CONSTRUCT { _:841819 up:source unirule:MF_03160 . _:841820 up:source unirule:MF_03160 . _:841821 up:source unirule:MF_03160 . _:841822 up:source unirule:MF_03160 . _:841823 up:source unirule:MF_03160 . _:841824 up:source unirule:MF_03160 . _:841825 up:source unirule:MF_03160 . _:841826 up:source unirule:MF_03160 . _:841827 up:source unirule:MF_03160 . _:841828 up:source unirule:MF_03160 . _:841829 up:source unirule:MF_03160 . _:841830 up:source unirule:MF_03160 . _:841831 up:source unirule:MF_03160 . _:841832 up:source unirule:MF_03160 . _:841833 up:source unirule:MF_03160 . _:841834 up:source unirule:MF_03160 . _:841835 up:source unirule:MF_03160 . _:841836 up:source unirule:MF_03160 . _:841837 up:source unirule:MF_03160 . _:841838 up:source unirule:MF_03160 . _:841839 up:source unirule:MF_03160 . _:841840 up:source unirule:MF_03160 . _:841841 up:source unirule:MF_03160 . _:841842 up:source unirule:MF_03160 . _:841843 up:source unirule:MF_03160 . _:841844 up:source unirule:MF_03160 . _:841845 up:source unirule:MF_03160 . _:841846 up:source unirule:MF_03160 . _:841847 up:source unirule:MF_03160 . _:841848 up:source unirule:MF_03160 . _:841849 up:source unirule:MF_03160 . _:841850 up:source unirule:MF_03160 . _:841851 up:source unirule:MF_03160 . _:841852 up:source unirule:MF_03160 . _:841853 up:source unirule:MF_03160 . _:841854 up:source unirule:MF_03160 . ?this up:annotation ?annotation0 ; up:classifiedWith GO:0005739 , GO:0006476 , GO:0034979 , GO:0036054 , GO:0036055 , GO:0070403 , keyword:496 , keyword:520 , keyword:808 . ?annotation0 a up:Similarity_Annotation ; rdfs:comment 'Belongs to the sirtuin family. Class III subfamily.' . ?case1 up:classifiedWith GO:0008270 , keyword:479 , keyword:862 . ?case4 up:alternativeName ?name6 , ?name7 ; up:classifiedWith keyword:539 , keyword:809 , keyword:963 ; up:precursor "true"^^xsd:boolean ; up:recommendedName ?name5 . ?name5 up:ecName '2.3.1.-' ; up:fullName 'NAD-dependent protein deacylase sirtuin-5, mitochondrial' ; rdf:type up:Structured_Name . ?name6 up:fullName 'Regulatory protein SIR2 homolog 5' ; rdf:type up:Structured_Name . ?name7 up:fullName 'SIR2-like protein 5' ; rdf:type up:Structured_Name . ?case8 up:alternativeName ?name10 ; up:recommendedName ?name9 . ?name9 up:ecName '2.3.1.-' ; up:fullName 'NAD-dependent protein deacylase' ; rdf:type up:Structured_Name . ?name10 up:fullName 'Regulatory protein SIR2 homolog 5' ; rdf:type up:Structured_Name . ?pfs13 up:annotation ?annotation14 , ?annotation20 . ?annotation14 faldo:begin ?pfsb15 ; faldo:end ?pfse16 ; up:ligand ?ligand17 ; rdf:type up:Binding_Site_Annotation . ?pfsb15 faldo:position ?thisPositionOn18 ; rdf:type faldo:ExactPosition . ?pfse16 faldo:position ?thisPositionOn19 ; rdf:type faldo:ExactPosition . ?ligand17 rdfs:subClassOf chebi:29105 . ?annotation20 faldo:begin ?pfsb21 ; faldo:end ?pfse22 ; up:ligand ?ligand23 ; rdf:type up:Binding_Site_Annotation . ?pfsb21 faldo:position ?thisPositionOn24 ; rdf:type faldo:ExactPosition . ?pfse22 faldo:position ?thisPositionOn25 ; rdf:type faldo:ExactPosition . ?ligand23 rdfs:subClassOf chebi:29105 . ?pfs26 up:annotation ?annotation27 , ?annotation34 . ?annotation27 faldo:begin ?pfsb28 ; faldo:end ?pfse29 ; up:ligand ?ligand30 ; rdf:type up:Binding_Site_Annotation . ?pfsb28 faldo:position ?thisPositionOn32 ; rdf:type faldo:ExactPosition . ?pfse29 faldo:position ?thisPositionOn33 ; rdf:type faldo:ExactPosition . ?ligand30 rdfs:subClassOf ?molecule31 . ?molecule31 rdfs:label 'substrate' . ?annotation34 faldo:begin ?pfsb35 ; faldo:end ?pfse36 ; up:ligand ?ligand37 ; rdf:type up:Binding_Site_Annotation . ?pfsb35 faldo:position ?thisPositionOn39 ; rdf:type faldo:ExactPosition . ?pfse36 faldo:position ?thisPositionOn40 ; rdf:type faldo:ExactPosition . ?ligand37 rdfs:subClassOf ?molecule38 . ?molecule38 rdfs:label 'substrate' . ?pfs41 up:annotation ?annotation42 . ?annotation42 faldo:begin ?pfsb43 ; faldo:end ?pfse44 ; up:ligand ?ligand45 ; rdf:type up:Binding_Site_Annotation . ?pfsb43 faldo:position ?thisPositionOn46 ; rdf:type faldo:ExactPosition . ?pfse44 faldo:position ?thisPositionOn47 ; rdf:type faldo:ExactPosition . ?ligand45 rdfs:subClassOf chebi:57540 . ?pfs48 up:annotation ?annotation49 . ?annotation49 faldo:begin ?pfsb50 ; faldo:end ?pfse51 ; up:ligand ?ligand52 ; rdf:type up:Binding_Site_Annotation . ?pfsb50 faldo:position ?thisPositionOn53 ; rdf:type faldo:ExactPosition . ?pfse51 faldo:position ?thisPositionOn54 ; rdf:type faldo:ExactPosition . ?ligand52 rdfs:subClassOf chebi:57540 . ?pfs55 up:annotation ?annotation56 . ?annotation56 faldo:begin ?pfsb57 ; faldo:end ?pfse58 ; up:ligand ?ligand59 ; rdf:type up:Binding_Site_Annotation . ?pfsb57 faldo:position ?thisPositionOn60 ; rdf:type faldo:ExactPosition . ?pfse58 faldo:position ?thisPositionOn61 ; rdf:type faldo:ExactPosition . ?ligand59 rdfs:subClassOf chebi:57540 . ?pfs62 up:annotation ?annotation63 . ?annotation63 faldo:begin ?pfsb64 ; faldo:end ?pfse65 ; up:ligand ?ligand66 ; rdf:type up:Binding_Site_Annotation . ?pfsb64 faldo:position ?thisPositionOn67 ; rdf:type faldo:ExactPosition . ?pfse65 faldo:position ?thisPositionOn68 ; rdf:type faldo:ExactPosition . ?ligand66 rdfs:subClassOf chebi:57540 . ?pfs69 up:annotation ?annotation70 . ?annotation70 faldo:begin ?pfsb71 ; faldo:end ?pfse72 ; up:ligand ?ligand73 ; rdf:type up:Binding_Site_Annotation . ?pfsb71 faldo:position ?thisPositionOn74 ; rdf:type faldo:ExactPosition . ?pfse72 faldo:position ?thisPositionOn75 ; rdf:type faldo:ExactPosition . ?ligand73 rdfs:subClassOf chebi:57540 . ?pfs76 up:annotation ?annotation77 . ?annotation77 faldo:begin ?pfsb78 ; faldo:end ?pfse79 ; rdf:type up:Active_Site_Annotation ; rdfs:comment 'Proton acceptor' . ?pfsb78 faldo:position ?thisPositionOn80 ; rdf:type faldo:ExactPosition . ?pfse79 faldo:position ?thisPositionOn81 ; rdf:type faldo:ExactPosition . ?pfs82 up:annotation ?annotation83 , ?annotation89 . ?annotation83 faldo:begin ?pfsb84 ; faldo:end ?pfse85 ; up:ligand ?ligand86 ; rdf:type up:Binding_Site_Annotation . ?pfsb84 faldo:position ?thisPositionOn87 ; rdf:type faldo:ExactPosition . ?pfse85 faldo:position ?thisPositionOn88 ; rdf:type faldo:ExactPosition . ?ligand86 rdfs:subClassOf chebi:29105 . ?annotation89 faldo:begin ?pfsb90 ; faldo:end ?pfse91 ; up:ligand ?ligand92 ; rdf:type up:Binding_Site_Annotation . ?pfsb90 faldo:position ?thisPositionOn93 ; rdf:type faldo:ExactPosition . ?pfse91 faldo:position ?thisPositionOn94 ; rdf:type faldo:ExactPosition . ?ligand92 rdfs:subClassOf chebi:29105 . ?pfs95 up:annotation ?annotation96 . ?annotation96 faldo:begin ?pfsb97 ; faldo:end ?pfse98 ; rdf:type up:Transit_Peptide_Annotation ; rdfs:comment 'Mitochondrion' . ?pfsb97 faldo:position ?thisPositionOn99 ; rdf:type faldo:ExactPosition . ?pfse98 faldo:position ?thisPositionOn100 ; rdf:type faldo:ExactPosition . ?pfs101 up:annotation ?annotation102 . ?annotation102 faldo:begin ?pfsb103 ; faldo:end ?pfse104 ; rdf:type up:Chain_Annotation ; rdfs:comment '@PROTEIN_NAME@' . ?pfsb103 faldo:position ?thisPositionOn105 ; rdf:type faldo:ExactPosition . ?pfse104 faldo:position ?thisPositionOn106 ; rdf:type faldo:ExactPosition . _:841855 a rdf:Statement ; up:attribution _:841819 ; rdf:subject ?this ; rdf:predicate up:annotation ; rdf:object ?annotation0 . _:841856 a rdf:Statement ; up:attribution _:841820 ; rdf:subject ?this ; rdf:predicate up:classifiedWith ; rdf:object keyword:808 . _:841857 a rdf:Statement ; up:attribution _:841821 ; rdf:subject ?this ; rdf:predicate up:classifiedWith ; rdf:object keyword:496 . _:841858 a rdf:Statement ; up:attribution _:841822 ; rdf:subject ?this ; rdf:predicate up:classifiedWith ; rdf:object keyword:520 . _:841859 a rdf:Statement ; up:attribution _:841823 ; rdf:subject ?this ; rdf:predicate up:classifiedWith ; rdf:object GO:0005739 . _:841860 a rdf:Statement ; up:attribution _:841824 ; rdf:subject ?this ; rdf:predicate up:classifiedWith ; rdf:object GO:0034979 . _:841861 a rdf:Statement ; up:attribution _:841825 ; rdf:subject ?this ; rdf:predicate up:classifiedWith ; rdf:object GO:0070403 . _:841862 a rdf:Statement ; up:attribution _:841826 ; rdf:subject ?this ; rdf:predicate up:classifiedWith ; rdf:object GO:0036054 . _:841863 a rdf:Statement ; up:attribution _:841827 ; rdf:subject ?this ; rdf:predicate up:classifiedWith ; rdf:object GO:0036055 . _:841864 a rdf:Statement ; up:attribution _:841828 ; rdf:subject ?this ; rdf:predicate up:classifiedWith ; rdf:object GO:0006476 . _:841865 a rdf:Statement ; up:attribution _:841829 ; rdf:subject ?case1 ; rdf:predicate up:classifiedWith ; rdf:object keyword:479 . _:841866 a rdf:Statement ; up:attribution _:841830 ; rdf:subject ?case1 ; rdf:predicate up:classifiedWith ; rdf:object keyword:862 . _:841867 a rdf:Statement ; up:attribution _:841831 ; rdf:subject ?case1 ; rdf:predicate up:classifiedWith ; rdf:object GO:0008270 . _:841868 a rdf:Statement ; up:attribution _:841832 ; rdf:subject ?case4 ; rdf:predicate up:recommendedName ; rdf:object ?name5 . _:841869 a rdf:Statement ; up:attribution _:841833 ; rdf:subject ?case4 ; rdf:predicate up:alternativeName ; rdf:object ?name6 . _:841870 a rdf:Statement ; up:attribution _:841834 ; rdf:subject ?case4 ; rdf:predicate up:alternativeName ; rdf:object ?name7 . _:841871 a rdf:Statement ; up:attribution _:841835 ; rdf:subject ?case4 ; rdf:predicate up:precursor ; rdf:object "true"^^xsd:boolean . _:841872 a rdf:Statement ; up:attribution _:841836 ; rdf:subject ?case4 ; rdf:predicate up:classifiedWith ; rdf:object keyword:963 . _:841873 a rdf:Statement ; up:attribution _:841837 ; rdf:subject ?case4 ; rdf:predicate up:classifiedWith ; rdf:object keyword:539 . _:841874 a rdf:Statement ; up:attribution _:841838 ; rdf:subject ?case4 ; rdf:predicate up:classifiedWith ; rdf:object keyword:809 . _:841875 a rdf:Statement ; up:attribution _:841839 ; rdf:subject ?case8 ; rdf:predicate up:recommendedName ; rdf:object ?name9 . _:841876 a rdf:Statement ; up:attribution _:841840 ; rdf:subject ?case8 ; rdf:predicate up:alternativeName ; rdf:object ?name10 . _:841877 a rdf:Statement ; up:source unirule:MF_03160 ; rdf:subject ?pfs13 ; rdf:predicate up:annotation ; rdf:object ?annotation14 . _:841878 a rdf:Statement ; up:attribution _:841841 ; rdf:subject ?pfs13 ; rdf:predicate up:annotation ; rdf:object ?annotation14 . _:841879 a rdf:Statement ; up:source unirule:MF_03160 ; rdf:subject ?pfs13 ; rdf:predicate up:annotation ; rdf:object ?annotation20 . _:841880 a rdf:Statement ; up:attribution _:841842 ; rdf:subject ?pfs13 ; rdf:predicate up:annotation ; rdf:object ?annotation20 . _:841881 a rdf:Statement ; up:source unirule:MF_03160 ; rdf:subject ?pfs26 ; rdf:predicate up:annotation ; rdf:object ?annotation27 . _:841882 a rdf:Statement ; up:attribution _:841843 ; rdf:subject ?pfs26 ; rdf:predicate up:annotation ; rdf:object ?annotation27 . _:841883 a rdf:Statement ; up:source unirule:MF_03160 ; rdf:subject ?pfs26 ; rdf:predicate up:annotation ; rdf:object ?annotation34 . _:841884 a rdf:Statement ; up:attribution _:841844 ; rdf:subject ?pfs26 ; rdf:predicate up:annotation ; rdf:object ?annotation34 . _:841885 a rdf:Statement ; up:source unirule:MF_03160 ; rdf:subject ?pfs41 ; rdf:predicate up:annotation ; rdf:object ?annotation42 . _:841886 a rdf:Statement ; up:attribution _:841845 ; rdf:subject ?pfs41 ; rdf:predicate up:annotation ; rdf:object ?annotation42 . _:841887 a rdf:Statement ; up:source unirule:MF_03160 ; rdf:subject ?pfs48 ; rdf:predicate up:annotation ; rdf:object ?annotation49 . _:841888 a rdf:Statement ; up:attribution _:841846 ; rdf:subject ?pfs48 ; rdf:predicate up:annotation ; rdf:object ?annotation49 . _:841889 a rdf:Statement ; up:source unirule:MF_03160 ; rdf:subject ?pfs55 ; rdf:predicate up:annotation ; rdf:object ?annotation56 . _:841890 a rdf:Statement ; up:attribution _:841847 ; rdf:subject ?pfs55 ; rdf:predicate up:annotation ; rdf:object ?annotation56 . _:841891 a rdf:Statement ; up:source unirule:MF_03160 ; rdf:subject ?pfs62 ; rdf:predicate up:annotation ; rdf:object ?annotation63 . _:841892 a rdf:Statement ; up:attribution _:841848 ; rdf:subject ?pfs62 ; rdf:predicate up:annotation ; rdf:object ?annotation63 . _:841893 a rdf:Statement ; up:source unirule:MF_03160 ; rdf:subject ?pfs69 ; rdf:predicate up:annotation ; rdf:object ?annotation70 . _:841894 a rdf:Statement ; up:attribution _:841849 ; rdf:subject ?pfs69 ; rdf:predicate up:annotation ; rdf:object ?annotation70 . _:841895 a rdf:Statement ; up:source unirule:MF_03160 ; rdf:subject ?pfs76 ; rdf:predicate up:annotation ; rdf:object ?annotation77 . _:841896 a rdf:Statement ; up:attribution _:841850 ; rdf:subject ?pfs76 ; rdf:predicate up:annotation ; rdf:object ?annotation77 . _:841897 a rdf:Statement ; up:source unirule:MF_03160 ; rdf:subject ?pfs82 ; rdf:predicate up:annotation ; rdf:object ?annotation83 . _:841898 a rdf:Statement ; up:attribution _:841851 ; rdf:subject ?pfs82 ; rdf:predicate up:annotation ; rdf:object ?annotation83 . _:841899 a rdf:Statement ; up:source unirule:MF_03160 ; rdf:subject ?pfs82 ; rdf:predicate up:annotation ; rdf:object ?annotation89 . _:841900 a rdf:Statement ; up:attribution _:841852 ; rdf:subject ?pfs82 ; rdf:predicate up:annotation ; rdf:object ?annotation89 . _:841901 a rdf:Statement ; up:source unirule:MF_03160 ; rdf:subject ?pfs95 ; rdf:predicate up:annotation ; rdf:object ?annotation96 . _:841902 a rdf:Statement ; up:attribution _:841853 ; rdf:subject ?pfs95 ; rdf:predicate up:annotation ; rdf:object ?annotation96 . _:841903 a rdf:Statement ; up:source unirule:MF_03160 ; rdf:subject ?pfs101 ; rdf:predicate up:annotation ; rdf:object ?annotation102 . _:841904 a rdf:Statement ; up:attribution _:841854 ; rdf:subject ?pfs101 ; rdf:predicate up:annotation ; rdf:object ?annotation102 . } WHERE { #baseURI: http://purl.uniprot.org/unirule/MF_03160 #Rule MF_03160 Created by:ipedruzz on:2012-04-02 Modified by:ecastro on:2022-11-19 ?this up:organism ?thisOrganism ; rdfs:seeAlso signature:MF_01121 . ?thisOrganism rdfs:subClassOf+ taxon:2759 . BIND(URI(CONCAT(STR(?this), '#MF_03160a0')) AS ?annotation0) . OPTIONAL { ?this up:sequence ?thisSequence . ?thisSequence rdf:value ?thisSequenceValue . ?templateMotifMatch111 faldo:location ?templateMotifSequenceMatchRegionQ9NXA8112 ; edam:is_output_of ?templateMotifSequenceProfileAlignmentOperationQ9NXA8114 ; rdf:type edam:data_0869 ; rdf:value ?templateMotifCigarQ9NXA8MF_01121107 . ?templateMotifSequenceMatchRegionQ9NXA8112 faldo:begin ?templateMotifSequenceMatchBeginQ9NXA8113 . ?templateMotifSequenceMatchBeginQ9NXA8113 faldo:position ?templateMotifSequenceMatchBeginPositionQ9NXA8108 ; faldo:reference isoform:Q9NXA8-1 . ?templateMotifSequenceProfileAlignmentOperationQ9NXA8114 edam:has_input signature:MF_01121 ; rdf:type edam:operation_0300 . ?targetMotifMatch115 faldo:location ?targetMotifMatchRegionMatch116 ; edam:is_output_of ?targetMotifSequenceAlignmentOperationMF_01121118 ; rdf:type edam:data_0869 ; rdf:value ?targetMotifMatchCigarQ9NXA8MF_01121109 . ?targetMotifMatchRegionMatch116 faldo:begin ?targetMotifMatchRegionMatchBeginMF_01121117 . ?targetMotifMatchRegionMatchBeginMF_01121117 faldo:position ?targetMotifMatchRegionMatchBeginPositionMF_01121110 ; faldo:reference ?thisSequence . ?targetMotifSequenceAlignmentOperationMF_01121118 edam:has_input signature:MF_01121 ; rdf:type edam:operation_0300 . BIND(?this AS ?tagFTGRP_1) . BIND(STRLEN(REPLACE(SUBSTR(?templateMotifCigarQ9NXA8MF_01121107, 1, (STRLEN(?templateMotifCigarQ9NXA8MF_01121107) - STRLEN(REPLACE(?templateMotifCigarQ9NXA8MF_01121107, CONCAT('^(?:-*[^-]){', STR(((166 - ?templateMotifSequenceMatchBeginPositionQ9NXA8108) + 1)), '}'), '')))), '[a-z]', '')) AS ?step1119) . BIND((STRLEN(SUBSTR(?targetMotifMatchCigarQ9NXA8MF_01121109, 1, (STRLEN(?targetMotifMatchCigarQ9NXA8MF_01121109) - STRLEN(REPLACE(?targetMotifMatchCigarQ9NXA8MF_01121109, CONCAT('^(?:[a-z]*(?:[A-Z]|-)){', STR(?step1119), '}'), ''))))) - STRLEN(REPLACE(SUBSTR(?targetMotifMatchCigarQ9NXA8MF_01121109, 1, (STRLEN(?targetMotifMatchCigarQ9NXA8MF_01121109) - STRLEN(REPLACE(?targetMotifMatchCigarQ9NXA8MF_01121109, CONCAT('^(?:[a-z]*(?:[A-Z]|-)){', STR(?step1119), '}'), '')))), '[^-]', ''))) AS ?step2120) . BIND(((?step2120 + ?targetMotifMatchRegionMatchBeginPositionMF_01121110) - 1) AS ?thisPositionOn18) . BIND(?thisPositionOn18 AS ?thisPositionOn19) . BIND(?this AS ?pfs1t121) . BIND(URI(CONCAT(STR(?thisSequence), '#position', STR(?thisPositionOn18))) AS ?pfsb15) . BIND(URI(CONCAT(STR(?thisSequence), '#position', STR(?thisPositionOn19))) AS ?pfse16) . FILTER ((SUBSTR(?thisSequenceValue, ?thisPositionOn18, 1) = 'C')) . BIND(STRLEN(REPLACE(SUBSTR(?templateMotifCigarQ9NXA8MF_01121107, 1, (STRLEN(?templateMotifCigarQ9NXA8MF_01121107) - STRLEN(REPLACE(?templateMotifCigarQ9NXA8MF_01121107, CONCAT('^(?:-*[^-]){', STR(((207 - ?templateMotifSequenceMatchBeginPositionQ9NXA8108) + 1)), '}'), '')))), '[a-z]', '')) AS ?step1122) . BIND((STRLEN(SUBSTR(?targetMotifMatchCigarQ9NXA8MF_01121109, 1, (STRLEN(?targetMotifMatchCigarQ9NXA8MF_01121109) - STRLEN(REPLACE(?targetMotifMatchCigarQ9NXA8MF_01121109, CONCAT('^(?:[a-z]*(?:[A-Z]|-)){', STR(?step1122), '}'), ''))))) - STRLEN(REPLACE(SUBSTR(?targetMotifMatchCigarQ9NXA8MF_01121109, 1, (STRLEN(?targetMotifMatchCigarQ9NXA8MF_01121109) - STRLEN(REPLACE(?targetMotifMatchCigarQ9NXA8MF_01121109, CONCAT('^(?:[a-z]*(?:[A-Z]|-)){', STR(?step1122), '}'), '')))), '[^-]', ''))) AS ?step2123) . BIND(((?step2123 + ?targetMotifMatchRegionMatchBeginPositionMF_01121110) - 1) AS ?thisPositionOn24) . BIND(?thisPositionOn24 AS ?thisPositionOn25) . BIND(?this AS ?pfs1t124) . BIND(URI(CONCAT(STR(?thisSequence), '#position', STR(?thisPositionOn24))) AS ?pfsb21) . BIND(URI(CONCAT(STR(?thisSequence), '#position', STR(?thisPositionOn25))) AS ?pfse22) . FILTER ((SUBSTR(?thisSequenceValue, ?thisPositionOn24, 1) = 'C')) . BIND(?this AS ?pfs13) . } OPTIONAL { ?this up:sequence ?thisSequence . ?thisSequence rdf:value ?thisSequenceValue . ?templateMotifMatch129 faldo:location ?templateMotifSequenceMatchRegionQ9NXA8130 ; edam:is_output_of ?templateMotifSequenceProfileAlignmentOperationQ9NXA8132 ; rdf:type edam:data_0869 ; rdf:value ?templateMotifCigarQ9NXA8MF_01121125 . ?templateMotifSequenceMatchRegionQ9NXA8130 faldo:begin ?templateMotifSequenceMatchBeginQ9NXA8131 . ?templateMotifSequenceMatchBeginQ9NXA8131 faldo:position ?templateMotifSequenceMatchBeginPositionQ9NXA8126 ; faldo:reference isoform:Q9NXA8-1 . ?templateMotifSequenceProfileAlignmentOperationQ9NXA8132 edam:has_input signature:MF_01121 ; rdf:type edam:operation_0300 . ?targetMotifMatch133 faldo:location ?targetMotifMatchRegionMatch134 ; edam:is_output_of ?targetMotifSequenceAlignmentOperationMF_01121136 ; rdf:type edam:data_0869 ; rdf:value ?targetMotifMatchCigarQ9NXA8MF_01121127 . ?targetMotifMatchRegionMatch134 faldo:begin ?targetMotifMatchRegionMatchBeginMF_01121135 . ?targetMotifMatchRegionMatchBeginMF_01121135 faldo:position ?targetMotifMatchRegionMatchBeginPositionMF_01121128 ; faldo:reference ?thisSequence . ?targetMotifSequenceAlignmentOperationMF_01121136 edam:has_input signature:MF_01121 ; rdf:type edam:operation_0300 . BIND(?this AS ?tagFTGRP_3) . BIND(STRLEN(REPLACE(SUBSTR(?templateMotifCigarQ9NXA8MF_01121125, 1, (STRLEN(?templateMotifCigarQ9NXA8MF_01121125) - STRLEN(REPLACE(?templateMotifCigarQ9NXA8MF_01121125, CONCAT('^(?:-*[^-]){', STR(((102 - ?templateMotifSequenceMatchBeginPositionQ9NXA8126) + 1)), '}'), '')))), '[a-z]', '')) AS ?step1137) . BIND((STRLEN(SUBSTR(?targetMotifMatchCigarQ9NXA8MF_01121127, 1, (STRLEN(?targetMotifMatchCigarQ9NXA8MF_01121127) - STRLEN(REPLACE(?targetMotifMatchCigarQ9NXA8MF_01121127, CONCAT('^(?:[a-z]*(?:[A-Z]|-)){', STR(?step1137), '}'), ''))))) - STRLEN(REPLACE(SUBSTR(?targetMotifMatchCigarQ9NXA8MF_01121127, 1, (STRLEN(?targetMotifMatchCigarQ9NXA8MF_01121127) - STRLEN(REPLACE(?targetMotifMatchCigarQ9NXA8MF_01121127, CONCAT('^(?:[a-z]*(?:[A-Z]|-)){', STR(?step1137), '}'), '')))), '[^-]', ''))) AS ?step2138) . BIND(((?step2138 + ?targetMotifMatchRegionMatchBeginPositionMF_01121128) - 1) AS ?thisPositionOn32) . BIND(?thisPositionOn32 AS ?thisPositionOn33) . BIND(?this AS ?pfs2t139) . BIND(URI(CONCAT(STR(?thisSequence), '#position', STR(?thisPositionOn32))) AS ?pfsb28) . BIND(URI(CONCAT(STR(?thisSequence), '#position', STR(?thisPositionOn33))) AS ?pfse29) . FILTER ((SUBSTR(?thisSequenceValue, ?thisPositionOn32, 1) = 'Y')) . BIND(STRLEN(REPLACE(SUBSTR(?templateMotifCigarQ9NXA8MF_01121125, 1, (STRLEN(?templateMotifCigarQ9NXA8MF_01121125) - STRLEN(REPLACE(?templateMotifCigarQ9NXA8MF_01121125, CONCAT('^(?:-*[^-]){', STR(((105 - ?templateMotifSequenceMatchBeginPositionQ9NXA8126) + 1)), '}'), '')))), '[a-z]', '')) AS ?step1140) . BIND((STRLEN(SUBSTR(?targetMotifMatchCigarQ9NXA8MF_01121127, 1, (STRLEN(?targetMotifMatchCigarQ9NXA8MF_01121127) - STRLEN(REPLACE(?targetMotifMatchCigarQ9NXA8MF_01121127, CONCAT('^(?:[a-z]*(?:[A-Z]|-)){', STR(?step1140), '}'), ''))))) - STRLEN(REPLACE(SUBSTR(?targetMotifMatchCigarQ9NXA8MF_01121127, 1, (STRLEN(?targetMotifMatchCigarQ9NXA8MF_01121127) - STRLEN(REPLACE(?targetMotifMatchCigarQ9NXA8MF_01121127, CONCAT('^(?:[a-z]*(?:[A-Z]|-)){', STR(?step1140), '}'), '')))), '[^-]', ''))) AS ?step2141) . BIND(((?step2141 + ?targetMotifMatchRegionMatchBeginPositionMF_01121128) - 1) AS ?thisPositionOn39) . BIND(?thisPositionOn39 AS ?thisPositionOn40) . BIND(?this AS ?pfs2t142) . BIND(URI(CONCAT(STR(?thisSequence), '#position', STR(?thisPositionOn39))) AS ?pfsb35) . BIND(URI(CONCAT(STR(?thisSequence), '#position', STR(?thisPositionOn40))) AS ?pfse36) . FILTER ((SUBSTR(?thisSequenceValue, ?thisPositionOn39, 1) = 'R')) . BIND(?this AS ?pfs26) . } OPTIONAL { ?this up:sequence ?thisSequence . ?thisSequence rdf:value ?thisSequenceValue . ?templateMotifMatch147 faldo:location ?templateMotifSequenceMatchRegionQ9NXA8148 ; edam:is_output_of ?templateMotifSequenceProfileAlignmentOperationQ9NXA8150 ; rdf:type edam:data_0869 ; rdf:value ?templateMotifCigarQ9NXA8MF_01121143 . ?templateMotifSequenceMatchRegionQ9NXA8148 faldo:begin ?templateMotifSequenceMatchBeginQ9NXA8149 . ?templateMotifSequenceMatchBeginQ9NXA8149 faldo:position ?templateMotifSequenceMatchBeginPositionQ9NXA8144 ; faldo:reference isoform:Q9NXA8-1 . ?templateMotifSequenceProfileAlignmentOperationQ9NXA8150 edam:has_input signature:MF_01121 ; rdf:type edam:operation_0300 . ?targetMotifMatch151 faldo:location ?targetMotifMatchRegionMatch152 ; edam:is_output_of ?targetMotifSequenceAlignmentOperationMF_01121154 ; rdf:type edam:data_0869 ; rdf:value ?targetMotifMatchCigarQ9NXA8MF_01121145 . ?targetMotifMatchRegionMatch152 faldo:begin ?targetMotifMatchRegionMatchBeginMF_01121153 . ?targetMotifMatchRegionMatchBeginMF_01121153 faldo:position ?targetMotifMatchRegionMatchBeginPositionMF_01121146 ; faldo:reference ?thisSequence . ?targetMotifSequenceAlignmentOperationMF_01121154 edam:has_input signature:MF_01121 ; rdf:type edam:operation_0300 . BIND(STRLEN(REPLACE(SUBSTR(?templateMotifCigarQ9NXA8MF_01121143, 1, (STRLEN(?templateMotifCigarQ9NXA8MF_01121143) - STRLEN(REPLACE(?templateMotifCigarQ9NXA8MF_01121143, CONCAT('^(?:-*[^-]){', STR(((293 - ?templateMotifSequenceMatchBeginPositionQ9NXA8144) + 1)), '}'), '')))), '[a-z]', '')) AS ?step1155) . BIND((STRLEN(SUBSTR(?targetMotifMatchCigarQ9NXA8MF_01121145, 1, (STRLEN(?targetMotifMatchCigarQ9NXA8MF_01121145) - STRLEN(REPLACE(?targetMotifMatchCigarQ9NXA8MF_01121145, CONCAT('^(?:[a-z]*(?:[A-Z]|-)){', STR(?step1155), '}'), ''))))) - STRLEN(REPLACE(SUBSTR(?targetMotifMatchCigarQ9NXA8MF_01121145, 1, (STRLEN(?targetMotifMatchCigarQ9NXA8MF_01121145) - STRLEN(REPLACE(?targetMotifMatchCigarQ9NXA8MF_01121145, CONCAT('^(?:[a-z]*(?:[A-Z]|-)){', STR(?step1155), '}'), '')))), '[^-]', ''))) AS ?step2156) . BIND(((?step2156 + ?targetMotifMatchRegionMatchBeginPositionMF_01121146) - 1) AS ?thisPositionOn46) . BIND(?thisPositionOn46 AS ?thisPositionOn47) . BIND(?this AS ?pfs3t157) . BIND(URI(CONCAT(STR(?thisSequence), '#position', STR(?thisPositionOn46))) AS ?pfsb43) . BIND(URI(CONCAT(STR(?thisSequence), '#position', STR(?thisPositionOn47))) AS ?pfse44) . FILTER (BOUND(?thisPositionOn46)) . BIND(URI(CONCAT(STR(?this), '#MF_03160a42')) AS ?annotation42) . BIND(?this AS ?pfs41) . } OPTIONAL { ?this up:sequence ?thisSequence . ?thisSequence rdf:value ?thisSequenceValue . ?templateMotifMatch162 faldo:location ?templateMotifSequenceMatchRegionQ9NXA8163 ; edam:is_output_of ?templateMotifSequenceProfileAlignmentOperationQ9NXA8165 ; rdf:type edam:data_0869 ; rdf:value ?templateMotifCigarQ9NXA8MF_01121158 . ?templateMotifSequenceMatchRegionQ9NXA8163 faldo:begin ?templateMotifSequenceMatchBeginQ9NXA8164 . ?templateMotifSequenceMatchBeginQ9NXA8164 faldo:position ?templateMotifSequenceMatchBeginPositionQ9NXA8159 ; faldo:reference isoform:Q9NXA8-1 . ?templateMotifSequenceProfileAlignmentOperationQ9NXA8165 edam:has_input signature:MF_01121 ; rdf:type edam:operation_0300 . ?targetMotifMatch166 faldo:location ?targetMotifMatchRegionMatch167 ; edam:is_output_of ?targetMotifSequenceAlignmentOperationMF_01121169 ; rdf:type edam:data_0869 ; rdf:value ?targetMotifMatchCigarQ9NXA8MF_01121160 . ?targetMotifMatchRegionMatch167 faldo:begin ?targetMotifMatchRegionMatchBeginMF_01121168 . ?targetMotifMatchRegionMatchBeginMF_01121168 faldo:position ?targetMotifMatchRegionMatchBeginPositionMF_01121161 ; faldo:reference ?thisSequence . ?targetMotifSequenceAlignmentOperationMF_01121169 edam:has_input signature:MF_01121 ; rdf:type edam:operation_0300 . BIND(STRLEN(REPLACE(SUBSTR(?templateMotifCigarQ9NXA8MF_01121158, 1, (STRLEN(?templateMotifCigarQ9NXA8MF_01121158) - STRLEN(REPLACE(?templateMotifCigarQ9NXA8MF_01121158, CONCAT('^(?:-*[^-]){', STR(((58 - ?templateMotifSequenceMatchBeginPositionQ9NXA8159) + 1)), '}'), '')))), '[a-z]', '')) AS ?step1170) . BIND((STRLEN(SUBSTR(?targetMotifMatchCigarQ9NXA8MF_01121160, 1, (STRLEN(?targetMotifMatchCigarQ9NXA8MF_01121160) - STRLEN(REPLACE(?targetMotifMatchCigarQ9NXA8MF_01121160, CONCAT('^(?:[a-z]*(?:[A-Z]|-)){', STR(?step1170), '}'), ''))))) - STRLEN(REPLACE(SUBSTR(?targetMotifMatchCigarQ9NXA8MF_01121160, 1, (STRLEN(?targetMotifMatchCigarQ9NXA8MF_01121160) - STRLEN(REPLACE(?targetMotifMatchCigarQ9NXA8MF_01121160, CONCAT('^(?:[a-z]*(?:[A-Z]|-)){', STR(?step1170), '}'), '')))), '[^-]', ''))) AS ?step2171) . BIND(((?step2171 + ?targetMotifMatchRegionMatchBeginPositionMF_01121161) - 1) AS ?thisPositionOn53) . BIND(STRLEN(REPLACE(SUBSTR(?templateMotifCigarQ9NXA8MF_01121158, 1, (STRLEN(?templateMotifCigarQ9NXA8MF_01121158) - STRLEN(REPLACE(?templateMotifCigarQ9NXA8MF_01121158, CONCAT('^(?:-*[^-]){', STR(((77 - ?templateMotifSequenceMatchBeginPositionQ9NXA8159) + 1)), '}'), '')))), '[a-z]', '')) AS ?step1172) . BIND((STRLEN(SUBSTR(?targetMotifMatchCigarQ9NXA8MF_01121160, 1, (STRLEN(?targetMotifMatchCigarQ9NXA8MF_01121160) - STRLEN(REPLACE(?targetMotifMatchCigarQ9NXA8MF_01121160, CONCAT('^(?:[a-z]*(?:[A-Z]|-)){', STR(?step1172), '}'), ''))))) - STRLEN(REPLACE(SUBSTR(?targetMotifMatchCigarQ9NXA8MF_01121160, 1, (STRLEN(?targetMotifMatchCigarQ9NXA8MF_01121160) - STRLEN(REPLACE(?targetMotifMatchCigarQ9NXA8MF_01121160, CONCAT('^(?:[a-z]*(?:[A-Z]|-)){', STR(?step1172), '}'), '')))), '[^-]', ''))) AS ?step2173) . BIND(((?step2173 + ?targetMotifMatchRegionMatchBeginPositionMF_01121161) - 1) AS ?thisPositionOn54) . BIND(?this AS ?pfs3t174) . BIND(URI(CONCAT(STR(?thisSequence), '#position', STR(?thisPositionOn53))) AS ?pfsb50) . BIND(URI(CONCAT(STR(?thisSequence), '#position', STR(?thisPositionOn54))) AS ?pfse51) . FILTER (REGEX('GAG[ARNDCQEGHILKMFPSTWYVBZJUOX]S[AK][ARNDCQEGHILKMFPSTWYVBZJUOX]SG[ILV][ARNDCQEGHILKMFPSTWYVBZJUOX]T[ARNDCQEGHILKMFPSTWYVBZJUOX]{7,8)W', SUBSTR(?thisSequenceValue, ?thisPositionOn53, (?thisPositionOn54 - ?thisPositionOn53)))) . BIND(URI(CONCAT(STR(?this), '#MF_03160a49')) AS ?annotation49) . BIND(?this AS ?pfs48) . } OPTIONAL { ?this up:sequence ?thisSequence . ?thisSequence rdf:value ?thisSequenceValue . ?templateMotifMatch179 faldo:location ?templateMotifSequenceMatchRegionQ9NXA8180 ; edam:is_output_of ?templateMotifSequenceProfileAlignmentOperationQ9NXA8182 ; rdf:type edam:data_0869 ; rdf:value ?templateMotifCigarQ9NXA8MF_01121175 . ?templateMotifSequenceMatchRegionQ9NXA8180 faldo:begin ?templateMotifSequenceMatchBeginQ9NXA8181 . ?templateMotifSequenceMatchBeginQ9NXA8181 faldo:position ?templateMotifSequenceMatchBeginPositionQ9NXA8176 ; faldo:reference isoform:Q9NXA8-1 . ?templateMotifSequenceProfileAlignmentOperationQ9NXA8182 edam:has_input signature:MF_01121 ; rdf:type edam:operation_0300 . ?targetMotifMatch183 faldo:location ?targetMotifMatchRegionMatch184 ; edam:is_output_of ?targetMotifSequenceAlignmentOperationMF_01121186 ; rdf:type edam:data_0869 ; rdf:value ?targetMotifMatchCigarQ9NXA8MF_01121177 . ?targetMotifMatchRegionMatch184 faldo:begin ?targetMotifMatchRegionMatchBeginMF_01121185 . ?targetMotifMatchRegionMatchBeginMF_01121185 faldo:position ?targetMotifMatchRegionMatchBeginPositionMF_01121178 ; faldo:reference ?thisSequence . ?targetMotifSequenceAlignmentOperationMF_01121186 edam:has_input signature:MF_01121 ; rdf:type edam:operation_0300 . BIND(STRLEN(REPLACE(SUBSTR(?templateMotifCigarQ9NXA8MF_01121175, 1, (STRLEN(?templateMotifCigarQ9NXA8MF_01121175) - STRLEN(REPLACE(?templateMotifCigarQ9NXA8MF_01121175, CONCAT('^(?:-*[^-]){', STR(((140 - ?templateMotifSequenceMatchBeginPositionQ9NXA8176) + 1)), '}'), '')))), '[a-z]', '')) AS ?step1187) . BIND((STRLEN(SUBSTR(?targetMotifMatchCigarQ9NXA8MF_01121177, 1, (STRLEN(?targetMotifMatchCigarQ9NXA8MF_01121177) - STRLEN(REPLACE(?targetMotifMatchCigarQ9NXA8MF_01121177, CONCAT('^(?:[a-z]*(?:[A-Z]|-)){', STR(?step1187), '}'), ''))))) - STRLEN(REPLACE(SUBSTR(?targetMotifMatchCigarQ9NXA8MF_01121177, 1, (STRLEN(?targetMotifMatchCigarQ9NXA8MF_01121177) - STRLEN(REPLACE(?targetMotifMatchCigarQ9NXA8MF_01121177, CONCAT('^(?:[a-z]*(?:[A-Z]|-)){', STR(?step1187), '}'), '')))), '[^-]', ''))) AS ?step2188) . BIND(((?step2188 + ?targetMotifMatchRegionMatchBeginPositionMF_01121178) - 1) AS ?thisPositionOn60) . BIND(STRLEN(REPLACE(SUBSTR(?templateMotifCigarQ9NXA8MF_01121175, 1, (STRLEN(?templateMotifCigarQ9NXA8MF_01121175) - STRLEN(REPLACE(?templateMotifCigarQ9NXA8MF_01121175, CONCAT('^(?:-*[^-]){', STR(((143 - ?templateMotifSequenceMatchBeginPositionQ9NXA8176) + 1)), '}'), '')))), '[a-z]', '')) AS ?step1189) . BIND((STRLEN(SUBSTR(?targetMotifMatchCigarQ9NXA8MF_01121177, 1, (STRLEN(?targetMotifMatchCigarQ9NXA8MF_01121177) - STRLEN(REPLACE(?targetMotifMatchCigarQ9NXA8MF_01121177, CONCAT('^(?:[a-z]*(?:[A-Z]|-)){', STR(?step1189), '}'), ''))))) - STRLEN(REPLACE(SUBSTR(?targetMotifMatchCigarQ9NXA8MF_01121177, 1, (STRLEN(?targetMotifMatchCigarQ9NXA8MF_01121177) - STRLEN(REPLACE(?targetMotifMatchCigarQ9NXA8MF_01121177, CONCAT('^(?:[a-z]*(?:[A-Z]|-)){', STR(?step1189), '}'), '')))), '[^-]', ''))) AS ?step2190) . BIND(((?step2190 + ?targetMotifMatchRegionMatchBeginPositionMF_01121178) - 1) AS ?thisPositionOn61) . BIND(?this AS ?pfs3t191) . BIND(URI(CONCAT(STR(?thisSequence), '#position', STR(?thisPositionOn60))) AS ?pfsb57) . BIND(URI(CONCAT(STR(?thisSequence), '#position', STR(?thisPositionOn61))) AS ?pfse58) . FILTER (REGEX('QN[IV][DE]', SUBSTR(?thisSequenceValue, ?thisPositionOn60, (?thisPositionOn61 - ?thisPositionOn60)))) . BIND(URI(CONCAT(STR(?this), '#MF_03160a56')) AS ?annotation56) . BIND(?this AS ?pfs55) . } OPTIONAL { ?this up:sequence ?thisSequence . ?thisSequence rdf:value ?thisSequenceValue . ?templateMotifMatch196 faldo:location ?templateMotifSequenceMatchRegionQ9NXA8197 ; edam:is_output_of ?templateMotifSequenceProfileAlignmentOperationQ9NXA8199 ; rdf:type edam:data_0869 ; rdf:value ?templateMotifCigarQ9NXA8MF_01121192 . ?templateMotifSequenceMatchRegionQ9NXA8197 faldo:begin ?templateMotifSequenceMatchBeginQ9NXA8198 . ?templateMotifSequenceMatchBeginQ9NXA8198 faldo:position ?templateMotifSequenceMatchBeginPositionQ9NXA8193 ; faldo:reference isoform:Q9NXA8-1 . ?templateMotifSequenceProfileAlignmentOperationQ9NXA8199 edam:has_input signature:MF_01121 ; rdf:type edam:operation_0300 . ?targetMotifMatch200 faldo:location ?targetMotifMatchRegionMatch201 ; edam:is_output_of ?targetMotifSequenceAlignmentOperationMF_01121203 ; rdf:type edam:data_0869 ; rdf:value ?targetMotifMatchCigarQ9NXA8MF_01121194 . ?targetMotifMatchRegionMatch201 faldo:begin ?targetMotifMatchRegionMatchBeginMF_01121202 . ?targetMotifMatchRegionMatchBeginMF_01121202 faldo:position ?targetMotifMatchRegionMatchBeginPositionMF_01121195 ; faldo:reference ?thisSequence . ?targetMotifSequenceAlignmentOperationMF_01121203 edam:has_input signature:MF_01121 ; rdf:type edam:operation_0300 . BIND(STRLEN(REPLACE(SUBSTR(?templateMotifCigarQ9NXA8MF_01121192, 1, (STRLEN(?templateMotifCigarQ9NXA8MF_01121192) - STRLEN(REPLACE(?templateMotifCigarQ9NXA8MF_01121192, CONCAT('^(?:-*[^-]){', STR(((249 - ?templateMotifSequenceMatchBeginPositionQ9NXA8193) + 1)), '}'), '')))), '[a-z]', '')) AS ?step1204) . BIND((STRLEN(SUBSTR(?targetMotifMatchCigarQ9NXA8MF_01121194, 1, (STRLEN(?targetMotifMatchCigarQ9NXA8MF_01121194) - STRLEN(REPLACE(?targetMotifMatchCigarQ9NXA8MF_01121194, CONCAT('^(?:[a-z]*(?:[A-Z]|-)){', STR(?step1204), '}'), ''))))) - STRLEN(REPLACE(SUBSTR(?targetMotifMatchCigarQ9NXA8MF_01121194, 1, (STRLEN(?targetMotifMatchCigarQ9NXA8MF_01121194) - STRLEN(REPLACE(?targetMotifMatchCigarQ9NXA8MF_01121194, CONCAT('^(?:[a-z]*(?:[A-Z]|-)){', STR(?step1204), '}'), '')))), '[^-]', ''))) AS ?step2205) . BIND(((?step2205 + ?targetMotifMatchRegionMatchBeginPositionMF_01121195) - 1) AS ?thisPositionOn67) . BIND(STRLEN(REPLACE(SUBSTR(?templateMotifCigarQ9NXA8MF_01121192, 1, (STRLEN(?templateMotifCigarQ9NXA8MF_01121192) - STRLEN(REPLACE(?templateMotifCigarQ9NXA8MF_01121192, CONCAT('^(?:-*[^-]){', STR(((251 - ?templateMotifSequenceMatchBeginPositionQ9NXA8193) + 1)), '}'), '')))), '[a-z]', '')) AS ?step1206) . BIND((STRLEN(SUBSTR(?targetMotifMatchCigarQ9NXA8MF_01121194, 1, (STRLEN(?targetMotifMatchCigarQ9NXA8MF_01121194) - STRLEN(REPLACE(?targetMotifMatchCigarQ9NXA8MF_01121194, CONCAT('^(?:[a-z]*(?:[A-Z]|-)){', STR(?step1206), '}'), ''))))) - STRLEN(REPLACE(SUBSTR(?targetMotifMatchCigarQ9NXA8MF_01121194, 1, (STRLEN(?targetMotifMatchCigarQ9NXA8MF_01121194) - STRLEN(REPLACE(?targetMotifMatchCigarQ9NXA8MF_01121194, CONCAT('^(?:[a-z]*(?:[A-Z]|-)){', STR(?step1206), '}'), '')))), '[^-]', ''))) AS ?step2207) . BIND(((?step2207 + ?targetMotifMatchRegionMatchBeginPositionMF_01121195) - 1) AS ?thisPositionOn68) . BIND(?this AS ?pfs3t208) . BIND(URI(CONCAT(STR(?thisSequence), '#position', STR(?thisPositionOn67))) AS ?pfsb64) . BIND(URI(CONCAT(STR(?thisSequence), '#position', STR(?thisPositionOn68))) AS ?pfse65) . FILTER (REGEX('G[TS]S', SUBSTR(?thisSequenceValue, ?thisPositionOn67, (?thisPositionOn68 - ?thisPositionOn67)))) . BIND(URI(CONCAT(STR(?this), '#MF_03160a63')) AS ?annotation63) . BIND(?this AS ?pfs62) . } OPTIONAL { ?this up:sequence ?thisSequence . ?thisSequence rdf:value ?thisSequenceValue . ?templateMotifMatch213 faldo:location ?templateMotifSequenceMatchRegionQ9NXA8214 ; edam:is_output_of ?templateMotifSequenceProfileAlignmentOperationQ9NXA8216 ; rdf:type edam:data_0869 ; rdf:value ?templateMotifCigarQ9NXA8MF_01121209 . ?templateMotifSequenceMatchRegionQ9NXA8214 faldo:begin ?templateMotifSequenceMatchBeginQ9NXA8215 . ?templateMotifSequenceMatchBeginQ9NXA8215 faldo:position ?templateMotifSequenceMatchBeginPositionQ9NXA8210 ; faldo:reference isoform:Q9NXA8-1 . ?templateMotifSequenceProfileAlignmentOperationQ9NXA8216 edam:has_input signature:MF_01121 ; rdf:type edam:operation_0300 . ?targetMotifMatch217 faldo:location ?targetMotifMatchRegionMatch218 ; edam:is_output_of ?targetMotifSequenceAlignmentOperationMF_01121220 ; rdf:type edam:data_0869 ; rdf:value ?targetMotifMatchCigarQ9NXA8MF_01121211 . ?targetMotifMatchRegionMatch218 faldo:begin ?targetMotifMatchRegionMatchBeginMF_01121219 . ?targetMotifMatchRegionMatchBeginMF_01121219 faldo:position ?targetMotifMatchRegionMatchBeginPositionMF_01121212 ; faldo:reference ?thisSequence . ?targetMotifSequenceAlignmentOperationMF_01121220 edam:has_input signature:MF_01121 ; rdf:type edam:operation_0300 . BIND(STRLEN(REPLACE(SUBSTR(?templateMotifCigarQ9NXA8MF_01121209, 1, (STRLEN(?templateMotifCigarQ9NXA8MF_01121209) - STRLEN(REPLACE(?templateMotifCigarQ9NXA8MF_01121209, CONCAT('^(?:-*[^-]){', STR(((275 - ?templateMotifSequenceMatchBeginPositionQ9NXA8210) + 1)), '}'), '')))), '[a-z]', '')) AS ?step1221) . BIND((STRLEN(SUBSTR(?targetMotifMatchCigarQ9NXA8MF_01121211, 1, (STRLEN(?targetMotifMatchCigarQ9NXA8MF_01121211) - STRLEN(REPLACE(?targetMotifMatchCigarQ9NXA8MF_01121211, CONCAT('^(?:[a-z]*(?:[A-Z]|-)){', STR(?step1221), '}'), ''))))) - STRLEN(REPLACE(SUBSTR(?targetMotifMatchCigarQ9NXA8MF_01121211, 1, (STRLEN(?targetMotifMatchCigarQ9NXA8MF_01121211) - STRLEN(REPLACE(?targetMotifMatchCigarQ9NXA8MF_01121211, CONCAT('^(?:[a-z]*(?:[A-Z]|-)){', STR(?step1221), '}'), '')))), '[^-]', ''))) AS ?step2222) . BIND(((?step2222 + ?targetMotifMatchRegionMatchBeginPositionMF_01121212) - 1) AS ?thisPositionOn74) . BIND(STRLEN(REPLACE(SUBSTR(?templateMotifCigarQ9NXA8MF_01121209, 1, (STRLEN(?templateMotifCigarQ9NXA8MF_01121209) - STRLEN(REPLACE(?templateMotifCigarQ9NXA8MF_01121209, CONCAT('^(?:-*[^-]){', STR(((277 - ?templateMotifSequenceMatchBeginPositionQ9NXA8210) + 1)), '}'), '')))), '[a-z]', '')) AS ?step1223) . BIND((STRLEN(SUBSTR(?targetMotifMatchCigarQ9NXA8MF_01121211, 1, (STRLEN(?targetMotifMatchCigarQ9NXA8MF_01121211) - STRLEN(REPLACE(?targetMotifMatchCigarQ9NXA8MF_01121211, CONCAT('^(?:[a-z]*(?:[A-Z]|-)){', STR(?step1223), '}'), ''))))) - STRLEN(REPLACE(SUBSTR(?targetMotifMatchCigarQ9NXA8MF_01121211, 1, (STRLEN(?targetMotifMatchCigarQ9NXA8MF_01121211) - STRLEN(REPLACE(?targetMotifMatchCigarQ9NXA8MF_01121211, CONCAT('^(?:[a-z]*(?:[A-Z]|-)){', STR(?step1223), '}'), '')))), '[^-]', ''))) AS ?step2224) . BIND(((?step2224 + ?targetMotifMatchRegionMatchBeginPositionMF_01121212) - 1) AS ?thisPositionOn75) . BIND(?this AS ?pfs3t225) . BIND(URI(CONCAT(STR(?thisSequence), '#position', STR(?thisPositionOn74))) AS ?pfsb71) . BIND(URI(CONCAT(STR(?thisSequence), '#position', STR(?thisPositionOn75))) AS ?pfse72) . FILTER (REGEX('N[ARNDCQEGHILKMFPSTWYVBZJUOX]{2)', SUBSTR(?thisSequenceValue, ?thisPositionOn74, (?thisPositionOn75 - ?thisPositionOn74)))) . BIND(URI(CONCAT(STR(?this), '#MF_03160a70')) AS ?annotation70) . BIND(?this AS ?pfs69) . } OPTIONAL { ?this up:sequence ?thisSequence . ?thisSequence rdf:value ?thisSequenceValue . ?templateMotifMatch230 faldo:location ?templateMotifSequenceMatchRegionQ9NXA8231 ; edam:is_output_of ?templateMotifSequenceProfileAlignmentOperationQ9NXA8233 ; rdf:type edam:data_0869 ; rdf:value ?templateMotifCigarQ9NXA8MF_01121226 . ?templateMotifSequenceMatchRegionQ9NXA8231 faldo:begin ?templateMotifSequenceMatchBeginQ9NXA8232 . ?templateMotifSequenceMatchBeginQ9NXA8232 faldo:position ?templateMotifSequenceMatchBeginPositionQ9NXA8227 ; faldo:reference isoform:Q9NXA8-1 . ?templateMotifSequenceProfileAlignmentOperationQ9NXA8233 edam:has_input signature:MF_01121 ; rdf:type edam:operation_0300 . ?targetMotifMatch234 faldo:location ?targetMotifMatchRegionMatch235 ; edam:is_output_of ?targetMotifSequenceAlignmentOperationMF_01121237 ; rdf:type edam:data_0869 ; rdf:value ?targetMotifMatchCigarQ9NXA8MF_01121228 . ?targetMotifMatchRegionMatch235 faldo:begin ?targetMotifMatchRegionMatchBeginMF_01121236 . ?targetMotifMatchRegionMatchBeginMF_01121236 faldo:position ?targetMotifMatchRegionMatchBeginPositionMF_01121229 ; faldo:reference ?thisSequence . ?targetMotifSequenceAlignmentOperationMF_01121237 edam:has_input signature:MF_01121 ; rdf:type edam:operation_0300 . BIND(STRLEN(REPLACE(SUBSTR(?templateMotifCigarQ9NXA8MF_01121226, 1, (STRLEN(?templateMotifCigarQ9NXA8MF_01121226) - STRLEN(REPLACE(?templateMotifCigarQ9NXA8MF_01121226, CONCAT('^(?:-*[^-]){', STR(((158 - ?templateMotifSequenceMatchBeginPositionQ9NXA8227) + 1)), '}'), '')))), '[a-z]', '')) AS ?step1238) . BIND((STRLEN(SUBSTR(?targetMotifMatchCigarQ9NXA8MF_01121228, 1, (STRLEN(?targetMotifMatchCigarQ9NXA8MF_01121228) - STRLEN(REPLACE(?targetMotifMatchCigarQ9NXA8MF_01121228, CONCAT('^(?:[a-z]*(?:[A-Z]|-)){', STR(?step1238), '}'), ''))))) - STRLEN(REPLACE(SUBSTR(?targetMotifMatchCigarQ9NXA8MF_01121228, 1, (STRLEN(?targetMotifMatchCigarQ9NXA8MF_01121228) - STRLEN(REPLACE(?targetMotifMatchCigarQ9NXA8MF_01121228, CONCAT('^(?:[a-z]*(?:[A-Z]|-)){', STR(?step1238), '}'), '')))), '[^-]', ''))) AS ?step2239) . BIND(((?step2239 + ?targetMotifMatchRegionMatchBeginPositionMF_01121229) - 1) AS ?thisPositionOn80) . BIND(?thisPositionOn80 AS ?thisPositionOn81) . BIND(?this AS ?pfs3t240) . BIND(URI(CONCAT(STR(?thisSequence), '#position', STR(?thisPositionOn80))) AS ?pfsb78) . BIND(URI(CONCAT(STR(?thisSequence), '#position', STR(?thisPositionOn81))) AS ?pfse79) . FILTER ((SUBSTR(?thisSequenceValue, ?thisPositionOn80, 1) = 'H')) . BIND(URI(CONCAT(STR(?this), '#MF_03160a77')) AS ?annotation77) . BIND(?this AS ?pfs76) . } OPTIONAL { ?this up:sequence ?thisSequence . ?thisSequence rdf:value ?thisSequenceValue . ?templateMotifMatch245 faldo:location ?templateMotifSequenceMatchRegionQ9NXA8246 ; edam:is_output_of ?templateMotifSequenceProfileAlignmentOperationQ9NXA8248 ; rdf:type edam:data_0869 ; rdf:value ?templateMotifCigarQ9NXA8MF_01121241 . ?templateMotifSequenceMatchRegionQ9NXA8246 faldo:begin ?templateMotifSequenceMatchBeginQ9NXA8247 . ?templateMotifSequenceMatchBeginQ9NXA8247 faldo:position ?templateMotifSequenceMatchBeginPositionQ9NXA8242 ; faldo:reference isoform:Q9NXA8-1 . ?templateMotifSequenceProfileAlignmentOperationQ9NXA8248 edam:has_input signature:MF_01121 ; rdf:type edam:operation_0300 . ?targetMotifMatch249 faldo:location ?targetMotifMatchRegionMatch250 ; edam:is_output_of ?targetMotifSequenceAlignmentOperationMF_01121252 ; rdf:type edam:data_0869 ; rdf:value ?targetMotifMatchCigarQ9NXA8MF_01121243 . ?targetMotifMatchRegionMatch250 faldo:begin ?targetMotifMatchRegionMatchBeginMF_01121251 . ?targetMotifMatchRegionMatchBeginMF_01121251 faldo:position ?targetMotifMatchRegionMatchBeginPositionMF_01121244 ; faldo:reference ?thisSequence . ?targetMotifSequenceAlignmentOperationMF_01121252 edam:has_input signature:MF_01121 ; rdf:type edam:operation_0300 . BIND(STRLEN(REPLACE(SUBSTR(?templateMotifCigarQ9NXA8MF_01121241, 1, (STRLEN(?templateMotifCigarQ9NXA8MF_01121241) - STRLEN(REPLACE(?templateMotifCigarQ9NXA8MF_01121241, CONCAT('^(?:-*[^-]){', STR(((169 - ?templateMotifSequenceMatchBeginPositionQ9NXA8242) + 1)), '}'), '')))), '[a-z]', '')) AS ?step1253) . BIND((STRLEN(SUBSTR(?targetMotifMatchCigarQ9NXA8MF_01121243, 1, (STRLEN(?targetMotifMatchCigarQ9NXA8MF_01121243) - STRLEN(REPLACE(?targetMotifMatchCigarQ9NXA8MF_01121243, CONCAT('^(?:[a-z]*(?:[A-Z]|-)){', STR(?step1253), '}'), ''))))) - STRLEN(REPLACE(SUBSTR(?targetMotifMatchCigarQ9NXA8MF_01121243, 1, (STRLEN(?targetMotifMatchCigarQ9NXA8MF_01121243) - STRLEN(REPLACE(?targetMotifMatchCigarQ9NXA8MF_01121243, CONCAT('^(?:[a-z]*(?:[A-Z]|-)){', STR(?step1253), '}'), '')))), '[^-]', ''))) AS ?step2254) . BIND(((?step2254 + ?targetMotifMatchRegionMatchBeginPositionMF_01121244) - 1) AS ?thisPositionOn87) . BIND(?thisPositionOn87 AS ?thisPositionOn88) . BIND(?this AS ?pfs4t255) . BIND(URI(CONCAT(STR(?thisSequence), '#position', STR(?thisPositionOn87))) AS ?pfsb84) . BIND(URI(CONCAT(STR(?thisSequence), '#position', STR(?thisPositionOn88))) AS ?pfse85) . FILTER ((SUBSTR(?thisSequenceValue, ?thisPositionOn87, 1) = 'C')) . BIND(STRLEN(REPLACE(SUBSTR(?templateMotifCigarQ9NXA8MF_01121241, 1, (STRLEN(?templateMotifCigarQ9NXA8MF_01121241) - STRLEN(REPLACE(?templateMotifCigarQ9NXA8MF_01121241, CONCAT('^(?:-*[^-]){', STR(((212 - ?templateMotifSequenceMatchBeginPositionQ9NXA8242) + 1)), '}'), '')))), '[a-z]', '')) AS ?step1256) . BIND((STRLEN(SUBSTR(?targetMotifMatchCigarQ9NXA8MF_01121243, 1, (STRLEN(?targetMotifMatchCigarQ9NXA8MF_01121243) - STRLEN(REPLACE(?targetMotifMatchCigarQ9NXA8MF_01121243, CONCAT('^(?:[a-z]*(?:[A-Z]|-)){', STR(?step1256), '}'), ''))))) - STRLEN(REPLACE(SUBSTR(?targetMotifMatchCigarQ9NXA8MF_01121243, 1, (STRLEN(?targetMotifMatchCigarQ9NXA8MF_01121243) - STRLEN(REPLACE(?targetMotifMatchCigarQ9NXA8MF_01121243, CONCAT('^(?:[a-z]*(?:[A-Z]|-)){', STR(?step1256), '}'), '')))), '[^-]', ''))) AS ?step2257) . BIND(((?step2257 + ?targetMotifMatchRegionMatchBeginPositionMF_01121244) - 1) AS ?thisPositionOn93) . BIND(?thisPositionOn93 AS ?thisPositionOn94) . BIND(?this AS ?pfs4t258) . BIND(URI(CONCAT(STR(?thisSequence), '#position', STR(?thisPositionOn93))) AS ?pfsb90) . BIND(URI(CONCAT(STR(?thisSequence), '#position', STR(?thisPositionOn94))) AS ?pfse91) . FILTER ((SUBSTR(?thisSequenceValue, ?thisPositionOn93, 1) = 'C')) . BIND(?this AS ?pfs82) . } OPTIONAL { ?this up:sequence ?thisSequence . ?thisSequence rdf:value ?thisSequenceValue . ?templateMotifMatch263 faldo:location ?templateMotifSequenceMatchRegionQ9NXA8264 ; edam:is_output_of ?templateMotifSequenceProfileAlignmentOperationQ9NXA8266 ; rdf:type edam:data_0869 ; rdf:value ?templateMotifCigarQ9NXA8MF_01121259 . ?templateMotifSequenceMatchRegionQ9NXA8264 faldo:begin ?templateMotifSequenceMatchBeginQ9NXA8265 . ?templateMotifSequenceMatchBeginQ9NXA8265 faldo:position ?templateMotifSequenceMatchBeginPositionQ9NXA8260 ; faldo:reference isoform:Q9NXA8-1 . ?templateMotifSequenceProfileAlignmentOperationQ9NXA8266 edam:has_input signature:MF_01121 ; rdf:type edam:operation_0300 . ?targetMotifMatch267 faldo:location ?targetMotifMatchRegionMatch268 ; edam:is_output_of ?targetMotifSequenceAlignmentOperationMF_01121270 ; rdf:type edam:data_0869 ; rdf:value ?targetMotifMatchCigarQ9NXA8MF_01121261 . ?targetMotifMatchRegionMatch268 faldo:begin ?targetMotifMatchRegionMatchBeginMF_01121269 . ?targetMotifMatchRegionMatchBeginMF_01121269 faldo:position ?targetMotifMatchRegionMatchBeginPositionMF_01121262 ; faldo:reference ?thisSequence . ?targetMotifSequenceAlignmentOperationMF_01121270 edam:has_input signature:MF_01121 ; rdf:type edam:operation_0300 . ?this up:organism ?thisOrganism . ?thisOrganism rdfs:subClassOf+ taxon:7742 . BIND(1 AS ?thisPositionOn99) . BIND(STRLEN(REPLACE(SUBSTR(?templateMotifCigarQ9NXA8MF_01121259, 1, (STRLEN(?templateMotifCigarQ9NXA8MF_01121259) - STRLEN(REPLACE(?templateMotifCigarQ9NXA8MF_01121259, CONCAT('^(?:-*[^-]){', STR(((36 - ?templateMotifSequenceMatchBeginPositionQ9NXA8260) + 1)), '}'), '')))), '[a-z]', '')) AS ?step1271) . BIND((STRLEN(SUBSTR(?targetMotifMatchCigarQ9NXA8MF_01121261, 1, (STRLEN(?targetMotifMatchCigarQ9NXA8MF_01121261) - STRLEN(REPLACE(?targetMotifMatchCigarQ9NXA8MF_01121261, CONCAT('^(?:[a-z]*(?:[A-Z]|-)){', STR(?step1271), '}'), ''))))) - STRLEN(REPLACE(SUBSTR(?targetMotifMatchCigarQ9NXA8MF_01121261, 1, (STRLEN(?targetMotifMatchCigarQ9NXA8MF_01121261) - STRLEN(REPLACE(?targetMotifMatchCigarQ9NXA8MF_01121261, CONCAT('^(?:[a-z]*(?:[A-Z]|-)){', STR(?step1271), '}'), '')))), '[^-]', ''))) AS ?step2272) . BIND(((?step2272 + ?targetMotifMatchRegionMatchBeginPositionMF_01121262) - 1) AS ?thisPositionOn100) . BIND(?this AS ?pfs5t273) . BIND(URI(CONCAT(STR(?thisSequence), '#position', STR(?thisPositionOn99))) AS ?pfsb97) . BIND(URI(CONCAT(STR(?thisSequence), '#position', STR(?thisPositionOn100))) AS ?pfse98) . FILTER ((BOUND(?thisPositionOn99) && BOUND(?thisPositionOn100))) . BIND(URI(CONCAT(STR(?this), '#MF_03160a96')) AS ?annotation96) . BIND(?this AS ?pfs95) . } OPTIONAL { ?this up:sequence ?thisSequence . ?thisSequence rdf:value ?thisSequenceValue . ?templateMotifMatch278 faldo:location ?templateMotifSequenceMatchRegionQ9NXA8279 ; edam:is_output_of ?templateMotifSequenceProfileAlignmentOperationQ9NXA8281 ; rdf:type edam:data_0869 ; rdf:value ?templateMotifCigarQ9NXA8MF_01121274 . ?templateMotifSequenceMatchRegionQ9NXA8279 faldo:begin ?templateMotifSequenceMatchBeginQ9NXA8280 . ?templateMotifSequenceMatchBeginQ9NXA8280 faldo:position ?templateMotifSequenceMatchBeginPositionQ9NXA8275 ; faldo:reference isoform:Q9NXA8-1 . ?templateMotifSequenceProfileAlignmentOperationQ9NXA8281 edam:has_input signature:MF_01121 ; rdf:type edam:operation_0300 . ?targetMotifMatch282 faldo:location ?targetMotifMatchRegionMatch283 ; edam:is_output_of ?targetMotifSequenceAlignmentOperationMF_01121285 ; rdf:type edam:data_0869 ; rdf:value ?targetMotifMatchCigarQ9NXA8MF_01121276 . ?targetMotifMatchRegionMatch283 faldo:begin ?targetMotifMatchRegionMatchBeginMF_01121284 . ?targetMotifMatchRegionMatchBeginMF_01121284 faldo:position ?targetMotifMatchRegionMatchBeginPositionMF_01121277 ; faldo:reference ?thisSequence . ?targetMotifSequenceAlignmentOperationMF_01121285 edam:has_input signature:MF_01121 ; rdf:type edam:operation_0300 . ?this up:organism ?thisOrganism . ?thisOrganism rdfs:subClassOf+ taxon:7742 . BIND(STRLEN(REPLACE(SUBSTR(?templateMotifCigarQ9NXA8MF_01121274, 1, (STRLEN(?templateMotifCigarQ9NXA8MF_01121274) - STRLEN(REPLACE(?templateMotifCigarQ9NXA8MF_01121274, CONCAT('^(?:-*[^-]){', STR(((37 - ?templateMotifSequenceMatchBeginPositionQ9NXA8275) + 1)), '}'), '')))), '[a-z]', '')) AS ?step1286) . BIND((STRLEN(SUBSTR(?targetMotifMatchCigarQ9NXA8MF_01121276, 1, (STRLEN(?targetMotifMatchCigarQ9NXA8MF_01121276) - STRLEN(REPLACE(?targetMotifMatchCigarQ9NXA8MF_01121276, CONCAT('^(?:[a-z]*(?:[A-Z]|-)){', STR(?step1286), '}'), ''))))) - STRLEN(REPLACE(SUBSTR(?targetMotifMatchCigarQ9NXA8MF_01121276, 1, (STRLEN(?targetMotifMatchCigarQ9NXA8MF_01121276) - STRLEN(REPLACE(?targetMotifMatchCigarQ9NXA8MF_01121276, CONCAT('^(?:[a-z]*(?:[A-Z]|-)){', STR(?step1286), '}'), '')))), '[^-]', ''))) AS ?step2287) . BIND(((?step2287 + ?targetMotifMatchRegionMatchBeginPositionMF_01121277) - 1) AS ?thisPositionOn105) . BIND(STRLEN(?thisSequenceValue) AS ?thisPositionOn106) . BIND(?this AS ?pfs5t288) . BIND(URI(CONCAT(STR(?thisSequence), '#position', STR(?thisPositionOn105))) AS ?pfsb103) . BIND(URI(CONCAT(STR(?thisSequence), '#position', STR(?thisPositionOn106))) AS ?pfse104) . FILTER ((BOUND(?thisPositionOn105) && BOUND(?thisPositionOn106))) . BIND(URI(CONCAT(STR(?this), '#MF_03160a102')) AS ?annotation102) . BIND(?this AS ?pfs101) . } OPTIONAL { ?this a up:Protein . BIND(?this AS ?caseWithTag289) . } BIND(IF(BOUND(?tagFTGRP_1), ?caseWithTag289, ?UNBOUND_VARIABLE) AS ?case1) . OPTIONAL { ?this a up:Protein . BIND(?this AS ?caseWithTag290) . } BIND(IF(BOUND(?tagFTGRP_3), ?caseWithTag290, ?UNBOUND_VARIABLE) AS ?case2) . OPTIONAL { ?this a up:Protein . BIND(?this AS ?caseWithTag291) . } BIND(IF(BOUND(?tagFTGRP_3), ?caseWithTag291, ?UNBOUND_VARIABLE) AS ?case3) . OPTIONAL { ?this a up:Protein . ?this up:organism ?thisOrganism . ?thisOrganism rdfs:subClassOf+ taxon:7742 . BIND(?this AS ?case4) . BIND(URI(CONCAT(STR(?this), '#MF_03160a5')) AS ?name5) . BIND(URI(CONCAT(STR(?this), '#MF_03160a6')) AS ?name6) . BIND(URI(CONCAT(STR(?this), '#MF_03160a7')) AS ?name7) . } OPTIONAL { ?this a up:Protein . ?this up:organism ?thisOrganism . FILTER (! (EXISTS { ?thisOrganism rdfs:subClassOf+ taxon:7742 . })) . BIND(?this AS ?case8) . BIND(URI(CONCAT(STR(?this), '#MF_03160a9')) AS ?name9) . BIND(URI(CONCAT(STR(?this), '#MF_03160a10')) AS ?name10) . } OPTIONAL { ?this a up:Protein . ?this up:organism ?thisOrganism . ?thisOrganism rdfs:subClassOf+ taxon:40674 . BIND(?this AS ?caseWithTag292) . } BIND(IF(BOUND(?tagFTGRP_3), ?caseWithTag292, ?UNBOUND_VARIABLE) AS ?case11) . OPTIONAL { ?this a up:Protein . ?this up:organism ?thisOrganism . FILTER (! (EXISTS { ?thisOrganism rdfs:subClassOf+ taxon:40674 . })) . BIND(?this AS ?caseWithTag293) . } BIND(IF(BOUND(?tagFTGRP_3), ?caseWithTag293, ?UNBOUND_VARIABLE) AS ?case12) . }