarQ9L1L8MF_01976317, 1, (STRLEN(?targetMotifMatchCigarQ9L1L8MF_01976317) - STRLEN(REPLACE(?targetMotifMatchCigarQ9L1L8MF_01976317, CONCAT('^(?:[a-z]*(?:[A-Z]|-)){', STR(?step1327), '}'), ''))))) - STRLEN(REPLACE(SUBSTR(?targetMotifMatchCigarQ9L1L8MF_01976317, 1, (STRLEN(?targetMotifMatchCigarQ9L1L8MF_01976317) - STRLEN(REPLACE(?targetMotifMatchCigarQ9L1L8MF_01976317, CONCAT('^(?:[a-z]*(?:[A-Z]|-)){', STR(?step1327), '}'), '')))), '[^-]', ''))) AS ?step2328) . BIND(((?step2328 + ?targetMotifMatchRegionMatchBeginPositionMF_01976318) - 1) AS ?thisPositionOn109) . BIND(?thisPositionOn109 AS ?thisPositionOn110) . BIND(?this AS ?pfs4t329) . BIND(URI(CONCAT(STR(?thisSequence), '#position', STR(?thisPositionOn109))) AS ?pfsb106) . BIND(URI(CONCAT(STR(?thisSequence), '#position', STR(?thisPositionOn110))) AS ?pfse107) . FILTER ((SUBSTR(?thisSequenceValue, ?thisPositionOn109, 1) = 'G')) . BIND(URI(CONCAT(STR(?this), '#MF_01976a105')) AS ?annotation105) . BIND(?this AS ?pfs104) . } OPTIONAL { ?this up:sequence ?thisSequence . ?thisSequence rdf:value ?thisSequenceValue . ?templateMotifMatch334 faldo:location ?templateMotifSequenceMatchRegionQ59126335 ; edam:is_output_of ?templateMotifSequenceProfileAlignmentOperationQ59126337 ; rdf:type edam:data_0869 ; rdf:value ?templateMotifCigarQ59126MF_01976330 . ?templateMotifSequenceMatchRegionQ59126335 faldo:begin ?templateMotifSequenceMatchBeginQ59126336 . ?templateMotifSequenceMatchBeginQ59126336 faldo:position ?templateMotifSequenceMatchBeginPositionQ59126331 ; faldo:reference isoform:Q59126-1 . ?templateMotifSequenceProfileAlignmentOperationQ59126337 edam:has_input signature:MF_01976 ; rdf:type edam:operation_0300 . ?targetMotifMatch338 faldo:location ?targetMotifMatchRegionMatch339 ; edam:is_output_of ?targetMotifSequenceAlignmentOperationMF_01976341 ; rdf:type edam:data_0869 ; rdf:value ?targetMotifMatchCigarQ59126MF_01976332 . ?targetMotifMatchRegionMatch339 faldo:begin ?targetMotifMatchRegionMatchBeginMF_01976340 . ?targetMotifMatchRegionMatchBeginMF_01976340 faldo:position ?targetMotifMatchRegionMatchBeginPositionMF_01976333 ; faldo:reference ?thisSequence . ?targetMotifSequenceAlignmentOperationMF_01976341 edam:has_input signature:MF_01976 ; rdf:type edam:operation_0300 . BIND(STRLEN(REPLACE(SUBSTR(?templateMotifCigarQ59126MF_01976330, 1, (STRLEN(?templateMotifCigarQ59126MF_01976330) - STRLEN(REPLACE(?templateMotifCigarQ59126MF_01976330, CONCAT('^(?:-*[^-]){', STR(((10 - ?templateMotifSequenceMatchBeginPositionQ59126331) + 1)), '}'), '')))), '[a-z]', '')) AS ?step1342) . BIND((STRLEN(SUBSTR(?targetMotifMatchCigarQ59126MF_01976332, 1, (STRLEN(?targetMotifMatchCigarQ59126MF_01976332) - STRLEN(REPLACE(?targetMotifMatchCigarQ59126MF_01976332, CONCAT('^(?:[a-z]*(?:[A-Z]|-)){', STR(?step1342), '}'), ''))))) - STRLEN(REPLACE(SUBSTR(?targetMotifMatchCigarQ59126MF_01976332, 1, (STRLEN(?targetMotifMatchCigarQ59126MF_01976332) - STRLEN(REPLACE(?targetMotifMatchCigarQ59126MF_01976332, CONCAT('^(?:[a-z]*(?:[A-Z]|-)){', STR(?step1342), '}'), '')))), '[^-]', ''))) AS ?step2343) . BIND(((?step2343 + ?targetMotifMatchRegionMatchBeginPositionMF_01976333) - 1) AS ?thisPositionOn116) . BIND(?thisPositionOn116 AS ?thisPositionOn117) . BIND(?this AS ?pfs5t344) . BIND(URI(CONCAT(STR(?thisSequence), '#position', STR(?thisPositionOn116))) AS ?pfsb113) . BIND(URI(CONCAT(STR(?thisSequence), '#position', STR(?thisPositionOn117))) AS ?pfse114) . FILTER ((SUBSTR(?thisSequenceValue, ?thisPositionOn116, 1) = 'G')) . BIND(URI(CONCAT(STR(?this), '#MF_01976a112')) AS ?annotation112) . BIND(?this AS ?pfs111) . } OPTIONAL { ?this