CONSTRUCT { _:895498 up:source unirule:MF_04032 . _:895499 up:source unirule:MF_04032 . _:895500 up:source unirule:MF_04032 . _:895501 up:source unirule:MF_04032 . _:895502 up:source unirule:MF_04032 . _:895503 up:source unirule:MF_04032 . _:895504 up:source unirule:MF_04032 . _:895505 up:source unirule:MF_04032 . _:895506 up:source unirule:MF_04032 . _:895507 up:source unirule:MF_04032 . _:895508 up:source unirule:MF_04032 . _:895509 up:source unirule:MF_04032 . _:895510 up:source unirule:MF_04032 . _:895511 up:source unirule:MF_04032 . _:895512 up:source unirule:MF_04032 . _:895513 up:source unirule:MF_04032 . _:895514 up:source unirule:MF_04032 . _:895515 up:source unirule:MF_04032 . _:895516 up:source unirule:MF_04032 . _:895517 up:source unirule:MF_04032 . _:895518 up:source unirule:MF_04032 . _:895519 up:source unirule:MF_04032 . _:895520 up:source unirule:MF_04032 . _:895521 up:source unirule:MF_04032 . _:895522 up:source unirule:MF_04032 . _:895523 up:source unirule:MF_04032 . _:895524 up:source unirule:MF_04032 . _:895525 up:source unirule:MF_04032 . _:895526 up:source unirule:MF_04032 . _:895527 up:source unirule:MF_04032 . _:895528 up:source unirule:MF_04032 . _:895529 up:source unirule:MF_04032 . _:895530 up:source unirule:MF_04032 . _:895531 up:source unirule:MF_04032 . _:895532 up:source unirule:MF_04032 . _:895533 up:source unirule:MF_04032 . _:895534 up:source unirule:MF_04032 . _:895535 up:source unirule:MF_04032 . _:895536 up:source unirule:MF_04032 . _:895537 up:source unirule:MF_04032 . _:895538 up:source unirule:MF_04032 . _:895539 up:source unirule:MF_04032 . _:895540 up:source unirule:MF_04032 . _:895541 up:source unirule:MF_04032 . ?this up:annotation ?annotation2 , ?annotation3 , ?annotation4 , ?annotation9 ; up:classifiedWith GO:0016020 , GO:0019031 , GO:0019062 , GO:0020002 , GO:0044175 , GO:0044178 , GO:0046718 , GO:0055036 , keyword:1015 , keyword:1032 , keyword:1039 , keyword:1040 , keyword:1043 , keyword:1133 , keyword:1160 , keyword:1161 , keyword:261 , keyword:325 , keyword:472 , keyword:732 , keyword:812 , keyword:945 , keyword:946 ; up:precursor "true"^^xsd:boolean ; up:recommendedName ?name0 . ?name0 up:fullName 'Envelope glycoprotein B' ; up:shortName 'gB' ; rdf:type up:Structured_Name . ?gene1 skos:prefLabel 'gB' . ?annotation2 a up:Function_Annotation ; rdfs:comment 'Envelope glycoprotein that forms spikes at the surface of virion envelope. Essential for the initial attachment to heparan sulfate moities of the host cell surface proteoglycans. Involved in fusion of viral and cellular membranes leading to virus entry into the host cell. Following initial binding to its host receptors, membrane fusion is mediated by the fusion machinery composed at least of gB and the heterodimer gH/gL. May be involved in the fusion between the virion envelope and the outer nuclear membrane during virion egress.' . ?annotation3 a up:Subunit_Annotation ; rdfs:comment 'Homotrimer; disulfide-linked. Binds to heparan sulfate proteoglycans. Interacts with gH/gL heterodimer.' . ?annotation4 a up:Subcellular_Location_Annotation ; rdfs:comment 'During virion morphogenesis, this protein probably accumulates in the endosomes and trans-Golgi where secondary envelopment occurs. It is probably transported to the cell surface from where it is endocytosed and directed to the trans-Golgi network (TGN)' . ?annotation4li5 up:cellularComponent <http://purl.uniprot.org/locations/null>. ?annotation4li6 up:cellularComponent <http://purl.uniprot.org/locations/null>. ?annotation4li7 up:cellularComponent <http://purl.uniprot.org/locations/null>. ?annotation4li8 up:cellularComponent <http://purl.uniprot.org/locations/null>. ?annotation9 a up:Similarity_Annotation ; rdfs:comment 'Belongs to the herpesviridae glycoprotein B family.' . ?pfs10 up:annotation ?annotation11 . ?annotation11 faldo:begin ?pfsb12 ; faldo:end ?pfse13 ; rdf:type up:Topological_Domain_Annotation ; rdfs:comment 'Virion surface' . ?pfsb12 faldo:position ?thisPositionOn14 ; rdf:type faldo:ExactPosition . ?pfse13 faldo:position ?thisPositionOn15 ; rdf:type faldo:ExactPosition . ?pfs16 up:annotation ?annotation17 . ?annotation17 faldo:begin ?pfsb18 ; faldo:end ?pfse19 ; rdf:type up:Transmembrane_Annotation ; rdfs:comment 'Helical' . ?pfsb18 faldo:position ?thisPositionOn20 ; rdf:type faldo:ExactPosition . ?pfse19 faldo:position ?thisPositionOn21 ; rdf:type faldo:ExactPosition . ?pfs22 up:annotation ?annotation23 . ?annotation23 faldo:begin ?pfsb24 ; faldo:end ?pfse25 ; rdf:type up:Topological_Domain_Annotation ; rdfs:comment 'Intravirion' . ?pfsb24 faldo:position ?thisPositionOn26 ; rdf:type faldo:ExactPosition . ?pfse25 faldo:position ?thisPositionOn27 ; rdf:type faldo:ExactPosition . ?pfs28 up:annotation ?annotation29 . ?annotation29 faldo:begin ?pfsb30 ; faldo:end ?pfse31 ; rdf:type up:Region_Annotation ; rdfs:comment 'Involved in fusion and/or binding to host membrane' . ?pfsb30 faldo:position ?thisPositionOn32 ; rdf:type faldo:ExactPosition . ?pfse31 faldo:position ?thisPositionOn33 ; rdf:type faldo:ExactPosition . ?pfs34 up:annotation ?annotation35 . ?annotation35 faldo:begin ?pfsb36 ; faldo:end ?pfse37 ; rdf:type up:Region_Annotation ; rdfs:comment 'Involved in fusion and/or binding to host membrane' . ?pfsb36 faldo:position ?thisPositionOn38 ; rdf:type faldo:ExactPosition . ?pfse37 faldo:position ?thisPositionOn39 ; rdf:type faldo:ExactPosition . ?pfs40 up:annotation ?annotation41 . ?annotation41 faldo:begin ?pfsb42 ; faldo:end ?pfse43 ; rdf:type up:Region_Annotation ; rdfs:comment 'Hydrophobic membrane proximal region' . ?pfsb42 faldo:position ?thisPositionOn44 ; rdf:type faldo:ExactPosition . ?pfse43 faldo:position ?thisPositionOn45 ; rdf:type faldo:ExactPosition . ?pfs46 up:annotation ?annotation47 . ?annotation47 faldo:begin ?pfsb48 ; faldo:end ?pfse49 ; rdf:type up:Motif_Annotation ; rdfs:comment 'Golgi targeting' . ?pfsb48 faldo:position ?thisPositionOn50 ; rdf:type faldo:ExactPosition . ?pfse49 faldo:position ?thisPositionOn51 ; rdf:type faldo:ExactPosition . ?pfs52 up:annotation ?annotation53 . ?annotation53 faldo:begin ?pfsb54 ; faldo:end ?pfse55 ; rdf:type up:Motif_Annotation ; rdfs:comment 'Internalization motif' . ?pfsb54 faldo:position ?thisPositionOn56 ; rdf:type faldo:ExactPosition . ?pfse55 faldo:position ?thisPositionOn57 ; rdf:type faldo:ExactPosition . ?pfs58 up:annotation ?annotation59 . ?annotation59 faldo:begin ?pfsb60 ; faldo:end ?pfse61 ; rdf:type up:Disulfide_Bond_Annotation . ?pfsb60 faldo:position ?thisPositionOn62 ; rdf:type faldo:ExactPosition . ?pfse61 faldo:position ?thisPositionOn63 ; rdf:type faldo:ExactPosition . ?pfs64 up:annotation ?annotation65 . ?annotation65 faldo:begin ?pfsb66 ; faldo:end ?pfse67 ; rdf:type up:Disulfide_Bond_Annotation . ?pfsb66 faldo:position ?thisPositionOn68 ; rdf:type faldo:ExactPosition . ?pfse67 faldo:position ?thisPositionOn69 ; rdf:type faldo:ExactPosition . ?pfs70 up:annotation ?annotation71 . ?annotation71 faldo:begin ?pfsb72 ; faldo:end ?pfse73 ; rdf:type up:Disulfide_Bond_Annotation . ?pfsb72 faldo:position ?thisPositionOn74 ; rdf:type faldo:ExactPosition . ?pfse73 faldo:position ?thisPositionOn75 ; rdf:type faldo:ExactPosition . ?pfs76 up:annotation ?annotation77 . ?annotation77 faldo:begin ?pfsb78 ; faldo:end ?pfse79 ; rdf:type up:Disulfide_Bond_Annotation . ?pfsb78 faldo:position ?thisPositionOn80 ; rdf:type faldo:ExactPosition . ?pfse79 faldo:position ?thisPositionOn81 ; rdf:type faldo:ExactPosition . ?pfs82 up:annotation ?annotation83 . ?annotation83 faldo:begin ?pfsb84 ; faldo:end ?pfse85 ; rdf:type up:Disulfide_Bond_Annotation . ?pfsb84 faldo:position ?thisPositionOn86 ; rdf:type faldo:ExactPosition . ?pfse85 faldo:position ?thisPositionOn87 ; rdf:type faldo:ExactPosition . ?sam88 up:classifiedWith keyword:732 . ?signal89 faldo:begin ?signalb90 ; faldo:end ?signale91 . ?signalb90 faldo:position ?signalbp92 . ?signale91 faldo:position ?signalep93 . ?keyword94 up:range ?signal89 . _:895542 a rdf:Statement ; up:attribution _:895498 ; rdf:subject ?this ; rdf:predicate up:recommendedName ; rdf:object ?name0 . _:895543 a rdf:Statement ; up:attribution _:895499 ; rdf:subject ?this ; rdf:predicate up:precursor ; rdf:object "true"^^xsd:boolean . _:895544 a rdf:Statement ; up:attribution _:895500 ; rdf:subject ?gene1 ; rdf:predicate up:encodedBy ; rdf:object ?gene1 . _:895545 a rdf:Statement ; up:attribution _:895501 ; rdf:subject ?this ; rdf:predicate up:annotation ; rdf:object ?annotation2 . _:895546 a rdf:Statement ; up:attribution _:895502 ; rdf:subject ?this ; rdf:predicate up:annotation ; rdf:object ?annotation3 . _:895547 a rdf:Statement ; up:attribution _:895503 ; rdf:subject ?this ; rdf:predicate up:annotation ; rdf:object ?annotation4 . _:895548 a rdf:Statement ; up:attribution _:895504 ; rdf:subject ?this ; rdf:predicate up:annotation ; rdf:object ?annotation9 . _:895549 a rdf:Statement ; up:attribution _:895505 ; rdf:subject ?this ; rdf:predicate up:classifiedWith ; rdf:object keyword:1015 . _:895550 a rdf:Statement ; up:attribution _:895506 ; rdf:subject ?this ; rdf:predicate up:classifiedWith ; rdf:object keyword:325 . _:895551 a rdf:Statement ; up:attribution _:895507 ; rdf:subject ?this ; rdf:predicate up:classifiedWith ; rdf:object keyword:1032 . _:895552 a rdf:Statement ; up:attribution _:895508 ; rdf:subject ?this ; rdf:predicate up:classifiedWith ; rdf:object keyword:1039 . _:895553 a rdf:Statement ; up:attribution _:895509 ; rdf:subject ?this ; rdf:predicate up:classifiedWith ; rdf:object keyword:1040 . _:895554 a rdf:Statement ; up:attribution _:895510 ; rdf:subject ?this ; rdf:predicate up:classifiedWith ; rdf:object keyword:1043 . _:895555 a rdf:Statement ; up:attribution _:895511 ; rdf:subject ?this ; rdf:predicate up:classifiedWith ; rdf:object keyword:945 . _:895556 a rdf:Statement ; up:attribution _:895512 ; rdf:subject ?this ; rdf:predicate up:classifiedWith ; rdf:object keyword:472 . _:895557 a rdf:Statement ; up:attribution _:895513 ; rdf:subject ?this ; rdf:predicate up:classifiedWith ; rdf:object keyword:732 . _:895558 a rdf:Statement ; up:attribution _:895514 ; rdf:subject ?this ; rdf:predicate up:classifiedWith ; rdf:object keyword:812 . _:895559 a rdf:Statement ; up:attribution _:895515 ; rdf:subject ?this ; rdf:predicate up:classifiedWith ; rdf:object keyword:1133 . _:895560 a rdf:Statement ; up:attribution _:895516 ; rdf:subject ?this ; rdf:predicate up:classifiedWith ; rdf:object keyword:1161 . _:895561 a rdf:Statement ; up:attribution _:895517 ; rdf:subject ?this ; rdf:predicate up:classifiedWith ; rdf:object keyword:261 . _:895562 a rdf:Statement ; up:attribution _:895518 ; rdf:subject ?this ; rdf:predicate up:classifiedWith ; rdf:object keyword:946 . _:895563 a rdf:Statement ; up:attribution _:895519 ; rdf:subject ?this ; rdf:predicate up:classifiedWith ; rdf:object keyword:1160 . _:895564 a rdf:Statement ; up:attribution _:895520 ; rdf:subject ?this ; rdf:predicate up:classifiedWith ; rdf:object GO:0044175 . _:895565 a rdf:Statement ; up:attribution _:895521 ; rdf:subject ?this ; rdf:predicate up:classifiedWith ; rdf:object GO:0044178 . _:895566 a rdf:Statement ; up:attribution _:895522 ; rdf:subject ?this ; rdf:predicate up:classifiedWith ; rdf:object GO:0020002 . _:895567 a rdf:Statement ; up:attribution _:895523 ; rdf:subject ?this ; rdf:predicate up:classifiedWith ; rdf:object GO:0016020 . _:895568 a rdf:Statement ; up:attribution _:895524 ; rdf:subject ?this ; rdf:predicate up:classifiedWith ; rdf:object GO:0019031 . _:895569 a rdf:Statement ; up:attribution _:895525 ; rdf:subject ?this ; rdf:predicate up:classifiedWith ; rdf:object GO:0055036 . _:895570 a rdf:Statement ; up:attribution _:895526 ; rdf:subject ?this ; rdf:predicate up:classifiedWith ; rdf:object GO:0046718 . _:895571 a rdf:Statement ; up:attribution _:895527 ; rdf:subject ?this ; rdf:predicate up:classifiedWith ; rdf:object GO:0019062 . _:895572 a rdf:Statement ; up:source unirule:MF_04032 ; rdf:subject ?pfs10 ; rdf:predicate up:annotation ; rdf:object ?annotation11 . _:895573 a rdf:Statement ; up:attribution _:895528 ; rdf:subject ?pfs10 ; rdf:predicate up:annotation ; rdf:object ?annotation11 . _:895574 a rdf:Statement ; up:source unirule:MF_04032 ; rdf:subject ?pfs16 ; rdf:predicate up:annotation ; rdf:object ?annotation17 . _:895575 a rdf:Statement ; up:attribution _:895529 ; rdf:subject ?pfs16 ; rdf:predicate up:annotation ; rdf:object ?annotation17 . _:895576 a rdf:Statement ; up:source unirule:MF_04032 ; rdf:subject ?pfs22 ; rdf:predicate up:annotation ; rdf:object ?annotation23 . _:895577 a rdf:Statement ; up:attribution _:895530 ; rdf:subject ?pfs22 ; rdf:predicate up:annotation ; rdf:object ?annotation23 . _:895578 a rdf:Statement ; up:source unirule:MF_04032 ; rdf:subject ?pfs28 ; rdf:predicate up:annotation ; rdf:object ?annotation29 . _:895579 a rdf:Statement ; up:attribution _:895531 ; rdf:subject ?pfs28 ; rdf:predicate up:annotation ; rdf:object ?annotation29 . _:895580 a rdf:Statement ; up:source unirule:MF_04032 ; rdf:subject ?pfs34 ; rdf:predicate up:annotation ; rdf:object ?annotation35 . _:895581 a rdf:Statement ; up:attribution _:895532 ; rdf:subject ?pfs34 ; rdf:predicate up:annotation ; rdf:object ?annotation35 . _:895582 a rdf:Statement ; up:source unirule:MF_04032 ; rdf:subject ?pfs40 ; rdf:predicate up:annotation ; rdf:object ?annotation41 . _:895583 a rdf:Statement ; up:attribution _:895533 ; rdf:subject ?pfs40 ; rdf:predicate up:annotation ; rdf:object ?annotation41 . _:895584 a rdf:Statement ; up:source unirule:MF_04032 ; rdf:subject ?pfs46 ; rdf:predicate up:annotation ; rdf:object ?annotation47 . _:895585 a rdf:Statement ; up:attribution _:895534 ; rdf:subject ?pfs46 ; rdf:predicate up:annotation ; rdf:object ?annotation47 . _:895586 a rdf:Statement ; up:source unirule:MF_04032 ; rdf:subject ?pfs52 ; rdf:predicate up:annotation ; rdf:object ?annotation53 . _:895587 a rdf:Statement ; up:attribution _:895535 ; rdf:subject ?pfs52 ; rdf:predicate up:annotation ; rdf:object ?annotation53 . _:895588 a rdf:Statement ; up:source unirule:MF_04032 ; rdf:subject ?pfs58 ; rdf:predicate up:annotation ; rdf:object ?annotation59 . _:895589 a rdf:Statement ; up:attribution _:895536 ; rdf:subject ?pfs58 ; rdf:predicate up:annotation ; rdf:object ?annotation59 . _:895590 a rdf:Statement ; up:source unirule:MF_04032 ; rdf:subject ?pfs64 ; rdf:predicate up:annotation ; rdf:object ?annotation65 . _:895591 a rdf:Statement ; up:attribution _:895537 ; rdf:subject ?pfs64 ; rdf:predicate up:annotation ; rdf:object ?annotation65 . _:895592 a rdf:Statement ; up:source unirule:MF_04032 ; rdf:subject ?pfs70 ; rdf:predicate up:annotation ; rdf:object ?annotation71 . _:895593 a rdf:Statement ; up:attribution _:895538 ; rdf:subject ?pfs70 ; rdf:predicate up:annotation ; rdf:object ?annotation71 . _:895594 a rdf:Statement ; up:source unirule:MF_04032 ; rdf:subject ?pfs76 ; rdf:predicate up:annotation ; rdf:object ?annotation77 . _:895595 a rdf:Statement ; up:attribution _:895539 ; rdf:subject ?pfs76 ; rdf:predicate