CONSTRUCT { _:814128 up:source unirule:MF_03118 . _:814129 up:ecName '4.2.1.109' ; up:fullName 'Methylthioribulose-1-phosphate dehydratase' ; up:shortName 'MTRu-1-P dehydratase' ; rdf:type up:Structured_Name . _:814130 up:source unirule:MF_03118 . _:814131 up:ecName '3.1.3.77' ; up:fullName 'Enolase-phosphatase E1' ; rdf:type up:Structured_Name . _:814132 up:fullName '2,3-diketo-5-methylthio-1-phosphopentane phosphatase' ; rdf:type up:Structured_Name . _:814133 up:source unirule:MF_03118 . _:814134 up:source unirule:MF_03118 . _:814135 up:source unirule:MF_03118 . _:814136 up:source unirule:MF_03118 . _:814137 up:source unirule:MF_03118 . _:814138 up:source unirule:MF_03118 . _:814139 up:source unirule:MF_03118 . _:814140 up:source unirule:MF_03118 . _:814141 up:source unirule:MF_03118 . _:814142 up:source unirule:MF_03118 . _:814143 up:source unirule:MF_03118 . _:814144 up:source unirule:MF_03118 . _:814145 up:source unirule:MF_03118 . _:814146 up:source unirule:MF_03118 . _:814147 up:source unirule:MF_03118 . _:814148 up:source unirule:MF_03118 . _:814149 up:source unirule:MF_03118 . _:814150 up:source unirule:MF_03118 . _:814151 up:source unirule:MF_03118 . _:814152 up:source unirule:MF_03118 . _:814153 up:source unirule:MF_03118 . _:814154 up:source unirule:MF_03118 . _:814155 up:source unirule:MF_03118 . _:814156 up:source unirule:MF_03118 . _:814157 up:source unirule:MF_03118 . _:814158 up:source unirule:MF_03118 . _:814159 up:source unirule:MF_03118 . _:814160 up:source unirule:MF_03118 . _:814161 up:source unirule:MF_03118 . _:814162 up:source unirule:MF_03118 . _:814163 up:source unirule:MF_03118 . _:814164 up:source unirule:MF_03118 . _:814165 up:source unirule:MF_03118 . _:814166 up:source unirule:MF_03118 . _:814167 up:source unirule:MF_03118 . ?this up:annotation ?annotation3 , ?annotation5 , ?annotation7 , ?annotation8 , ?annotation9 , ?annotation10 , ?annotation11 , ?annotation12 ; up:classifiedWith GO:0008270 , GO:0019284 , GO:0043715 , GO:0043716 , GO:0046570 , keyword:28 , keyword:378 , keyword:456 , keyword:479 , keyword:486 , keyword:511 , keyword:862 ; up:domain ?namedpart1 , ?namedpart2 ; up:recommendedName ?name0 . ?name0 up:fullName 'Probable bifunctional methylthioribulose-1-phosphate dehydratase/enolase-phosphatase E1' ; rdf:type up:Structured_Name . ?namedpart1 up:recommendedName _:814129 . ?namedpart2 up:alternativeName _:814132 ; up:recommendedName _:814131 . ?annotation3 up:activity ?activity4 ; rdf:type up:Catalytic_Activity_Annotation . ?activity4 up:catalyticActivity <http://rdf.rhea-db.org/15549>; up:enzymeClass <http://purl.uniprot.org/enzyme/4.2.1.109>. ?annotation5 up:activity ?activity6 ; rdf:type up:Catalytic_Activity_Annotation . ?activity6 up:catalyticActivity <http://rdf.rhea-db.org/21700>; up:enzymeClass <http://purl.uniprot.org/enzyme/3.1.3.77>. ?annotation7 up:cofactor chebi:29105 ; rdf:type up:Cofactor_Annotation ; rdfs:comment 'Binds 1 zinc ion per subunit.' . ?annotation8 a up:Pathway_Annotation ; rdfs:comment 'Amino-acid biosynthesis; L-methionine biosynthesis via salvage pathway; L-methionine from S-methyl-5-thio-alpha-D-ribose 1-phosphate: step 2/6.' . ?annotation9 a up:Pathway_Annotation ; rdfs:comment 'Amino-acid biosynthesis; L-methionine biosynthesis via salvage pathway; L-methionine from S-methyl-5-thio-alpha-D-ribose 1-phosphate: step 3/6.' . ?annotation10 a up:Pathway_Annotation ; rdfs:comment 'Amino-acid biosynthesis; L-methionine biosynthesis via salvage pathway; L-methionine from S-methyl-5-thio-alpha-D-ribose 1-phosphate: step 4/6.' . ?annotation11 a up:Similarity_Annotation ; rdfs:comment 'In the N-terminal section; belongs to the aldolase class II family. MtnB subfamily.' . ?annotation12 a up:Similarity_Annotation ; rdfs:comment 'In the C-terminal section; belongs to the HAD-like hydrolase superfamily. MasA/MtnC family.' . ?case13 up:classifiedWith GO:0000287 , keyword:460 . ?pfs14 up:annotation ?annotation15 , ?annotation21 , ?annotation27 . ?annotation15 faldo:begin ?pfsb16 ; faldo:end ?pfse17 ; up:ligand ?ligand18 ; rdf:type up:Binding_Site_Annotation . ?pfsb16 faldo:position ?thisPositionOn19 ; rdf:type faldo:ExactPosition . ?pfse17 faldo:position ?thisPositionOn20 ; rdf:type faldo:ExactPosition . ?ligand18 rdfs:subClassOf chebi:18420 . ?annotation21 faldo:begin ?pfsb22 ; faldo:end ?pfse23 ; up:ligand ?ligand24 ; rdf:type up:Binding_Site_Annotation . ?pfsb22 faldo:position ?thisPositionOn25 ; rdf:type faldo:ExactPosition . ?pfse23 faldo:position ?thisPositionOn26 ; rdf:type faldo:ExactPosition . ?ligand24 rdfs:subClassOf chebi:18420 . ?annotation27 faldo:begin ?pfsb28 ; faldo:end ?pfse29 ; up:ligand ?ligand30 ; rdf:type up:Binding_Site_Annotation . ?pfsb28 faldo:position ?thisPositionOn31 ; rdf:type faldo:ExactPosition . ?pfse29 faldo:position ?thisPositionOn32 ; rdf:type faldo:ExactPosition . ?ligand30 rdfs:subClassOf chebi:18420 . ?pfs33 up:annotation ?annotation34 . ?annotation34 faldo:begin ?pfsb35 ; faldo:end ?pfse36 ; rdf:type up:Region_Annotation ; rdfs:comment 'Methylthioribulose-1-phosphate dehydratase' . ?pfsb35 faldo:position ?thisPositionOn37 ; rdf:type faldo:ExactPosition . ?pfse36 faldo:position ?thisPositionOn38 ; rdf:type faldo:ExactPosition . ?pfs39 up:annotation ?annotation40 . ?annotation40 faldo:begin ?pfsb41 ; faldo:end ?pfse42 ; rdf:type up:Region_Annotation ; rdfs:comment 'Enolase-phosphatase E1' . ?pfsb41 faldo:position ?thisPositionOn43 ; rdf:type faldo:ExactPosition . ?pfse42 faldo:position ?thisPositionOn44 ; rdf:type faldo:ExactPosition . ?pfs45 up:annotation ?annotation46 . ?annotation46 