CONSTRUCT { _:754291 up:source unirule:MF_02123 . _:754292 up:source unirule:MF_02123 . _:754293 up:source unirule:MF_02123 . _:754294 up:source unirule:MF_02123 . _:754295 up:source unirule:MF_02123 . _:754296 up:source unirule:MF_02123 . _:754297 up:source unirule:MF_02123 . _:754298 up:source unirule:MF_02123 . _:754299 up:source unirule:MF_02123 . _:754300 up:source unirule:MF_02123 . _:754301 up:source unirule:MF_02123 . _:754302 up:source unirule:MF_02123 . _:754303 up:source unirule:MF_02123 . _:754304 up:source unirule:MF_02123 . _:754305 up:source unirule:MF_02123 . _:754306 up:source unirule:MF_02123 . _:754307 up:source unirule:MF_02123 . _:754308 up:source unirule:MF_02123 . _:754309 up:source unirule:MF_02123 . _:754310 up:source unirule:MF_02123 . _:754311 up:source unirule:MF_02123 . _:754312 up:source unirule:MF_02123 . ?this up:annotation ?annotation2 , ?annotation4 , ?annotation5 ; up:classifiedWith GO:0005975 , GO:0016614 , GO:0070967 , keyword:119 , keyword:560 ; up:recommendedName ?name0 . ?name0 up:ecName '1.1.98.2' ; up:fullName 'F420-dependent glucose-6-phosphate dehydrogenase' ; up:shortName 'FGD' , 'G6PD' ; rdf:type up:Structured_Name . ?gene1 skos:prefLabel 'fgd' . ?annotation2 up:activity ?activity3 ; rdf:type up:Catalytic_Activity_Annotation . ?activity3 up:catalyticActivity <http://rdf.rhea-db.org/27294>; up:enzymeClass <http://purl.uniprot.org/enzyme/1.1.98.2>. ?annotation4 a up:Subunit_Annotation ; rdfs:comment 'Homodimer.' . ?annotation5 a up:Similarity_Annotation ; rdfs:comment 'Belongs to the F420-dependent glucose-6-phosphate dehydrogenase family.' . ?pfs8 up:annotation ?annotation9 . ?annotation9 faldo:begin ?pfsb10 ; faldo:end ?pfse11 ; up:ligand ?ligand12 ; rdf:type up:Binding_Site_Annotation . ?pfsb10 faldo:position ?thisPositionOn13 ; rdf:type faldo:ExactPosition . ?pfse11 faldo:position ?thisPositionOn14 ; rdf:type faldo:ExactPosition . ?ligand12 rdfs:subClassOf chebi:133980 . ?pfs15 up:annotation ?annotation16 . ?annotation16 faldo:begin ?pfsb17 ; faldo:end ?pfse18 ; up:ligand ?ligand19 ; rdf:type up:Binding_Site_Annotation . ?pfsb17 faldo:position ?thisPositionOn20 ; rdf:type faldo:ExactPosition . ?pfse18 faldo:position ?thisPositionOn21 ; rdf:type faldo:ExactPosition . ?ligand19 rdfs:subClassOf chebi:133980 . ?pfs22 up:annotation ?annotation23 . ?annotation23 faldo:begin ?pfsb24 ; faldo:end ?pfse25 ; up:ligand ?ligand26 ; rdf:type up:Binding_Site_Annotation . ?pfsb24 faldo:position ?thisPositionOn27 ; rdf:type faldo:ExactPosition . ?pfse25 faldo:position ?thisPositionOn28 ; rdf:type faldo:ExactPosition . ?ligand26 rdfs:subClassOf chebi:133980 . ?pfs29 up:annotation ?annotation30 . ?annotation30 faldo:begin ?pfsb31 ; faldo:end ?pfse32 ; rdf:type up:Active_Site_Annotation ; rdfs:comment 'Proton donor' . ?pfsb31 faldo:position ?thisPositionOn33 ; rdf:type faldo:ExactPosition . ?pfse32 faldo:position ?thisPositionOn34 ; rdf:type faldo:ExactPosition . ?pfs35 up:annotation ?annotation36 . ?annotation36 faldo:begin ?pfsb37 ; faldo:end ?pfse38 ; rdf:type up:Active_Site_Annotation ; rdfs:comment 'Proton acceptor' . ?pfsb37 faldo:position ?thisPositionOn39 ; rdf:type faldo:ExactPosition . ?pfse38 faldo:position ?thisPositionOn40 ; rdf:type faldo:ExactPosition . ?pfs41 up:annotation ?annotation42 . ?annotation42 faldo:begin ?pfsb43 ; faldo:end ?pfse44 ; up:ligand ?ligand45 ; rdf:type up:Binding_Site_Annotation . ?pfsb43 faldo:position ?thisPositionOn46 ; rdf:type faldo:ExactPosition . ?pfse44 faldo:position ?thisPositionOn47 ; rdf:type faldo:ExactPosition . ?ligand45 rdfs:subClassOf chebi:133980 . ?pfs48 up:annotation ?annotation49 . ?annotation49 faldo:begin ?pfsb50 ; faldo:end ?pfse51 ; up:ligand ?ligand52 ; rdf:type up:Binding_Site_Annotation . ?pfsb50 faldo:position ?thisPositionOn53 ; rdf:type faldo:ExactPosition . ?pfse51 faldo:position ?thisPositionOn54 ; rdf:type faldo:ExactPosition . ?ligand52 rdfs:subClassOf chebi:133980 . ?pfs55 up:annotation ?annotation56 . ?annotation56 faldo:begin ?pfsb57 ; faldo:end ?pfse58 ; up:ligand ?ligand59 ; rdf:type up:Binding_Site_Annotation . ?pfsb57 faldo:position ?thisPositionOn60 ; rdf:type faldo:ExactPosition . ?pfse58 faldo:position ?thisPositionOn61 ; rdf:type faldo:ExactPosition . ?ligand59 rdfs:subClassOf chebi:133980 . ?pfs62 up:annotation ?annotation63 . ?annotation63 faldo:begin ?pfsb64 ; faldo:end ?pfse65 ; up:ligand ?ligand66 ; rdf:type up:Binding_Site_Annotation . ?pfsb64 faldo:position ?thisPositionOn68 ; rdf:type faldo:ExactPosition . ?pfse65 faldo:position ?thisPositionOn69 ; rdf:type faldo:ExactPosition . ?ligand66 rdfs:subClassOf ?molecule67 . ?molecule67 rdfs:label 'substrate' . ?pfs70 up:annotation ?annotation71 . ?annotation71 faldo:begin ?pfsb72 ; faldo:end ?pfse73 ; up:ligand ?ligand74 ; rdf:type up:Binding_Site_Annotation . ?pfsb72 faldo:position ?thisPositionOn76 ; rdf:type faldo:ExactPosition . ?pfse73 faldo:position ?thisPositionOn77 ; rdf:type faldo:ExactPosition . ?ligand74 rdfs:subClassOf ?molecule75 . ?molecule75 rdfs:label 'substrate' . ?pfs78 up:annotation ?annotation79 . ?annotation79 faldo:begin ?pfsb80 ; faldo:end ?pfse81 ; up:ligand ?ligand82 ; rdf:type up:Binding_Site_Annotation . ?pfsb80 faldo:position ?thisPositionOn84 ; rdf:type faldo:ExactPosition . ?pfse81 faldo:position ?thisPositionOn85 ; rdf:type faldo:ExactPosition . ?ligand82 rdfs:subClassOf ?molecule83 . ?molecule83 rdfs:label 'substrate' . ?pfs86 up:annotation ?annotation87 . ?annotation87 faldo:begin ?pfsb88 ; faldo:end ?pfse89 ; up:ligand ?ligand90 ; rdf:type up:Binding_Site_Annotation . ?pfsb88 faldo:position ?thisPositionOn92 ; rdf:type faldo:ExactPosition . ?pfse89 faldo:position ?thisPositionOn93 ; rdf:type faldo:ExactPosition . ?ligand90 rdfs:subClassOf ?molecule91 . ?molecule91 rdfs:label 'substrate' . _:754313 a rdf:Statement ; up:attribution _:754291 ; rdf:subject ?this ; rdf:predicate up:recommendedName ; rdf:object ?name0 . _:754314 a rdf:Statement ; up:attribution _:754292 ; rdf:subject ?gene1 ; rdf:predicate up:encodedBy ; rdf:object ?gene1 . _:754315 a rdf:Statement ; up:attribution _:754293 ; rdf:subject ?this ; rdf:predicate up:annotation ; rdf:object ?annotation2 . _:754316 a rdf:Statement ; up:attribution _:754294 ; rdf:subject ?this ; rdf:predicate up:annotation ; rdf:object ?annotation4 . _:754317 a rdf:Statement ; up:attribution _:754295 ; rdf:subject ?this ; rdf:predicate up:annotation ; rdf:object ?annotation5 . _:754318 a rdf:Statement ; up:attribution _:754296 ; rdf:subject ?this ; rdf:predicate up:classifiedWith ; rdf:object keyword:119 . _:754319 a rdf:Statement ; up:attribution _:754297 ; rdf:subject ?this ; rdf:predicate up:classifiedWith ; rdf:object keyword:560 . _:754320 a rdf:Statement ; up:attribution _:754298 ; rdf:subject ?this ; rdf:predicate up:classifiedWith ; rdf:object GO:0016614 . _:754321 a rdf:Statement ; up:attribution _:754299 ; rdf:subject ?this ; rdf:predicate up:classifiedWith ; rdf:object GO:0070967 . _:754322 a rdf:Statement ; up:attribution _:754300 ; rdf:subject ?this ; rdf:predicate up:classifiedWith ; rdf:object GO:0005975 . _:754323 a rdf:Statement ; up:source unirule:MF_02123 ; rdf:subject ?pfs8 ; rdf:predicate up:annotation ; rdf:object ?annotation9 . _:754324 a rdf:Statement ; up:attribution _:754301 ; rdf:subject ?pfs8 ; rdf:predicate up:annotation ; rdf:object ?annotation9 . _:754325 a rdf:Statement ; up:source unirule:MF_02123 ; rdf:subject ?pfs15 ; rdf:predicate up:annotation ; rdf:object ?annotation16 . _:754326 a rdf:Statement ; up:attribution _:754302 ; rdf:subject ?pfs15 ; rdf:predicate up:annotation ; rdf:object ?annotation16 . _:754327 a rdf:Statement ; up:source unirule:MF_02123 ; rdf:subject ?pfs22 ; rdf:predicate up:annotation ; rdf:object ?annotation23 . _:754328 a rdf:Statement ; up:attribution _:754303 ; rdf:subject ?pfs22 ; rdf:predicate up:annotation ; rdf:object ?annotation23 . _:754329 a rdf:Statement ; up:source unirule:MF_02123 ; rdf:subject ?pfs29 ; rdf:predicate up:annotation ; rdf:object ?annotation30 . _:754330 a rdf:Statement ; up:attribution _:754304 ; rdf:subject ?pfs29 ; rdf:predicate up:annotation ; rdf:object ?annotation30 . _:754331 a rdf:Statement ; up:source unirule:MF_02123 ; rdf:subject ?pfs35 ; rdf:predicate up:annotation ; rdf:object ?annotation36 . _:754332 a rdf:Statement ; up:attribution _:754305 ; rdf:subject ?pfs35 ; rdf:predicate up:annotation ; rdf:object ?annotation36 . _:754333 a rdf:Statement ; up:source unirule:MF_02123 ; rdf:subject ?pfs41 ; rdf:predicate up:annotation ; rdf:object ?annotation42 . _:754334 a rdf:Statement ; up:attribution _:754306 ; rdf:subject ?pfs41 ; rdf:predicate up:annotation ; rdf:object ?annotation42 . _:754335 a rdf:Statement ; up:source unirule:MF_02123 ; rdf:subject ?pfs48 ; rdf:predicate up:annotation ; rdf:object ?annotation49 . _:754336 a rdf:Statement ; up:attribution _:754307 ; rdf:subject ?pfs48 ; rdf:predicate up:annotation ; rdf:object ?annotation49 . _:754337 a rdf:Statement ; up:source unirule:MF_02123 ; rdf:subject ?pfs55 ; rdf:predicate up:annotation ; rdf:object ?annotation56 . _:754338 a rdf:Statement ; up:attribution _:754308 ; rdf:subject ?pfs55 ; rdf:predicate up:annotation ; rdf:object ?annotation56 . _:754339 a rdf:Statement ; up:source unirule:MF_02123 ; rdf:subject ?pfs62 ; rdf:predicate up:annotation ; rdf:object ?annotation63 . _:754340 a rdf:Statement ; up:attribution _:754309 ; rdf:subject ?pfs62 ; rdf:predicate up:annotation ; rdf:object ?annotation63 . _:754341 a rdf:Statement ; up:source unirule:MF_02123 ; rdf:subject ?pfs70 ; rdf:predicate up:annotation ; rdf:object ?annotation71 . _:754342 a rdf:Statement ; up:attribution _:754310 ; rdf:subject ?pfs70 ; rdf:predicate up:annotation ; rdf:object ?annotation71 . _:754343 a rdf:Statement ; up:source unirule:MF_02123 ; rdf:subject ?pfs78 ; rdf:predicate up:annotation ; rdf:object ?annotation79 . _:754344 a rdf:Statement ; up:attribution _:754311 ; rdf:subject ?pfs78 ; rdf:predicate up:annotation ; rdf:object ?annotation79 . _:754345 a rdf:Statement ; up:source unirule:MF_02123 ; rdf:subject ?pfs86 ; rdf:predicate up:annotation ; rdf:object ?annotation87 . _:754346 a rdf:Statement ; up:attribution _:754312 ; rdf:subject ?pfs86 ; rdf:predicate up:annotation ; rdf:object ?annotation87 . } WHERE { #baseURI: http://purl.uniprot.org/unirule/MF_02123 #Rule MF_02123 Created by:? on:2011-08-29 Modified by:Edouard de Castro on:2024-09-02 ?this up:organism ?thisOrganism ; rdfs:seeAlso signature:MF_02123 . ?thisOrganism rdfs:subClassOf+ taxon:201174 . BIND(URI(CONCAT(STR(?this), '#MF_02123a0')) AS ?name0) . BIND(URI(CONCAT(STR(?this), '#MF_02123a2')) AS ?annotation2) . BIND(URI(CONCAT(STR(?this), '#MF_02123a4')) AS ?annotation4) . BIND(URI(CONCAT(STR(?this), '#MF_02123a5')) AS ?annotation5) . OPTIONAL { ?this up:sequence ?thisSequence . ?thisSequence rdf:value ?thisSequenceValue . ?templateMotifMatch98 faldo:location ?templateMotifSequenceMatchRegionP9WNE199 ; edam:is_output_of ?templateMotifSequenceProfileAlignmentOperationP9WNE1101 ; rdf:type edam:data_0869 ; rdf:value ?templateMotifCigarP9WNE1MF_0212394 . ?templateMotifSequenceMatchRegionP9WNE199 faldo:begin ?templateMotifSequenceMatchBeginP9WNE1100 . ?templateMotifSequenceMatchBeginP9WNE1100 faldo:position ?templateMotifSequenceMatchBeginPositionP9WNE195 ; faldo:reference isoform:P9WNE1-1 . ?templateMotifSequenceProfileAlignmentOperationP9WNE1101 edam:has_input signature:MF_02123 ; rdf:type edam:operation_0300 . ?targetMotifMatch102 faldo:location ?targetMotifMatchRegionMatch103 ; edam:is_output_of ?targetMotifSequenceAlignmentOperationMF_02123105 ; rdf:type edam:data_0869 ; rdf:value ?targetMotifMatchCigarP9WNE1MF_0212396 . ?targetMotifMatchRegionMatch103 faldo:begin ?targetMotifMatchRegionMatchBeginMF_02123104 . ?targetMotifMatchRegionMatchBeginMF_02123104 faldo:position ?targetMotifMatchRegionMatchBeginPositionMF_0212397 ; faldo:reference ?thisSequence . ?targetMotifSequenceAlignmentOperationMF_02123105 edam:has_input signature:MF_02123 ; rdf:type edam:operation_0300 . BIND(STRLEN(REPLACE(SUBSTR(?templateMotifCigarP9WNE1MF_0212394, 1, (STRLEN(?templateMotifCigarP9WNE1MF_0212394) - STRLEN(REPLACE(?templateMotifCigarP9WNE1MF_0212394, CONCAT('^(?:-*[^-]){', STR(((107 - ?templateMotifSequenceMatchBeginPositionP9WNE195) + 1)), '}'), '')))), '[a-z]', '')) AS ?step1106) . BIND((STRLEN(SUBSTR(?targetMotifMatchCigarP9WNE1MF_0212396, 1, (STRLEN(?targetMotifMatchCigarP9WNE1MF_0212396) - STRLEN(REPLACE(?targetMotifMatchCigarP9WNE1MF_0212396, CONCAT('^(?:[a-z]*(?:[A-Z]|-)){', STR(?step1106), '}'), ''))))) - STRLEN(REPLACE(SUBSTR(?targetMotifMatchCigarP9WNE1MF_0212396, 1, (STRLEN(?targetMotifMatchCigarP9WNE1MF_0212396) - STRLEN(REPLACE(?targetMotifMatchCigarP9WNE1MF_0212396, CONCAT('^(?:[a-z]*(?:[A-Z]|-)){', STR(?step1106), '}'), '')))), '[^-]', ''))) AS ?step2107) . BIND(((?step2107 + ?targetMotifMatchRegionMatchBeginPositionMF_0212397) - 1) AS ?thisPositionOn13) . BIND(STRLEN(REPLACE(SUBSTR(?templateMotifCigarP9WNE1MF_0212394, 1, (STRLEN(?templateMotifCigarP9WNE1MF_0212394) - STRLEN(REPLACE(?templateMotifCigarP9WNE1MF_0212394, CONCAT('^(?:-*[^-]){', STR(((108 - ?templateMotifSequenceMatchBeginPositionP9WNE195) + 1)), '}'), '')))), '[a-z]', '')) AS ?step1108) . BIND((STRLEN(SUBSTR(?targetMotifMatchCigarP9WNE1MF_0212396, 1, (STRLEN(?targetMotifMatchCigarP9WNE1MF_0212396) - STRLEN(REPLACE(?targetMotifMatchCigarP9WNE1MF_0212396, CONCAT('^(?:[a-z]*(?:[A-Z]|-)){', STR(?step1108), '}'), ''))))) - STRLEN(REPLACE(SUBSTR(?targetMotifMatchCigarP9WNE1MF_0212396, 1, (STRLEN(?targetMotifMatchCigarP9WNE1MF_0212396) - STRLEN(REPLACE(?targetMotifMatchCigarP9WNE1MF_0212396, CONCAT('^(?:[a-z]*(?:[A-Z]|-)){', STR(?step1108), '}'), '')))), '[^-]', ''))) AS ?step2109) . BIND(((?step2109 + ?targetMotifMatchRegionMatchBeginPositionMF_0212397) - 1) AS ?thisPositionOn14) . BIND(?this AS ?pfs1t110) . BIND(URI(CONCAT(STR(?thisSequence), '#position', STR(?thisPositionOn13))) AS ?pfsb10) . BIND(URI(CONCAT(STR(?thisSequence), '#position', STR(?thisPositionOn14))) AS ?pfse11) . FILTER (REGEX('[TS]G', SUBSTR(?thisSequenceValue, ?thisPositionOn13, (?thisPositionOn14 - ?thisPositionOn13)))) . BIND(URI(CONCAT(STR(?this), '#MF_02123a9')) AS ?annotation9) . BIND(?this AS ?pfs8) . } OPTIONAL { ?this up:sequence ?thisSequence . ?thisSequence rdf:value ?thisSequenceValue . ?templateMotifMatch115 faldo:location ?templateMotifSequenceMatchRegionP9WNE1116 ; edam:is_output_of ?templateMotifSequenceProfileAlignmentOperationP9WNE1118 ; rdf:type edam:data_0869 ; rdf:value ?templateMotifCigarP9WNE1MF_02123111 . ?templateMotifSequenceMatchRegionP9WNE1116 faldo:begin ?templateMotifSequenceMatchBeginP9WNE1117 . ?templateMotifSequenceMatchBeginP9WNE1117 faldo:position ?templateMotifSequenceMatchBeginPositionP9WNE1112 ; faldo:reference isoform:P9WNE1-1 . ?templateMotifSequenceProfileAlignmentOperationP9WNE1118 edam:has_input signature:MF_02123 ; rdf:type edam:operation_0300 . ?targetMotifMatch119 faldo:location ?targetMotifMatchRegionMatch120 ; edam:is_output_of ?targetMotifSequenceAlignmentOperationMF_02123122 ; rdf:type edam:data_0869 ; rdf:value ?targetMotifMatchCigarP9WNE1MF_02123113 . ?targetMotifMatchRegionMatch120 faldo:begin ?targetMotifMatchRegionMatchBeginMF_02123121 . ?targetMotifMatchRegionMatchBeginMF_02123121 faldo:position ?targetMotifMatchRegionMatchBeginPositionMF_02123114 ; faldo:reference ?thisSequence . ?targetMotifSequenceAlignmentOperationMF_02123122 edam:has_input signature:MF_02123 ; rdf:type edam:operation_0300 . BIND(STRLEN(REPLACE(SUBSTR(?templateMotifCigarP9WNE1MF_02123111, 1, (STRLEN(?templateMotifCigarP9WNE1MF_02123111) - STRLEN(REPLACE(?templateMotifCigarP9WNE1MF_02123111, CONCAT('^(?:-*[^-]){', STR(((177 - ?templateMotifSequenceMatchBeginPositionP9WNE1112) + 1)), '}'), '')))), '[a-z]', '')) AS ?step1123) . BIND((STRLEN(SUBSTR(?targetMotifMatchCigarP9WNE1MF_02123113, 1, (STRLEN(?targetMotifMatchCigarP9WNE1MF_02123113) - STRLEN(REPLACE(?targetMotifMatchCigarP9WNE1MF_02123113, CONCAT('^(?:[a-z]*(?:[A-Z]|-)){', STR(?step1123), '}'), ''))))) - STRLEN(REPLACE(SUBSTR(?targetMotifMatchCigarP9WNE1MF_02123113, 1, (STRLEN(?targetMotifMatchCigarP9WNE1MF_02123113) - STRLEN(REPLACE(?targetMotifMatchCigarP9WNE1MF_02123113, CONCAT('^(?:[a-z]*(?:[A-Z]|-)){', STR(?step1123), '}'), '')))), '[^-]', ''))) AS ?step2124) . BIND(((?step2124 + ?targetMotifMatchRegionMatchBeginPositionMF_02123114) - 1) AS ?thisPositionOn20) . BIND(STRLEN(REPLACE(SUBSTR(?templateMotifCigarP9WNE1MF_02123111, 1, (STRLEN(?templateMotifCigarP9WNE1MF_02123111) - STRLEN(REPLACE(?templateMotifCigarP9WNE1MF_02123111, CONCAT('^(?:-*[^-]){', STR(((178 - ?templateMotifSequenceMatchBeginPositionP9WNE1112) + 1)), '}'), '')))), '[a-z]', '')) AS ?step1125) . BIND((STRLEN(SUBSTR(?targetMotifMatchCigarP9WNE1MF_02123113, 