up:annotation ; rdf:object ?annotation77 . _:895596 a rdf:Statement ; up:source unirule:MF_04032 ; rdf:subject ?pfs82 ; rdf:predicate up:annotation ; rdf:object ?annotation83 . _:895597 a rdf:Statement ; up:attribution _:895540 ; rdf:subject ?pfs82 ; rdf:predicate up:annotation ; rdf:object ?annotation83 . _:895598 a rdf:Statement ; up:attribution _:895541 ; rdf:subject ?sam88 ; rdf:predicate up:classifiedWith ; rdf:object keyword:732 . } WHERE { #baseURI: http://purl.uniprot.org/unirule/MF_04032 #Rule MF_04032 Created by:pmasson on:2016-05-12 Modified by:crivoire on:2024-03-01 ?this up:organism ?thisOrganism ; rdfs:seeAlso signature:MF_04032 . ?thisOrganism rdfs:subClassOf+ taxon:10292 . BIND(URI(CONCAT(STR(?this), '#MF_04032a0')) AS ?name0) . BIND(URI(CONCAT(STR(?this), '#MF_04032a2')) AS ?annotation2) . BIND(URI(CONCAT(STR(?this), '#MF_04032a3')) AS ?annotation3) . BIND(URI(CONCAT(STR(?this), '#MF_04032a4')) AS ?annotation4) . BIND(URI(CONCAT(STR(?this), '#MF_04032a9')) AS ?annotation9) . OPTIONAL { ?this up:sequence ?thisSequence . ?thisSequence rdf:value ?thisSequenceValue . ?templateMotifMatch99 faldo:location ?templateMotifSequenceMatchRegionP10211100 ; edam:is_output_of ?templateMotifSequenceProfileAlignmentOperationP10211102 ; rdf:type edam:data_0869 ; rdf:value ?templateMotifCigarP10211MF_0403295 . ?templateMotifSequenceMatchRegionP10211100 faldo:begin ?templateMotifSequenceMatchBeginP10211101 . ?templateMotifSequenceMatchBeginP10211101 faldo:position ?templateMotifSequenceMatchBeginPositionP1021196 ; faldo:reference isoform:P10211-1 . ?templateMotifSequenceProfileAlignmentOperationP10211102 edam:has_input signature:MF_04032 ; rdf:type edam:operation_0300 . ?targetMotifMatch103 faldo:location ?targetMotifMatchRegionMatch104 ; edam:is_output_of ?targetMotifSequenceAlignmentOperationMF_04032106 ; rdf:type edam:data_0869 ; rdf:value ?targetMotifMatchCigarP10211MF_0403297 . ?targetMotifMatchRegionMatch104 faldo:begin ?targetMotifMatchRegionMatchBeginMF_04032105 . ?targetMotifMatchRegionMatchBeginMF_04032105 faldo:position ?targetMotifMatchRegionMatchBeginPositionMF_0403298 ; faldo:reference ?thisSequence . ?targetMotifSequenceAlignmentOperationMF_04032106 edam:has_input signature:MF_04032 ; rdf:type edam:operation_0300 . BIND(1 AS ?thisPositionOn14) . BIND(STRLEN(REPLACE(SUBSTR(?templateMotifCigarP10211MF_0403295, 1, (STRLEN(?templateMotifCigarP10211MF_0403295) - STRLEN(REPLACE(?templateMotifCigarP10211MF_0403295, CONCAT('^(?:-*[^-]){', STR(((774 - ?templateMotifSequenceMatchBeginPositionP1021196) + 1)), '}'), '')))), '[a-z]', '')) AS ?step1107) . BIND((STRLEN(SUBSTR(?targetMotifMatchCigarP10211MF_0403297, 1, (STRLEN(?targetMotifMatchCigarP10211MF_0403297) - STRLEN(REPLACE(?targetMotifMatchCigarP10211MF_0403297, CONCAT('^(?:[a-z]*(?:[A-Z]|-)){', STR(?step1107), '}'), ''))))) - STRLEN(REPLACE(SUBSTR(?targetMotifMatchCigarP10211MF_0403297, 1, (STRLEN(?targetMotifMatchCigarP10211MF_0403297) - STRLEN(REPLACE(?targetMotifMatchCigarP10211MF_0403297, CONCAT('^(?:[a-z]*(?:[A-Z]|-)){', STR(?step1107), '}'), '')))), '[^-]', ''))) AS ?step2108) . BIND(((?step2108 + ?targetMotifMatchRegionMatchBeginPositionMF_0403298) - 1) AS ?thisPositionOn15) . BIND(?this AS ?pfs1t109) . BIND(URI(CONCAT(STR(?thisSequence), '#position', STR(?thisPositionOn14))) AS ?pfsb12) . BIND(URI(CONCAT(STR(?thisSequence), '#position', STR(?thisPositionOn15))) AS ?pfse13) . FILTER ((BOUND(?thisPositionOn14) && BOUND(?thisPositionOn15))) . BIND(URI(CONCAT(STR(?this), '#MF_04032a11')) AS ?annotation11) . BIND(?this AS ?pfs10) . } OPTIONAL { ?this up:sequence ?thisSequence . ?thisSequence rdf:value ?thisSequenceValue . ?templateMotifMatch114 faldo:location ?templateMotifSequenceMatchRegionP10211115 ; edam:is_output_of ?templateMotifSequenceProfileAlignmentOperationP10211117 ; rdf:type edam:data_0869 ; rdf:value ?templateMotifCigarP10211MF_04032110 . ?templateMotifSequenceMatchRegionP10211115 faldo:begin ?templateMotifSequenceMatchBeginP10211116 . ?templateMotifSequenceMatchBeginP10211116 faldo:position ?templateMotifSequenceMatchBeginPositionP10211111 ; faldo:reference isoform:P10211-1 . ?templateMotifSequenceProfileAlignmentOperationP10211117 edam:has_input signature:MF_04032 ; rdf:type edam:operation_0300 . ?targetMotifMatch118 faldo:location ?targetMotifMatchRegionMatch119 ; edam:is_output_of ?targetMotifSequenceAlignmentOperationMF_04032121 ; rdf:type edam:data_0869 ; rdf:value ?targetMotifMatchCigarP10211MF_04032112 . ?targetMotifMatchRegionMatch119 faldo:begin ?targetMotifMatchRegionMatchBeginMF_04032120 . ?targetMotifMatchRegionMatchBeginMF_04032120 faldo:position ?targetMotifMatchRegionMatchBeginPositionMF_04032113 ; faldo:reference ?thisSequence . ?targetMotifSequenceAlignmentOperationMF_04032121 edam:has_input signature:MF_04032 ; rdf:type edam:operation_0300 . BIND(STRLEN(REPLACE(SUBSTR(?templateMotifCigarP10211MF_04032110, 1, (STRLEN(?templateMotifCigarP10211MF_04032110) - STRLEN(REPLACE(?templateMotifCigarP10211MF_04032110, CONCAT('^(?:-*[^-]){', STR(((775 - ?templateMotifSequenceMatchBeginPositionP10211111) + 1)), '}'), '')))), '[a-z]', '')) AS ?step1122) . BIND((STRLEN(SUBSTR(?targetMotifMatchCigarP10211MF_04032112, 1, (STRLEN(?targetMotifMatchCigarP10211MF_04032112) - STRLEN(REPLACE(?targetMotifMatchCigarP10211MF_04032112, CONCAT('^(?:[a-z]*(?:[A-Z]|-)){', STR(?step1122), '}'), ''))))) - STRLEN(REPLACE(SUBSTR(?targetMotifMatchCigarP10211MF_04032112, 1, (STRLEN(?targetMotifMatchCigarP10211MF_04032112) - STRLEN(REPLACE(?targetMotifMatchCigarP10211MF_04032112, CONCAT('^(?:[a-z]*(?:[A-Z]|-)){', STR(?step1122), '}'), '')))), '[^-]', ''))) AS ?step2123) . BIND(((?step2123 + ?targetMotifMatchRegionMatchBeginPositionMF_04032113) - 1) AS ?thisPositionOn20) . BIND(STRLEN(REPLACE(SUBSTR(?templateMotifCigarP10211MF_04032110, 1, (STRLEN(?templateMotifCigarP10211MF_04032110) - STRLEN(REPLACE(?templateMotifCigarP10211MF_04032110, CONCAT('^(?:-*[^-]){', STR(((795 - ?templateMotifSequenceMatchBeginPositionP10211111) + 1)), '}'), '')))), '[a-z]', '')) AS ?step1124) . BIND((STRLEN(SUBSTR(?targetMotifMatchCigarP10211MF_04032112, 1, (STRLEN(?targetMotifMatchCigarP10211MF_04032112) - STRLEN(REPLACE(?targetMotifMatchCigarP10211MF_04032112, CONCAT('^(?:[a-z]*(?:[A-Z]|-)){', STR(?step1124), '}'), ''))))) - STRLEN(REPLACE(SUBSTR(?targetMotifMatchCigarP10211MF_04032112, 1, (STRLEN(?targetMotifMatchCigarP10211MF_04032112) - STRLEN(REPLACE(?targetMotifMatchCigarP10211MF_04032112, CONCAT('^(?:[a-z]*(?:[A-Z]|-)){', STR(?step1124), '}'), '')))), '[^-]', ''))) AS ?step2125) . BIND(((?step2125 + ?targetMotifMatchRegionMatchBeginPositionMF_04032113) - 1) AS ?thisPositionOn21) . BIND(?this AS ?pfs1t126) . BIND(URI(CONCAT(STR(?thisSequence), '#position', STR(?thisPositionOn20))) AS ?pfsb18) . BIND(URI(CONCAT(STR(?thisSequence), '#position', STR(?thisPositionOn21))) AS ?pfse19) . FILTER ((BOUND(?thisPositionOn20) && BOUND(?thisPositionOn21))) . BIND(URI(CONCAT(STR(?this), '#MF_04032a17')) AS ?annotation17) . BIND(?this AS ?pfs16) . } OPTIONAL { ?this up:sequence ?thisSequence . ?thisSequence rdf:value ?thisSequenceValue . ?templateMotifMatch131 faldo:location ?templateMotifSequenceMatchRegionP10211132 ; edam:is_output_of ?templateMotifSequenceProfileAlignmentOperationP10211134 ; rdf:type edam:data_0869 ; rdf:value ?templateMotifCigarP10211MF_04032127 . ?templateMotifSequenceMatchRegionP10211132 faldo:begin ?templateMotifSequenceMatchBeginP10211133 . ?templateMotifSequenceMatchBeginP10211133 faldo:position ?templateMotifSequenceMatchBeginPositionP10211128 ; faldo:reference isoform:P10211-1 . ?templateMotifSequenceProfileAlignmentOperationP10211134 edam:has_input signature:MF_04032 ; rdf:type edam:operation_0300 . ?targetMotifMatch135 faldo:location ?targetMotifMatchRegionMatch136 ; edam:is_output_of ?targetMotifSequenceAlignmentOperationMF_04032138 ; rdf:type edam:data_0869 ; rdf:value ?targetMotifMatchCigarP10211MF_04032129 . ?targetMotifMatchRegionMatch136 faldo:begin ?targetMotifMatchRegionMatchBeginMF_04032137 . ?targetMotifMatchRegionMatchBeginMF_04032137 faldo:position ?targetMotifMatchRegionMatchBeginPositionMF_04032130 ; faldo:reference ?thisSequence . ?targetMotifSequenceAlignmentOperationMF_04032138 edam:has_input signature:MF_04032 ; rdf:type edam:operation_0300 . BIND(STRLEN(REPLACE(SUBSTR(?templateMotifCigarP10211MF_04032127, 1, (STRLEN(?templateMotifCigarP10211MF_04032127) - STRLEN(REPLACE(?templateMotifCigarP10211MF_04032127, CONCAT('^(?:-*[^-]){', STR(((796 - ?templateMotifSequenceMatchBeginPositionP10211128) + 1)), '}'), '')))), '[a-z]', '')) AS ?step1139) . BIND((STRLEN(SUBSTR(?targetMotifMatchCigarP10211MF_04032129, 1, (STRLEN(?targetMotifMatchCigarP10211MF_04032129) - STRLEN(REPLACE(?targetMotifMatchCigarP10211MF_04032129, CONCAT('^(?:[a-z]*(?:[A-Z]|-)){', STR(?step1139), '}'), ''))))) - STRLEN(REPLACE(SUBSTR(?targetMotifMatchCigarP10211MF_04032129, 1, (STRLEN(?targetMotifMatchCigarP10211MF_04032129) - STRLEN(REPLACE(?targetMotifMatchCigarP10211MF_04032129, CONCAT('^(?:[a-z]*(?:[A-Z]|-)){', STR(?step1139), '}'), '')))), '[^-]', ''))) AS ?step2140) . BIND(((?step2140 + ?targetMotifMatchRegionMatchBeginPositionMF_04032130) - 1) AS ?thisPositionOn26) . BIND(STRLEN(?thisSequenceValue) AS ?thisPositionOn27) . BIND(?this AS ?pfs1t141) . BIND(URI(CONCAT(STR(?thisSequence), '#position', STR(?thisPositionOn26))) AS ?pfsb24) . BIND(URI(CONCAT(STR(?thisSequence), '#position', STR(?thisPositionOn27))) AS ?pfse25) . FILTER ((BOUND(?thisPositionOn26) && BOUND(?thisPositionOn27))) . BIND(URI(CONCAT(STR(?this), '#MF_04032a23')) AS ?annotation23) . BIND(?this AS ?pfs22) . } OPTIONAL { ?this up:sequence ?thisSequence . ?thisSequence rdf:value ?thisSequenceValue . ?templateMotifMatch146 faldo:location ?templateMotifSequenceMatchRegionP10211147 ; edam:is_output_of ?templateMotifSequenceProfileAlignmentOperationP10211149 ; rdf:type edam:data_0869 ; rdf:value ?templateMotifCigarP10211MF_04032142 . ?templateMotifSequenceMatchRegionP10211147 faldo:begin ?templateMotifSequenceMatchBeginP10211148 . ?templateMotifSequenceMatchBeginP10211148 faldo:position ?templateMotifSequenceMatchBeginPositionP10211143 ; faldo:reference isoform:P10211-1 . ?templateMotifSequenceProfileAlignmentOperationP10211149 edam:has_input signature:MF_04032 ; rdf:type edam:operation_0300 . ?targetMotifMatch150 faldo:location ?targetMotifMatchRegionMatch151 ; edam:is_output_of ?targetMotifSequenceAlignmentOperationMF_04032153 ; rdf:type edam:data_0869 ; rdf:value ?targetMotifMatchCigarP10211MF_04032144 . ?targetMotifMatchRegionMatch151 faldo:begin ?targetMotifMatchRegionMatchBeginMF_04032152 . ?targetMotifMatchRegionMatchBeginMF_04032152 faldo:position ?targetMotifMatchRegionMatchBeginPositionMF_04032145 ; faldo:reference ?thisSequence . ?targetMotifSequenceAlignmentOperationMF_04032153 edam:has_input signature:MF_04032 ; rdf:type edam:operation_0300 . BIND(STRLEN(REPLACE(SUBSTR(?templateMotifCigarP10211MF_04032142, 1, (STRLEN(?templateMotifCigarP10211MF_04032142) - STRLEN(REPLACE(?templateMotifCigarP10211MF_04032142, CONCAT('^(?:-*[^-]){', STR(((173 - ?templateMotifSequenceMatchBeginPositionP10211143) + 1)), '}'), '')))), '[a-z]', '')) AS ?step1154) . BIND((STRLEN(SUBSTR(?targetMotifMatchCigarP10211MF_04032144, 1, (STRLEN(?targetMotifMatchCigarP10211MF_04032144) - STRLEN(REPLACE(?targetMotifMatchCigarP10211MF_04032144, CONCAT('^(?:[a-z]*(?:[A-Z]|-)){', STR(?step1154), '}'), ''))))) - STRLEN(REPLACE(SUBSTR(?targetMotifMatchCigarP10211MF_04032144, 1, (STRLEN(?targetMotifMatchCigarP10211MF_04032144) - STRLEN(REPLACE(?targetMotifMatchCigarP10211MF_04032144, CONCAT('^(?:[a-z]*(?:[A-Z]|-)){', STR(?step1154), '}'), '')))), '[^-]', ''))) AS ?step2155) . BIND(((?step2155 + ?targetMotifMatchRegionMatchBeginPositionMF_04032145) - 1) AS ?thisPositionOn32) . BIND(STRLEN(REPLACE(SUBSTR(?templateMotifCigarP10211MF_04032142, 1, (STRLEN(?templateMotifCigarP10211MF_04032142) - STRLEN(REPLACE(?templateMotifCigarP10211MF_04032142, CONCAT('^(?:-*[^-]){', STR(((179 - ?templateMotifSequenceMatchBeginPositionP10211143) + 1)), '}'), '')))), '[a-z]', '')) AS ?step1156) . BIND((STRLEN(SUBSTR(?targetMotifMatchCigarP10211MF_04032144, 1, (STRLEN(?targetMotifMatchCigarP10211MF_04032144) - STRLEN(REPLACE(?targetMotifMatchCigarP10211MF_04032144, CONCAT('^(?:[a-z]*(?:[A-Z]|-)){', STR(?step1156), '}'), ''))))) - STRLEN(REPLACE(SUBSTR(?targetMotifMatchCigarP10211MF_04032144, 1, (STRLEN(?targetMotifMatchCigarP10211MF_04032144) - STRLEN(REPLACE(?targetMotifMatchCigarP10211MF_04032144, CONCAT('^(?:[a-z]*(?:[A-Z]|-)){', STR(?step1156), '}'), '')))), '[^-]', ''))) AS ?step2157) . BIND(((?step2157 + ?targetMotifMatchRegionMatchBeginPositionMF_04032145) - 1) AS ?thisPositionOn33) . BIND(?this AS ?pfs1t158) . BIND(URI(CONCAT(STR(?thisSequence), '#position', STR(?thisPositionOn32))) AS ?pfsb30) . BIND(URI(CONCAT(STR(?thisSequence), '#position', STR(?thisPositionOn33))) AS ?pfse31) . FILTER ((BOUND(?thisPositionOn32) && BOUND(?thisPositionOn33))) . BIND(URI(CONCAT(STR(?this), '#MF_04032a29')) AS ?annotation29) . BIND(?this AS ?pfs28) . } OPTIONAL { ?this up:sequence ?thisSequence . ?thisSequence rdf:value ?thisSequenceValue . ?templateMotifMatch163 faldo:location ?templateMotifSequenceMatchRegionP10211164 ; edam:is_output_of ?templateMotifSequenceProfileAlignmentOperationP10211166 ; rdf:type edam:data_0869 ; rdf:value ?templateMotifCigarP10211MF_04032159 . ?templateMotifSequenceMatchRegionP10211164 faldo:begin ?templateMotifSequenceMatchBeginP10211165 . ?templateMotifSequenceMatchBeginP10211165 faldo:position ?templateMotifSequenceMatchBeginPositionP10211160 ; faldo:reference isoform:P10211-1 . ?templateMotifSequenceProfileAlignmentOperationP10211166 edam:has_input signature:MF_04032 ; rdf:type edam:operation_0300 . ?targetMotifMatch167 faldo:location ?targetMotifMatchRegionMatch168 ; edam:is_output_of ?targetMotifSequenceAlignmentOperationMF_04032170 ; rdf:type edam:data_0869 ; rdf:value ?targetMotifMatchCigarP10211MF_04032161 . ?targetMotifMatchRegionMatch168 faldo:begin ?targetMotifMatchRegionMatchBeginMF_04032169 . ?targetMotifMatchRegionMatchBeginMF_04032169 faldo:position ?targetMotifMatchRegionMatchBeginPositionMF_04032162 ; faldo:reference ?thisSequence . ?targetMotifSequenceAlignmentOperationMF_04032170 edam:has_input signature:MF_04032 ; rdf:type edam:operation_0300 . BIND(STRLEN(REPLACE(SUBSTR(?templateMotifCigarP10211MF_04032159, 1, (STRLEN(?templateMotifCigarP10211MF_04032159) - STRLEN(REPLACE(?templateMotifCigarP10211MF_04032159, CONCAT('^(?:-*[^-]){', STR(((258 - ?templateMotifSequenceMatchBeginPositionP10211160) + 1)), '}'), '')))), '[a-z]', '')) AS ?step1171) . BIND((STRLEN(SUBSTR(?targetMotifMatchCigarP10211MF_04032161, 1, (STRLEN(?targetMotifMatchCigarP10211MF_04032161) - STRLEN(REPLACE(?targetMotifMatchCigarP10211MF_04032161, CONCAT('^(?:[a-z]*(?:[A-Z]|-)){', STR(?step1171), '}'), ''))))) - STRLEN(REPLACE(SUBSTR(?targetMotifMatchCigarP10211MF_04032161, 1, (STRLEN(?targetMotifMatchCigarP10211MF_04032161) - STRLEN(REPLACE(?targetMotifMatchCigarP10211MF_04032161, CONCAT('^(?:[a-z]*(?:[A-Z]|-)){', STR(?step1171), '}'), '')))), '[^-]', ''))) AS ?step2172) . BIND(((?step2172 + ?targetMotifMatchRegionMatchBeginPositionMF_04032162) - 1) AS ?thisPositionOn38) . BIND(STRLEN(REPLACE(SUBSTR(?templateMotifCigarP10211MF_04032159, 1, (STRLEN(?templateMotifCigarP10211MF_04032159) - STRLEN(REPLACE(?templateMotifCigarP10211MF_04032159, CONCAT('^(?:-*[^-]){', STR(((265 - ?templateMotifSequenceMatchBeginPositionP10211160) + 1)), '}'), '')))), '[a-z]', '')) AS ?step1173) . BIND((STRLEN(SUBSTR(?targetMotifMatchCigarP10211MF_04032161, 1, (STRLEN(?targetMotifMatchCigarP10211MF_04032161) - STRLEN(REPLACE(?targetMotifMatchCigarP10211MF_04032161, CONCAT('^(?:[a-z]*(?:[A-Z]|-)){', STR(?step1173), '}'), ''))))) - STRLEN(REPLACE(SUBSTR(?targetMotifMatchCigarP10211MF_04032161, 1, (STRLEN(?targetMotifMatchCigarP10211MF_04032161) - STRLEN(REPLACE(?targetMotifMatchCigarP10211MF_04032161, CONCAT('^(?:[a-z]*(?:[A-Z]|-)){', STR(?step1173), '}'), '')))), '[^-]', ''))) AS ?step2174) . BIND(((?step2174 + ?targetMotifMatchRegionMatchBeginPositionMF_04032162) - 1) AS ?thisPositionOn39) . BIND(?this AS ?pfs1t175) . BIND(URI(CONCAT(STR(?thisSequence), '#position', STR(?thisPositionOn38))) AS ?pfsb36) . BIND(URI(CONCAT(STR(?thisSequence), '#position', STR(?thisPositionOn39))) AS ?pfse37) . FILTER ((BOUND(?thisPositionOn38) && BOUND(?thisPositionOn39))) . BIND(URI(CONCAT(STR(?this), '#MF_04032a35')) AS ?annotation35) . BIND(?this AS ?pfs34) . } OPTIONAL { ?this up:sequence ?thisSequence . ?thisSequence rdf:value ?thisSequenceValue . ?templateMotifMatch180 faldo:location ?templateMotifSequenceMatchRegionP10211181 ; edam:is_output_of ?templateMotifSequenceProfileAlignmentOperationP10211183 ; rdf:type edam:data_0869 ; rdf:value ?templateMotifCigarP10211MF_04032176 . ?templateMotifSequenceMatchRegionP10211181 faldo:begin ?templateMotifSequenceMatchBeginP10211182 . ?templateMotifSequenceMatchBeginP10211182 faldo:position ?templateMotifSequenceMatchBeginPositionP10211177 ; faldo:reference isoform:P10211-1 . ?templateMotifSequenceProfileAlignmentOperationP10211183 edam:has_input signature:MF_04032 ; rdf:type edam:operation_0300 . ?targetMotifMatch184 faldo:location ?targetMotifMatchRegionMatch185 ; edam:is_output_of ?targetMotifSequenceAlignmentOperationMF_04032187 ; rdf:type edam:data_0869 ; rdf:value ?targetMotifMatchCigarP10211MF_04032178 . ?targetMotifMatchRegionMatch185 faldo:begin ?targetMotifMatchRegionMatchBeginMF_04032186 . ?targetMotifMatchRegionMatchBeginMF_04032186 faldo:position ?targetMotifMatchRegionMatchBeginPositionMF_04032179 ; faldo:reference ?thisSequence . ?targetMotifSequenceAlignmentOperationMF_04032187 edam:has_input signature:MF_04032 ; rdf:type edam:operation_0300 . BIND(STRLEN(REPLACE(SUBSTR(?templateMotifCigarP10211MF_04032176, 1, (STRLEN(?templateMotifCigarP10211MF_04032176) - STRLEN(REPLACE(?templateMotifCigarP10211MF_04032176, CONCAT('^(?:-*[^-]){', STR(((719 - ?templateMotifSequenceMatchBeginPositionP10211177) + 1)), '}'), '')))), '[a-z]', '')) AS ?step1188) . BIND((STRLEN(SUBSTR(?targetMotifMatchCigarP10211MF_04032178, 1, (STRLEN(?targetMotifMatchCigarP10211MF_04032178) - STRLEN(REPLACE(?targetMotifMatchCigarP10211MF_04032178, CONCAT('^(?:[a-z]*(?:[A-Z]|-)){', STR(?step1188), '}'), ''))))) - STRLEN(REPLACE(SUBSTR(?targetMotifMatchCigarP10211MF_04032178, 1, (STRLEN(?targetMotifMatchCigarP10211MF_04032178) - STRLEN(REPLACE(?targetMotifMatchCigarP10211MF_04032178, CONCAT('^(?:[a-z]*(?:[A-Z]|-)){', STR(?step1188), '}'), '')))), '[^-]', ''))) AS ?step2189) . BIND(((?step2189 + ?targetMotifMatchRegionMatchBeginPositionMF_04032179) - 1) AS ?thisPositionOn44) . BIND(STRLEN(REPLACE(SUBSTR(?templateMotifCigarP10211MF_04032176, 1, (STRLEN(?templateMotifCigarP10211MF_04032176) - STRLEN(REPLACE(?templateMotifCigarP10211MF_04032176, CONCAT('^(?:-*[^-]){', STR(((772 - ?templateMotifSequenceMatchBeginPositionP10211177) + 1)), '}'), '')))), '[a-z]', '')) AS ?step1190) . BIND((STRLEN(SUBSTR(?targetMotifMatchCigarP10211MF_04032178, 1, (STRLEN(?targetMotifMatchCigarP10211MF_04032178) - STRLEN(REPLACE(?targetMotifMatchCigarP10211MF_04032178, CONCAT('^(?:[a-z]*(?:[A-Z]|-)){', STR(?step1190), '}'), ''))))) - STRLEN(REPLACE(SUBSTR(?targetMotifMatchCigarP10211MF_04032178, 1, (STRLEN(?targetMotifMatchCigarP10211MF_04032178) - STRLEN(REPLACE(?targetMotifMatchCigarP10211MF_04032178, CONCAT('^(?:[a-z]*(?:[A-Z]|-)){', STR(?step1190), '}'), '')))), '[^-]', ''))) AS ?step2191) . BIND(((?step2191 + ?targetMotifMatchRegionMatchBeginPositionMF_04032179) - 1) AS ?thisPositionOn45) . BIND(?this AS ?pfs1t192) . BIND(URI(CONCAT(STR(?thisSequence), '#position', STR(?thisPositionOn44))) AS ?pfsb42) . BIND(URI(CONCAT(STR(?thisSequence), '#position', STR(?thisPositionOn45))) AS ?pfse43) . FILTER ((BOUND(?thisPositionOn44) && BOUND(?thisPositionOn45))) . BIND(URI(CONCAT(STR(?this), '#MF_04032a41')) AS ?annotation41) . BIND(?this AS ?pfs40) . } OPTIONAL { ?this up:sequence ?thisSequence . ?thisSequence rdf:value ?thisSequenceValue . ?templateMotifMatch197 faldo:location ?templateMotifSequenceMatchRegionP10211198 ; edam:is_output_of ?templateMotifSequenceProfileAlignmentOperationP10211200 ; rdf:type edam:data_0869 ; rdf:value ?templateMotifCigarP10211MF_04032193 . ?templateMotifSequenceMatchRegionP10211198 faldo:begin ?templateMotifSequenceMatchBeginP10211199 . ?templateMotifSequenceMatchBeginP10211199 faldo:position ?templateMotifSequenceMatchBeginPositionP10211194 ; faldo:reference isoform:P10211-1 . ?templateMotifSequenceProfileAlignmentOperationP10211200 edam:has_input signature:MF_04032 ; rdf:type edam:operation_0300 . ?targetMotifMatch201 faldo:location ?targetMotifMatchRegionMatch202 ; edam:is_output_of ?targetMotifSequenceAlignmentOperationMF_04032204 ; rdf:type edam:data_0869 ; rdf:value ?targetMotifMatchCigarP10211MF_04032195 . ?targetMotifMatchRegionMatch202 faldo:begin ?targetMotifMatchRegionMatchBeginMF_04032203 . ?targetMotifMatchRegionMatchBeginMF_04032203 faldo:position ?targetMotifMatchRegionMatchBeginPositionMF_04032196 ; faldo:reference ?thisSequence . ?targetMotifSequenceAlignmentOperationMF_04032204 edam:has_input signature:MF_04032 ; rdf:type edam:operation_0300 . BIND(STRLEN(REPLACE(SUBSTR(?templateMotifCigarP10211MF_04032193, 1, (STRLEN(?templateMotifCigarP10211MF_04032193) - STRLEN(REPLACE(?templateMotifCigarP10211MF_04032193, CONCAT('^(?:-*[^-]){', STR(((849 - ?templateMotifSequenceMatchBeginPositionP10211194) + 1)), '}'), '')))), '[a-z]', '')) AS ?step1205) . BIND((STRLEN(SUBSTR(?targetMotifMatchCigarP10211MF_04032195, 1, (STRLEN(?targetMotifMatchCigarP10211MF_04032195) - STRLEN(REPLACE(?targetMotifMatchCigarP10211MF_04032195, CONCAT('^(?:[a-z]*(?:[A-Z]|-)){', STR(?step1205), '}'), ''))))) - STRLEN(REPLACE(SUBSTR(?targetMotifMatchCigarP10211MF_04032195, 1, (STRLEN(?targetMotifMatchCigarP10211MF_04032195) - STRLEN(REPLACE(?targetMotifMatchCigarP10211MF_04032195, CONCAT('^(?:[a-z]*(?:[A-Z]|-)){', STR(?step1205), '}'), '')))), '[^-]', ''))) AS ?step2206) . BIND(((?step2206 + ?targetMotifMatchRegionMatchBeginPositionMF_04032196) - 1) AS ?thisPositionOn50) . BIND(STRLEN(REPLACE(SUBSTR(?templateMotifCigarP10211MF_04032193, 1, (STRLEN(?templateMotifCigarP10211MF_04032193) - STRLEN(REPLACE(?templateMotifCigarP10211MF_04032193, CONCAT('^(?:-*[^-]){', STR(((852 - ?templateMotifSequenceMatchBeginPositionP10211194) + 1)), '}'), '')))), '[a-z]', '')) AS ?step1207) . BIND((STRLEN(SUBSTR(?targetMotifMatchCigarP10211MF_04032195, 