faldo:begin ?pfsb47 ; faldo:end ?pfse48 ; up:ligand ?ligand49 ; rdf:type up:Binding_Site_Annotation . ?pfsb47 faldo:position ?thisPositionOn51 ; rdf:type faldo:ExactPosition . ?pfse48 faldo:position ?thisPositionOn52 ; rdf:type faldo:ExactPosition . ?ligand49 rdfs:subClassOf ?molecule50 . ?molecule50 rdfs:label 'substrate' . ?pfs53 up:annotation ?annotation54 . ?annotation54 faldo:begin ?pfsb55 ; faldo:end ?pfse56 ; rdf:type up:Active_Site_Annotation ; rdfs:comment 'Proton donor/acceptor; for methylthioribulose-1-phosphate dehydratase activity' . ?pfsb55 faldo:position ?thisPositionOn57 ; rdf:type faldo:ExactPosition . ?pfse56 faldo:position ?thisPositionOn58 ; rdf:type faldo:ExactPosition . ?pfs59 up:annotation ?annotation60 . ?annotation60 faldo:begin ?pfsb61 ; faldo:end ?pfse62 ; up:ligand ?ligand63 ; rdf:type up:Binding_Site_Annotation . ?pfsb61 faldo:position ?thisPositionOn64 ; rdf:type faldo:ExactPosition . ?pfse62 faldo:position ?thisPositionOn65 ; rdf:type faldo:ExactPosition . ?ligand63 rdfs:subClassOf chebi:29105 . ?pfs66 up:annotation ?annotation67 . ?annotation67 faldo:begin ?pfsb68 ; faldo:end ?pfse69 ; up:ligand ?ligand70 ; rdf:type up:Binding_Site_Annotation . ?pfsb68 faldo:position ?thisPositionOn71 ; rdf:type faldo:ExactPosition . ?pfse69 faldo:position ?thisPositionOn72 ; rdf:type faldo:ExactPosition . ?ligand70 rdfs:subClassOf chebi:29105 . ?pfs73 up:annotation ?annotation74 . ?annotation74 faldo:begin ?pfsb75 ; faldo:end ?pfse76 ; up:ligand ?ligand77 ; rdf:type up:Binding_Site_Annotation . ?pfsb75 faldo:position ?thisPositionOn78 ; rdf:type faldo:ExactPosition . ?pfse76 faldo:position ?thisPositionOn79 ; rdf:type faldo:ExactPosition . ?ligand77 rdfs:subClassOf chebi:29105 . ?pfs80 up:annotation ?annotation81 . ?annotation81 faldo:begin ?pfsb82 ; faldo:end ?pfse83 ; up:ligand ?ligand84 ; rdf:type up:Binding_Site_Annotation . ?pfsb82 faldo:position ?thisPositionOn86 ; rdf:type faldo:ExactPosition . ?pfse83 faldo:position ?thisPositionOn87 ; rdf:type faldo:ExactPosition . ?ligand84 rdfs:subClassOf ?molecule85 . ?molecule85 rdfs:label 'substrate' . ?pfs88 up:annotation ?annotation89 . ?annotation89 faldo:begin ?pfsb90 ; faldo:end ?pfse91 ; up:ligand ?ligand92 ; rdf:type up:Binding_Site_Annotation . ?pfsb90 faldo:position ?thisPositionOn94 ; rdf:type faldo:ExactPosition . ?pfse91 faldo:position ?thisPositionOn95 ; rdf:type faldo:ExactPosition . ?ligand92 rdfs:subClassOf ?molecule93 . ?molecule93 rdfs:label 'substrate' . _:814168 a rdf:Statement ; up:attribution _:814128 ; rdf:subject ?this ; rdf:predicate up:recommendedName ; rdf:object ?name0 . _:814169 a rdf:Statement ; up:attribution _:814130 ; rdf:subject ?this ; rdf:predicate up:domain ; rdf:object ?namedpart1 . _:814170 a rdf:Statement ; up:attribution _:814133 ; rdf:subject ?this ; rdf:predicate up:domain ; rdf:object ?namedpart2 . _:814171 a rdf:Statement ; up:attribution _:814134 ; rdf:subject ?this ; rdf:predicate up:annotation ; rdf:object ?annotation3 . _:814172 a rdf:Statement ; up:attribution _:814135 ; rdf:subject ?this ; rdf:predicate up:annotation ; rdf:object ?annotation5 . _:814173 a rdf:Statement ; up:attribution _:814136 ; rdf:subject ?this ; rdf:predicate up:annotation ; rdf:object ?annotation7 . _:814174 a rdf:Statement ; up:attribution _:814137 ; rdf:subject ?this ; rdf:predicate up:annotation ; rdf:object ?annotation8 . _:814175 a rdf:Statement ; up:attribution _:814138 ; rdf:subject ?this ; rdf:predicate up:annotation ; rdf:object ?annotation9 . _:814176 a rdf:Statement ; up:attribution _:814139 ; rdf:subject ?this ; rdf:predicate up:annotation ; rdf:object ?annotation10 . _:814177 a rdf:Statement ; up:attribution _:814140 ; rdf:subject ?this ; rdf:predicate up:annotation ; rdf:object ?annotation11 . _:814178 a rdf:Statement ; up:attribution _:814141 ; rdf:subject ?this ; rdf:predicate up:annotation ; rdf:object ?annotation12 . _:814179 a rdf:Statement ; up:attribution _:814142 ; rdf:subject ?this ; rdf:predicate up:classifiedWith ; rdf:object keyword:28 . _:814180 a rdf:Statement ; up:attribution _:814143 ; rdf:subject ?this ; rdf:predicate up:classifiedWith ; rdf:object keyword:378 . _:814181 a rdf:Statement ; up:attribution _:814144 ; rdf:subject ?this ; rdf:predicate up:classifiedWith ; rdf:object keyword:456 . _:814182 a rdf:Statement ; up:attribution _:814145 ; rdf:subject ?this ; rdf:predicate up:classifiedWith ; rdf:object keyword:479 . _:814183 a rdf:Statement ; up:attribution _:814146 ; rdf:subject ?this ; rdf:predicate up:classifiedWith ; rdf:object keyword:486 . _:814184 a rdf:Statement ; up:attribution _:814147 ; rdf:subject ?this ; rdf:predicate up:classifiedWith ; rdf:object keyword:511 . _:814185 a rdf:Statement ; up:attribution _:814148 ; rdf:subject ?this ; rdf:predicate up:classifiedWith ; rdf:object keyword:862 . _:814186 a rdf:Statement ; up:attribution _:814149 ; rdf:subject ?this ; rdf:predicate up:classifiedWith ; rdf:object GO:0008270 . _:814187 a rdf:Statement ; up:attribution _:814150 ; rdf:subject ?this ; rdf:predicate up:classifiedWith ; rdf:object GO:0043715 . _:814188 a rdf:Statement ; up:attribution _:814151 ; rdf:subject ?this ; rdf:predicate up:classifiedWith ; rdf:object GO:0043716 . _:814189 a rdf:Statement ; up:attribution _:814152 ; rdf:subject ?this ; rdf:predicate up:classifiedWith ; rdf:object GO:0046570 . _:814190 a rdf:Statement ; up:attribution _:814153 ; rdf:subject ?this ; rdf:predicate up:classifiedWith ; rdf:object GO:0019284 . _:814191 a rdf:Statement ; up:attribution _:814154 ; rdf:subject ?case13 ; rdf:predicate up:classifiedWith ; rdf:object keyword:460 . _:814192 a rdf:Statement ; up:attribution _:814155 ; rdf:subject ?case13 ; rdf:predicate up:classifiedWith ; rdf:object GO:0000287 . _:814193 a rdf:Statement ; up:source unirule:MF_03118 ; rdf:subject ?pfs14 ; rdf:predicate up:annotation ; rdf:object ?annotation15 . _:814194 a rdf:Statement ; up:attribution _:814156 ; rdf:subject ?pfs14 ; rdf:predicate up:annotation ; rdf:object ?annotation15 . _:814195 a rdf:Statement ; up:source unirule:MF_03118 ; rdf:subject ?pfs14 ; rdf:predicate up:annotation ; rdf:object ?annotation21 . _:814196 a rdf:Statement ; up:attribution _:814157 ; rdf:subject ?pfs14 ; rdf:predicate up:annotation ; rdf:object ?annotation21 . _:814197 a rdf:Statement ; up:source unirule:MF_03118 ; rdf:subject ?pfs14 ; rdf:predicate up:annotation ; rdf:object ?annotation27 . _:814198 a rdf:Statement ; up:attribution _:814158 ; rdf:subject ?pfs14 ; rdf:predicate up:annotation ; rdf:object ?annotation27 . _:814199 a rdf:Statement ; up:source unirule:MF_03118 ; rdf:subject ?pfs33 ; rdf:predicate up:annotation ; rdf:object ?annotation34 . _:814200 a rdf:Statement ; up:attribution _:814159 ; rdf:subject ?pfs33 ; rdf:predicate up:annotation ; rdf:object ?annotation34 . _:814201 a rdf:Statement ; up:source unirule:MF_03118 ; rdf:subject ?pfs39 ; rdf:predicate up:annotation ; rdf:object ?annotation40 . _:814202 a rdf:Statement ; up:attribution _:814160 ; rdf:subject ?pfs39 ; rdf:predicate up:annotation ; rdf:object ?annotation40 . _:814203 a rdf:Statement ; up:source unirule:MF_03118 ; rdf:subject ?pfs45 ; rdf:predicate up:annotation ; rdf:object ?annotation46 . _:814204 a rdf:Statement ; up:attribution _:814161 ; rdf:subject ?pfs45 ; rdf:predicate up:annotation ; rdf:object ?annotation46 . _:814205 a rdf:Statement ; up:source unirule:MF_03118 ; rdf:subject ?pfs53 ; rdf:predicate up:annotation ; rdf:object ?annotation54 . _:814206 a rdf:Statement ; up:attribution _:814162 ; rdf:subject ?pfs53 ; rdf:predicate up:annotation ; rdf:object ?annotation54 . _:814207 a rdf:Statement ; up:source unirule:MF_03118 ; rdf:subject ?pfs59 ; rdf:predicate up:annotation ; rdf:object ?annotation60 . _:814208 a rdf:Statement ; up:attribution _:814163 ; rdf:subject ?pfs59 ; rdf:predicate up:annotation ; rdf:object ?annotation60 . _:814209 a rdf:Statement ; up:source unirule:MF_03118 ; rdf:subject ?pfs66 ; rdf:predicate up:annotation ; rdf:object ?annotation67 . _:814210 a rdf:Statement ; up:attribution _:814164 ; rdf:subject ?pfs66 ; rdf:predicate up:annotation ; rdf:object ?annotation67 . _:814211 a rdf:Statement ; up:source unirule:MF_03118 ; rdf:subject ?pfs73 ; rdf:predicate up:annotation ; rdf:object ?annotation74 . _:814212 a rdf:Statement ; up:attribution _:814165 ; rdf:subject ?pfs73 ; rdf:predicate up:annotation ; rdf:object ?annotation74 . _:814213 a rdf:Statement ; up:source unirule:MF_03118 ; rdf:subject ?pfs80 ; rdf:predicate up:annotation ; rdf:object ?annotation81 . _:814214 a rdf:Statement ; up:attribution _:814166 ; rdf:subject ?pfs80 ; rdf:predicate up:annotation ; rdf:object ?annotation81 . _:814215 a rdf:Statement ; up:source unirule:MF_03118 ; rdf:subject ?pfs88 ; rdf:predicate up:annotation ; rdf:object ?annotation89 . _:814216 a rdf:Statement ; up:attribution _:814167 ; rdf:subject ?pfs88 ; rdf:predicate up:annotation ; rdf:object ?annotation89 . } WHERE { #baseURI: http://purl.uniprot.org/unirule/MF_03118 #Rule MF_03118 Created by:pedruzzi on:2010-04-01 Modified by:ecastro on:2023-06-01 ?this up:organism ?thisOrganism ; rdfs:seeAlso signature:MF_03118 . ?thisOrganism rdfs:subClassOf+ taxon:33090 . BIND(URI(CONCAT(STR(?this), '#MF_03118a0')) AS ?name0) . BIND(URI(CONCAT(STR(?this), '#MF_03118a1')) AS ?namedpart1) . BIND(URI(CONCAT(STR(?this), '#MF_03118a2')) AS ?namedpart2) . BIND(URI(CONCAT(STR(?this), '#MF_03118a3')) AS ?annotation3) . BIND(URI(CONCAT(STR(?this), '#MF_03118a5')) AS ?annotation5) . BIND(URI(CONCAT(STR(?this), '#MF_03118a7')) AS ?annotation7) . BIND(URI(CONCAT(STR(?this), '#MF_03118a8')) AS ?annotation8) . BIND(URI(CONCAT(STR(?this), '#MF_03118a9')) AS ?annotation9) . BIND(URI(CONCAT(STR(?this), '#MF_03118a10')) AS ?annotation10) . BIND(URI(CONCAT(STR(?this), '#MF_03118a11')) AS ?annotation11) . BIND(URI(CONCAT(STR(?this), '#MF_03118a12')) AS ?annotation12) . OPTIONAL { ?this up:sequence ?thisSequence . ?thisSequence rdf:value ?thisSequenceValue . ?templateMotifMatch100 faldo:location ?templateMotifSequenceMatchRegionQ9FN41101 ; edam:is_output_of ?templateMotifSequenceProfileAlignmentOperationQ9FN41103 ; rdf:type edam:data_0869 ; rdf:value ?templateMotifCigarQ9FN41MF_0311896 . ?templateMotifSequenceMatchRegionQ9FN41101 faldo:begin ?templateMotifSequenceMatchBeginQ9FN41102 . ?templateMotifSequenceMatchBeginQ9FN41102 faldo:position ?templateMotifSequenceMatchBeginPositionQ9FN4197 ; faldo:reference isoform:Q9FN41-1 . ?templateMotifSequenceProfileAlignmentOperationQ9FN41103 edam:has_input signature:MF_03118 ; rdf:type edam:operation_0300 . ?targetMotifMatch104 faldo:location ?targetMotifMatchRegionMatch105 ; edam:is_output_of ?targetMotifSequenceAlignmentOperationMF_03118107 ; rdf:type edam:data_0869 ; rdf:value ?targetMotifMatchCigarQ9FN41MF_0311898 . ?targetMotifMatchRegionMatch105 faldo:begin ?targetMotifMatchRegionMatchBeginMF_03118106 . ?targetMotifMatchRegionMatchBeginMF_03118106 faldo:position ?targetMotifMatchRegionMatchBeginPositionMF_0311899 ; faldo:reference ?thisSequence . ?targetMotifSequenceAlignmentOperationMF_03118107 edam:has_input signature:MF_03118 ; rdf:type edam:operation_0300 . BIND(?this AS ?tagFTGRP_1) . BIND(STRLEN(REPLACE(SUBSTR(?templateMotifCigarQ9FN41MF_0311896, 