1, (STRLEN(?targetMotifMatchCigarP9WNE1MF_02123113) - STRLEN(REPLACE(?targetMotifMatchCigarP9WNE1MF_02123113, CONCAT('^(?:[a-z]*(?:[A-Z]|-)){', STR(?step1125), '}'), ''))))) - STRLEN(REPLACE(SUBSTR(?targetMotifMatchCigarP9WNE1MF_02123113, 1, (STRLEN(?targetMotifMatchCigarP9WNE1MF_02123113) - STRLEN(REPLACE(?targetMotifMatchCigarP9WNE1MF_02123113, CONCAT('^(?:[a-z]*(?:[A-Z]|-)){', STR(?step1125), '}'), '')))), '[^-]', ''))) AS ?step2126) . BIND(((?step2126 + ?targetMotifMatchRegionMatchBeginPositionMF_02123114) - 1) AS ?thisPositionOn21) . BIND(?this AS ?pfs1t127) . BIND(URI(CONCAT(STR(?thisSequence), '#position', STR(?thisPositionOn20))) AS ?pfsb17) . BIND(URI(CONCAT(STR(?thisSequence), '#position', STR(?thisPositionOn21))) AS ?pfse18) . FILTER (REGEX('[GS]G', SUBSTR(?thisSequenceValue, ?thisPositionOn20, (?thisPositionOn21 - ?thisPositionOn20)))) . BIND(URI(CONCAT(STR(?this), '#MF_02123a16')) AS ?annotation16) . BIND(?this AS ?pfs15) . } OPTIONAL { ?this up:sequence ?thisSequence . ?thisSequence rdf:value ?thisSequenceValue . ?templateMotifMatch132 faldo:location ?templateMotifSequenceMatchRegionP9WNE1133 ; edam:is_output_of ?templateMotifSequenceProfileAlignmentOperationP9WNE1135 ; rdf:type edam:data_0869 ; rdf:value ?templateMotifCigarP9WNE1MF_02123128 . ?templateMotifSequenceMatchRegionP9WNE1133 faldo:begin ?templateMotifSequenceMatchBeginP9WNE1134 . ?templateMotifSequenceMatchBeginP9WNE1134 faldo:position ?templateMotifSequenceMatchBeginPositionP9WNE1129 ; faldo:reference isoform:P9WNE1-1 . ?templateMotifSequenceProfileAlignmentOperationP9WNE1135 edam:has_input signature:MF_02123 ; rdf:type edam:operation_0300 . ?targetMotifMatch136 faldo:location ?targetMotifMatchRegionMatch137 ; edam:is_output_of ?targetMotifSequenceAlignmentOperationMF_02123139 ; rdf:type edam:data_0869 ; rdf:value ?targetMotifMatchCigarP9WNE1MF_02123130 . ?targetMotifMatchRegionMatch137 faldo:begin ?targetMotifMatchRegionMatchBeginMF_02123138 . ?targetMotifMatchRegionMatchBeginMF_02123138 faldo:position ?targetMotifMatchRegionMatchBeginPositionMF_02123131 ; faldo:reference ?thisSequence . ?targetMotifSequenceAlignmentOperationMF_02123139 edam:has_input signature:MF_02123 ; rdf:type edam:operation_0300 . BIND(STRLEN(REPLACE(SUBSTR(?templateMotifCigarP9WNE1MF_02123128, 1, (STRLEN(?templateMotifCigarP9WNE1MF_02123128) - STRLEN(REPLACE(?templateMotifCigarP9WNE1MF_02123128, CONCAT('^(?:-*[^-]){', STR(((180 - ?templateMotifSequenceMatchBeginPositionP9WNE1129) + 1)), '}'), '')))), '[a-z]', '')) AS ?step1140) . BIND((STRLEN(SUBSTR(?targetMotifMatchCigarP9WNE1MF_02123130, 1, (STRLEN(?targetMotifMatchCigarP9WNE1MF_02123130) - STRLEN(REPLACE(?targetMotifMatchCigarP9WNE1MF_02123130, CONCAT('^(?:[a-z]*(?:[A-Z]|-)){', STR(?step1140), '}'), ''))))) - STRLEN(REPLACE(SUBSTR(?targetMotifMatchCigarP9WNE1MF_02123130, 1, (STRLEN(?targetMotifMatchCigarP9WNE1MF_02123130) - STRLEN(REPLACE(?targetMotifMatchCigarP9WNE1MF_02123130, CONCAT('^(?:[a-z]*(?:[A-Z]|-)){', STR(?step1140), '}'), '')))), '[^-]', ''))) AS ?step2141) . BIND(((?step2141 + ?targetMotifMatchRegionMatchBeginPositionMF_02123131) - 1) AS ?thisPositionOn27) . BIND(STRLEN(REPLACE(SUBSTR(?templateMotifCigarP9WNE1MF_02123128, 1, (STRLEN(?templateMotifCigarP9WNE1MF_02123128) - STRLEN(REPLACE(?templateMotifCigarP9WNE1MF_02123128, CONCAT('^(?:-*[^-]){', STR(((181 - ?templateMotifSequenceMatchBeginPositionP9WNE1129) + 1)), '}'), '')))), '[a-z]', '')) AS ?step1142) . BIND((STRLEN(SUBSTR(?targetMotifMatchCigarP9WNE1MF_02123130, 1, (STRLEN(?targetMotifMatchCigarP9WNE1MF_02123130) - STRLEN(REPLACE(?targetMotifMatchCigarP9WNE1MF_02123130, CONCAT('^(?:[a-z]*(?:[A-Z]|-)){', STR(?step1142), '}'), ''))))) - STRLEN(REPLACE(SUBSTR(?targetMotifMatchCigarP9WNE1MF_02123130, 1, (STRLEN(?targetMotifMatchCigarP9WNE1MF_02123130) - STRLEN(REPLACE(?targetMotifMatchCigarP9WNE1MF_02123130, CONCAT('^(?:[a-z]*(?:[A-Z]|-)){', STR(?step1142), '}'), '')))), '[^-]', ''))) AS ?step2143) . BIND(((?step2143 + ?targetMotifMatchRegionMatchBeginPositionMF_02123131) - 1) AS ?thisPositionOn28) . BIND(?this AS ?pfs1t144) . BIND(URI(CONCAT(STR(?thisSequence), '#position', STR(?thisPositionOn27))) AS ?pfsb24) . BIND(URI(CONCAT(STR(?thisSequence), '#position', STR(?thisPositionOn28))) AS ?pfse25) . FILTER (REGEX('[VALGSEQ][VMA]', SUBSTR(?thisSequenceValue, ?thisPositionOn27, (?thisPositionOn28 - ?thisPositionOn27)))) . BIND(URI(CONCAT(STR(?this), '#MF_02123a23')) AS ?annotation23) . BIND(?this AS ?pfs22) . } OPTIONAL { ?this up:sequence ?thisSequence . ?thisSequence rdf:value ?thisSequenceValue . ?templateMotifMatch149 faldo:location ?templateMotifSequenceMatchRegionP9WNE1150 ; edam:is_output_of ?templateMotifSequenceProfileAlignmentOperationP9WNE1152 ; rdf:type edam:data_0869 ; rdf:value ?templateMotifCigarP9WNE1MF_02123145 . ?templateMotifSequenceMatchRegionP9WNE1150 faldo:begin ?templateMotifSequenceMatchBeginP9WNE1151 . ?templateMotifSequenceMatchBeginP9WNE1151 faldo:position ?templateMotifSequenceMatchBeginPositionP9WNE1146 ; faldo:reference isoform:P9WNE1-1 . ?templateMotifSequenceProfileAlignmentOperationP9WNE1152 edam:has_input signature:MF_02123 ; rdf:type edam:operation_0300 . ?targetMotifMatch153 faldo:location ?targetMotifMatchRegionMatch154 ; edam:is_output_of ?targetMotifSequenceAlignmentOperationMF_02123156 ; rdf:type edam:data_0869 ; rdf:value ?targetMotifMatchCigarP9WNE1MF_02123147 . ?targetMotifMatchRegionMatch154 faldo:begin ?targetMotifMatchRegionMatchBeginMF_02123155 . ?targetMotifMatchRegionMatchBeginMF_02123155 faldo:position ?targetMotifMatchRegionMatchBeginPositionMF_02123148 ; faldo:reference ?thisSequence . ?targetMotifSequenceAlignmentOperationMF_02123156 edam:has_input signature:MF_02123 ; rdf:type edam:operation_0300 . BIND(STRLEN(REPLACE(SUBSTR(?templateMotifCigarP9WNE1MF_02123145, 1, (STRLEN(?templateMotifCigarP9WNE1MF_02123145) - STRLEN(REPLACE(?templateMotifCigarP9WNE1MF_02123145, CONCAT('^(?:-*[^-]){', STR(((40 - ?templateMotifSequenceMatchBeginPositionP9WNE1146) + 1)), '}'), '')))), '[a-z]', '')) AS ?step1157) . BIND((STRLEN(SUBSTR(?targetMotifMatchCigarP9WNE1MF_02123147, 1, (STRLEN(?targetMotifMatchCigarP9WNE1MF_02123147) - STRLEN(REPLACE(?targetMotifMatchCigarP9WNE1MF_02123147, CONCAT('^(?:[a-z]*(?:[A-Z]|-)){', STR(?step1157), '}'), ''))))) - STRLEN(REPLACE(SUBSTR(?targetMotifMatchCigarP9WNE1MF_02123147, 1, (STRLEN(?targetMotifMatchCigarP9WNE1MF_02123147) - STRLEN(REPLACE(?targetMotifMatchCigarP9WNE1MF_02123147, CONCAT('^(?:[a-z]*(?:[A-Z]|-)){', STR(?step1157), '}'), '')))), '[^-]', ''))) AS ?step2158) . BIND(((?step2158 + ?targetMotifMatchRegionMatchBeginPositionMF_02123148) - 1) AS ?thisPositionOn33) . BIND(?thisPositionOn33 AS ?thisPositionOn34) . BIND(?this AS ?pfs1t159) . BIND(URI(CONCAT(STR(?thisSequence), '#position', STR(?thisPositionOn33))) AS ?pfsb31) . BIND(URI(CONCAT(STR(?thisSequence), '#position', STR(?thisPositionOn34))) AS ?pfse32) . FILTER ((SUBSTR(?thisSequenceValue, ?thisPositionOn33, 1) = 'H')) . BIND(URI(CONCAT(STR(?this), '#MF_02123a30')) AS ?annotation30) . BIND(?this AS ?pfs29) . } OPTIONAL { ?this up:sequence ?thisSequence . ?thisSequence rdf:value ?thisSequenceValue . ?templateMotifMatch164 faldo:location ?templateMotifSequenceMatchRegionP9WNE1165 ; edam:is_output_of ?templateMotifSequenceProfileAlignmentOperationP9WNE1167 ; rdf:type edam:data_0869 ; rdf:value ?templateMotifCigarP9WNE1MF_02123160 . ?templateMotifSequenceMatchRegionP9WNE1165 faldo:begin ?templateMotifSequenceMatchBeginP9WNE1166 . ?templateMotifSequenceMatchBeginP9WNE1166 faldo:position ?templateMotifSequenceMatchBeginPositionP9WNE1161 ; faldo:reference isoform:P9WNE1-1 . ?templateMotifSequenceProfileAlignmentOperationP9WNE1167 edam:has_input signature:MF_02123 ; rdf:type edam:operation_0300 . ?targetMotifMatch168 faldo:location ?targetMotifMatchRegionMatch169 ; edam:is_output_of ?targetMotifSequenceAlignmentOperationMF_02123171 ; rdf:type edam:data_0869 ; rdf:value ?targetMotifMatchCigarP9WNE1MF_02123162 . ?targetMotifMatchRegionMatch169 faldo:begin ?targetMotifMatchRegionMatchBeginMF_02123170 . ?targetMotifMatchRegionMatchBeginMF_02123170 faldo:position ?targetMotifMatchRegionMatchBeginPositionMF_02123163 ; faldo:reference ?thisSequence . ?targetMotifSequenceAlignmentOperationMF_02123171 edam:has_input signature:MF_02123 ; rdf:type edam:operation_0300 . BIND(STRLEN(REPLACE(SUBSTR(?templateMotifCigarP9WNE1MF_02123160, 1, (STRLEN(?templateMotifCigarP9WNE1MF_02123160) - STRLEN(REPLACE(?templateMotifCigarP9WNE1MF_02123160, CONCAT('^(?:-*[^-]){', STR(((109 - ?templateMotifSequenceMatchBeginPositionP9WNE1161) + 1)), '}'), '')))), '[a-z]', '')) AS ?step1172) . BIND((STRLEN(SUBSTR(?targetMotifMatchCigarP9WNE1MF_02123162, 1, (STRLEN(?targetMotifMatchCigarP9WNE1MF_02123162) - STRLEN(REPLACE(?targetMotifMatchCigarP9WNE1MF_02123162, CONCAT('^(?:[a-z]*(?:[A-Z]|-)){', STR(?step1172), '}'), ''))))) - STRLEN(REPLACE(SUBSTR(?targetMotifMatchCigarP9WNE1MF_02123162, 1, (STRLEN(?targetMotifMatchCigarP9WNE1MF_02123162) - STRLEN(REPLACE(?targetMotifMatchCigarP9WNE1MF_02123162, CONCAT('^(?:[a-z]*(?:[A-Z]|-)){', STR(?step1172), '}'), '')))), '[^-]', ''))) AS ?step2173) . BIND(((?step2173 + ?targetMotifMatchRegionMatchBeginPositionMF_02123163) - 1) AS ?thisPositionOn39) . BIND(?thisPositionOn39 AS ?thisPositionOn40) . BIND(?this AS ?pfs1t174) . BIND(URI(CONCAT(STR(?thisSequence), '#position', STR(?thisPositionOn39))) AS ?pfsb37) . BIND(URI(CONCAT(STR(?thisSequence), '#position', STR(?thisPositionOn40))) AS ?pfse38) . FILTER ((SUBSTR(?thisSequenceValue, ?thisPositionOn39, 1) = 'E')) . BIND(URI(CONCAT(STR(?this), '#MF_02123a36')) AS ?annotation36) . BIND(?this AS ?pfs35) . } OPTIONAL { ?this up:sequence ?thisSequence . ?thisSequence rdf:value ?thisSequenceValue . ?templateMotifMatch179 faldo:location ?templateMotifSequenceMatchRegionP9WNE1180 ; edam:is_output_of ?templateMotifSequenceProfileAlignmentOperationP9WNE1182 ; rdf:type edam:data_0869 ; rdf:value ?templateMotifCigarP9WNE1MF_02123175 . ?templateMotifSequenceMatchRegionP9WNE1180 faldo:begin ?templateMotifSequenceMatchBeginP9WNE1181 . ?templateMotifSequenceMatchBeginP9WNE1181 faldo:position ?templateMotifSequenceMatchBeginPositionP9WNE1176 ; faldo:reference isoform:P9WNE1-1 . ?templateMotifSequenceProfileAlignmentOperationP9WNE1182 edam:has_input signature:MF_02123 ; rdf:type edam:operation_0300 . ?targetMotifMatch183 faldo:location ?targetMotifMatchRegionMatch184 ; edam:is_output_of ?targetMotifSequenceAlignmentOperationMF_02123186 ; rdf:type edam:data_0869 ; rdf:value ?targetMotifMatchCigarP9WNE1MF_02123177 . ?targetMotifMatchRegionMatch184 faldo:begin ?targetMotifMatchRegionMatchBeginMF_02123185 . ?targetMotifMatchRegionMatchBeginMF_02123185 faldo:position ?targetMotifMatchRegionMatchBeginPositionMF_02123178 ; faldo:reference ?thisSequence . ?targetMotifSequenceAlignmentOperationMF_02123186 edam:has_input signature:MF_02123 ; rdf:type edam:operation_0300 . BIND(STRLEN(REPLACE(SUBSTR(?templateMotifCigarP9WNE1MF_02123175, 1, (STRLEN(?templateMotifCigarP9WNE1MF_02123175) - STRLEN(REPLACE(?templateMotifCigarP9WNE1MF_02123175, CONCAT('^(?:-*[^-]){', STR(((39 - ?templateMotifSequenceMatchBeginPositionP9WNE1176) + 1)), '}'), '')))), '[a-z]', '')) AS ?step1187) . BIND((STRLEN(SUBSTR(?targetMotifMatchCigarP9WNE1MF_02123177, 