1, (STRLEN(?targetMotifMatchCigarP10211MF_04032195) - STRLEN(REPLACE(?targetMotifMatchCigarP10211MF_04032195, CONCAT('^(?:[a-z]*(?:[A-Z]|-)){', STR(?step1207), '}'), ''))))) - STRLEN(REPLACE(SUBSTR(?targetMotifMatchCigarP10211MF_04032195, 1, (STRLEN(?targetMotifMatchCigarP10211MF_04032195) - STRLEN(REPLACE(?targetMotifMatchCigarP10211MF_04032195, CONCAT('^(?:[a-z]*(?:[A-Z]|-)){', STR(?step1207), '}'), '')))), '[^-]', ''))) AS ?step2208) . BIND(((?step2208 + ?targetMotifMatchRegionMatchBeginPositionMF_04032196) - 1) AS ?thisPositionOn51) . BIND(?this AS ?pfs1t209) . BIND(URI(CONCAT(STR(?thisSequence), '#position', STR(?thisPositionOn50))) AS ?pfsb48) . BIND(URI(CONCAT(STR(?thisSequence), '#position', STR(?thisPositionOn51))) AS ?pfse49) . FILTER (REGEX('Y[ARNDCQEGHILKMFPSTWYVBZJUOX][ARNDCQEGHILKMFPSTWYVBZJUOX][LM]', SUBSTR(?thisSequenceValue, ?thisPositionOn50, (?thisPositionOn51 - ?thisPositionOn50)))) . BIND(URI(CONCAT(STR(?this), '#MF_04032a47')) AS ?annotation47) . BIND(?this AS ?pfs46) . } OPTIONAL { ?this up:sequence ?thisSequence . ?thisSequence rdf:value ?thisSequenceValue . ?templateMotifMatch214 faldo:location ?templateMotifSequenceMatchRegionP10211215 ; edam:is_output_of ?templateMotifSequenceProfileAlignmentOperationP10211217 ; rdf:type edam:data_0869 ; rdf:value ?templateMotifCigarP10211MF_04032210 . ?templateMotifSequenceMatchRegionP10211215 faldo:begin ?templateMotifSequenceMatchBeginP10211216 . ?templateMotifSequenceMatchBeginP10211216 faldo:position ?templateMotifSequenceMatchBeginPositionP10211211 ; faldo:reference isoform:P10211-1 . ?templateMotifSequenceProfileAlignmentOperationP10211217 edam:has_input signature:MF_04032 ; rdf:type edam:operation_0300 . ?targetMotifMatch218 faldo:location ?targetMotifMatchRegionMatch219 ; edam:is_output_of ?targetMotifSequenceAlignmentOperationMF_04032221 ; rdf:type edam:data_0869 ; rdf:value ?targetMotifMatchCigarP10211MF_04032212 . ?targetMotifMatchRegionMatch219 faldo:begin ?targetMotifMatchRegionMatchBeginMF_04032220 . ?targetMotifMatchRegionMatchBeginMF_04032220 faldo:position ?targetMotifMatchRegionMatchBeginPositionMF_04032213 ; faldo:reference ?thisSequence . ?targetMotifSequenceAlignmentOperationMF_04032221 edam:has_input signature:MF_04032 ; rdf:type edam:operation_0300 . BIND(STRLEN(REPLACE(SUBSTR(?templateMotifCigarP10211MF_04032210, 1, (STRLEN(?templateMotifCigarP10211MF_04032210) - STRLEN(REPLACE(?templateMotifCigarP10211MF_04032210, CONCAT('^(?:-*[^-]){', STR(((889 - ?templateMotifSequenceMatchBeginPositionP10211211) + 1)), '}'), '')))), '[a-z]', '')) AS ?step1222) . BIND((STRLEN(SUBSTR(?targetMotifMatchCigarP10211MF_04032212, 1, (STRLEN(?targetMotifMatchCigarP10211MF_04032212) - STRLEN(REPLACE(?targetMotifMatchCigarP10211MF_04032212, CONCAT('^(?:[a-z]*(?:[A-Z]|-)){', STR(?step1222), '}'), ''))))) - STRLEN(REPLACE(SUBSTR(?targetMotifMatchCigarP10211MF_04032212, 1, (STRLEN(?targetMotifMatchCigarP10211MF_04032212) - STRLEN(REPLACE(?targetMotifMatchCigarP10211MF_04032212, CONCAT('^(?:[a-z]*(?:[A-Z]|-)){', STR(?step1222), '}'), '')))), '[^-]', ''))) AS ?step2223) . BIND(((?step2223 + ?targetMotifMatchRegionMatchBeginPositionMF_04032213) - 1) AS ?thisPositionOn56) . BIND(STRLEN(REPLACE(SUBSTR(?templateMotifCigarP10211MF_04032210, 1, (STRLEN(?templateMotifCigarP10211MF_04032210) - STRLEN(REPLACE(?templateMotifCigarP10211MF_04032210, CONCAT('^(?:-*[^-]){', STR(((892 - ?templateMotifSequenceMatchBeginPositionP10211211) + 1)), '}'), '')))), '[a-z]', '')) AS ?step1224) . BIND((STRLEN(SUBSTR(?targetMotifMatchCigarP10211MF_04032212, 1, (STRLEN(?targetMotifMatchCigarP10211MF_04032212) - STRLEN(REPLACE(?targetMotifMatchCigarP10211MF_04032212, CONCAT('^(?:[a-z]*(?:[A-Z]|-)){', STR(?step1224), '}'), ''))))) - STRLEN(REPLACE(SUBSTR(?targetMotifMatchCigarP10211MF_04032212, 1, (STRLEN(?targetMotifMatchCigarP10211MF_04032212) - STRLEN(REPLACE(?targetMotifMatchCigarP10211MF_04032212, CONCAT('^(?:[a-z]*(?:[A-Z]|-)){', STR(?step1224), '}'), '')))), '[^-]', ''))) AS ?step2225) . BIND(((?step2225 + ?targetMotifMatchRegionMatchBeginPositionMF_04032213) - 1) AS ?thisPositionOn57) . BIND(?this AS ?pfs1t226) . BIND(URI(CONCAT(STR(?thisSequence), '#position', STR(?thisPositionOn56))) AS ?pfsb54) . BIND(URI(CONCAT(STR(?thisSequence), '#position', STR(?thisPositionOn57))) AS ?pfse55) . FILTER (REGEX('Y[ARNDCQEGHILKMFPSTWYVBZJUOX][ARNDCQEGHILKMFPSTWYVBZJUOX][VL]', SUBSTR(?thisSequenceValue, ?thisPositionOn56, (?thisPositionOn57 - ?thisPositionOn56)))) . BIND(URI(CONCAT(STR(?this), '#MF_04032a53')) AS ?annotation53) . BIND(?this AS ?pfs52) . } OPTIONAL { ?this up:sequence ?thisSequence . ?thisSequence rdf:value ?thisSequenceValue . ?templateMotifMatch231 faldo:location ?templateMotifSequenceMatchRegionP10211232 ; edam:is_output_of ?templateMotifSequenceProfileAlignmentOperationP10211234 ; rdf:type edam:data_0869 ; rdf:value ?templateMotifCigarP10211MF_04032227 . ?templateMotifSequenceMatchRegionP10211232 faldo:begin ?templateMotifSequenceMatchBeginP10211233 . ?templateMotifSequenceMatchBeginP10211233 faldo:position ?templateMotifSequenceMatchBeginPositionP10211228 ; faldo:reference isoform:P10211-1 . ?templateMotifSequenceProfileAlignmentOperationP10211234 edam:has_input signature:MF_04032 ; rdf:type edam:operation_0300 . ?targetMotifMatch235 faldo:location ?targetMotifMatchRegionMatch236 ; edam:is_output_of ?targetMotifSequenceAlignmentOperationMF_04032238 ; rdf:type edam:data_0869 ; rdf:value ?targetMotifMatchCigarP10211MF_04032229 . ?targetMotifMatchRegionMatch236 faldo:begin ?targetMotifMatchRegionMatchBeginMF_04032237 . ?targetMotifMatchRegionMatchBeginMF_04032237 faldo:position ?targetMotifMatchRegionMatchBeginPositionMF_04032230 ; faldo:reference ?thisSequence . ?targetMotifSequenceAlignmentOperationMF_04032238 edam:has_input signature:MF_04032 ; rdf:type edam:operation_0300 . BIND(STRLEN(REPLACE(SUBSTR(?templateMotifCigarP10211MF_04032227, 1, (STRLEN(?templateMotifCigarP10211MF_04032227) - STRLEN(REPLACE(?templateMotifCigarP10211MF_04032227, CONCAT('^(?:-*[^-]){', STR(((116 - ?templateMotifSequenceMatchBeginPositionP10211228) + 1)), '}'), '')))), '[a-z]', '')) AS ?step1239) . BIND((STRLEN(SUBSTR(?targetMotifMatchCigarP10211MF_04032229, 1, (STRLEN(?targetMotifMatchCigarP10211MF_04032229) - STRLEN(REPLACE(?targetMotifMatchCigarP10211MF_04032229, CONCAT('^(?:[a-z]*(?:[A-Z]|-)){', STR(?step1239), '}'), ''))))) - STRLEN(REPLACE(SUBSTR(?targetMotifMatchCigarP10211MF_04032229, 1, (STRLEN(?targetMotifMatchCigarP10211MF_04032229) - STRLEN(REPLACE(?targetMotifMatchCigarP10211MF_04032229, CONCAT('^(?:[a-z]*(?:[A-Z]|-)){', STR(?step1239), '}'), '')))), '[^-]', ''))) AS ?step2240) . BIND(((?step2240 + ?targetMotifMatchRegionMatchBeginPositionMF_04032230) - 1) AS ?thisPositionOn62) . BIND(STRLEN(REPLACE(SUBSTR(?templateMotifCigarP10211MF_04032227, 1, (STRLEN(?templateMotifCigarP10211MF_04032227) - STRLEN(REPLACE(?templateMotifCigarP10211MF_04032227, CONCAT('^(?:-*[^-]){', STR(((573 - ?templateMotifSequenceMatchBeginPositionP10211228) + 1)), '}'), '')))), '[a-z]', '')) AS ?step1241) . BIND((STRLEN(SUBSTR(?targetMotifMatchCigarP10211MF_04032229, 1, (STRLEN(?targetMotifMatchCigarP10211MF_04032229) - STRLEN(REPLACE(?targetMotifMatchCigarP10211MF_04032229, CONCAT('^(?:[a-z]*(?:[A-Z]|-)){', STR(?step1241), '}'), ''))))) - STRLEN(REPLACE(SUBSTR(?targetMotifMatchCigarP10211MF_04032229, 1, (STRLEN(?targetMotifMatchCigarP10211MF_04032229) - STRLEN(REPLACE(?targetMotifMatchCigarP10211MF_04032229, CONCAT('^(?:[a-z]*(?:[A-Z]|-)){', STR(?step1241), '}'), '')))), '[^-]', ''))) AS ?step2242) . BIND(((?step2242 + ?targetMotifMatchRegionMatchBeginPositionMF_04032230) - 