CONSTRUCT { _:775232 up:source unirule:MF_02241 . _:775233 up:source unirule:MF_02241 . _:775234 up:source unirule:MF_02241 . _:775235 up:source unirule:MF_02241 . _:775236 up:source unirule:MF_02241 . _:775237 up:source unirule:MF_02241 . _:775238 up:source unirule:MF_02241 . _:775239 up:source unirule:MF_02241 . _:775240 up:source unirule:MF_02241 . _:775241 up:source unirule:MF_02241 . _:775242 up:source unirule:MF_02241 . _:775243 up:source unirule:MF_02241 . _:775244 up:source unirule:MF_02241 . _:775245 up:source unirule:MF_02241 . _:775246 up:source unirule:MF_02241 . _:775247 up:source unirule:MF_02241 . _:775248 up:source unirule:MF_02241 . _:775249 up:source unirule:MF_02241 . _:775250 up:source unirule:MF_02241 . _:775251 up:source unirule:MF_02241 . _:775252 up:source unirule:MF_02241 . _:775253 up:source unirule:MF_02241 . _:775254 up:source unirule:MF_02241 . _:775255 up:source unirule:MF_02241 . _:775256 up:source unirule:MF_02241 . _:775257 up:source unirule:MF_02241 . _:775258 up:source unirule:MF_02241 . _:775259 up:source unirule:MF_02241 . _:775260 up:source unirule:MF_02241 . _:775261 up:source unirule:MF_02241 . _:775262 up:source unirule:MF_02241 . _:775263 up:source unirule:MF_02241 . _:775264 up:source unirule:MF_02241 . _:775265 up:source unirule:MF_02241 . _:775266 up:source unirule:MF_02241 . _:775267 up:source unirule:MF_02241 . _:775268 up:source unirule:MF_02241 . _:775269 up:source unirule:MF_02241 . ?this up:alternativeName ?name1 ; up:annotation ?annotation2 , ?annotation3 , ?annotation5 , ?annotation7 , ?annotation8 , ?annotation9 , ?annotation10 , ?annotation12 ; up:classifiedWith GO:0000287 , GO:0005886 , GO:0008654 , GO:0016780 , keyword:1003 , keyword:1133 , keyword:1208 , keyword:444 , keyword:460 , keyword:472 , keyword:479 , keyword:594 , keyword:808 , keyword:812 ; up:recommendedName ?name0 . ?name0 up:ecName '2.7.8.-' ; up:fullName 'Phosphatidylinositol phosphate synthase' ; up:shortName 'PIP synthase' ; rdf:type up:Structured_Name . ?name1 up:fullName 'CDP-diacylglycerol--D-myo-inositol-3-phosphate 3-phosphatidyltransferase' ; rdf:type up:Structured_Name . ?annotation2 a up:Function_Annotation ; rdfs:comment "Catalyzes the conjugation of the 1'-hydroxyl group of D-myo-inositol-3-phosphate (also named L-myo-inositol-1-phosphate) with a lipid tail of cytidine diphosphate diacylglycerol (CDP-DAG), forming phosphatidylinositol phosphate (PIP) and CMP. PIP is a precursor of phosphatidylinositol (PI) which is an essential lipid required for cell wall formation." . ?annotation3 up:activity ?activity4 ; rdf:type up:Catalytic_Activity_Annotation . ?activity4 up:catalyticActivity <http://rdf.rhea-db.org/60504>. ?annotation5 up:activity ?activity6 ; rdf:type up:Catalytic_Activity_Annotation . ?activity6 up:catalyticActivity <http://rdf.rhea-db.org/61216>. ?annotation7 up:cofactor chebi:18420 ; rdf:type up:Cofactor_Annotation ; rdfs:comment 'Contains a di-nuclear catalytic Mg(2+) center.' . ?annotation8 a up:Pathway_Annotation ; rdfs:comment 'Phospholipid metabolism; phosphatidylinositol phosphate biosynthesis.' . ?annotation9 a up:Subunit_Annotation ; rdfs:comment 'Homodimer.' . ?annotation10 a up:Subcellular_Location_Annotation . ?annotation10li11 up:cellularComponent <http://purl.uniprot.org/locations/null>. ?annotation12 a up:Similarity_Annotation ; rdfs:comment 'Belongs to the CDP-alcohol phosphatidyltransferase class-I family.' . ?pfs13 up:annotation ?annotation14 . ?annotation14 faldo:begin ?pfsb15 ; faldo:end ?pfse16 ; up:ligand ?ligand17 ; rdf:type up:Binding_Site_Annotation . ?pfsb15 faldo:position ?thisPositionOn18 ; rdf:type faldo:ExactPosition . ?pfse16 faldo:position ?thisPositionOn19 ; rdf:type faldo:ExactPosition . ?ligand17 rdfs:subClassOf chebi:58332 . ?pfs20 up:annotation ?annotation21 . ?annotation21 faldo:begin ?pfsb22 ; faldo:end ?pfse23 ; rdf:type up:Active_Site_Annotation ; rdfs:comment 'Proton acceptor' . ?pfsb22 faldo:position ?thisPositionOn24 ; rdf:type faldo:ExactPosition . ?pfse23 faldo:position ?thisPositionOn25 ; rdf:type faldo:ExactPosition . ?pfs26 up:annotation ?annotation27 . ?annotation27 faldo:begin ?pfsb28 ; faldo:end ?pfse29 ; up:ligand ?ligand30 ; rdf:type up:Binding_Site_Annotation . ?pfsb28 faldo:position ?thisPositionOn31 ; rdf:type faldo:ExactPosition . ?pfse29 faldo:position ?thisPositionOn32 ; rdf:type faldo:ExactPosition . ?ligand30 rdfs:subClassOf chebi:18420 . ?pfs33 up:annotation ?annotation34 . ?annotation34 faldo:begin ?pfsb35 ; faldo:end ?pfse36 ; up:ligand ?ligand37 ; rdf:type up:Binding_Site_Annotation . ?pfsb35 faldo:position ?thisPositionOn38 ; rdf:type faldo:ExactPosition . ?pfse36 faldo:position ?thisPositionOn39 ; rdf:type faldo:ExactPosition . ?ligand37 rdfs:subClassOf chebi:18420 . ?pfs40 up:annotation ?annotation41 . ?annotation41 faldo:begin ?pfsb42 ; faldo:end ?pfse43 ; up:ligand ?ligand44 ; rdf:type up:Binding_Site_Annotation . ?pfsb42 faldo:position ?thisPositionOn45 ; rdf:type faldo:ExactPosition . ?pfse43 faldo:position ?thisPositionOn46 ; rdf:type faldo:ExactPosition . ?ligand44 rdfs:subClassOf chebi:18420 . ?pfs47 up:annotation ?annotation48 . ?annotation48 faldo:begin ?pfsb49 ; faldo:end ?pfse50 ; up:ligand ?ligand51 ; rdf:type up:Binding_Site_Annotation . ?pfsb49 faldo:position ?thisPositionOn52 ; rdf:type faldo:ExactPosition . ?pfse50 faldo:position ?thisPositionOn53 ; rdf:type faldo:ExactPosition . ?ligand51 rdfs:subClassOf chebi:18420 . ?pfs54 up:annotation ?annotation55 . ?annotation55 faldo:begin ?pfsb56 ; faldo:end ?pfse57 ; up:ligand ?ligand58 ; rdf:type up:Binding_Site_Annotation . ?pfsb56 