1, (STRLEN(?templateMotifCigarQ9FN41MF_0311896) - STRLEN(REPLACE(?templateMotifCigarQ9FN41MF_0311896, CONCAT('^(?:-*[^-]){', STR(((271 - ?templateMotifSequenceMatchBeginPositionQ9FN4197) + 1)), '}'), '')))), '[a-z]', '')) AS ?step1108) . BIND((STRLEN(SUBSTR(?targetMotifMatchCigarQ9FN41MF_0311898, 1, (STRLEN(?targetMotifMatchCigarQ9FN41MF_0311898) - STRLEN(REPLACE(?targetMotifMatchCigarQ9FN41MF_0311898, CONCAT('^(?:[a-z]*(?:[A-Z]|-)){', STR(?step1108), '}'), ''))))) - STRLEN(REPLACE(SUBSTR(?targetMotifMatchCigarQ9FN41MF_0311898, 1, (STRLEN(?targetMotifMatchCigarQ9FN41MF_0311898) - STRLEN(REPLACE(?targetMotifMatchCigarQ9FN41MF_0311898, CONCAT('^(?:[a-z]*(?:[A-Z]|-)){', STR(?step1108), '}'), '')))), '[^-]', ''))) AS ?step2109) . BIND(((?step2109 + ?targetMotifMatchRegionMatchBeginPositionMF_0311899) - 1) AS ?thisPositionOn19) . BIND(?thisPositionOn19 AS ?thisPositionOn20) . BIND(?this AS ?pfs1t110) . BIND(URI(CONCAT(STR(?thisSequence), '#position', STR(?thisPositionOn19))) AS ?pfsb16) . BIND(URI(CONCAT(STR(?thisSequence), '#position', STR(?thisPositionOn20))) AS ?pfse17) . FILTER ((SUBSTR(?thisSequenceValue, ?thisPositionOn19, 1) = 'D')) . BIND(STRLEN(REPLACE(SUBSTR(?templateMotifCigarQ9FN41MF_0311896, 1, (STRLEN(?templateMotifCigarQ9FN41MF_0311896) - STRLEN(REPLACE(?templateMotifCigarQ9FN41MF_0311896, CONCAT('^(?:-*[^-]){', STR(((273 - ?templateMotifSequenceMatchBeginPositionQ9FN4197) + 1)), '}'), '')))), '[a-z]', '')) AS ?step1111) . BIND((STRLEN(SUBSTR(?targetMotifMatchCigarQ9FN41MF_0311898, 1, (STRLEN(?targetMotifMatchCigarQ9FN41MF_0311898) - STRLEN(REPLACE(?targetMotifMatchCigarQ9FN41MF_0311898, CONCAT('^(?:[a-z]*(?:[A-Z]|-)){', STR(?step1111), '}'), ''))))) - STRLEN(REPLACE(SUBSTR(?targetMotifMatchCigarQ9FN41MF_0311898, 1, (STRLEN(?targetMotifMatchCigarQ9FN41MF_0311898) - STRLEN(REPLACE(?targetMotifMatchCigarQ9FN41MF_0311898, CONCAT('^(?:[a-z]*(?:[A-Z]|-)){', STR(?step1111), '}'), '')))), '[^-]', ''))) AS ?step2112) . BIND(((?step2112 + ?targetMotifMatchRegionMatchBeginPositionMF_0311899) - 1) AS ?thisPositionOn25) . BIND(?thisPositionOn25 AS ?thisPositionOn26) . BIND(?this AS ?pfs1t113) . BIND(URI(CONCAT(STR(?thisSequence), '#position', STR(?thisPositionOn25))) AS ?pfsb22) . BIND(URI(CONCAT(STR(?thisSequence), '#position', STR(?thisPositionOn26))) AS ?pfse23) . FILTER ((SUBSTR(?thisSequenceValue, ?thisPositionOn25, 1) = 'E')) . BIND(STRLEN(REPLACE(SUBSTR(?templateMotifCigarQ9FN41MF_0311896, 1, (STRLEN(?templateMotifCigarQ9FN41MF_0311896) - STRLEN(REPLACE(?templateMotifCigarQ9FN41MF_0311896, CONCAT('^(?:-*[^-]){', STR(((466 - ?templateMotifSequenceMatchBeginPositionQ9FN4197) + 1)), '}'), '')))), '[a-z]', '')) AS ?step1114) . BIND((STRLEN(SUBSTR(?targetMotifMatchCigarQ9FN41MF_0311898, 1, (STRLEN(?targetMotifMatchCigarQ9FN41MF_0311898) - STRLEN(REPLACE(?targetMotifMatchCigarQ9FN41MF_0311898, CONCAT('^(?:[a-z]*(?:[A-Z]|-)){', STR(?step1114), '}'), ''))))) - STRLEN(REPLACE(SUBSTR(?targetMotifMatchCigarQ9FN41MF_0311898, 1, (STRLEN(?targetMotifMatchCigarQ9FN41MF_0311898) - STRLEN(REPLACE(?targetMotifMatchCigarQ9FN41MF_0311898, CONCAT('^(?:[a-z]*(?:[A-Z]|-)){', STR(?step1114), '}'), '')))), '[^-]', ''))) AS ?step2115) . BIND(((?step2115 + ?targetMotifMatchRegionMatchBeginPositionMF_0311899) - 1) AS ?thisPositionOn31) . BIND(?thisPositionOn31 AS ?thisPositionOn32) . BIND(?this AS ?pfs1t116) . BIND(URI(CONCAT(STR(?thisSequence), '#position', STR(?thisPositionOn31))) AS ?pfsb28) . BIND(URI(CONCAT(STR(?thisSequence), '#position', STR(?thisPositionOn32))) AS ?pfse29) . FILTER ((SUBSTR(?thisSequenceValue, ?thisPositionOn31, 1) = 'D')) . BIND(?this AS ?pfs14) . } OPTIONAL { ?this up:sequence ?thisSequence . ?thisSequence rdf:value ?thisSequenceValue . ?templateMotifMatch121 faldo:location ?templateMotifSequenceMatchRegionQ9FN41122 ; edam:is_output_of ?templateMotifSequenceProfileAlignmentOperationQ9FN41124 ; rdf:type edam:data_0869 ; rdf:value ?templateMotifCigarQ9FN41MF_03118117 . ?templateMotifSequenceMatchRegionQ9FN41122 faldo:begin ?templateMotifSequenceMatchBeginQ9FN41123 . ?templateMotifSequenceMatchBeginQ9FN41123 faldo:position ?templateMotifSequenceMatchBeginPositionQ9FN41118 ; faldo:reference isoform:Q9FN41-1 . ?templateMotifSequenceProfileAlignmentOperationQ9FN41124 edam:has_input signature:MF_03118 ; rdf:type edam:operation_0300 . ?targetMotifMatch125 faldo:location ?targetMotifMatchRegionMatch126 ; edam:is_output_of ?targetMotifSequenceAlignmentOperationMF_03118128 ; rdf:type edam:data_0869 ; rdf:value ?targetMotifMatchCigarQ9FN41MF_03118119 . ?targetMotifMatchRegionMatch126 faldo:begin ?targetMotifMatchRegionMatchBeginMF_03118127 . ?targetMotifMatchRegionMatchBeginMF_03118127 faldo:position ?targetMotifMatchRegionMatchBeginPositionMF_03118120 ; faldo:reference ?thisSequence . ?targetMotifSequenceAlignmentOperationMF_03118128 edam:has_input signature:MF_03118 ; rdf:type edam:operation_0300 . BIND(1 AS ?thisPositionOn37) . BIND(STRLEN(REPLACE(SUBSTR(?templateMotifCigarQ9FN41MF_03118117, 1, (STRLEN(?templateMotifCigarQ9FN41MF_03118117) - STRLEN(REPLACE(?templateMotifCigarQ9FN41MF_03118117, CONCAT('^(?:-*[^-]){', STR(((237 - ?templateMotifSequenceMatchBeginPositionQ9FN41118) + 1)), '}'), '')))), '[a-z]', '')) AS ?step1129) . BIND((STRLEN(SUBSTR(?targetMotifMatchCigarQ9FN41MF_03118119, 1, (STRLEN(?targetMotifMatchCigarQ9FN41MF_03118119) - STRLEN(REPLACE(?targetMotifMatchCigarQ9FN41MF_03118119, CONCAT('^(?:[a-z]*(?:[A-Z]|-)){', STR(?step1129), '}'), ''))))) - STRLEN(REPLACE(SUBSTR(?targetMotifMatchCigarQ9FN41MF_03118119, 