up:sequence ?thisSequence . ?thisSequence rdf:value ?thisSequenceValue . ?templateMotifMatch349 faldo:location ?templateMotifSequenceMatchRegionQ59126350 ; edam:is_output_of ?templateMotifSequenceProfileAlignmentOperationQ59126352 ; rdf:type edam:data_0869 ; rdf:value ?templateMotifCigarQ59126MF_01976345 . ?templateMotifSequenceMatchRegionQ59126350 faldo:begin ?templateMotifSequenceMatchBeginQ59126351 . ?templateMotifSequenceMatchBeginQ59126351 faldo:position ?templateMotifSequenceMatchBeginPositionQ59126346 ; faldo:reference isoform:Q59126-1 . ?templateMotifSequenceProfileAlignmentOperationQ59126352 edam:has_input signature:MF_01976 ; rdf:type edam:operation_0300 . ?targetMotifMatch353 faldo:location ?targetMotifMatchRegionMatch354 ; edam:is_output_of ?targetMotifSequenceAlignmentOperationMF_01976356 ; rdf:type edam:data_0869 ; rdf:value ?targetMotifMatchCigarQ59126MF_01976347 . ?targetMotifMatchRegionMatch354 faldo:begin ?targetMotifMatchRegionMatchBeginMF_01976355 . ?targetMotifMatchRegionMatchBeginMF_01976355 faldo:position ?targetMotifMatchRegionMatchBeginPositionMF_01976348 ; faldo:reference ?thisSequence . ?targetMotifSequenceAlignmentOperationMF_01976356 edam:has_input signature:MF_01976 ; rdf:type edam:operation_0300 . BIND(STRLEN(REPLACE(SUBSTR(?templateMotifCigarQ59126MF_01976345, 1, (STRLEN(?templateMotifCigarQ59126MF_01976345) - STRLEN(REPLACE(?templateMotifCigarQ59126MF_01976345, CONCAT('^(?:-*[^-]){', STR(((124 - ?templateMotifSequenceMatchBeginPositionQ59126346) + 1)), '}'), '')))), '[a-z]', '')) AS ?step1357) . BIND((STRLEN(SUBSTR(?targetMotifMatchCigarQ59126MF_01976347, 1, (STRLEN(?targetMotifMatchCigarQ59126MF_01976347) - STRLEN(REPLACE(?targetMotifMatchCigarQ59126MF_01976347, CONCAT('^(?:[a-z]*(?:[A-Z]|-)){', STR(?step1357), '}'), ''))))) - STRLEN(REPLACE(SUBSTR(?targetMotifMatchCigarQ59126MF_01976347, 1, (STRLEN(?targetMotifMatchCigarQ59126MF_01976347) - STRLEN(REPLACE(?targetMotifMatchCigarQ59126MF_01976347, CONCAT('^(?:[a-z]*(?:[A-Z]|-)){', STR(?step1357), '}'), '')))), '[^-]', ''))) AS ?step2358) . BIND(((?step2358 + ?targetMotifMatchRegionMatchBeginPositionMF_01976348) - 1) AS ?thisPositionOn122) . BIND(?thisPositionOn122 AS ?thisPositionOn123) . BIND(?this AS ?pfs5t359) . BIND(URI(CONCAT(STR(?thisSequence), '#position', STR(?thisPositionOn122))) AS ?pfsb120) . BIND(URI(CONCAT(STR(?thisSequence), '#position', STR(?thisPositionOn123))) AS ?pfse121) . FILTER ((SUBSTR(?thisSequenceValue, ?thisPositionOn122, 1) = 'K')) . BIND(URI(CONCAT(STR(?this), '#MF_01976a119')) AS ?annotation119) . BIND(?this AS ?pfs118) . } OPTIONAL { ?this a up:Protein . BIND(?this AS ?caseWithTag360) . } BIND(IF(BOUND(?tagATP), ?caseWithTag360, ?UNBOUND_VARIABLE) AS ?case6) . OPTIONAL { ?this a up:Protein . BIND(?this AS ?caseWithTag361) . BIND(URI(CONCAT(STR(?this), '#MF_01976a8')) AS ?name8) . BIND(URI(CONCAT(STR(?this), '#MF_01976a9')) AS ?name9) . BIND(URI(CONCAT(STR(?this), '#MF_01976a10')) AS ?name10) . BIND(URI(CONCAT(STR(?this), '#MF_01976a11')) AS ?name11) . } BIND(IF(BOUND(?tagPPI), ?caseWithTag361, ?UNBOUND_VARIABLE) AS ?case7) . OPTIONAL { ?this a up:Protein . BIND(?this AS ?caseWithTag362) . BIND(URI(CONCAT(STR(?this), '#MF_01976a13')) AS ?name13) . BIND(URI(CONCAT(STR(?this), '#MF_01976a14')) AS ?name14) . } BIND(IF((BOUND(?tagATP) || BOUND(?tagPPI)), ?caseWithTag362, ?UNBOUND_VARIABLE) AS ?case12) . OPTIONAL { ?this a up:Protein . BIND(?this AS ?caseWithTag363) . BIND(URI(CONCAT(STR(?this), '#MF_01976a16')) AS ?name16) . } BIND(IF((BOUND(?tagATP) || BOUND(?tagPPI)), ?caseWithTag363, ?UNBOUND_VARIABLE) AS ?case15) . }