faldo:position ?thisPositionOn59 ; rdf:type faldo:ExactPosition . ?pfse57 faldo:position ?thisPositionOn60 ; rdf:type faldo:ExactPosition . ?ligand58 rdfs:subClassOf chebi:18420 . ?pfs61 up:annotation ?annotation62 . ?annotation62 faldo:begin ?pfsb63 ; faldo:end ?pfse64 ; up:ligand ?ligand65 ; rdf:type up:Binding_Site_Annotation . ?pfsb63 faldo:position ?thisPositionOn66 ; rdf:type faldo:ExactPosition . ?pfse64 faldo:position ?thisPositionOn67 ; rdf:type faldo:ExactPosition . ?ligand65 rdfs:subClassOf chebi:18420 . ?pfs68 up:annotation ?annotation69 . ?annotation69 faldo:begin ?pfsb70 ; faldo:end ?pfse71 ; up:ligand ?ligand72 ; rdf:type up:Binding_Site_Annotation . ?pfsb70 faldo:position ?thisPositionOn73 ; rdf:type faldo:ExactPosition . ?pfse71 faldo:position ?thisPositionOn74 ; rdf:type faldo:ExactPosition . ?ligand72 rdfs:subClassOf chebi:58332 . ?pfs75 up:annotation ?annotation76 . ?annotation76 faldo:begin ?pfsb77 ; faldo:end ?pfse78 ; up:ligand ?ligand79 ; rdf:type up:Binding_Site_Annotation . ?pfsb77 faldo:position ?thisPositionOn80 ; rdf:type faldo:ExactPosition . ?pfse78 faldo:position ?thisPositionOn81 ; rdf:type faldo:ExactPosition . ?ligand79 rdfs:subClassOf chebi:58332 . ?pfs82 up:annotation ?annotation83 . ?annotation83 faldo:begin ?pfsb84 ; faldo:end ?pfse85 ; up:ligand ?ligand86 ; rdf:type up:Binding_Site_Annotation . ?pfsb84 faldo:position ?thisPositionOn87 ; rdf:type faldo:ExactPosition . ?pfse85 faldo:position ?thisPositionOn88 ; rdf:type faldo:ExactPosition . ?ligand86 rdfs:subClassOf chebi:58332 . ?sam89 up:classifiedWith keyword:1133 , keyword:472 , keyword:812 . ?transmembrane90 faldo:begin ?transmembraneb91 ; faldo:end ?transmembranee92 . ?transmembraneb91 faldo:position ?transmembranebp93 . ?transmembranee92 faldo:position ?transmembraneep94 . ?keyword95 up:range ?transmembrane90 . ?keyword96 up:range ?transmembrane90 . ?keyword97 up:range ?transmembrane90 . _:775270 a rdf:Statement ; up:attribution _:775232 ; rdf:subject ?this ; rdf:predicate up:recommendedName ; rdf:object ?name0 . _:775271 a rdf:Statement ; up:attribution _:775233 ; rdf:subject ?this ; rdf:predicate up:alternativeName ; rdf:object ?name1 . _:775272 a rdf:Statement ; up:attribution _:775234 ; rdf:subject ?this ; rdf:predicate up:annotation ; rdf:object ?annotation2 . _:775273 a rdf:Statement ; up:attribution _:775235 ; rdf:subject ?this ; rdf:predicate up:annotation ; rdf:object ?annotation3 . _:775274 a rdf:Statement ; up:attribution _:775236 ; rdf:subject ?this ; rdf:predicate up:annotation ; rdf:object ?annotation5 . _:775275 a rdf:Statement ; up:attribution _:775237 ; rdf:subject ?this ; rdf:predicate up:annotation ; rdf:object ?annotation7 . _:775276 a rdf:Statement ; up:attribution _:775238 ; rdf:subject ?this ; rdf:predicate up:annotation ; rdf:object ?annotation8 . _:775277 a rdf:Statement ; up:attribution _:775239 ; rdf:subject ?this ; rdf:predicate up:annotation ; rdf:object ?annotation9 . _:775278 a rdf:Statement ; up:attribution _:775240 ; rdf:subject ?this ; rdf:predicate up:annotation ; rdf:object ?annotation10 . _:775279 a rdf:Statement ; up:attribution _:775241 ; rdf:subject ?this ; rdf:predicate up:annotation ; rdf:object ?annotation12 . _:775280 a rdf:Statement ; up:attribution _:775242 ; rdf:subject ?this ; rdf:predicate up:classifiedWith ; rdf:object keyword:1003 . _:775281 a rdf:Statement ; up:attribution _:775243 ; rdf:subject ?this ; rdf:predicate up:classifiedWith ; rdf:object keyword:444 . _:775282 a rdf:Statement ; up:attribution _:775244 ; rdf:subject ?this ; rdf:predicate up:classifiedWith ; rdf:object keyword:460 . _:775283 a rdf:Statement ; up:attribution _:775245 ; rdf:subject ?this ; rdf:predicate up:classifiedWith ; rdf:object keyword:472 . _:775284 a rdf:Statement ; up:attribution _:775246 ; rdf:subject ?this ; rdf:predicate up:classifiedWith ; rdf:object keyword:479 . _:775285 a rdf:Statement ; up:attribution _:775247 ; rdf:subject ?this ; rdf:predicate up:classifiedWith ; rdf:object keyword:594 . _:775286 a rdf:Statement ; up:attribution _:775248 ; rdf:subject ?this ; rdf:predicate up:classifiedWith ; rdf:object keyword:1208 . _:775287 a rdf:Statement ; up:attribution _:775249 ; rdf:subject ?this ; rdf:predicate up:classifiedWith ; rdf:object keyword:808 . _:775288 a rdf:Statement ; up:attribution _:775250 ; rdf:subject ?this ; rdf:predicate up:classifiedWith ; rdf:object keyword:812 . _:775289 a rdf:Statement ; up:attribution _:775251 ; rdf:subject ?this ; rdf:predicate up:classifiedWith ; rdf:object keyword:1133 . _:775290 a rdf:Statement ; up:attribution _:775252 ; rdf:subject ?this ; rdf:predicate up:classifiedWith ; rdf:object GO:0000287 . _:775291 a rdf:Statement ; up:attribution _:775253 ; rdf:subject ?this ; rdf:predicate up:classifiedWith ; rdf:object GO:0016780 . _:775292 a rdf:Statement ; up:attribution _:775254 ; rdf:subject ?this ; rdf:predicate up:classifiedWith ; rdf:object GO:0008654 . _:775293 a rdf:Statement ; up:attribution _:775255 ; rdf:subject ?this ; rdf:predicate up:classifiedWith ; rdf:object GO:0005886 . _:775294 a rdf:Statement ; up:source unirule:MF_02241 ; rdf:subject ?pfs13 ; rdf:predicate up:annotation ; rdf:object ?annotation14 . _:775295 a rdf:Statement ; up:attribution _:775256 ; rdf:subject ?pfs13 ; rdf:predicate up:annotation ; rdf:object ?annotation14 . _:775296 a rdf:Statement ; up:source unirule:MF_02241 ; rdf:subject ?pfs20 ; rdf:predicate up:annotation ; rdf:object ?annotation21 . _:775297 a rdf:Statement ; up:attribution _:775257 ; rdf:subject ?pfs20 ; rdf:predicate up:annotation ; rdf:object ?annotation21 . _:775298 a rdf:Statement ; up:source