1, (STRLEN(?targetMotifMatchCigarQ9FN41MF_03118119) - STRLEN(REPLACE(?targetMotifMatchCigarQ9FN41MF_03118119, CONCAT('^(?:[a-z]*(?:[A-Z]|-)){', STR(?step1129), '}'), '')))), '[^-]', ''))) AS ?step2130) . BIND(((?step2130 + ?targetMotifMatchRegionMatchBeginPositionMF_03118120) - 1) AS ?thisPositionOn38) . BIND(?this AS ?pfs2t131) . BIND(URI(CONCAT(STR(?thisSequence), '#position', STR(?thisPositionOn37))) AS ?pfsb35) . BIND(URI(CONCAT(STR(?thisSequence), '#position', STR(?thisPositionOn38))) AS ?pfse36) . FILTER ((BOUND(?thisPositionOn37) && BOUND(?thisPositionOn38))) . BIND(URI(CONCAT(STR(?this), '#MF_03118a34')) AS ?annotation34) . BIND(?this AS ?pfs33) . } OPTIONAL { ?this up:sequence ?thisSequence . ?thisSequence rdf:value ?thisSequenceValue . ?templateMotifMatch136 faldo:location ?templateMotifSequenceMatchRegionQ9FN41137 ; edam:is_output_of ?templateMotifSequenceProfileAlignmentOperationQ9FN41139 ; rdf:type edam:data_0869 ; rdf:value ?templateMotifCigarQ9FN41MF_03118132 . ?templateMotifSequenceMatchRegionQ9FN41137 faldo:begin ?templateMotifSequenceMatchBeginQ9FN41138 . ?templateMotifSequenceMatchBeginQ9FN41138 faldo:position ?templateMotifSequenceMatchBeginPositionQ9FN41133 ; faldo:reference isoform:Q9FN41-1 . ?templateMotifSequenceProfileAlignmentOperationQ9FN41139 edam:has_input signature:MF_03118 ; rdf:type edam:operation_0300 . ?targetMotifMatch140 faldo:location ?targetMotifMatchRegionMatch141 ; edam:is_output_of ?targetMotifSequenceAlignmentOperationMF_03118143 ; rdf:type edam:data_0869 ; rdf:value ?targetMotifMatchCigarQ9FN41MF_03118134 . ?targetMotifMatchRegionMatch141 faldo:begin ?targetMotifMatchRegionMatchBeginMF_03118142 . ?targetMotifMatchRegionMatchBeginMF_03118142 faldo:position ?targetMotifMatchRegionMatchBeginPositionMF_03118135 ; faldo:reference ?thisSequence . ?targetMotifSequenceAlignmentOperationMF_03118143 edam:has_input signature:MF_03118 ; rdf:type edam:operation_0300 . BIND(STRLEN(REPLACE(SUBSTR(?templateMotifCigarQ9FN41MF_03118132, 1, (STRLEN(?templateMotifCigarQ9FN41MF_03118132) - STRLEN(REPLACE(?templateMotifCigarQ9FN41MF_03118132, CONCAT('^(?:-*[^-]){', STR(((268 - ?templateMotifSequenceMatchBeginPositionQ9FN41133) + 1)), '}'), '')))), '[a-z]', '')) AS ?step1144) . BIND((STRLEN(SUBSTR(?targetMotifMatchCigarQ9FN41MF_03118134, 1, (STRLEN(?targetMotifMatchCigarQ9FN41MF_03118134) - STRLEN(REPLACE(?targetMotifMatchCigarQ9FN41MF_03118134, CONCAT('^(?:[a-z]*(?:[A-Z]|-)){', STR(?step1144), '}'), ''))))) - STRLEN(REPLACE(SUBSTR(?targetMotifMatchCigarQ9FN41MF_03118134, 1, (STRLEN(?targetMotifMatchCigarQ9FN41MF_03118134) - STRLEN(REPLACE(?targetMotifMatchCigarQ9FN41MF_03118134, CONCAT('^(?:[a-z]*(?:[A-Z]|-)){', STR(?step1144), '}'), '')))), '[^-]', ''))) AS ?step2145) . BIND(((?step2145 + ?targetMotifMatchRegionMatchBeginPositionMF_03118135) - 1) AS ?thisPositionOn43) . BIND(STRLEN(?thisSequenceValue) AS ?thisPositionOn44) . BIND(?this AS ?pfs2t146) . BIND(URI(CONCAT(STR(?thisSequence), '#position', STR(?thisPositionOn43))) AS ?pfsb41) . BIND(URI(CONCAT(STR(?thisSequence), '#position', STR(?thisPositionOn44))) AS ?pfse42) . FILTER ((BOUND(?thisPositionOn43) && BOUND(?thisPositionOn44))) . BIND(URI(CONCAT(STR(?this), '#MF_03118a40')) AS ?annotation40) . BIND(?this AS ?pfs39) . } OPTIONAL { ?this up:sequence ?thisSequence . ?thisSequence rdf:value ?thisSequenceValue . ?templateMotifMatch151 faldo:location ?templateMotifSequenceMatchRegionQ9FN41152 ; edam:is_output_of ?templateMotifSequenceProfileAlignmentOperationQ9FN41154 ; rdf:type edam:data_0869 ; rdf:value ?templateMotifCigarQ9FN41MF_03118147 . ?templateMotifSequenceMatchRegionQ9FN41152 faldo:begin ?templateMotifSequenceMatchBeginQ9FN41153 . ?templateMotifSequenceMatchBeginQ9FN41153 faldo:position ?templateMotifSequenceMatchBeginPositionQ9FN41148 ; faldo:reference isoform:Q9FN41-1 . ?templateMotifSequenceProfileAlignmentOperationQ9FN41154 edam:has_input signature:MF_03118 ; rdf:type edam:operation_0300 . ?targetMotifMatch155 faldo:location ?targetMotifMatchRegionMatch156 ; edam:is_output_of ?targetMotifSequenceAlignmentOperationMF_03118158 ; rdf:type edam:data_0869 ; rdf:value ?targetMotifMatchCigarQ9FN41MF_03118149 . ?targetMotifMatchRegionMatch156 faldo:begin ?targetMotifMatchRegionMatchBeginMF_03118157 . ?targetMotifMatchRegionMatchBeginMF_03118157 faldo:position ?targetMotifMatchRegionMatchBeginPositionMF_03118150 ; faldo:reference ?thisSequence . ?targetMotifSequenceAlignmentOperationMF_03118158 edam:has_input signature:MF_03118 ; rdf:type edam:operation_0300 . BIND(STRLEN(REPLACE(SUBSTR(?templateMotifCigarQ9FN41MF_03118147, 1, (STRLEN(?templateMotifCigarQ9FN41MF_03118147) - STRLEN(REPLACE(?templateMotifCigarQ9FN41MF_03118147, CONCAT('^(?:-*[^-]){', STR(((406 - ?templateMotifSequenceMatchBeginPositionQ9FN41148) + 1)), '}'), '')))), '[a-z]', '')) AS ?step1159) . BIND((STRLEN(SUBSTR(?targetMotifMatchCigarQ9FN41MF_03118149, 1, (STRLEN(?targetMotifMatchCigarQ9FN41MF_03118149) - STRLEN(REPLACE(?targetMotifMatchCigarQ9FN41MF_03118149, CONCAT('^(?:[a-z]*(?:[A-Z]|-)){', STR(?step1159), '}'), ''))))) - STRLEN(REPLACE(SUBSTR(?targetMotifMatchCigarQ9FN41MF_03118149, 1, (STRLEN(?targetMotifMatchCigarQ9FN41MF_03118149) - STRLEN(REPLACE(?targetMotifMatchCigarQ9FN41MF_03118149, CONCAT('^(?:[a-z]*(?:[A-Z]|-)){', STR(?step1159), '}'), '')))), '[^-]', ''))) AS ?step2160) . BIND(((?step2160 + ?targetMotifMatchRegionMatchBeginPositionMF_03118150) - 1) AS ?thisPositionOn51) . BIND(STRLEN(REPLACE(SUBSTR(?templateMotifCigarQ9FN41MF_03118147, 1, (STRLEN(?templateMotifCigarQ9FN41MF_03118147) - STRLEN(REPLACE(?templateMotifCigarQ9FN41MF_03118147, CONCAT('^(?:-*[^-]){', STR(((407 - ?templateMotifSequenceMatchBeginPositionQ9FN41148) + 1)), '}'), '')))), '[a-z]', '')) AS ?step1161) . BIND((STRLEN(SUBSTR(?targetMotifMatchCigarQ9FN41MF_03118149, 1, (STRLEN(?targetMotifMatchCigarQ9FN41MF_03118149) - STRLEN(REPLACE(?targetMotifMatchCigarQ9FN41MF_03118149, CONCAT('^(?:[a-z]*(?:[A-Z]|-)){', STR(?step1161), '}'), ''))))) - STRLEN(REPLACE(SUBSTR(?targetMotifMatchCigarQ9FN41MF_03118149, 1, (STRLEN(?targetMotifMatchCigarQ9FN41MF_03118149) - STRLEN(REPLACE(?targetMotifMatchCigarQ9FN41MF_03118149, CONCAT('^(?:[a-z]*(?:[A-Z]|-)){', STR(?step1161), '}'), '')))), '[^-]', ''))) AS ?step2162) . BIND(((?step2162 + ?targetMotifMatchRegionMatchBeginPositionMF_03118150) - 1) AS ?thisPositionOn52) . BIND(?this AS ?pfs2t163) . BIND(URI(CONCAT(STR(?thisSequence), '#position', STR(?thisPositionOn51))) AS ?pfsb47) . BIND(URI(CONCAT(STR(?thisSequence), '#position', STR(?thisPositionOn52))) AS ?pfse48) . FILTER ((SUBSTR(?thisSequenceValue, ?thisPositionOn51, (?thisPositionOn52 - ?thisPositionOn51)) = 'SS')) . BIND(URI(CONCAT(STR(?this), '#MF_03118a46')) AS ?annotation46) . BIND(?this AS ?pfs45) . } OPTIONAL { ?this up:sequence ?thisSequence . ?thisSequence rdf:value ?thisSequenceValue . ?templateMotifMatch168 faldo:location ?templateMotifSequenceMatchRegionQ9FN41169 ; edam:is_output_of ?templateMotifSequenceProfileAlignmentOperationQ9FN41171 ; rdf:type edam:data_0869 ; rdf:value ?templateMotifCigarQ9FN41MF_03118164 . ?templateMotifSequenceMatchRegionQ9FN41169 faldo:begin ?templateMotifSequenceMatchBeginQ9FN41170 . ?templateMotifSequenceMatchBeginQ9FN41170 faldo:position ?templateMotifSequenceMatchBeginPositionQ9FN41165 ; faldo:reference isoform:Q9FN41-1 . ?templateMotifSequenceProfileAlignmentOperationQ9FN41171 edam:has_input signature:MF_03118 ; rdf:type edam:operation_0300 . ?targetMotifMatch172 faldo:location ?targetMotifMatchRegionMatch173 ; edam:is_output_of ?targetMotifSequenceAlignmentOperationMF_03118175 ; rdf:type edam:data_0869 ; rdf:value ?targetMotifMatchCigarQ9FN41MF_03118166 . ?targetMotifMatchRegionMatch173 faldo:begin ?targetMotifMatchRegionMatchBeginMF_03118174 . ?targetMotifMatchRegionMatchBeginMF_03118174 faldo:position ?targetMotifMatchRegionMatchBeginPositionMF_03118167 ; faldo:reference ?thisSequence . ?targetMotifSequenceAlignmentOperationMF_03118175 edam:has_input signature:MF_03118 ; rdf:type edam:operation_0300 . BIND(STRLEN(REPLACE(SUBSTR(?templateMotifCigarQ9FN41MF_03118164, 1, (STRLEN(?templateMotifCigarQ9FN41MF_03118164) - STRLEN(REPLACE(?templateMotifCigarQ9FN41MF_03118164, CONCAT('^(?:-*[^-]){', STR(((152 - ?templateMotifSequenceMatchBeginPositionQ9FN41165) + 1)), '}'), '')))), '[a-z]', '')) AS ?step1176) . BIND((STRLEN(SUBSTR(?targetMotifMatchCigarQ9FN41MF_03118166, 1, (STRLEN(?targetMotifMatchCigarQ9FN41MF_03118166) - STRLEN(REPLACE(?targetMotifMatchCigarQ9FN41MF_03118166, CONCAT('^(?:[a-z]*(?:[A-Z]|-)){', STR(?step1176), '}'), ''))))) - STRLEN(REPLACE(SUBSTR(?targetMotifMatchCigarQ9FN41MF_03118166, 1, (STRLEN(?targetMotifMatchCigarQ9FN41MF_03118166) - STRLEN(REPLACE(?targetMotifMatchCigarQ9FN41MF_03118166, CONCAT('^(?:[a-z]*(?:[A-Z]|-)){', STR(?step1176), '}'), '')))), '[^-]', ''))) AS ?step2177) . BIND(((?step2177 + ?targetMotifMatchRegionMatchBeginPositionMF_03118167) - 1) AS ?thisPositionOn57) . BIND(?thisPositionOn57 AS ?thisPositionOn58) . BIND(?this AS ?pfs2t178) . BIND(URI(CONCAT(STR(?thisSequence), '#position', STR(?thisPositionOn57))) AS ?pfsb55) . BIND(URI(CONCAT(STR(?thisSequence), '#position', STR(?thisPositionOn58))) AS ?pfse56) . FILTER ((SUBSTR(?thisSequenceValue, ?thisPositionOn57, 1) = 'E')) . BIND(URI(CONCAT(STR(?this), '#MF_03118a54')) AS ?annotation54) . BIND(?this AS ?pfs53) . } OPTIONAL { ?this up:sequence ?thisSequence . ?thisSequence rdf:value ?thisSequenceValue . ?templateMotifMatch183 faldo:location ?templateMotifSequenceMatchRegionQ9FN41184 ; edam:is_output_of ?templateMotifSequenceProfileAlignmentOperationQ9FN41186 ; rdf:type edam:data_0869 ; rdf:value ?templateMotifCigarQ9FN41MF_03118179 . ?templateMotifSequenceMatchRegionQ9FN41184 faldo:begin ?templateMotifSequenceMatchBeginQ9FN41185 . ?templateMotifSequenceMatchBeginQ9FN41185 faldo:position ?templateMotifSequenceMatchBeginPositionQ9FN41180 ; faldo:reference isoform:Q9FN41-1 . ?templateMotifSequenceProfileAlignmentOperationQ9FN41186 edam:has_input signature:MF_03118 ; rdf:type edam:operation_0300 . ?targetMotifMatch187 faldo:location ?targetMotifMatchRegionMatch188 ; edam:is_output_of ?targetMotifSequenceAlignmentOperationMF_03118190 ; rdf:type edam:data_0869 ; rdf:value ?targetMotifMatchCigarQ9FN41MF_03118181 . ?targetMotifMatchRegionMatch188 faldo:begin ?targetMotifMatchRegionMatchBeginMF_03118189 . ?targetMotifMatchRegionMatchBeginMF_03118189 faldo:position ?targetMotifMatchRegionMatchBeginPositionMF_03118182 ; faldo:reference ?thisSequence . ?targetMotifSequenceAlignmentOperationMF_03118190 edam:has_input signature:MF_03118 ; rdf:type edam:operation_0300 . BIND(STRLEN(REPLACE(SUBSTR(?templateMotifCigarQ9FN41MF_03118179, 1, (STRLEN(?templateMotifCigarQ9FN41MF_03118179) - STRLEN(REPLACE(?templateMotifCigarQ9FN41MF_03118179, CONCAT('^(?:-*[^-]){', STR(((127 - ?templateMotifSequenceMatchBeginPositionQ9FN41180) + 1)), '}'), '')))), '[a-z]', '')) AS ?step1191) . BIND((STRLEN(SUBSTR(?targetMotifMatchCigarQ9FN41MF_03118181, 1, (STRLEN(?targetMotifMatchCigarQ9FN41MF_03118181) - STRLEN(REPLACE(?targetMotifMatchCigarQ9FN41MF_03118181, CONCAT('^(?:[a-z]*(?:[A-Z]|-)){', STR(?step1191), '}'), ''))))) - STRLEN(REPLACE(SUBSTR(?targetMotifMatchCigarQ9FN41MF_03118181, 