1) AS ?thisPositionOn63) . BIND(?this AS ?pfs1t243) . BIND(URI(CONCAT(STR(?thisSequence), '#position', STR(?thisPositionOn62))) AS ?pfsb60) . BIND(URI(CONCAT(STR(?thisSequence), '#position', STR(?thisPositionOn63))) AS ?pfse61) . FILTER (REGEX('C[ARNDCQEGHILKMFPSTWYVBZJUOX]*C', SUBSTR(?thisSequenceValue, ?thisPositionOn62, (?thisPositionOn63 - ?thisPositionOn62)))) . BIND(URI(CONCAT(STR(?this), '#MF_04032a59')) AS ?annotation59) . BIND(?this AS ?pfs58) . } OPTIONAL { ?this up:sequence ?thisSequence . ?thisSequence rdf:value ?thisSequenceValue . ?templateMotifMatch248 faldo:location ?templateMotifSequenceMatchRegionP10211249 ; edam:is_output_of ?templateMotifSequenceProfileAlignmentOperationP10211251 ; rdf:type edam:data_0869 ; rdf:value ?templateMotifCigarP10211MF_04032244 . ?templateMotifSequenceMatchRegionP10211249 faldo:begin ?templateMotifSequenceMatchBeginP10211250 . ?templateMotifSequenceMatchBeginP10211250 faldo:position ?templateMotifSequenceMatchBeginPositionP10211245 ; faldo:reference isoform:P10211-1 . ?templateMotifSequenceProfileAlignmentOperationP10211251 edam:has_input signature:MF_04032 ; rdf:type edam:operation_0300 . ?targetMotifMatch252 faldo:location ?targetMotifMatchRegionMatch253 ; edam:is_output_of ?targetMotifSequenceAlignmentOperationMF_04032255 ; rdf:type edam:data_0869 ; rdf:value ?targetMotifMatchCigarP10211MF_04032246 . ?targetMotifMatchRegionMatch253 faldo:begin ?targetMotifMatchRegionMatchBeginMF_04032254 . ?targetMotifMatchRegionMatchBeginMF_04032254 faldo:position ?targetMotifMatchRegionMatchBeginPositionMF_04032247 ; faldo:reference ?thisSequence . ?targetMotifSequenceAlignmentOperationMF_04032255 edam:has_input signature:MF_04032 ; rdf:type edam:operation_0300 . BIND(STRLEN(REPLACE(SUBSTR(?templateMotifCigarP10211MF_04032244, 1, (STRLEN(?templateMotifCigarP10211MF_04032244) - STRLEN(REPLACE(?templateMotifCigarP10211MF_04032244, CONCAT('^(?:-*[^-]){', STR(((133 - ?templateMotifSequenceMatchBeginPositionP10211245) + 1)), '}'), '')))), '[a-z]', '')) AS ?step1256) . BIND((STRLEN(SUBSTR(?targetMotifMatchCigarP10211MF_04032246, 1, (STRLEN(?targetMotifMatchCigarP10211MF_04032246) - STRLEN(REPLACE(?targetMotifMatchCigarP10211MF_04032246, CONCAT('^(?:[a-z]*(?:[A-Z]|-)){', STR(?step1256), '}'), ''))))) - STRLEN(REPLACE(SUBSTR(?targetMotifMatchCigarP10211MF_04032246, 1, (STRLEN(?targetMotifMatchCigarP10211MF_04032246) - STRLEN(REPLACE(?targetMotifMatchCigarP10211MF_04032246, CONCAT('^(?:[a-z]*(?:[A-Z]|-)){', STR(?step1256), '}'), '')))), '[^-]', ''))) AS ?step2257) . BIND(((?step2257 + ?targetMotifMatchRegionMatchBeginPositionMF_04032247) - 1) AS ?thisPositionOn68) . BIND(STRLEN(REPLACE(SUBSTR(?templateMotifCigarP10211MF_04032244, 1, (STRLEN(?templateMotifCigarP10211MF_04032244) - STRLEN(REPLACE(?templateMotifCigarP10211MF_04032244, CONCAT('^(?:-*[^-]){', STR(((529 - ?templateMotifSequenceMatchBeginPositionP10211245) + 1)), '}'), '')))), '[a-z]', '')) AS ?step1258) . BIND((STRLEN(SUBSTR(?targetMotifMatchCigarP10211MF_04032246, 1, (STRLEN(?targetMotifMatchCigarP10211MF_04032246) - STRLEN(REPLACE(?targetMotifMatchCigarP10211MF_04032246, CONCAT('^(?:[a-z]*(?:[A-Z]|-)){', STR(?step1258), '}'), ''))))) - STRLEN(REPLACE(SUBSTR(?targetMotifMatchCigarP10211MF_04032246, 1, (STRLEN(?targetMotifMatchCigarP10211MF_04032246) - STRLEN(REPLACE(?targetMotifMatchCigarP10211MF_04032246, CONCAT('^(?:[a-z]*(?:[A-Z]|-)){', STR(?step1258), '}'), '')))), '[^-]', ''))) AS ?step2259) . BIND(((?step2259 + ?targetMotifMatchRegionMatchBeginPositionMF_04032247) - 1) AS ?thisPositionOn69) . BIND(?this AS ?pfs1t260) . BIND(URI(CONCAT(STR(?thisSequence), '#position', STR(?thisPositionOn68))) AS ?pfsb66) . BIND(URI(CONCAT(STR(?thisSequence), '#position', STR(?thisPositionOn69))) AS ?pfse67) . FILTER (REGEX('C[ARNDCQEGHILKMFPSTWYVBZJUOX]*C', SUBSTR(?thisSequenceValue, ?thisPositionOn68, (?thisPositionOn69 - ?thisPositionOn68)))) . BIND(URI(CONCAT(STR(?this), '#MF_04032a65')) AS ?annotation65) . BIND(?this AS ?pfs64) . } OPTIONAL { ?this up:sequence ?thisSequence . ?thisSequence rdf:value ?thisSequenceValue . ?templateMotifMatch265 faldo:location ?templateMotifSequenceMatchRegionP10211266 ; edam:is_output_of ?templateMotifSequenceProfileAlignmentOperationP10211268 ; rdf:type edam:data_0869 ; rdf:value ?templateMotifCigarP10211MF_04032261 . ?templateMotifSequenceMatchRegionP10211266 faldo:begin ?templateMotifSequenceMatchBeginP10211267 . ?templateMotifSequenceMatchBeginP10211267 faldo:position ?templateMotifSequenceMatchBeginPositionP10211262 ; faldo:reference isoform:P10211-1 . ?templateMotifSequenceProfileAlignmentOperationP10211268 edam:has_input signature:MF_04032 ; rdf:type edam:operation_0300 . ?targetMotifMatch269 faldo:location ?targetMotifMatchRegionMatch270 ; edam:is_output_of ?targetMotifSequenceAlignmentOperationMF_04032272 ; rdf:type edam:data_0869 ; rdf:value ?targetMotifMatchCigarP10211MF_04032263 . ?targetMotifMatchRegionMatch270 faldo:begin ?targetMotifMatchRegionMatchBeginMF_04032271 . ?targetMotifMatchRegionMatchBeginMF_04032271 faldo:position ?targetMotifMatchRegionMatchBeginPositionMF_04032264 ; faldo:reference ?thisSequence . ?targetMotifSequenceAlignmentOperationMF_04032272 edam:has_input signature:MF_04032 ; rdf:type edam:operation_0300 . BIND(STRLEN(REPLACE(SUBSTR(?templateMotifCigarP10211MF_04032261, 1, (STRLEN(?templateMotifCigarP10211MF_04032261) - STRLEN(REPLACE(?templateMotifCigarP10211MF_04032261, CONCAT('^(?:-*[^-]){', STR(((207 - ?templateMotifSequenceMatchBeginPositionP10211262) + 1)), '}'), '')))), '[a-z]', '')) AS ?step1273) . BIND((STRLEN(SUBSTR(?targetMotifMatchCigarP10211MF_04032263, 1, (STRLEN(?targetMotifMatchCigarP10211MF_04032263) - STRLEN(REPLACE(?targetMotifMatchCigarP10211MF_04032263, CONCAT('^(?:[a-z]*(?:[A-Z]|-)){', STR(?step1273), '}'), ''))))) - STRLEN(REPLACE(SUBSTR(?targetMotifMatchCigarP10211MF_04032263, 1, (STRLEN(?targetMotifMatchCigarP10211MF_04032263) - STRLEN(REPLACE(?targetMotifMatchCigarP10211MF_04032263, CONCAT('^(?:[a-z]*(?:[A-Z]|-)){', STR(?step1273), '}'), '')))), '[^-]', ''))) AS ?step2274) . BIND(((?step2274 + ?targetMotifMatchRegionMatchBeginPositionMF_04032264) - 1) AS ?thisPositionOn74) . BIND(STRLEN(REPLACE(SUBSTR(?templateMotifCigarP10211MF_04032261, 1, (STRLEN(?templateMotifCigarP10211MF_04032261) - STRLEN(REPLACE(?templateMotifCigarP10211MF_04032261, CONCAT('^(?:-*[^-]){', STR(((271 - ?templateMotifSequenceMatchBeginPositionP10211262) + 1)), '}'), '')))), '[a-z]', '')) AS ?step1275) . BIND((STRLEN(SUBSTR(?targetMotifMatchCigarP10211MF_04032263, 1, (STRLEN(?targetMotifMatchCigarP10211MF_04032263) - STRLEN(REPLACE(?targetMotifMatchCigarP10211MF_04032263, CONCAT('^(?:[a-z]*(?:[A-Z]|-)){', STR(?step1275), '}'), ''))))) - STRLEN(REPLACE(SUBSTR(?targetMotifMatchCigarP10211MF_04032263, 1, (STRLEN(?targetMotifMatchCigarP10211MF_04032263) - STRLEN(REPLACE(?targetMotifMatchCigarP10211MF_04032263, CONCAT('^(?:[a-z]*(?:[A-Z]|-)){', STR(?step1275), '}'), '')))), '[^-]', ''))) AS ?step2276) . BIND(((?step2276 + ?targetMotifMatchRegionMatchBeginPositionMF_04032264) - 1) AS ?thisPositionOn75) . BIND(?this AS ?pfs1t277) . BIND(URI(CONCAT(STR(?thisSequence), '#position', STR(?thisPositionOn74))) AS ?pfsb72) . BIND(URI(CONCAT(STR(?thisSequence), '#position', STR(?thisPositionOn75))) AS ?pfse73) . FILTER (REGEX('C[ARNDCQEGHILKMFPSTWYVBZJUOX]*C', SUBSTR(?thisSequenceValue, ?thisPositionOn74, (?thisPositionOn75 - ?thisPositionOn74)))) . BIND(URI(CONCAT(STR(?this), '#MF_04032a71')) AS ?annotation71) . BIND(?this AS ?pfs70) . } OPTIONAL { ?this up:sequence ?thisSequence . ?thisSequence rdf:value ?thisSequenceValue . ?templateMotifMatch282 faldo:location ?templateMotifSequenceMatchRegionP10211283 ; edam:is_output_of ?templateMotifSequenceProfileAlignmentOperationP10211285 ; rdf:type edam:data_0869 ; rdf:value ?templateMotifCigarP10211MF_04032278 . ?templateMotifSequenceMatchRegionP10211283 faldo:begin ?templateMotifSequenceMatchBeginP10211284 . ?templateMotifSequenceMatchBeginP10211284 faldo:position ?templateMotifSequenceMatchBeginPositionP10211279 ; faldo:reference isoform:P10211-1 . ?templateMotifSequenceProfileAlignmentOperationP10211285 edam:has_input signature:MF_04032 ; rdf:type edam:operation_0300 . ?targetMotifMatch286 faldo:location ?targetMotifMatchRegionMatch287 ; edam:is_output_of ?targetMotifSequenceAlignmentOperationMF_04032289 ; rdf:type edam:data_0869 ; rdf:value ?targetMotifMatchCigarP10211MF_04032280 . ?targetMotifMatchRegionMatch287 faldo:begin ?targetMotifMatchRegionMatchBeginMF_04032288 . ?targetMotifMatchRegionMatchBeginMF_04032288 faldo:position ?targetMotifMatchRegionMatchBeginPositionMF_04032281 ; faldo:reference ?thisSequence . ?targetMotifSequenceAlignmentOperationMF_04032289 edam:has_input signature:MF_04032 ; rdf:type edam:operation_0300 . BIND(STRLEN(REPLACE(SUBSTR(?templateMotifCigarP10211MF_04032278, 1, (STRLEN(?templateMotifCigarP10211MF_04032278) - STRLEN(REPLACE(?templateMotifCigarP10211MF_04032278, CONCAT('^(?:-*[^-]){', STR(((364 - ?templateMotifSequenceMatchBeginPositionP10211279) + 1)), '}'), '')))), '[a-z]', '')) AS ?step1290) . BIND((STRLEN(SUBSTR(?targetMotifMatchCigarP10211MF_04032280, 1, (STRLEN(?targetMotifMatchCigarP10211MF_04032280) - STRLEN(REPLACE(?targetMotifMatchCigarP10211MF_04032280, CONCAT('^(?:[a-z]*(?:[A-Z]|-)){', STR(?step1290), '}'), ''))))) - STRLEN(REPLACE(SUBSTR(?targetMotifMatchCigarP10211MF_04032280, 1, (STRLEN(?targetMotifMatchCigarP10211MF_04032280) - STRLEN(REPLACE(?targetMotifMatchCigarP10211MF_04032280, CONCAT('^(?:[a-z]*(?:[A-Z]|-)){', STR(?step1290), '}'), '')))), '[^-]', ''))) AS ?step2291) . BIND(((?step2291 + ?targetMotifMatchRegionMatchBeginPositionMF_04032281) - 1) AS ?thisPositionOn80) . BIND(STRLEN(REPLACE(SUBSTR(?templateMotifCigarP10211MF_04032278, 1, (STRLEN(?templateMotifCigarP10211MF_04032278) - STRLEN(REPLACE(?templateMotifCigarP10211MF_04032278, CONCAT('^(?:-*[^-]){', STR(((412 - ?templateMotifSequenceMatchBeginPositionP10211279) + 1)), '}'), '')))), '[a-z]', '')) AS ?step1292) . BIND((STRLEN(SUBSTR(?targetMotifMatchCigarP10211MF_04032280, 1, (STRLEN(?targetMotifMatchCigarP10211MF_04032280) - STRLEN(REPLACE(?targetMotifMatchCigarP10211MF_04032280, CONCAT('^(?:[a-z]*(?:[A-Z]|-)){', STR(?step1292), '}'), ''))))) - STRLEN(REPLACE(SUBSTR(?targetMotifMatchCigarP10211MF_04032280, 1, (STRLEN(?targetMotifMatchCigarP10211MF_04032280) - STRLEN(REPLACE(?targetMotifMatchCigarP10211MF_04032280, CONCAT('^(?:[a-z]*(?:[A-Z]|-)){', STR(?step1292), '}'), '')))), '[^-]', ''))) AS ?step2293) . BIND(((?step2293 + ?targetMotifMatchRegionMatchBeginPositionMF_04032281) - 1) AS ?thisPositionOn81) . BIND(?this AS ?pfs1t294) . BIND(URI(CONCAT(STR(?thisSequence), '#position', STR(?thisPositionOn80))) AS ?pfsb78) . BIND(URI(CONCAT(STR(?thisSequence), '#position', STR(?thisPositionOn81))) AS ?pfse79) . FILTER (REGEX('C[ARNDCQEGHILKMFPSTWYVBZJUOX]*C', SUBSTR(?thisSequenceValue, ?thisPositionOn80, (?thisPositionOn81 - ?thisPositionOn80)))) . BIND(URI(CONCAT(STR(?this), '#MF_04032a77')) AS ?annotation77) . BIND(?this AS ?pfs76) . } OPTIONAL { ?this up:sequence ?thisSequence . ?thisSequence rdf:value ?thisSequenceValue . ?templateMotifMatch299 faldo:location ?templateMotifSequenceMatchRegionP10211300 ; edam:is_output_of ?templateMotifSequenceProfileAlignmentOperationP10211302 ; rdf:type edam:data_0869 ; rdf:value ?templateMotifCigarP10211MF_04032295 . ?templateMotifSequenceMatchRegionP10211300 faldo:begin ?templateMotifSequenceMatchBeginP10211301 . ?templateMotifSequenceMatchBeginP10211301 faldo:position ?templateMotifSequenceMatchBeginPositionP10211296 ; faldo:reference isoform:P10211-1 . ?templateMotifSequenceProfileAlignmentOperationP10211302 edam:has_input signature:MF_04032 ; rdf:type edam:operation_0300 . ?targetMotifMatch303 faldo:location ?targetMotifMatchRegionMatch304 ; edam:is_output_of ?targetMotifSequenceAlignmentOperationMF_04032306 ; rdf:type edam:data_0869 ; rdf:value ?targetMotifMatchCigarP10211MF_04032297 . ?targetMotifMatchRegionMatch304 faldo:begin ?targetMotifMatchRegionMatchBeginMF_04032305 . ?targetMotifMatchRegionMatchBeginMF_04032305 faldo:position ?targetMotifMatchRegionMatchBeginPositionMF_04032298 ; faldo:reference ?thisSequence . ?targetMotifSequenceAlignmentOperationMF_04032306 edam:has_input signature:MF_04032 ; rdf:type edam:operation_0300 . BIND(STRLEN(REPLACE(SUBSTR(?templateMotifCigarP10211MF_04032295, 1, (STRLEN(?templateMotifCigarP10211MF_04032295) - STRLEN(REPLACE(?templateMotifCigarP10211MF_04032295, CONCAT('^(?:-*[^-]){', STR(((596 - ?templateMotifSequenceMatchBeginPositionP10211296) + 1)), '}'), '')))), '[a-z]', '')) AS ?step1307) . BIND((STRLEN(SUBSTR(?targetMotifMatchCigarP10211MF_04032297, 1, (STRLEN(?targetMotifMatchCigarP10211MF_04032297) - STRLEN(REPLACE(?targetMotifMatchCigarP10211MF_04032297, CONCAT('^(?:[a-z]*(?:[A-Z]|-)){', STR(?step1307), '}'), ''))))) - STRLEN(REPLACE(SUBSTR(?targetMotifMatchCigarP10211MF_04032297, 1, (STRLEN(?targetMotifMatchCigarP10211MF_04032297) - STRLEN(REPLACE(?targetMotifMatchCigarP10211MF_04032297, CONCAT('^(?:[a-z]*(?:[A-Z]|-)){', STR(?step1307), '}'), '')))), '[^-]', ''))) AS ?step2308) . BIND(((?step2308 + ?targetMotifMatchRegionMatchBeginPositionMF_04032298) - 1) AS ?thisPositionOn86) . BIND(STRLEN(REPLACE(SUBSTR(?templateMotifCigarP10211MF_04032295, 1, (STRLEN(?templateMotifCigarP10211MF_04032295) - STRLEN(REPLACE(?templateMotifCigarP10211MF_04032295, CONCAT('^(?:-*[^-]){', STR(((633 - ?templateMotifSequenceMatchBeginPositionP10211296) + 1)), '}'), '')))), '[a-z]', '')) AS ?step1309) . BIND((STRLEN(SUBSTR(?targetMotifMatchCigarP10211MF_04032297, 1, (STRLEN(?targetMotifMatchCigarP10211MF_04032297) - STRLEN(REPLACE(?targetMotifMatchCigarP10211MF_04032297, CONCAT('^(?:[a-z]*(?:[A-Z]|-)){', STR(?step1309), '}'), ''))))) - STRLEN(REPLACE(SUBSTR(?targetMotifMatchCigarP10211MF_04032297, 1, (STRLEN(?targetMotifMatchCigarP10211MF_04032297) - STRLEN(REPLACE(?targetMotifMatchCigarP10211MF_04032297, CONCAT('^(?:[a-z]*(?:[A-Z]|-)){', STR(?step1309), '}'), '')))), '[^-]', ''))) AS ?step2310) . BIND(((?step2310 + ?targetMotifMatchRegionMatchBeginPositionMF_04032298) - 1) AS ?thisPositionOn87) . BIND(?this AS ?pfs1t311) . BIND(URI(CONCAT(STR(?thisSequence), '#position', STR(?thisPositionOn86))) AS ?pfsb84) . BIND(URI(CONCAT(STR(?thisSequence), '#position', STR(?thisPositionOn87))) AS ?pfse85) . FILTER (REGEX('C[ARNDCQEGHILKMFPSTWYVBZJUOX]*C', SUBSTR(?thisSequenceValue, ?thisPositionOn86, (?thisPositionOn87 - ?thisPositionOn86)))) . BIND(URI(CONCAT(STR(?this), '#MF_04032a83')) AS ?annotation83) . BIND(?this AS ?pfs82) . } OPTIONAL { ?this up:annotation ?samsignal312 ; up:sequence ?thisSequence . ?samsignal312 up:range ?samsignalr313 ; rdf:type up:Signal_Peptide_Annotation . ?samsignalr313 faldo:begin ?samsignalb314 ; faldo:end ?samsignale315 . ?samsignalb314 faldo:position ?samsignalbp316 ; faldo:reference ?thisSequence . ?samsignale315 faldo:position ?samsignalep317 ; faldo:reference ?thisSequence . BIND(?this AS ?sam88) . } BIND(URI(CONCAT(STR(?this), '#MF_04032a94')) AS ?keyword94) . }