1, (STRLEN(?targetMotifMatchCigarP9WNE1MF_02123177) - STRLEN(REPLACE(?targetMotifMatchCigarP9WNE1MF_02123177, CONCAT('^(?:[a-z]*(?:[A-Z]|-)){', STR(?step1187), '}'), ''))))) - STRLEN(REPLACE(SUBSTR(?targetMotifMatchCigarP9WNE1MF_02123177, 1, (STRLEN(?targetMotifMatchCigarP9WNE1MF_02123177) - STRLEN(REPLACE(?targetMotifMatchCigarP9WNE1MF_02123177, CONCAT('^(?:[a-z]*(?:[A-Z]|-)){', STR(?step1187), '}'), '')))), '[^-]', ''))) AS ?step2188) . BIND(((?step2188 + ?targetMotifMatchRegionMatchBeginPositionMF_02123178) - 1) AS ?thisPositionOn46) . BIND(?thisPositionOn46 AS ?thisPositionOn47) . BIND(?this AS ?pfs1t189) . BIND(URI(CONCAT(STR(?thisSequence), '#position', STR(?thisPositionOn46))) AS ?pfsb43) . BIND(URI(CONCAT(STR(?thisSequence), '#position', STR(?thisPositionOn47))) AS ?pfse44) . FILTER ((SUBSTR(?thisSequenceValue, ?thisPositionOn46, 1) = 'D')) . BIND(URI(CONCAT(STR(?this), '#MF_02123a42')) AS ?annotation42) . BIND(?this AS ?pfs41) . } OPTIONAL { ?this up:sequence ?thisSequence . ?thisSequence rdf:value ?thisSequenceValue . ?templateMotifMatch194 faldo:location ?templateMotifSequenceMatchRegionP9WNE1195 ; edam:is_output_of ?templateMotifSequenceProfileAlignmentOperationP9WNE1197 ; rdf:type edam:data_0869 ; rdf:value ?templateMotifCigarP9WNE1MF_02123190 . ?templateMotifSequenceMatchRegionP9WNE1195 faldo:begin ?templateMotifSequenceMatchBeginP9WNE1196 . ?templateMotifSequenceMatchBeginP9WNE1196 faldo:position ?templateMotifSequenceMatchBeginPositionP9WNE1191 ; faldo:reference isoform:P9WNE1-1 . ?templateMotifSequenceProfileAlignmentOperationP9WNE1197 edam:has_input signature:MF_02123 ; rdf:type edam:operation_0300 . ?targetMotifMatch198 faldo:location ?targetMotifMatchRegionMatch199 ; edam:is_output_of ?targetMotifSequenceAlignmentOperationMF_02123201 ; rdf:type edam:data_0869 ; rdf:value ?targetMotifMatchCigarP9WNE1MF_02123192 . ?targetMotifMatchRegionMatch199 faldo:begin ?targetMotifMatchRegionMatchBeginMF_02123200 . ?targetMotifMatchRegionMatchBeginMF_02123200 faldo:position ?targetMotifMatchRegionMatchBeginPositionMF_02123193 ; faldo:reference ?thisSequence . ?targetMotifSequenceAlignmentOperationMF_02123201 edam:has_input signature:MF_02123 ; rdf:type edam:operation_0300 . BIND(STRLEN(REPLACE(SUBSTR(?templateMotifCigarP9WNE1MF_02123190, 1, (STRLEN(?templateMotifCigarP9WNE1MF_02123190) - STRLEN(REPLACE(?templateMotifCigarP9WNE1MF_02123190, CONCAT('^(?:-*[^-]){', STR(((76 - ?templateMotifSequenceMatchBeginPositionP9WNE1191) + 1)), '}'), '')))), '[a-z]', '')) AS ?step1202) . BIND((STRLEN(SUBSTR(?targetMotifMatchCigarP9WNE1MF_02123192, 1, (STRLEN(?targetMotifMatchCigarP9WNE1MF_02123192) - STRLEN(REPLACE(?targetMotifMatchCigarP9WNE1MF_02123192, CONCAT('^(?:[a-z]*(?:[A-Z]|-)){', STR(?step1202), '}'), ''))))) - STRLEN(REPLACE(SUBSTR(?targetMotifMatchCigarP9WNE1MF_02123192, 1, (STRLEN(?targetMotifMatchCigarP9WNE1MF_02123192) - STRLEN(REPLACE(?targetMotifMatchCigarP9WNE1MF_02123192, CONCAT('^(?:[a-z]*(?:[A-Z]|-)){', STR(?step1202), '}'), '')))), '[^-]', ''))) AS ?step2203) . BIND(((?step2203 + ?targetMotifMatchRegionMatchBeginPositionMF_02123193) - 1) AS ?thisPositionOn53) . BIND(?thisPositionOn53 AS ?thisPositionOn54) . BIND(?this AS ?pfs1t204) . BIND(URI(CONCAT(STR(?thisSequence), '#position', STR(?thisPositionOn53))) AS ?pfsb50) . BIND(URI(CONCAT(STR(?thisSequence), '#position', STR(?thisPositionOn54))) AS ?pfse51) . FILTER ((SUBSTR(?thisSequenceValue, ?thisPositionOn53, 1) = 'T')) . BIND(URI(CONCAT(STR(?this), '#MF_02123a49')) AS ?annotation49) . BIND(?this AS ?pfs48) . } OPTIONAL { ?this up:sequence ?thisSequence . ?thisSequence rdf:value ?thisSequenceValue . ?templateMotifMatch209 faldo:location ?templateMotifSequenceMatchRegionP9WNE1210 ; edam:is_output_of ?templateMotifSequenceProfileAlignmentOperationP9WNE1212 ; rdf:type edam:data_0869 ; rdf:value ?templateMotifCigarP9WNE1MF_02123205 . ?templateMotifSequenceMatchRegionP9WNE1210 faldo:begin ?templateMotifSequenceMatchBeginP9WNE1211 . ?templateMotifSequenceMatchBeginP9WNE1211 faldo:position ?templateMotifSequenceMatchBeginPositionP9WNE1206 ; faldo:reference isoform:P9WNE1-1 . ?templateMotifSequenceProfileAlignmentOperationP9WNE1212 edam:has_input signature:MF_02123 ; rdf:type edam:operation_0300 . ?targetMotifMatch213 faldo:location ?targetMotifMatchRegionMatch214 ; edam:is_output_of ?targetMotifSequenceAlignmentOperationMF_02123216 ; rdf:type edam:data_0869 ; rdf:value ?targetMotifMatchCigarP9WNE1MF_02123207 . ?targetMotifMatchRegionMatch214 faldo:begin ?targetMotifMatchRegionMatchBeginMF_02123215 . ?targetMotifMatchRegionMatchBeginMF_02123215 faldo:position ?targetMotifMatchRegionMatchBeginPositionMF_02123208 ; faldo:reference ?thisSequence . ?targetMotifSequenceAlignmentOperationMF_02123216 edam:has_input signature:MF_02123 ; rdf:type edam:operation_0300 . BIND(STRLEN(REPLACE(SUBSTR(?templateMotifCigarP9WNE1MF_02123205, 1, (STRLEN(?templateMotifCigarP9WNE1MF_02123205) - STRLEN(REPLACE(?templateMotifCigarP9WNE1MF_02123205, CONCAT('^(?:-*[^-]){', STR(((112 - ?templateMotifSequenceMatchBeginPositionP9WNE1206) + 1)), '}'), '')))), '[a-z]', '')) AS ?step1217) . BIND((STRLEN(SUBSTR(?targetMotifMatchCigarP9WNE1MF_02123207, 1, (STRLEN(?targetMotifMatchCigarP9WNE1MF_02123207) - STRLEN(REPLACE(?targetMotifMatchCigarP9WNE1MF_02123207, CONCAT('^(?:[a-z]*(?:[A-Z]|-)){', STR(?step1217), '}'), ''))))) - STRLEN(REPLACE(SUBSTR(?targetMotifMatchCigarP9WNE1MF_02123207, 1, (STRLEN(?targetMotifMatchCigarP9WNE1MF_02123207) - STRLEN(REPLACE(?targetMotifMatchCigarP9WNE1MF_02123207, CONCAT('^(?:[a-z]*(?:[A-Z]|-)){', STR(?step1217), '}'), '')))), '[^-]', ''))) AS ?step2218) . BIND(((?step2218 + ?targetMotifMatchRegionMatchBeginPositionMF_02123208) - 1) AS ?thisPositionOn60) . BIND(?thisPositionOn60 AS ?thisPositionOn61) . BIND(?this AS ?pfs1t219) . BIND(URI(CONCAT(STR(?thisSequence), '#position', STR(?thisPositionOn60))) AS ?pfsb57) . BIND(URI(CONCAT(STR(?thisSequence), '#position', STR(?thisPositionOn61))) AS ?pfse58) . FILTER ((SUBSTR(?thisSequenceValue, ?thisPositionOn60, 1) = 'N')) . BIND(URI(CONCAT(STR(?this), '#MF_02123a56')) AS ?annotation56) . BIND(?this AS ?pfs55) . } OPTIONAL { ?this up:sequence ?thisSequence . ?thisSequence rdf:value ?thisSequenceValue . ?templateMotifMatch224 faldo:location ?templateMotifSequenceMatchRegionP9WNE1225 ; edam:is_output_of ?templateMotifSequenceProfileAlignmentOperationP9WNE1227 ; rdf:type edam:data_0869 ; rdf:value ?templateMotifCigarP9WNE1MF_02123220 . ?templateMotifSequenceMatchRegionP9WNE1225 faldo:begin ?templateMotifSequenceMatchBeginP9WNE1226 . ?templateMotifSequenceMatchBeginP9WNE1226 faldo:position ?templateMotifSequenceMatchBeginPositionP9WNE1221 ; faldo:reference isoform:P9WNE1-1 . ?templateMotifSequenceProfileAlignmentOperationP9WNE1227 edam:has_input signature:MF_02123 ; rdf:type edam:operation_0300 . ?targetMotifMatch228 faldo:location ?targetMotifMatchRegionMatch229 ; edam:is_output_of ?targetMotifSequenceAlignmentOperationMF_02123231 ; rdf:type edam:data_0869 ; rdf:value ?targetMotifMatchCigarP9WNE1MF_02123222 . ?targetMotifMatchRegionMatch229 faldo:begin ?targetMotifMatchRegionMatchBeginMF_02123230 . ?targetMotifMatchRegionMatchBeginMF_02123230 faldo:position ?targetMotifMatchRegionMatchBeginPositionMF_02123223 ; faldo:reference ?thisSequence . ?targetMotifSequenceAlignmentOperationMF_02123231 edam:has_input signature:MF_02123 ; rdf:type edam:operation_0300 . BIND(STRLEN(REPLACE(SUBSTR(?templateMotifCigarP9WNE1MF_02123220, 1, (STRLEN(?templateMotifCigarP9WNE1MF_02123220) - STRLEN(REPLACE(?templateMotifCigarP9WNE1MF_02123220, CONCAT('^(?:-*[^-]){', STR(((195 - ?templateMotifSequenceMatchBeginPositionP9WNE1221) + 1)), '}'), '')))), '[a-z]', '')) AS ?step1232) . BIND((STRLEN(SUBSTR(?targetMotifMatchCigarP9WNE1MF_02123222, 1, (STRLEN(?targetMotifMatchCigarP9WNE1MF_02123222) - STRLEN(REPLACE(?targetMotifMatchCigarP9WNE1MF_02123222, CONCAT('^(?:[a-z]*(?:[A-Z]|-)){', STR(?step1232), '}'), ''))))) - STRLEN(REPLACE(SUBSTR(?targetMotifMatchCigarP9WNE1MF_02123222, 1, (STRLEN(?targetMotifMatchCigarP9WNE1MF_02123222) - STRLEN(REPLACE(?targetMotifMatchCigarP9WNE1MF_02123222, CONCAT('^(?:[a-z]*(?:[A-Z]|-)){', STR(?step1232), '}'), '')))), '[^-]', ''))) AS ?step2233) . BIND(((?step2233 + ?targetMotifMatchRegionMatchBeginPositionMF_02123223) - 1) AS ?thisPositionOn68) . BIND(?thisPositionOn68 AS ?thisPositionOn69) . BIND(?this AS ?pfs1t234) . BIND(URI(CONCAT(STR(?thisSequence), '#position', STR(?thisPositionOn68))) AS ?pfsb64) . BIND(URI(CONCAT(STR(?thisSequence), '#position', STR(?thisPositionOn69))) AS ?pfse65) . FILTER ((SUBSTR(?thisSequenceValue, ?thisPositionOn68, 1) = 'T')) . BIND(URI(CONCAT(STR(?this), '#MF_02123a63')) AS ?annotation63) . BIND(?this AS ?pfs62) . } OPTIONAL { ?this up:sequence ?thisSequence . ?thisSequence rdf:value ?thisSequenceValue . ?templateMotifMatch239 faldo:location ?templateMotifSequenceMatchRegionP9WNE1240 ; edam:is_output_of ?templateMotifSequenceProfileAlignmentOperationP9WNE1242 ; rdf:type edam:data_0869 ; rdf:value ?templateMotifCigarP9WNE1MF_02123235 . ?templateMotifSequenceMatchRegionP9WNE1240 faldo:begin ?templateMotifSequenceMatchBeginP9WNE1241 . ?templateMotifSequenceMatchBeginP9WNE1241 faldo:position ?templateMotifSequenceMatchBeginPositionP9WNE1236 ; faldo:reference isoform:P9WNE1-1 . ?templateMotifSequenceProfileAlignmentOperationP9WNE1242 edam:has_input signature:MF_02123 ; rdf:type edam:operation_0300 . ?targetMotifMatch243 faldo:location ?targetMotifMatchRegionMatch244 ; edam:is_output_of ?targetMotifSequenceAlignmentOperationMF_02123246 ; rdf:type edam:data_0869 ; rdf:value ?targetMotifMatchCigarP9WNE1MF_02123237 . ?targetMotifMatchRegionMatch244 faldo:begin ?targetMotifMatchRegionMatchBeginMF_02123245 . ?targetMotifMatchRegionMatchBeginMF_02123245 faldo:position ?targetMotifMatchRegionMatchBeginPositionMF_02123238 ; faldo:reference ?thisSequence . ?targetMotifSequenceAlignmentOperationMF_02123246 edam:has_input signature:MF_02123 ; rdf:type edam:operation_0300 . BIND(STRLEN(REPLACE(SUBSTR(?templateMotifCigarP9WNE1MF_02123235, 1, (STRLEN(?templateMotifCigarP9WNE1MF_02123235) - STRLEN(REPLACE(?templateMotifCigarP9WNE1MF_02123235, CONCAT('^(?:-*[^-]){', STR(((198 - ?templateMotifSequenceMatchBeginPositionP9WNE1236) + 1)), '}'), '')))), '[a-z]', '')) AS ?step1247) . BIND((STRLEN(SUBSTR(?targetMotifMatchCigarP9WNE1MF_02123237, 1, (STRLEN(?targetMotifMatchCigarP9WNE1MF_02123237) - STRLEN(REPLACE(?targetMotifMatchCigarP9WNE1MF_02123237, CONCAT('^(?:[a-z]*(?:[A-Z]|-)){', STR(?step1247), '}'), ''))))) - STRLEN(REPLACE(SUBSTR(?targetMotifMatchCigarP9WNE1MF_02123237, 1, (STRLEN(?targetMotifMatchCigarP9WNE1MF_02123237) - STRLEN(REPLACE(?targetMotifMatchCigarP9WNE1MF_02123237, CONCAT('^(?:[a-z]*(?:[A-Z]|-)){', STR(?step1247), '}'), '')))), '[^-]', ''))) AS ?step2248) . BIND(((?step2248 + ?targetMotifMatchRegionMatchBeginPositionMF_02123238) - 1) AS ?thisPositionOn76) . BIND(?thisPositionOn76 AS ?thisPositionOn77) . BIND(?this AS ?pfs1t249) . BIND(URI(CONCAT(STR(?thisSequence), '#position', STR(?thisPositionOn76))) AS ?pfsb72) . BIND(URI(CONCAT(STR(?thisSequence), '#position', STR(?thisPositionOn77))) AS ?pfse73) . FILTER ((SUBSTR(?thisSequenceValue, ?thisPositionOn76, 1) = 'K')) . BIND(URI(CONCAT(STR(?this), '#MF_02123a71')) AS ?annotation71) . BIND(?this AS ?pfs70) . } OPTIONAL { ?this up:sequence ?thisSequence . ?thisSequence rdf:value ?thisSequenceValue . ?templateMotifMatch254 faldo:location ?templateMotifSequenceMatchRegionP9WNE1255 ; edam:is_output_of ?templateMotifSequenceProfileAlignmentOperationP9WNE1257 ; rdf:type edam:data_0869 ; rdf:value ?templateMotifCigarP9WNE1MF_02123250 . ?templateMotifSequenceMatchRegionP9WNE1255 faldo:begin ?templateMotifSequenceMatchBeginP9WNE1256 . ?templateMotifSequenceMatchBeginP9WNE1256 faldo:position ?templateMotifSequenceMatchBeginPositionP9WNE1251 ; faldo:reference isoform:P9WNE1-1 . ?templateMotifSequenceProfileAlignmentOperationP9WNE1257 edam:has_input signature:MF_02123 ; rdf:type edam:operation_0300 . ?targetMotifMatch258 faldo:location ?targetMotifMatchRegionMatch259 ; edam:is_output_of ?targetMotifSequenceAlignmentOperationMF_02123261 ; rdf:type edam:data_0869 ; rdf:value ?targetMotifMatchCigarP9WNE1MF_02123252 . ?targetMotifMatchRegionMatch259 faldo:begin ?targetMotifMatchRegionMatchBeginMF_02123260 . ?targetMotifMatchRegionMatchBeginMF_02123260 faldo:position ?targetMotifMatchRegionMatchBeginPositionMF_02123253 ; faldo:reference ?thisSequence . ?targetMotifSequenceAlignmentOperationMF_02123261 edam:has_input signature:MF_02123 ; rdf:type edam:operation_0300 . BIND(STRLEN(REPLACE(SUBSTR(?templateMotifCigarP9WNE1MF_02123250, 1, (STRLEN(?templateMotifCigarP9WNE1MF_02123250) - STRLEN(REPLACE(?templateMotifCigarP9WNE1MF_02123250, CONCAT('^(?:-*[^-]){', STR(((259 - ?templateMotifSequenceMatchBeginPositionP9WNE1251) + 1)), '}'), '')))), '[a-z]', '')) AS ?step1262) . BIND((STRLEN(SUBSTR(?targetMotifMatchCigarP9WNE1MF_02123252, 1, (STRLEN(?targetMotifMatchCigarP9WNE1MF_02123252) - STRLEN(REPLACE(?targetMotifMatchCigarP9WNE1MF_02123252, CONCAT('^(?:[a-z]*(?:[A-Z]|-)){', STR(?step1262), '}'), ''))))) - STRLEN(REPLACE(SUBSTR(?targetMotifMatchCigarP9WNE1MF_02123252, 1, (STRLEN(?targetMotifMatchCigarP9WNE1MF_02123252) - STRLEN(REPLACE(?targetMotifMatchCigarP9WNE1MF_02123252, CONCAT('^(?:[a-z]*(?:[A-Z]|-)){', STR(?step1262), '}'), '')))), '[^-]', ''))) AS ?step2263) . BIND(((?step2263 + ?targetMotifMatchRegionMatchBeginPositionMF_02123253) - 1) AS ?thisPositionOn84) . BIND(?thisPositionOn84 AS ?thisPositionOn85) . BIND(?this AS ?pfs1t264) . BIND(URI(CONCAT(STR(?thisSequence), '#position', STR(?thisPositionOn84))) AS ?pfsb80) . BIND(URI(CONCAT(STR(?thisSequence), '#position', STR(?thisPositionOn85))) AS ?pfse81) . FILTER ((SUBSTR(?thisSequenceValue, ?thisPositionOn84, 1) = 'K')) . BIND(URI(CONCAT(STR(?this), '#MF_02123a79')) AS ?annotation79) . BIND(?this AS ?pfs78) . } OPTIONAL { ?this up:sequence ?thisSequence . ?thisSequence rdf:value ?thisSequenceValue . ?templateMotifMatch269 faldo:location ?templateMotifSequenceMatchRegionP9WNE1270 ; edam:is_output_of ?templateMotifSequenceProfileAlignmentOperationP9WNE1272 ; rdf:type edam:data_0869 ; rdf:value ?templateMotifCigarP9WNE1MF_02123265 . ?templateMotifSequenceMatchRegionP9WNE1270 faldo:begin ?templateMotifSequenceMatchBeginP9WNE1271 . ?templateMotifSequenceMatchBeginP9WNE1271 faldo:position ?templateMotifSequenceMatchBeginPositionP9WNE1266 ; faldo:reference isoform:P9WNE1-1 . ?templateMotifSequenceProfileAlignmentOperationP9WNE1272 edam:has_input signature:MF_02123 ; rdf:type edam:operation_0300 . ?targetMotifMatch273 faldo:location ?targetMotifMatchRegionMatch274 ; edam:is_output_of ?targetMotifSequenceAlignmentOperationMF_02123276 ; rdf:type edam:data_0869 ; rdf:value ?targetMotifMatchCigarP9WNE1MF_02123267 . ?targetMotifMatchRegionMatch274 faldo:begin ?targetMotifMatchRegionMatchBeginMF_02123275 . ?targetMotifMatchRegionMatchBeginMF_02123275 faldo:position ?targetMotifMatchRegionMatchBeginPositionMF_02123268 ; faldo:reference ?thisSequence . ?targetMotifSequenceAlignmentOperationMF_02123276 edam:has_input signature:MF_02123 ; rdf:type edam:operation_0300 . BIND(STRLEN(REPLACE(SUBSTR(?templateMotifCigarP9WNE1MF_02123265, 1, (STRLEN(?templateMotifCigarP9WNE1MF_02123265) - STRLEN(REPLACE(?templateMotifCigarP9WNE1MF_02123265, CONCAT('^(?:-*[^-]){', STR(((283 - ?templateMotifSequenceMatchBeginPositionP9WNE1266) + 1)), '}'), '')))), '[a-z]', '')) AS ?step1277) . BIND((STRLEN(SUBSTR(?targetMotifMatchCigarP9WNE1MF_02123267, 1, (STRLEN(?targetMotifMatchCigarP9WNE1MF_02123267) - STRLEN(REPLACE(?targetMotifMatchCigarP9WNE1MF_02123267, CONCAT('^(?:[a-z]*(?:[A-Z]|-)){', STR(?step1277), '}'), ''))))) - STRLEN(REPLACE(SUBSTR(?targetMotifMatchCigarP9WNE1MF_02123267, 1, (STRLEN(?targetMotifMatchCigarP9WNE1MF_02123267) - STRLEN(REPLACE(?targetMotifMatchCigarP9WNE1MF_02123267, CONCAT('^(?:[a-z]*(?:[A-Z]|-)){', STR(?step1277), '}'), '')))), '[^-]', ''))) AS ?step2278) . BIND(((?step2278 + ?targetMotifMatchRegionMatchBeginPositionMF_02123268) - 1) AS ?thisPositionOn92) . BIND(?thisPositionOn92 AS ?thisPositionOn93) . BIND(?this AS ?pfs1t279) . BIND(URI(CONCAT(STR(?thisSequence), '#position', STR(?thisPositionOn92))) AS ?pfsb88) . BIND(URI(CONCAT(STR(?thisSequence), '#position', STR(?thisPositionOn93))) AS ?pfse89) . FILTER ((SUBSTR(?thisSequenceValue, ?thisPositionOn92, 1) = 'R')) . BIND(URI(CONCAT(STR(?this), '#MF_02123a87')) AS ?annotation87) . BIND(?this AS ?pfs86) . } OPTIONAL { ?this a up:Protein . ?this up:organism ?thisOrganism . ?thisOrganism rdfs:subClassOf+ taxon:1763 . BIND(?this AS ?case6) . } OPTIONAL { ?this a up:Protein . ?this up:organism ?thisOrganism . FILTER (! (EXISTS { ?thisOrganism rdfs:subClassOf+ taxon:1763 . })) . BIND(?this AS ?case7) . } }