unirule:MF_02241 ; rdf:subject ?pfs26 ; rdf:predicate up:annotation ; rdf:object ?annotation27 . _:775299 a rdf:Statement ; up:attribution _:775258 ; rdf:subject ?pfs26 ; rdf:predicate up:annotation ; rdf:object ?annotation27 . _:775300 a rdf:Statement ; up:source unirule:MF_02241 ; rdf:subject ?pfs33 ; rdf:predicate up:annotation ; rdf:object ?annotation34 . _:775301 a rdf:Statement ; up:attribution _:775259 ; rdf:subject ?pfs33 ; rdf:predicate up:annotation ; rdf:object ?annotation34 . _:775302 a rdf:Statement ; up:source unirule:MF_02241 ; rdf:subject ?pfs40 ; rdf:predicate up:annotation ; rdf:object ?annotation41 . _:775303 a rdf:Statement ; up:attribution _:775260 ; rdf:subject ?pfs40 ; rdf:predicate up:annotation ; rdf:object ?annotation41 . _:775304 a rdf:Statement ; up:source unirule:MF_02241 ; rdf:subject ?pfs47 ; rdf:predicate up:annotation ; rdf:object ?annotation48 . _:775305 a rdf:Statement ; up:attribution _:775261 ; rdf:subject ?pfs47 ; rdf:predicate up:annotation ; rdf:object ?annotation48 . _:775306 a rdf:Statement ; up:source unirule:MF_02241 ; rdf:subject ?pfs54 ; rdf:predicate up:annotation ; rdf:object ?annotation55 . _:775307 a rdf:Statement ; up:attribution _:775262 ; rdf:subject ?pfs54 ; rdf:predicate up:annotation ; rdf:object ?annotation55 . _:775308 a rdf:Statement ; up:source unirule:MF_02241 ; rdf:subject ?pfs61 ; rdf:predicate up:annotation ; rdf:object ?annotation62 . _:775309 a rdf:Statement ; up:attribution _:775263 ; rdf:subject ?pfs61 ; rdf:predicate up:annotation ; rdf:object ?annotation62 . _:775310 a rdf:Statement ; up:source unirule:MF_02241 ; rdf:subject ?pfs68 ; rdf:predicate up:annotation ; rdf:object ?annotation69 . _:775311 a rdf:Statement ; up:attribution _:775264 ; rdf:subject ?pfs68 ; rdf:predicate up:annotation ; rdf:object ?annotation69 . _:775312 a rdf:Statement ; up:source unirule:MF_02241 ; rdf:subject ?pfs75 ; rdf:predicate up:annotation ; rdf:object ?annotation76 . _:775313 a rdf:Statement ; up:attribution _:775265 ; rdf:subject ?pfs75 ; rdf:predicate up:annotation ; rdf:object ?annotation76 . _:775314 a rdf:Statement ; up:source unirule:MF_02241 ; rdf:subject ?pfs82 ; rdf:predicate up:annotation ; rdf:object ?annotation83 . _:775315 a rdf:Statement ; up:attribution _:775266 ; rdf:subject ?pfs82 ; rdf:predicate up:annotation ; rdf:object ?annotation83 . _:775316 a rdf:Statement ; up:attribution _:775267 ; rdf:subject ?sam89 ; rdf:predicate up:classifiedWith ; rdf:object keyword:472 . _:775317 a rdf:Statement ; up:attribution _:775268 ; rdf:subject ?sam89 ; rdf:predicate up:classifiedWith ; rdf:object keyword:812 . _:775318 a rdf:Statement ; up:attribution _:775269 ; rdf:subject ?sam89 ; rdf:predicate up:classifiedWith ; rdf:object keyword:1133 . } WHERE { #baseURI: http://purl.uniprot.org/unirule/MF_02241 #Rule MF_02241 Created by:? on:2019-12-19 Modified by:Edouard de Castro on:2024-09-02 ?this up:organism ?thisOrganism ; rdfs:seeAlso signature:MF_02241 . ?thisOrganism rdfs:subClassOf+ taxon:2 . BIND(URI(CONCAT(STR(?this), '#MF_02241a0')) AS ?name0) . BIND(URI(CONCAT(STR(?this), '#MF_02241a1')) AS ?name1) . BIND(URI(CONCAT(STR(?this), '#MF_02241a2')) AS ?annotation2) . BIND(URI(CONCAT(STR(?this), '#MF_02241a3')) AS ?annotation3) . BIND(URI(CONCAT(STR(?this), '#MF_02241a5')) AS ?annotation5) . BIND(URI(CONCAT(STR(?this), '#MF_02241a7')) AS ?annotation7) . BIND(URI(CONCAT(STR(?this), '#MF_02241a8')) AS ?annotation8) . BIND(URI(CONCAT(STR(?this), '#MF_02241a9')) AS ?annotation9) . BIND(URI(CONCAT(STR(?this), '#MF_02241a10')) AS ?annotation10) . BIND(URI(CONCAT(STR(?this), '#MF_02241a12')) AS ?annotation12) . OPTIONAL { ?this up:sequence ?thisSequence . ?thisSequence rdf:value ?thisSequenceValue . ?templateMotifMatch102 faldo:location ?templateMotifSequenceMatchRegionP9WPG7103 ; edam:is_output_of ?templateMotifSequenceProfileAlignmentOperationP9WPG7105 ; rdf:type edam:data_0869 ; rdf:value ?templateMotifCigarP9WPG7MF_0224198 . ?templateMotifSequenceMatchRegionP9WPG7103 faldo:begin ?templateMotifSequenceMatchBeginP9WPG7104 . ?templateMotifSequenceMatchBeginP9WPG7104 faldo:position ?templateMotifSequenceMatchBeginPositionP9WPG799 ; faldo:reference isoform:P9WPG7-1 . ?templateMotifSequenceProfileAlignmentOperationP9WPG7105 edam:has_input signature:MF_02241 ; rdf:type edam:operation_0300 . ?targetMotifMatch106 faldo:location ?targetMotifMatchRegionMatch107 ; edam:is_output_of ?targetMotifSequenceAlignmentOperationMF_02241109 ; rdf:type edam:data_0869 ; rdf:value ?targetMotifMatchCigarP9WPG7MF_02241100 . ?targetMotifMatchRegionMatch107 faldo:begin ?targetMotifMatchRegionMatchBeginMF_02241108 . ?targetMotifMatchRegionMatchBeginMF_02241108 faldo:position ?targetMotifMatchRegionMatchBeginPositionMF_02241101 ; faldo:reference ?thisSequence . ?targetMotifSequenceAlignmentOperationMF_02241109 edam:has_input signature:MF_02241 ; rdf:type edam:operation_0300 . BIND(STRLEN(REPLACE(SUBSTR(?templateMotifCigarP9WPG7MF_0224198, 1, (STRLEN(?templateMotifCigarP9WPG7MF_0224198) - STRLEN(REPLACE(?templateMotifCigarP9WPG7MF_0224198, CONCAT('^(?:-*[^-]){', STR(((31 - ?templateMotifSequenceMatchBeginPositionP9WPG799) + 1)), '}'), '')))), '[a-z]', '')) AS ?step1110) . BIND((STRLEN(SUBSTR(?targetMotifMatchCigarP9WPG7MF_02241100, 1, (STRLEN(?targetMotifMatchCigarP9WPG7MF_02241100) - STRLEN(REPLACE(?targetMotifMatchCigarP9WPG7MF_02241100, CONCAT('^(?:[a-z]*(?:[A-Z]|-)){', STR(?step1110), '}'), ''))))) - STRLEN(REPLACE(SUBSTR(?targetMotifMatchCigarP9WPG7MF_02241100, 1, (STRLEN(?targetMotifMatchCigarP9WPG7MF_02241100) - STRLEN(REPLACE(?targetMotifMatchCigarP9WPG7MF_02241100, CONCAT('^(?:[a-z]*(?:[A-Z]|-)){', STR(?step1110), '}'), '')))), '[^-]', ''))) AS ?step2111) . BIND(((?step2111 + ?targetMotifMatchRegionMatchBeginPositionMF_02241101) - 1) AS ?thisPositionOn18) . BIND(STRLEN(REPLACE(SUBSTR(?templateMotifCigarP9WPG7MF_0224198, 1, (STRLEN(?templateMotifCigarP9WPG7MF_0224198) - STRLEN(REPLACE(?templateMotifCigarP9WPG7MF_0224198, CONCAT('^(?:-*[^-]){', STR(((34 - ?templateMotifSequenceMatchBeginPositionP9WPG799) + 1)), '}'), '')))), '[a-z]', '')) AS ?step1112) . BIND((STRLEN(SUBSTR(?targetMotifMatchCigarP9WPG7MF_02241100, 1, (STRLEN(?targetMotifMatchCigarP9WPG7MF_02241100) - STRLEN(REPLACE(?targetMotifMatchCigarP9WPG7MF_02241100, CONCAT('^(?:[a-z]*(?:[A-Z]|-)){', STR(?step1112), '}'), ''))))) - STRLEN(REPLACE(SUBSTR(?targetMotifMatchCigarP9WPG7MF_02241100, 1, (STRLEN(?targetMotifMatchCigarP9WPG7MF_02241100) - STRLEN(REPLACE(?targetMotifMatchCigarP9WPG7MF_02241100, CONCAT('^(?:[a-z]*(?:[A-Z]|-)){', STR(?step1112), '}'), '')))), '[^-]', ''))) AS ?step2113) . BIND(((?step2113 + ?targetMotifMatchRegionMatchBeginPositionMF_02241101) - 1) AS ?thisPositionOn19) . BIND(?this AS ?pfs1t114) . BIND(URI(CONCAT(STR(?thisSequence), '#position', STR(?thisPositionOn18))) AS ?pfsb15) . BIND(URI(CONCAT(STR(?thisSequence), '#position', STR(?thisPositionOn19))) AS ?pfse16) . FILTER (REGEX('[DN][ARNDCQEGHILKMFPSTWYVBZJUOX][VLIM]T', SUBSTR(?thisSequenceValue, ?thisPositionOn18, (?thisPositionOn19 - ?thisPositionOn18)))) . BIND(URI(CONCAT(STR(?this), '#MF_02241a14')) AS ?annotation14) . BIND(?this AS ?pfs13) . } OPTIONAL { ?this up:sequence ?thisSequence . ?thisSequence rdf:value ?thisSequenceValue . ?templateMotifMatch119 faldo:location ?templateMotifSequenceMatchRegionP9WPG7120 ; edam:is_output_of ?templateMotifSequenceProfileAlignmentOperationP9WPG7122 ; rdf:type edam:data_0869 ; rdf:value ?templateMotifCigarP9WPG7MF_02241115 . ?templateMotifSequenceMatchRegionP9WPG7120 faldo:begin ?templateMotifSequenceMatchBeginP9WPG7121 . ?templateMotifSequenceMatchBeginP9WPG7121 faldo:position ?templateMotifSequenceMatchBeginPositionP9WPG7116 ; faldo:reference isoform:P9WPG7-1 . ?templateMotifSequenceProfileAlignmentOperationP9WPG7122 edam:has_input signature:MF_02241 ; rdf:type edam:operation_0300 . ?targetMotifMatch123 faldo:location ?targetMotifMatchRegionMatch124 ; edam:is_output_of ?targetMotifSequenceAlignmentOperationMF_02241126 ; rdf:type edam:data_0869 ; rdf:value ?targetMotifMatchCigarP9WPG7MF_02241117 . ?targetMotifMatchRegionMatch124 faldo:begin ?targetMotifMatchRegionMatchBeginMF_02241125 . ?targetMotifMatchRegionMatchBeginMF_02241125 faldo:position ?targetMotifMatchRegionMatchBeginPositionMF_02241118 ; faldo:reference ?thisSequence . ?targetMotifSequenceAlignmentOperationMF_02241126 edam:has_input signature:MF_02241 ; rdf:type edam:operation_0300 . BIND(STRLEN(REPLACE(SUBSTR(?templateMotifCigarP9WPG7MF_02241115, 1, (STRLEN(?templateMotifCigarP9WPG7MF_02241115) - STRLEN(REPLACE(?templateMotifCigarP9WPG7MF_02241115, CONCAT('^(?:-*[^-]){', STR(((93 - ?templateMotifSequenceMatchBeginPositionP9WPG7116) + 1)), '}'), '')))), '[a-z]', '')) AS ?step1127) . BIND((STRLEN(SUBSTR(?targetMotifMatchCigarP9WPG7MF_02241117, 1, (STRLEN(?targetMotifMatchCigarP9WPG7MF_02241117) - STRLEN(REPLACE(?targetMotifMatchCigarP9WPG7MF_02241117, CONCAT('^(?:[a-z]*(?:[A-Z]|-)){', STR(?step1127), '}'), ''))))) - STRLEN(REPLACE(SUBSTR(?targetMotifMatchCigarP9WPG7MF_02241117, 1, (STRLEN(?targetMotifMatchCigarP9WPG7MF_02241117) - STRLEN(REPLACE(?targetMotifMatchCigarP9WPG7MF_02241117, CONCAT('^(?:[a-z]*(?:[A-Z]|-)){', STR(?step1127), '}'), '')))), '[^-]', ''))) AS ?step2128) . BIND(((?step2128 + ?targetMotifMatchRegionMatchBeginPositionMF_02241118) - 1) AS ?thisPositionOn24) . BIND(?thisPositionOn24 AS ?thisPositionOn25) . BIND(?this AS ?pfs1t129) . BIND(URI(CONCAT(STR(?thisSequence), '#position', STR(?thisPositionOn24))) AS ?pfsb22) . BIND(URI(CONCAT(STR(?thisSequence), '#position', STR(?thisPositionOn25))) AS ?pfse23) . FILTER ((SUBSTR(?thisSequenceValue, ?thisPositionOn24, 1) = 'D')) . BIND(URI(CONCAT(STR(?this), '#MF_02241a21')) AS ?annotation21) . BIND(?this AS ?pfs20) . } OPTIONAL { ?this up:sequence ?thisSequence . ?thisSequence rdf:value ?thisSequenceValue . ?templateMotifMatch134 faldo:location ?templateMotifSequenceMatchRegionP9WPG7135 ; edam:is_output_of ?templateMotifSequenceProfileAlignmentOperationP9WPG7137 ; rdf:type edam:data_0869 ; rdf:value ?templateMotifCigarP9WPG7MF_02241130 . ?templateMotifSequenceMatchRegionP9WPG7135 faldo:begin ?templateMotifSequenceMatchBeginP9WPG7136 . ?templateMotifSequenceMatchBeginP9WPG7136 faldo:position ?templateMotifSequenceMatchBeginPositionP9WPG7131 ; faldo:reference isoform:P9WPG7-1 . ?templateMotifSequenceProfileAlignmentOperationP9WPG7137 edam:has_input signature:MF_02241 ; rdf:type edam:operation_0300 . ?targetMotifMatch138 faldo:location ?targetMotifMatchRegionMatch139 ; edam:is_output_of ?targetMotifSequenceAlignmentOperationMF_02241141 ; rdf:type edam:data_0869 ; rdf:value ?targetMotifMatchCigarP9WPG7MF_02241132 . ?targetMotifMatchRegionMatch139 faldo:begin ?targetMotifMatchRegionMatchBeginMF_02241140 . ?targetMotifMatchRegionMatchBeginMF_02241140 faldo:position ?targetMotifMatchRegionMatchBeginPositionMF_02241133 ; faldo:reference ?thisSequence . ?targetMotifSequenceAlignmentOperationMF_02241141 edam:has_input signature:MF_02241 ; rdf:type edam:operation_0300 . BIND(STRLEN(REPLACE(SUBSTR(?templateMotifCigarP9WPG7MF_02241130, 1, (STRLEN(?templateMotifCigarP9WPG7MF_02241130) - STRLEN(REPLACE(?templateMotifCigarP9WPG7MF_02241130, CONCAT('^(?:-*[^-]){', STR(((68 - ?templateMotifSequenceMatchBeginPositionP9WPG7131) + 1)), '}'), '')))), '[a-z]', '')) AS ?step1142) . BIND((STRLEN(SUBSTR(?targetMotifMatchCigarP9WPG7MF_02241132, 1, (STRLEN(?targetMotifMatchCigarP9WPG7MF_02241132) - STRLEN(REPLACE(?targetMotifMatchCigarP9WPG7MF_02241132, CONCAT('^(?:[a-z]*(?:[A-Z]|-)){', STR(?step1142), '}'), ''))))) - STRLEN(REPLACE(SUBSTR(?targetMotifMatchCigarP9WPG7MF_02241132, 1, (STRLEN(?targetMotifMatchCigarP9WPG7MF_02241132) - STRLEN(REPLACE(?targetMotifMatchCigarP9WPG7MF_02241132, CONCAT('^(?:[a-z]*(?:[A-Z]|-)){', STR(?step1142), '}'), '')))), '[^-]', ''))) AS ?step2143) . BIND(((?step2143 + ?targetMotifMatchRegionMatchBeginPositionMF_02241133) - 1) AS ?thisPositionOn31) . BIND(?thisPositionOn31 AS ?thisPositionOn32) . BIND(?this AS ?pfs1t144) . BIND(URI(CONCAT(STR(?thisSequence), '#position', STR(?thisPositionOn31))) AS ?pfsb28) . BIND(URI(CONCAT(STR(?thisSequence), '#position', STR(?thisPositionOn32))) AS ?pfse29) . FILTER ((SUBSTR(?thisSequenceValue, ?thisPositionOn31, 1) = 'D')) . BIND(URI(CONCAT(STR(?this), '#MF_02241a27')) AS ?annotation27) . BIND(?this AS ?pfs26) . } OPTIONAL { ?this up:sequence ?thisSequence . ?thisSequence rdf:value ?thisSequenceValue . ?templateMotifMatch149 faldo:location ?templateMotifSequenceMatchRegionP9WPG7150 ; edam:is_output_of ?templateMotifSequenceProfileAlignmentOperationP9WPG7152 ; rdf:type edam:data_0869 ; rdf:value ?templateMotifCigarP9WPG7MF_02241145 . ?templateMotifSequenceMatchRegionP9WPG7150 faldo:begin ?templateMotifSequenceMatchBeginP9WPG7151 . ?templateMotifSequenceMatchBeginP9WPG7151 faldo:position ?templateMotifSequenceMatchBeginPositionP9WPG7146 ; faldo:reference isoform:P9WPG7-1 . ?templateMotifSequenceProfileAlignmentOperationP9WPG7152 edam:has_input signature:MF_02241 ; rdf:type edam:operation_0300 . ?targetMotifMatch153 faldo:location ?targetMotifMatchRegionMatch154 ; edam:is_output_of ?targetMotifSequenceAlignmentOperationMF_02241156 ; rdf:type edam:data_0869 ; rdf:value ?targetMotifMatchCigarP9WPG7MF_02241147 . ?targetMotifMatchRegionMatch154 faldo:begin ?targetMotifMatchRegionMatchBeginMF_02241155 . ?targetMotifMatchRegionMatchBeginMF_02241155 faldo:position ?targetMotifMatchRegionMatchBeginPositionMF_02241148 ; faldo:reference ?thisSequence . ?targetMotifSequenceAlignmentOperationMF_02241156 edam:has_input signature:MF_02241 ; rdf:type edam:operation_0300 . BIND(STRLEN(REPLACE(SUBSTR(?templateMotifCigarP9WPG7MF_02241145, 1, (STRLEN(?templateMotifCigarP9WPG7MF_02241145) - STRLEN(REPLACE(?templateMotifCigarP9WPG7MF_02241145, CONCAT('^(?:-*[^-]){', STR(((68 - ?templateMotifSequenceMatchBeginPositionP9WPG7146) + 1)), '}'), '')))), '[a-z]', '')) AS ?step1157) . BIND((STRLEN(SUBSTR(?targetMotifMatchCigarP9WPG7MF_02241147, 1, (STRLEN(?targetMotifMatchCigarP9WPG7MF_02241147) - STRLEN(REPLACE(?targetMotifMatchCigarP9WPG7MF_02241147, CONCAT('^(?:[a-z]*(?:[A-Z]|-)){', STR(?step1157), '}'), ''))))) - STRLEN(REPLACE(SUBSTR(?targetMotifMatchCigarP9WPG7MF_02241147, 1, (STRLEN(?targetMotifMatchCigarP9WPG7MF_02241147) - STRLEN(REPLACE(?targetMotifMatchCigarP9WPG7MF_02241147, CONCAT('^(?:[a-z]*(?:[A-Z]|-)){', STR(?step1157), '}'), '')))), '[^-]', ''))) AS ?step2158) . BIND(((?step2158 + ?targetMotifMatchRegionMatchBeginPositionMF_02241148) - 1) AS ?thisPositionOn38) . BIND(?thisPositionOn38 AS ?thisPositionOn39) . BIND(?this AS ?pfs1t159) . BIND(URI(CONCAT(STR(?thisSequence), '#position', STR(?thisPositionOn38))) AS ?pfsb35) . BIND(URI(CONCAT(STR(?thisSequence), '#position', STR(?thisPositionOn39))) AS ?pfse36) . FILTER ((SUBSTR(?thisSequenceValue, ?thisPositionOn38, 1) = 'D')) . BIND(URI(CONCAT(STR(?this), '#MF_02241a34')) AS ?annotation34) . BIND(?this AS ?pfs33) . } OPTIONAL { ?this up:sequence ?thisSequence . ?thisSequence rdf:value ?thisSequenceValue . ?templateMotifMatch164 faldo:location ?templateMotifSequenceMatchRegionP9WPG7165 ; edam:is_output_of ?templateMotifSequenceProfileAlignmentOperationP9WPG7167 ; rdf:type edam:data_0869 ; rdf:value ?templateMotifCigarP9WPG7MF_02241160 . ?templateMotifSequenceMatchRegionP9WPG7165 faldo:begin ?templateMotifSequenceMatchBeginP9WPG7166 . ?templateMotifSequenceMatchBeginP9WPG7166 faldo:position ?templateMotifSequenceMatchBeginPositionP9WPG7161 ; faldo:reference isoform:P9WPG7-1 . ?templateMotifSequenceProfileAlignmentOperationP9WPG7167 edam:has_input signature:MF_02241 ; rdf:type edam:operation_0300 . ?targetMotifMatch168 faldo:location ?targetMotifMatchRegionMatch169 ; edam:is_output_of ?targetMotifSequenceAlignmentOperationMF_02241171 ; rdf:type edam:data_0869 ; rdf:value ?targetMotifMatchCigarP9WPG7MF_02241162 . ?targetMotifMatchRegionMatch169 faldo:begin ?targetMotifMatchRegionMatchBeginMF_02241170 . ?targetMotifMatchRegionMatchBeginMF_02241170 faldo:position ?targetMotifMatchRegionMatchBeginPositionMF_02241163 ; faldo:reference ?thisSequence . ?targetMotifSequenceAlignmentOperationMF_02241171 edam:has_input signature:MF_02241 ; rdf:type edam:operation_0300 . BIND(STRLEN(REPLACE(SUBSTR(?templateMotifCigarP9WPG7MF_02241160, 1, (STRLEN(?templateMotifCigarP9WPG7MF_02241160) - STRLEN(REPLACE(?templateMotifCigarP9WPG7MF_02241160, CONCAT('^(?:-*[^-]){', STR(((71 - ?templateMotifSequenceMatchBeginPositionP9WPG7161) + 1)), '}'), '')))), '[a-z]', '')) AS ?step1172) . BIND((STRLEN(SUBSTR(?targetMotifMatchCigarP9WPG7MF_02241162, 1, (STRLEN(?targetMotifMatchCigarP9WPG7MF_02241162) - STRLEN(REPLACE(?targetMotifMatchCigarP9WPG7MF_02241162, CONCAT('^(?:[a-z]*(?:[A-Z]|-)){', STR(?step1172), '}'), ''))))) - STRLEN(REPLACE(SUBSTR(?targetMotifMatchCigarP9WPG7MF_02241162, 