1, (STRLEN(?targetMotifMatchCigarQ9FN41MF_03118181) - STRLEN(REPLACE(?targetMotifMatchCigarQ9FN41MF_03118181, CONCAT('^(?:[a-z]*(?:[A-Z]|-)){', STR(?step1191), '}'), '')))), '[^-]', ''))) AS ?step2192) . BIND(((?step2192 + ?targetMotifMatchRegionMatchBeginPositionMF_03118182) - 1) AS ?thisPositionOn64) . BIND(?thisPositionOn64 AS ?thisPositionOn65) . BIND(?this AS ?pfs2t193) . BIND(URI(CONCAT(STR(?thisSequence), '#position', STR(?thisPositionOn64))) AS ?pfsb61) . BIND(URI(CONCAT(STR(?thisSequence), '#position', STR(?thisPositionOn65))) AS ?pfse62) . FILTER ((SUBSTR(?thisSequenceValue, ?thisPositionOn64, 1) = 'H')) . BIND(URI(CONCAT(STR(?this), '#MF_03118a60')) AS ?annotation60) . BIND(?this AS ?pfs59) . } OPTIONAL { ?this up:sequence ?thisSequence . ?thisSequence rdf:value ?thisSequenceValue . ?templateMotifMatch198 faldo:location ?templateMotifSequenceMatchRegionQ9FN41199 ; edam:is_output_of ?templateMotifSequenceProfileAlignmentOperationQ9FN41201 ; rdf:type edam:data_0869 ; rdf:value ?templateMotifCigarQ9FN41MF_03118194 . ?templateMotifSequenceMatchRegionQ9FN41199 faldo:begin ?templateMotifSequenceMatchBeginQ9FN41200 . ?templateMotifSequenceMatchBeginQ9FN41200 faldo:position ?templateMotifSequenceMatchBeginPositionQ9FN41195 ; faldo:reference isoform:Q9FN41-1 . ?templateMotifSequenceProfileAlignmentOperationQ9FN41201 edam:has_input signature:MF_03118 ; rdf:type edam:operation_0300 . ?targetMotifMatch202 faldo:location ?targetMotifMatchRegionMatch203 ; edam:is_output_of ?targetMotifSequenceAlignmentOperationMF_03118205 ; rdf:type edam:data_0869 ; rdf:value ?targetMotifMatchCigarQ9FN41MF_03118196 . ?targetMotifMatchRegionMatch203 faldo:begin ?targetMotifMatchRegionMatchBeginMF_03118204 . ?targetMotifMatchRegionMatchBeginMF_03118204 faldo:position ?targetMotifMatchRegionMatchBeginPositionMF_03118197 ; faldo:reference ?thisSequence . ?targetMotifSequenceAlignmentOperationMF_03118205 edam:has_input signature:MF_03118 ; rdf:type edam:operation_0300 . BIND(STRLEN(REPLACE(SUBSTR(?templateMotifCigarQ9FN41MF_03118194, 1, (STRLEN(?templateMotifCigarQ9FN41MF_03118194) - STRLEN(REPLACE(?templateMotifCigarQ9FN41MF_03118194, CONCAT('^(?:-*[^-]){', STR(((129 - ?templateMotifSequenceMatchBeginPositionQ9FN41195) + 1)), '}'), '')))), '[a-z]', '')) AS ?step1206) . BIND((STRLEN(SUBSTR(?targetMotifMatchCigarQ9FN41MF_03118196, 1, (STRLEN(?targetMotifMatchCigarQ9FN41MF_03118196) - STRLEN(REPLACE(?targetMotifMatchCigarQ9FN41MF_03118196, CONCAT('^(?:[a-z]*(?:[A-Z]|-)){', STR(?step1206), '}'), ''))))) - STRLEN(REPLACE(SUBSTR(?targetMotifMatchCigarQ9FN41MF_03118196, 1, (STRLEN(?targetMotifMatchCigarQ9FN41MF_03118196) - STRLEN(REPLACE(?targetMotifMatchCigarQ9FN41MF_03118196, CONCAT('^(?:[a-z]*(?:[A-Z]|-)){', STR(?step1206), '}'), '')))), '[^-]', ''))) AS ?step2207) . BIND(((?step2207 + ?targetMotifMatchRegionMatchBeginPositionMF_03118197) - 1) AS ?thisPositionOn71) . BIND(?thisPositionOn71 AS ?thisPositionOn72) . BIND(?this AS ?pfs2t208) . BIND(URI(CONCAT(STR(?thisSequence), '#position', STR(?thisPositionOn71))) AS ?pfsb68) . BIND(URI(CONCAT(STR(?thisSequence), '#position', STR(?thisPositionOn72))) AS ?pfse69) . FILTER ((SUBSTR(?thisSequenceValue, ?thisPositionOn71, 1) = 'H')) . BIND(URI(CONCAT(STR(?this), '#MF_03118a67')) AS ?annotation67) . BIND(?this AS ?pfs66) . } OPTIONAL { ?this up:sequence ?thisSequence . ?thisSequence rdf:value ?thisSequenceValue . ?templateMotifMatch213 faldo:location ?templateMotifSequenceMatchRegionQ9FN41214 ; edam:is_output_of ?templateMotifSequenceProfileAlignmentOperationQ9FN41216 ; rdf:type edam:data_0869 ; rdf:value ?templateMotifCigarQ9FN41MF_03118209 . ?templateMotifSequenceMatchRegionQ9FN41214 faldo:begin ?templateMotifSequenceMatchBeginQ9FN41215 . ?templateMotifSequenceMatchBeginQ9FN41215 faldo:position ?templateMotifSequenceMatchBeginPositionQ9FN41210 ; faldo:reference isoform:Q9FN41-1 . ?templateMotifSequenceProfileAlignmentOperationQ9FN41216 edam:has_input signature:MF_03118 ; rdf:type edam:operation_0300 . ?targetMotifMatch217 faldo:location ?targetMotifMatchRegionMatch218 ; edam:is_output_of ?targetMotifSequenceAlignmentOperationMF_03118220 ; rdf:type edam:data_0869 ; rdf:value ?targetMotifMatchCigarQ9FN41MF_03118211 . ?targetMotifMatchRegionMatch218 faldo:begin ?targetMotifMatchRegionMatchBeginMF_03118219 . ?targetMotifMatchRegionMatchBeginMF_03118219 faldo:position ?targetMotifMatchRegionMatchBeginPositionMF_03118212 ; faldo:reference ?thisSequence . ?targetMotifSequenceAlignmentOperationMF_03118220 edam:has_input signature:MF_03118 ; rdf:type edam:operation_0300 . BIND(STRLEN(REPLACE(SUBSTR(?templateMotifCigarQ9FN41MF_03118209, 1, (STRLEN(?templateMotifCigarQ9FN41MF_03118209) - STRLEN(REPLACE(?templateMotifCigarQ9FN41MF_03118209, CONCAT('^(?:-*[^-]){', STR(((202 - ?templateMotifSequenceMatchBeginPositionQ9FN41210) + 1)), '}'), '')))), '[a-z]', '')) AS ?step1221) . BIND((STRLEN(SUBSTR(?targetMotifMatchCigarQ9FN41MF_03118211, 1, (STRLEN(?targetMotifMatchCigarQ9FN41MF_03118211) - STRLEN(REPLACE(?targetMotifMatchCigarQ9FN41MF_03118211, CONCAT('^(?:[a-z]*(?:[A-Z]|-)){', STR(?step1221), '}'), ''))))) - STRLEN(REPLACE(SUBSTR(?targetMotifMatchCigarQ9FN41MF_03118211, 1, (STRLEN(?targetMotifMatchCigarQ9FN41MF_03118211) - STRLEN(REPLACE(?targetMotifMatchCigarQ9FN41MF_03118211, CONCAT('^(?:[a-z]*(?:[A-Z]|-)){', STR(?step1221), '}'), '')))), '[^-]', ''))) AS ?step2222) . BIND(((?step2222 + ?targetMotifMatchRegionMatchBeginPositionMF_03118212) - 1) AS ?thisPositionOn78) . BIND(?thisPositionOn78 AS ?thisPositionOn79) . BIND(?this AS ?pfs2t223) . BIND(URI(CONCAT(STR(?thisSequence), '#position', STR(?thisPositionOn78))) AS ?pfsb75) . BIND(URI(CONCAT(STR(?thisSequence), '#position', STR(?thisPositionOn79))) AS ?pfse76) . FILTER ((SUBSTR(?thisSequenceValue, ?thisPositionOn78, 1) = 'H')) . BIND(URI(CONCAT(STR(?this), '#MF_03118a74')) AS ?annotation74) . BIND(?this AS ?pfs73) . } OPTIONAL { ?this up:sequence ?thisSequence . ?thisSequence rdf:value ?thisSequenceValue . ?templateMotifMatch228 faldo:location ?templateMotifSequenceMatchRegionQ9FN41229 ; edam:is_output_of ?templateMotifSequenceProfileAlignmentOperationQ9FN41231 ; rdf:type edam:data_0869 ; rdf:value ?templateMotifCigarQ9FN41MF_03118224 . ?templateMotifSequenceMatchRegionQ9FN41229 faldo:begin ?templateMotifSequenceMatchBeginQ9FN41230 . ?templateMotifSequenceMatchBeginQ9FN41230 faldo:position ?templateMotifSequenceMatchBeginPositionQ9FN41225 ; faldo:reference isoform:Q9FN41-1 . ?templateMotifSequenceProfileAlignmentOperationQ9FN41231 edam:has_input signature:MF_03118 ; rdf:type edam:operation_0300 . ?targetMotifMatch232 faldo:location ?targetMotifMatchRegionMatch233 ; edam:is_output_of ?targetMotifSequenceAlignmentOperationMF_03118235 ; rdf:type edam:data_0869 ; rdf:value ?targetMotifMatchCigarQ9FN41MF_03118226 . ?targetMotifMatchRegionMatch233 faldo:begin ?targetMotifMatchRegionMatchBeginMF_03118234 . ?targetMotifMatchRegionMatchBeginMF_03118234 faldo:position ?targetMotifMatchRegionMatchBeginPositionMF_03118227 ; faldo:reference ?thisSequence . ?targetMotifSequenceAlignmentOperationMF_03118235 edam:has_input signature:MF_03118 ; rdf:type edam:operation_0300 . BIND(STRLEN(REPLACE(SUBSTR(?templateMotifCigarQ9FN41MF_03118224, 1, (STRLEN(?templateMotifCigarQ9FN41MF_03118224) - STRLEN(REPLACE(?templateMotifCigarQ9FN41MF_03118224, CONCAT('^(?:-*[^-]){', STR(((109 - ?templateMotifSequenceMatchBeginPositionQ9FN41225) + 1)), '}'), '')))), '[a-z]', '')) AS ?step1236) . BIND((STRLEN(SUBSTR(?targetMotifMatchCigarQ9FN41MF_03118226, 1, (STRLEN(?targetMotifMatchCigarQ9FN41MF_03118226) - STRLEN(REPLACE(?targetMotifMatchCigarQ9FN41MF_03118226, CONCAT('^(?:[a-z]*(?:[A-Z]|-)){', STR(?step1236), '}'), ''))))) - STRLEN(REPLACE(SUBSTR(?targetMotifMatchCigarQ9FN41MF_03118226, 1, (STRLEN(?targetMotifMatchCigarQ9FN41MF_03118226) - STRLEN(REPLACE(?targetMotifMatchCigarQ9FN41MF_03118226, CONCAT('^(?:[a-z]*(?:[A-Z]|-)){', STR(?step1236), '}'), '')))), '[^-]', ''))) AS ?step2237) . BIND(((?step2237 + ?targetMotifMatchRegionMatchBeginPositionMF_03118227) - 1) AS ?thisPositionOn86) . BIND(?thisPositionOn86 AS ?thisPositionOn87) . BIND(?this AS ?pfs2t238) . BIND(URI(CONCAT(STR(?thisSequence), '#position', STR(?thisPositionOn86))) AS ?pfsb82) . BIND(URI(CONCAT(STR(?thisSequence), '#position', STR(?thisPositionOn87))) AS ?pfse83) . FILTER ((SUBSTR(?thisSequenceValue, ?thisPositionOn86, 1) = 'C')) . BIND(URI(CONCAT(STR(?this), '#MF_03118a81')) AS ?annotation81) . BIND(?this AS ?pfs80) . } OPTIONAL { ?this up:sequence ?thisSequence . ?thisSequence rdf:value ?thisSequenceValue . ?templateMotifMatch243 faldo:location ?templateMotifSequenceMatchRegionQ9FN41244 ; edam:is_output_of ?templateMotifSequenceProfileAlignmentOperationQ9FN41246 ; rdf:type edam:data_0869 ; rdf:value ?templateMotifCigarQ9FN41MF_03118239 . ?templateMotifSequenceMatchRegionQ9FN41244 faldo:begin ?templateMotifSequenceMatchBeginQ9FN41245 . ?templateMotifSequenceMatchBeginQ9FN41245 faldo:position ?templateMotifSequenceMatchBeginPositionQ9FN41240 ; faldo:reference isoform:Q9FN41-1 . ?templateMotifSequenceProfileAlignmentOperationQ9FN41246 edam:has_input signature:MF_03118 ; rdf:type edam:operation_0300 . ?targetMotifMatch247 faldo:location ?targetMotifMatchRegionMatch248 ; edam:is_output_of ?targetMotifSequenceAlignmentOperationMF_03118250 ; rdf:type edam:data_0869 ; rdf:value ?targetMotifMatchCigarQ9FN41MF_03118241 . ?targetMotifMatchRegionMatch248 faldo:begin ?targetMotifMatchRegionMatchBeginMF_03118249 . ?targetMotifMatchRegionMatchBeginMF_03118249 faldo:position ?targetMotifMatchRegionMatchBeginPositionMF_03118242 ; faldo:reference ?thisSequence . ?targetMotifSequenceAlignmentOperationMF_03118250 edam:has_input signature:MF_03118 ; rdf:type edam:operation_0300 . BIND(STRLEN(REPLACE(SUBSTR(?templateMotifCigarQ9FN41MF_03118239, 1, (STRLEN(?templateMotifCigarQ9FN41MF_03118239) - STRLEN(REPLACE(?templateMotifCigarQ9FN41MF_03118239, CONCAT('^(?:-*[^-]){', STR(((440 - ?templateMotifSequenceMatchBeginPositionQ9FN41240) + 1)), '}'), '')))), '[a-z]', '')) AS ?step1251) . BIND((STRLEN(SUBSTR(?targetMotifMatchCigarQ9FN41MF_03118241, 1, (STRLEN(?targetMotifMatchCigarQ9FN41MF_03118241) - STRLEN(REPLACE(?targetMotifMatchCigarQ9FN41MF_03118241, CONCAT('^(?:[a-z]*(?:[A-Z]|-)){', STR(?step1251), '}'), ''))))) - STRLEN(REPLACE(SUBSTR(?targetMotifMatchCigarQ9FN41MF_03118241, 1, (STRLEN(?targetMotifMatchCigarQ9FN41MF_03118241) - STRLEN(REPLACE(?targetMotifMatchCigarQ9FN41MF_03118241, CONCAT('^(?:[a-z]*(?:[A-Z]|-)){', STR(?step1251), '}'), '')))), '[^-]', ''))) AS ?step2252) . BIND(((?step2252 + ?targetMotifMatchRegionMatchBeginPositionMF_03118242) - 1) AS ?thisPositionOn94) . BIND(?thisPositionOn94 AS ?thisPositionOn95) . BIND(?this AS ?pfs2t253) . BIND(URI(CONCAT(STR(?thisSequence), '#position', STR(?thisPositionOn94))) AS ?pfsb90) . BIND(URI(CONCAT(STR(?thisSequence), '#position', STR(?thisPositionOn95))) AS ?pfse91) . FILTER ((SUBSTR(?thisSequenceValue, ?thisPositionOn94, 1) = 'K')) . BIND(URI(CONCAT(STR(?this), '#MF_03118a89')) AS ?annotation89) . BIND(?this AS ?pfs88) . } OPTIONAL { ?this a up:Protein . BIND(?this AS ?caseWithTag254) . } BIND(IF(BOUND(?tagFTGRP_1), ?caseWithTag254, ?UNBOUND_VARIABLE) AS ?case13) . }