1, (STRLEN(?targetMotifMatchCigarP9WPG7MF_02241162) - STRLEN(REPLACE(?targetMotifMatchCigarP9WPG7MF_02241162, CONCAT('^(?:[a-z]*(?:[A-Z]|-)){', STR(?step1172), '}'), '')))), '[^-]', ''))) AS ?step2173) . BIND(((?step2173 + ?targetMotifMatchRegionMatchBeginPositionMF_02241163) - 1) AS ?thisPositionOn45) . BIND(?thisPositionOn45 AS ?thisPositionOn46) . BIND(?this AS ?pfs1t174) . BIND(URI(CONCAT(STR(?thisSequence), '#position', STR(?thisPositionOn45))) AS ?pfsb42) . BIND(URI(CONCAT(STR(?thisSequence), '#position', STR(?thisPositionOn46))) AS ?pfse43) . FILTER ((SUBSTR(?thisSequenceValue, ?thisPositionOn45, 1) = 'D')) . BIND(URI(CONCAT(STR(?this), '#MF_02241a41')) AS ?annotation41) . BIND(?this AS ?pfs40) . } OPTIONAL { ?this up:sequence ?thisSequence . ?thisSequence rdf:value ?thisSequenceValue . ?templateMotifMatch179 faldo:location ?templateMotifSequenceMatchRegionP9WPG7180 ; edam:is_output_of ?templateMotifSequenceProfileAlignmentOperationP9WPG7182 ; rdf:type edam:data_0869 ; rdf:value ?templateMotifCigarP9WPG7MF_02241175 . ?templateMotifSequenceMatchRegionP9WPG7180 faldo:begin ?templateMotifSequenceMatchBeginP9WPG7181 . ?templateMotifSequenceMatchBeginP9WPG7181 faldo:position ?templateMotifSequenceMatchBeginPositionP9WPG7176 ; faldo:reference isoform:P9WPG7-1 . ?templateMotifSequenceProfileAlignmentOperationP9WPG7182 edam:has_input signature:MF_02241 ; rdf:type edam:operation_0300 . ?targetMotifMatch183 faldo:location ?targetMotifMatchRegionMatch184 ; edam:is_output_of ?targetMotifSequenceAlignmentOperationMF_02241186 ; rdf:type edam:data_0869 ; rdf:value ?targetMotifMatchCigarP9WPG7MF_02241177 . ?targetMotifMatchRegionMatch184 faldo:begin ?targetMotifMatchRegionMatchBeginMF_02241185 . ?targetMotifMatchRegionMatchBeginMF_02241185 faldo:position ?targetMotifMatchRegionMatchBeginPositionMF_02241178 ; faldo:reference ?thisSequence . ?targetMotifSequenceAlignmentOperationMF_02241186 edam:has_input signature:MF_02241 ; rdf:type edam:operation_0300 . BIND(STRLEN(REPLACE(SUBSTR(?templateMotifCigarP9WPG7MF_02241175, 1, (STRLEN(?templateMotifCigarP9WPG7MF_02241175) - STRLEN(REPLACE(?templateMotifCigarP9WPG7MF_02241175, CONCAT('^(?:-*[^-]){', STR(((89 - ?templateMotifSequenceMatchBeginPositionP9WPG7176) + 1)), '}'), '')))), '[a-z]', '')) AS ?step1187) . BIND((STRLEN(SUBSTR(?targetMotifMatchCigarP9WPG7MF_02241177, 1, (STRLEN(?targetMotifMatchCigarP9WPG7MF_02241177) - STRLEN(REPLACE(?targetMotifMatchCigarP9WPG7MF_02241177, CONCAT('^(?:[a-z]*(?:[A-Z]|-)){', STR(?step1187), '}'), ''))))) - STRLEN(REPLACE(SUBSTR(?targetMotifMatchCigarP9WPG7MF_02241177, 1, (STRLEN(?targetMotifMatchCigarP9WPG7MF_02241177) - STRLEN(REPLACE(?targetMotifMatchCigarP9WPG7MF_02241177, CONCAT('^(?:[a-z]*(?:[A-Z]|-)){', STR(?step1187), '}'), '')))), '[^-]', ''))) AS ?step2188) . BIND(((?step2188 + ?targetMotifMatchRegionMatchBeginPositionMF_02241178) - 1) AS ?thisPositionOn52) . BIND(?thisPositionOn52 AS ?thisPositionOn53) . BIND(?this AS ?pfs1t189) . BIND(URI(CONCAT(STR(?thisSequence), '#position', STR(?thisPositionOn52))) AS ?pfsb49) . BIND(URI(CONCAT(STR(?thisSequence), '#position', STR(?thisPositionOn53))) AS ?pfse50) . FILTER ((SUBSTR(?thisSequenceValue, ?thisPositionOn52, 1) = 'D')) . BIND(URI(CONCAT(STR(?this), '#MF_02241a48')) AS ?annotation48) . BIND(?this AS ?pfs47) . } OPTIONAL { ?this up:sequence ?thisSequence . ?thisSequence rdf:value ?thisSequenceValue . ?templateMotifMatch194 faldo:location ?templateMotifSequenceMatchRegionP9WPG7195 ; edam:is_output_of ?templateMotifSequenceProfileAlignmentOperationP9WPG7197 ; rdf:type edam:data_0869 ; rdf:value ?templateMotifCigarP9WPG7MF_02241190 . ?templateMotifSequenceMatchRegionP9WPG7195 faldo:begin ?templateMotifSequenceMatchBeginP9WPG7196 . ?templateMotifSequenceMatchBeginP9WPG7196 faldo:position ?templateMotifSequenceMatchBeginPositionP9WPG7191 ; faldo:reference isoform:P9WPG7-1 . ?templateMotifSequenceProfileAlignmentOperationP9WPG7197 edam:has_input signature:MF_02241 ; rdf:type edam:operation_0300 . ?targetMotifMatch198 faldo:location ?targetMotifMatchRegionMatch199 ; edam:is_output_of ?targetMotifSequenceAlignmentOperationMF_02241201 ; rdf:type edam:data_0869 ; rdf:value ?targetMotifMatchCigarP9WPG7MF_02241192 . ?targetMotifMatchRegionMatch199 faldo:begin ?targetMotifMatchRegionMatchBeginMF_02241200 . ?targetMotifMatchRegionMatchBeginMF_02241200 faldo:position ?targetMotifMatchRegionMatchBeginPositionMF_02241193 ; faldo:reference ?thisSequence . ?targetMotifSequenceAlignmentOperationMF_02241201 edam:has_input signature:MF_02241 ; rdf:type edam:operation_0300 . BIND(STRLEN(REPLACE(SUBSTR(?templateMotifCigarP9WPG7MF_02241190, 1, (STRLEN(?templateMotifCigarP9WPG7MF_02241190) - STRLEN(REPLACE(?templateMotifCigarP9WPG7MF_02241190, CONCAT('^(?:-*[^-]){', STR(((89 - ?templateMotifSequenceMatchBeginPositionP9WPG7191) + 1)), '}'), '')))), '[a-z]', '')) AS ?step1202) . BIND((STRLEN(SUBSTR(?targetMotifMatchCigarP9WPG7MF_02241192, 1, (STRLEN(?targetMotifMatchCigarP9WPG7MF_02241192) - STRLEN(REPLACE(?targetMotifMatchCigarP9WPG7MF_02241192, CONCAT('^(?:[a-z]*(?:[A-Z]|-)){', STR(?step1202), '}'), ''))))) - STRLEN(REPLACE(SUBSTR(?targetMotifMatchCigarP9WPG7MF_02241192, 1, (STRLEN(?targetMotifMatchCigarP9WPG7MF_02241192) - STRLEN(REPLACE(?targetMotifMatchCigarP9WPG7MF_02241192, CONCAT('^(?:[a-z]*(?:[A-Z]|-)){', STR(?step1202), '}'), '')))), '[^-]', ''))) AS ?step2203) . BIND(((?step2203 + ?targetMotifMatchRegionMatchBeginPositionMF_02241193) - 1) AS ?thisPositionOn59) . BIND(?thisPositionOn59 AS ?thisPositionOn60) . BIND(?this AS ?pfs1t204) . BIND(URI(CONCAT(STR(?thisSequence), '#position', STR(?thisPositionOn59))) AS ?pfsb56) . BIND(URI(CONCAT(STR(?thisSequence), '#position', STR(?thisPositionOn60))) AS ?pfse57) . FILTER ((SUBSTR(?thisSequenceValue, ?thisPositionOn59, 1) = 'D')) . BIND(URI(CONCAT(STR(?this), '#MF_02241a55')) AS ?annotation55) . BIND(?this AS ?pfs54) . } OPTIONAL { ?this up:sequence ?thisSequence . ?thisSequence rdf:value ?thisSequenceValue . ?templateMotifMatch209 faldo:location ?templateMotifSequenceMatchRegionP9WPG7210 ; edam:is_output_of ?templateMotifSequenceProfileAlignmentOperationP9WPG7212 ; rdf:type edam:data_0869 ; rdf:value ?templateMotifCigarP9WPG7MF_02241205 . ?templateMotifSequenceMatchRegionP9WPG7210 faldo:begin ?templateMotifSequenceMatchBeginP9WPG7211 . ?templateMotifSequenceMatchBeginP9WPG7211 faldo:position ?templateMotifSequenceMatchBeginPositionP9WPG7206 ; faldo:reference isoform:P9WPG7-1 . ?templateMotifSequenceProfileAlignmentOperationP9WPG7212 edam:has_input signature:MF_02241 ; rdf:type edam:operation_0300 . ?targetMotifMatch213 faldo:location ?targetMotifMatchRegionMatch214 ; edam:is_output_of ?targetMotifSequenceAlignmentOperationMF_02241216 ; rdf:type edam:data_0869 ; rdf:value ?targetMotifMatchCigarP9WPG7MF_02241207 . ?targetMotifMatchRegionMatch214 faldo:begin ?targetMotifMatchRegionMatchBeginMF_02241215 . ?targetMotifMatchRegionMatchBeginMF_02241215 faldo:position ?targetMotifMatchRegionMatchBeginPositionMF_02241208 ; faldo:reference ?thisSequence . ?targetMotifSequenceAlignmentOperationMF_02241216 edam:has_input signature:MF_02241 ; rdf:type edam:operation_0300 . BIND(STRLEN(REPLACE(SUBSTR(?templateMotifCigarP9WPG7MF_02241205, 1, (STRLEN(?templateMotifCigarP9WPG7MF_02241205) - STRLEN(REPLACE(?templateMotifCigarP9WPG7MF_02241205, CONCAT('^(?:-*[^-]){', STR(((93 - ?templateMotifSequenceMatchBeginPositionP9WPG7206) + 1)), '}'), '')))), '[a-z]', '')) AS ?step1217) . BIND((STRLEN(SUBSTR(?targetMotifMatchCigarP9WPG7MF_02241207, 1, (STRLEN(?targetMotifMatchCigarP9WPG7MF_02241207) - STRLEN(REPLACE(?targetMotifMatchCigarP9WPG7MF_02241207, CONCAT('^(?:[a-z]*(?:[A-Z]|-)){', STR(?step1217), '}'), ''))))) - STRLEN(REPLACE(SUBSTR(?targetMotifMatchCigarP9WPG7MF_02241207, 1, (STRLEN(?targetMotifMatchCigarP9WPG7MF_02241207) - STRLEN(REPLACE(?targetMotifMatchCigarP9WPG7MF_02241207, CONCAT('^(?:[a-z]*(?:[A-Z]|-)){', STR(?step1217), '}'), '')))), '[^-]', ''))) AS ?step2218) . BIND(((?step2218 + ?targetMotifMatchRegionMatchBeginPositionMF_02241208) - 1) AS ?thisPositionOn66) . BIND(?thisPositionOn66 AS ?thisPositionOn67) . BIND(?this AS ?pfs1t219) . BIND(URI(CONCAT(STR(?thisSequence), '#position', STR(?thisPositionOn66))) AS ?pfsb63) . BIND(URI(CONCAT(STR(?thisSequence), '#position', STR(?thisPositionOn67))) AS ?pfse64) . FILTER ((SUBSTR(?thisSequenceValue, ?thisPositionOn66, 1) = 'D')) . BIND(URI(CONCAT(STR(?this), '#MF_02241a62')) AS ?annotation62) . BIND(?this AS ?pfs61) . } OPTIONAL { ?this up:sequence ?thisSequence . ?thisSequence rdf:value ?thisSequenceValue . ?templateMotifMatch224 faldo:location ?templateMotifSequenceMatchRegionP9WPG7225 ; edam:is_output_of ?templateMotifSequenceProfileAlignmentOperationP9WPG7227 ; rdf:type edam:data_0869 ; rdf:value ?templateMotifCigarP9WPG7MF_02241220 . ?templateMotifSequenceMatchRegionP9WPG7225 faldo:begin ?templateMotifSequenceMatchBeginP9WPG7226 . ?templateMotifSequenceMatchBeginP9WPG7226 faldo:position ?templateMotifSequenceMatchBeginPositionP9WPG7221 ; faldo:reference isoform:P9WPG7-1 . ?templateMotifSequenceProfileAlignmentOperationP9WPG7227 edam:has_input signature:MF_02241 ; rdf:type edam:operation_0300 . ?targetMotifMatch228 faldo:location ?targetMotifMatchRegionMatch229 ; edam:is_output_of ?targetMotifSequenceAlignmentOperationMF_02241231 ; rdf:type edam:data_0869 ; rdf:value ?targetMotifMatchCigarP9WPG7MF_02241222 . ?targetMotifMatchRegionMatch229 faldo:begin ?targetMotifMatchRegionMatchBeginMF_02241230 . ?targetMotifMatchRegionMatchBeginMF_02241230 faldo:position ?targetMotifMatchRegionMatchBeginPositionMF_02241223 ; faldo:reference ?thisSequence . ?targetMotifSequenceAlignmentOperationMF_02241231 edam:has_input signature:MF_02241 ; rdf:type edam:operation_0300 . BIND(STRLEN(REPLACE(SUBSTR(?templateMotifCigarP9WPG7MF_02241220, 1, (STRLEN(?templateMotifCigarP9WPG7MF_02241220) - STRLEN(REPLACE(?templateMotifCigarP9WPG7MF_02241220, CONCAT('^(?:-*[^-]){', STR(((72 - ?templateMotifSequenceMatchBeginPositionP9WPG7221) + 1)), '}'), '')))), '[a-z]', '')) AS ?step1232) . BIND((STRLEN(SUBSTR(?targetMotifMatchCigarP9WPG7MF_02241222, 1, (STRLEN(?targetMotifMatchCigarP9WPG7MF_02241222) - STRLEN(REPLACE(?targetMotifMatchCigarP9WPG7MF_02241222, CONCAT('^(?:[a-z]*(?:[A-Z]|-)){', STR(?step1232), '}'), ''))))) - STRLEN(REPLACE(SUBSTR(?targetMotifMatchCigarP9WPG7MF_02241222, 1, (STRLEN(?targetMotifMatchCigarP9WPG7MF_02241222) - STRLEN(REPLACE(?targetMotifMatchCigarP9WPG7MF_02241222, CONCAT('^(?:[a-z]*(?:[A-Z]|-)){', STR(?step1232), '}'), '')))), '[^-]', ''))) AS ?step2233) . BIND(((?step2233 + ?targetMotifMatchRegionMatchBeginPositionMF_02241223) - 1) AS ?thisPositionOn73) . BIND(?thisPositionOn73 AS ?thisPositionOn74) . BIND(?this AS ?pfs1t234) . BIND(URI(CONCAT(STR(?thisSequence), '#position', STR(?thisPositionOn73))) AS ?pfsb70) . BIND(URI(CONCAT(STR(?thisSequence), '#position', STR(?thisPositionOn74))) AS ?pfse71) . FILTER ((SUBSTR(?thisSequenceValue, ?thisPositionOn73, 1) = 'G')) . BIND(URI(CONCAT(STR(?this), '#MF_02241a69')) AS ?annotation69) . BIND(?this AS ?pfs68) . } OPTIONAL { ?this up:sequence ?thisSequence . ?thisSequence rdf:value ?thisSequenceValue . ?templateMotifMatch239 faldo:location ?templateMotifSequenceMatchRegionP9WPG7240 ; edam:is_output_of ?templateMotifSequenceProfileAlignmentOperationP9WPG7242 ; rdf:type edam:data_0869 ; rdf:value ?templateMotifCigarP9WPG7MF_02241235 . ?templateMotifSequenceMatchRegionP9WPG7240 faldo:begin ?templateMotifSequenceMatchBeginP9WPG7241 . ?templateMotifSequenceMatchBeginP9WPG7241 faldo:position ?templateMotifSequenceMatchBeginPositionP9WPG7236 ; faldo:reference isoform:P9WPG7-1 . ?templateMotifSequenceProfileAlignmentOperationP9WPG7242 edam:has_input signature:MF_02241 ; rdf:type edam:operation_0300 . ?targetMotifMatch243 faldo:location ?targetMotifMatchRegionMatch244 ; edam:is_output_of ?targetMotifSequenceAlignmentOperationMF_02241246 ; rdf:type edam:data_0869 ; rdf:value ?targetMotifMatchCigarP9WPG7MF_02241237 . ?targetMotifMatchRegionMatch244 faldo:begin ?targetMotifMatchRegionMatchBeginMF_02241245 . ?targetMotifMatchRegionMatchBeginMF_02241245 faldo:position ?targetMotifMatchRegionMatchBeginPositionMF_02241238 ; faldo:reference ?thisSequence . ?targetMotifSequenceAlignmentOperationMF_02241246 edam:has_input signature:MF_02241 ; rdf:type edam:operation_0300 . BIND(STRLEN(REPLACE(SUBSTR(?templateMotifCigarP9WPG7MF_02241235, 1, (STRLEN(?templateMotifCigarP9WPG7MF_02241235) - STRLEN(REPLACE(?templateMotifCigarP9WPG7MF_02241235, CONCAT('^(?:-*[^-]){', STR(((76 - ?templateMotifSequenceMatchBeginPositionP9WPG7236) + 1)), '}'), '')))), '[a-z]', '')) AS ?step1247) . BIND((STRLEN(SUBSTR(?targetMotifMatchCigarP9WPG7MF_02241237, 1, (STRLEN(?targetMotifMatchCigarP9WPG7MF_02241237) - STRLEN(REPLACE(?targetMotifMatchCigarP9WPG7MF_02241237, CONCAT('^(?:[a-z]*(?:[A-Z]|-)){', STR(?step1247), '}'), ''))))) - STRLEN(REPLACE(SUBSTR(?targetMotifMatchCigarP9WPG7MF_02241237, 1, (STRLEN(?targetMotifMatchCigarP9WPG7MF_02241237) - STRLEN(REPLACE(?targetMotifMatchCigarP9WPG7MF_02241237, CONCAT('^(?:[a-z]*(?:[A-Z]|-)){', STR(?step1247), '}'), '')))), '[^-]', ''))) AS ?step2248) . BIND(((?step2248 + ?targetMotifMatchRegionMatchBeginPositionMF_02241238) - 1) AS ?thisPositionOn80) . BIND(?thisPositionOn80 AS ?thisPositionOn81) . BIND(?this AS ?pfs1t249) . BIND(URI(CONCAT(STR(?thisSequence), '#position', STR(?thisPositionOn80))) AS ?pfsb77) . BIND(URI(CONCAT(STR(?thisSequence), '#position', STR(?thisPositionOn81))) AS ?pfse78) . FILTER ((SUBSTR(?thisSequenceValue, ?thisPositionOn80, 1) = 'R')) . BIND(URI(CONCAT(STR(?this), '#MF_02241a76')) AS ?annotation76) . BIND(?this AS ?pfs75) . } OPTIONAL { ?this up:sequence ?thisSequence . ?thisSequence rdf:value ?thisSequenceValue . ?templateMotifMatch254 faldo:location ?templateMotifSequenceMatchRegionP9WPG7255 ; edam:is_output_of ?templateMotifSequenceProfileAlignmentOperationP9WPG7257 ; rdf:type edam:data_0869 ; rdf:value ?templateMotifCigarP9WPG7MF_02241250 . ?templateMotifSequenceMatchRegionP9WPG7255 faldo:begin ?templateMotifSequenceMatchBeginP9WPG7256 . ?templateMotifSequenceMatchBeginP9WPG7256 faldo:position ?templateMotifSequenceMatchBeginPositionP9WPG7251 ; faldo:reference isoform:P9WPG7-1 . ?templateMotifSequenceProfileAlignmentOperationP9WPG7257 edam:has_input signature:MF_02241 ; rdf:type edam:operation_0300 . ?targetMotifMatch258 faldo:location ?targetMotifMatchRegionMatch259 ; edam:is_output_of ?targetMotifSequenceAlignmentOperationMF_02241261 ; rdf:type edam:data_0869 ; rdf:value ?targetMotifMatchCigarP9WPG7MF_02241252 . ?targetMotifMatchRegionMatch259 faldo:begin ?targetMotifMatchRegionMatchBeginMF_02241260 . ?targetMotifMatchRegionMatchBeginMF_02241260 faldo:position ?targetMotifMatchRegionMatchBeginPositionMF_02241253 ; faldo:reference ?thisSequence . ?targetMotifSequenceAlignmentOperationMF_02241261 edam:has_input signature:MF_02241 ; rdf:type edam:operation_0300 . BIND(STRLEN(REPLACE(SUBSTR(?templateMotifCigarP9WPG7MF_02241250, 1, (STRLEN(?templateMotifCigarP9WPG7MF_02241250) - STRLEN(REPLACE(?templateMotifCigarP9WPG7MF_02241250, CONCAT('^(?:-*[^-]){', STR(((82 - ?templateMotifSequenceMatchBeginPositionP9WPG7251) + 1)), '}'), '')))), '[a-z]', '')) AS ?step1262) . BIND((STRLEN(SUBSTR(?targetMotifMatchCigarP9WPG7MF_02241252, 1, (STRLEN(?targetMotifMatchCigarP9WPG7MF_02241252) - STRLEN(REPLACE(?targetMotifMatchCigarP9WPG7MF_02241252, CONCAT('^(?:[a-z]*(?:[A-Z]|-)){', STR(?step1262), '}'), ''))))) - STRLEN(REPLACE(SUBSTR(?targetMotifMatchCigarP9WPG7MF_02241252, 1, (STRLEN(?targetMotifMatchCigarP9WPG7MF_02241252) - STRLEN(REPLACE(?targetMotifMatchCigarP9WPG7MF_02241252, CONCAT('^(?:[a-z]*(?:[A-Z]|-)){', STR(?step1262), '}'), '')))), '[^-]', ''))) AS ?step2263) . BIND(((?step2263 + ?targetMotifMatchRegionMatchBeginPositionMF_02241253) - 1) AS ?thisPositionOn87) . BIND(?thisPositionOn87 AS ?thisPositionOn88) . BIND(?this AS ?pfs1t264) . BIND(URI(CONCAT(STR(?thisSequence), '#position', STR(?thisPositionOn87))) AS ?pfsb84) . BIND(URI(CONCAT(STR(?thisSequence), '#position', STR(?thisPositionOn88))) AS ?pfse85) . FILTER (REGEX('[TS]', SUBSTR(?thisSequenceValue, ?thisPositionOn87, 1))) . BIND(URI(CONCAT(STR(?this), '#MF_02241a83')) AS ?annotation83) . BIND(?this AS ?pfs82) . } OPTIONAL { ?this up:annotation ?samtransmembrane265 ; up:sequence ?thisSequence . ?samtransmembrane265 up:range ?samtransmembraner266 ; rdf:type up:Transmembrane_Annotation . ?samtransmembraner266 faldo:begin ?samtransmembraneb267 ; faldo:end ?samtransmembranee268 . ?samtransmembraneb267 faldo:position ?samtransmembranebp269 ; faldo:reference ?thisSequence . ?samtransmembranee268 faldo:position ?samtransmembraneep270 ; faldo:reference ?thisSequence . BIND(?this AS ?sam89) . } BIND(URI(CONCAT(STR(?this), '#MF_02241a95')) AS ?keyword95) . BIND(URI(CONCAT(STR(?this), '#MF_02241a96')) AS ?keyword96) . BIND(URI(CONCAT(STR(?this), '#MF_02241a97')) AS ?keyword97) . }