CONSTRUCT { _:928004 up:source unirule:MF_04072 . _:928005 up:source unirule:MF_04072 . _:928006 up:source unirule:MF_04072 . _:928007 up:source unirule:MF_04072 . _:928008 up:source unirule:MF_04072 . _:928009 up:source unirule:MF_04072 . _:928010 up:source unirule:MF_04072 . _:928011 up:source unirule:MF_04072 . _:928012 up:source unirule:MF_04072 . _:928013 up:source unirule:MF_04072 . _:928014 up:source unirule:MF_04072 . _:928015 up:source unirule:MF_04072 . _:928016 up:source unirule:MF_04072 . _:928017 up:source unirule:MF_04072 . _:928018 up:source unirule:MF_04072 . _:928019 up:source unirule:MF_04072 . _:928020 up:source unirule:MF_04072 . _:928021 up:source unirule:MF_04072 . _:928022 up:source unirule:MF_04072 . _:928023 up:source unirule:MF_04072 . _:928024 up:source unirule:MF_04072 . _:928025 up:source unirule:MF_04072 . _:928026 up:source unirule:MF_04072 . _:928027 up:source unirule:MF_04072 . _:928028 up:source unirule:MF_04072 . _:928029 up:fullName 'Hemagglutinin HA1 chain' ; rdf:type up:Structured_Name . _:928030 up:source unirule:MF_04072 . _:928031 up:fullName 'Hemagglutinin HA2 chain' ; rdf:type up:Structured_Name . _:928032 up:source unirule:MF_04072 . _:928033 up:fullName 'Hemagglutinin-esterase-fusion glycoprotein chain 1' ; up:shortName 'HEF1' ; rdf:type up:Structured_Name . _:928034 up:source unirule:MF_04072 . _:928035 up:fullName 'Hemagglutinin-esterase-fusion glycoprotein chain 2' ; up:shortName 'HEF2' ; rdf:type up:Structured_Name . _:928036 up:source unirule:MF_04072 . _:928037 up:source unirule:MF_04072 . _:928038 up:source unirule:MF_04072 . _:928039 up:source unirule:MF_04072 . _:928040 up:source unirule:MF_04072 . _:928041 up:source unirule:MF_04072 . _:928042 up:source unirule:MF_04072 . _:928043 up:source unirule:MF_04072 . _:928044 up:source unirule:MF_04072 . _:928045 up:source unirule:MF_04072 . _:928046 up:source unirule:MF_04072 . _:928047 up:source unirule:MF_04072 . _:928048 up:source unirule:MF_04072 . _:928049 up:source unirule:MF_04072 . _:928050 up:source unirule:MF_04072 . _:928051 up:source unirule:MF_04072 . _:928052 up:source unirule:MF_04072 . _:928053 up:source unirule:MF_04072 . _:928054 up:source unirule:MF_04072 . _:928055 up:source unirule:MF_04072 . _:928056 up:source unirule:MF_04072 . _:928057 up:source unirule:MF_04072 . _:928058 up:source unirule:MF_04072 . _:928059 up:source unirule:MF_04072 . _:928060 up:source unirule:MF_04072 . _:928061 up:source unirule:MF_04072 . _:928062 up:source unirule:MF_04072 . _:928063 up:source unirule:MF_04072 . _:928064 up:source unirule:MF_04072 . _:928065 up:source unirule:MF_04072 . _:928066 up:source unirule:MF_04072 . _:928067 up:source unirule:MF_04072 . _:928068 up:source unirule:MF_04072 . _:928069 up:source unirule:MF_04072 . _:928070 up:source unirule:MF_04072 . _:928071 up:source unirule:MF_04072 . _:928072 up:source unirule:MF_04072 . _:928073 up:source unirule:MF_04072 . _:928074 up:source unirule:MF_04072 . _:928075 up:source unirule:MF_04072 . _:928076 up:source unirule:MF_04072 . _:928077 up:source unirule:MF_04072 . ?this up:annotation ?annotation0 ; up:classifiedWith GO:0016020 , GO:0019031 , GO:0020002 , GO:0039654 , GO:0046761 , GO:0046789 , keyword:1015 , keyword:1032 , keyword:1043 , keyword:1133 , keyword:1160 , keyword:1161 , keyword:1162 , keyword:1164 , keyword:1168 , keyword:1170 , keyword:261 , keyword:325 , keyword:348 , keyword:472 , keyword:732 , keyword:812 , keyword:945 , keyword:946 ; up:component ?namedpart1 , ?namedpart2 , ?namedpart3 , ?namedpart4 . ?annotation0 a up:Similarity_Annotation ; rdfs:comment 'Belongs to the influenza viruses hemagglutinin family.' . ?namedpart1 up:recommendedName _:928029 . ?namedpart2 up:recommendedName _:928031 . ?namedpart3 up:recommendedName _:928033 . ?namedpart4 up:recommendedName _:928035 . ?case6 up:classifiedWith GO:0075512 , keyword:1165 , keyword:1167 . ?case7 up:classifiedWith keyword:378 . ?case8 up:classifiedWith keyword:449 , keyword:564 . ?case9 up:precursor "true"^^xsd:boolean ; up:recommendedName ?name10 . ?name10 up:ecName '3.1.1.53' ; up:fullName 'Hemagglutinin-esterase-fusion glycoprotein' ; up:shortName 'HEF' ; rdf:type up:Structured_Name . ?pfs11 up:annotation ?annotation12 . ?annotation12 faldo:begin ?pfsb13 ; faldo:end ?pfse14 ; rdf:type up:Chain_Annotation ; rdfs:comment 'Hemagglutinin HA1 chain' . ?pfsb13 faldo:position ?thisPositionOn15 ; rdf:type faldo:ExactPosition . ?pfse14 faldo:position ?thisPositionOn16 ; rdf:type faldo:ExactPosition . ?pfs17 up:annotation ?annotation18 . ?annotation18 faldo:begin ?pfsb19 ; faldo:end ?pfse20 ; rdf:type up:Chain_Annotation ; rdfs:comment 'Hemagglutinin HA2 chain' . ?pfsb19 faldo:position ?thisPositionOn21 ; rdf:type faldo:ExactPosition . ?pfse20 faldo:position ?thisPositionOn22 ; rdf:type faldo:ExactPosition . ?pfs23 up:annotation ?annotation24 . ?annotation24 faldo:begin ?pfsb25 ; faldo:end ?pfse26 ; rdf:type up:Site_Annotation ; rdfs:comment 'Cleavage; by host' . ?pfsb25 faldo:position ?thisPositionOn27 ; rdf:type faldo:ExactPosition . ?pfse26 faldo:position ?thisPositionOn28 ; rdf:type faldo:ExactPosition . ?pfs29 up:annotation ?annotation30 . ?annotation30 faldo:begin ?pfsb31 ; faldo:end ?pfse32 ; rdf:type up:Lipidation_Annotation ; rdfs:comment 'S-palmitoyl cysteine; by host' . ?pfsb31 faldo:position ?thisPositionOn33 ; rdf:type faldo:ExactPosition . ?pfse32 faldo:position ?thisPositionOn34 ; rdf:type faldo:ExactPosition . ?pfs35 up:annotation ?annotation36 . ?annotation36 faldo:begin ?pfsb37 ; faldo:end ?pfse38 ; rdf:type up:Lipidation_Annotation ; rdfs:comment 'S-palmitoyl cysteine; by host' . ?pfsb37 faldo:position ?thisPositionOn39 ; rdf:type faldo:ExactPosition . ?pfse38 faldo:position ?thisPositionOn40 ; rdf:type faldo:ExactPosition . ?pfs41 up:annotation ?annotation42 . ?annotation42 faldo:begin ?pfsb43 ; faldo:end ?pfse44 ; rdf:type up:Lipidation_Annotation ; rdfs:comment 'S-palmitoyl cysteine; by host' . ?pfsb43 faldo:position ?thisPositionOn45 ; rdf:type faldo:ExactPosition . ?pfse44 faldo:position ?thisPositionOn46 ; rdf:type faldo:ExactPosition . ?pfs47 up:annotation ?annotation48 . ?annotation48 faldo:begin ?pfsb49 ; faldo:end ?pfse50 ; rdf:type up:Disulfide_Bond_Annotation ; rdfs:comment 'Interchain (between HA1 and HA2 chains)' . ?pfsb49 faldo:position ?thisPositionOn51 ; rdf:type faldo:ExactPosition . ?pfse50 faldo:position ?thisPositionOn52 ; rdf:type faldo:ExactPosition . ?pfs53 up:annotation ?annotation54 . ?annotation54 faldo:begin ?pfsb55 ; faldo:end ?pfse56 ; rdf:type up:Disulfide_Bond_Annotation . ?pfsb55 faldo:position ?thisPositionOn57 ; rdf:type faldo:ExactPosition . ?pfse56 faldo:position ?thisPositionOn58 ; rdf:type faldo:ExactPosition . ?pfs59 up:annotation ?annotation60 . ?annotation60 faldo:begin ?pfsb61 ; faldo:end ?pfse62 ; rdf:type up:Disulfide_Bond_Annotation . ?pfsb61 faldo:position ?thisPositionOn63 ; rdf:type faldo:ExactPosition . ?pfse62 faldo:position ?thisPositionOn64 ; rdf:type faldo:ExactPosition . ?pfs65 up:annotation ?annotation66 . ?annotation66 faldo:begin ?pfsb67 ; faldo:end ?pfse68 ; rdf:type up:Disulfide_Bond_Annotation . ?pfsb67 faldo:position ?thisPositionOn69 ; rdf:type faldo:ExactPosition . ?pfse68 faldo:position ?thisPositionOn70 ; rdf:type faldo:ExactPosition . ?pfs71 up:annotation ?annotation72 . ?annotation72 faldo:begin ?pfsb73 ; faldo:end ?pfse74 ; rdf:type up:Disulfide_Bond_Annotation . ?pfsb73 faldo:position ?thisPositionOn75 ; rdf:type faldo:ExactPosition . ?pfse74 faldo:position ?thisPositionOn76 ; rdf:type faldo:ExactPosition . ?pfs77 up:annotation ?annotation78 . ?annotation78 faldo:begin ?pfsb79 ; faldo:end ?pfse80 ; rdf:type up:Disulfide_Bond_Annotation . ?pfsb79 faldo:position ?thisPositionOn81 ; rdf:type faldo:ExactPosition . ?pfse80 faldo:position ?thisPositionOn82 ; rdf:type faldo:ExactPosition . ?pfs83 up:annotation ?annotation84 . ?annotation84 faldo:begin ?pfsb85 ; faldo:end ?pfse86 ; rdf:type up:Chain_Annotation ; rdfs:comment 'Hemagglutinin-esterase-fusion glycoprotein chain 1' . ?pfsb85 faldo:position ?thisPositionOn87 ; rdf:type faldo:ExactPosition . ?pfse86 faldo:position ?thisPositionOn88 ; rdf:type faldo:ExactPosition . ?pfs89 up:annotation ?annotation90 . ?annotation90 faldo:begin ?pfsb91 ; faldo:end ?pfse92 ; rdf:type up:Chain_Annotation ; rdfs:comment 'Hemagglutinin-esterase-fusion glycoprotein chain 2' . ?pfsb91 faldo:position ?thisPositionOn93 ; rdf:type faldo:ExactPosition . ?pfse92 faldo:position ?thisPositionOn94 ; rdf:type faldo:ExactPosition . ?pfs95 up:annotation ?annotation96 . ?annotation96 faldo:begin ?pfsb97 ; faldo:end ?pfse98 ; rdf:type up:Region_Annotation ; rdfs:comment 'Fusion domain-1' . ?pfsb97 faldo:position ?thisPositionOn99 ; rdf:type faldo:ExactPosition . ?pfse98 faldo:position ?thisPositionOn100 ; rdf:type faldo:ExactPosition . ?pfs101 up:annotation ?annotation102 . ?annotation102 faldo:begin ?pfsb103 ; faldo:end ?pfse104 ; rdf:type up:Region_Annotation ; rdfs:comment 'Esterase domain-1' . ?pfsb103 faldo:position ?thisPositionOn105 ; rdf:type faldo:ExactPosition . ?pfse104 faldo:position ?thisPositionOn106 ; rdf:type faldo:ExactPosition . ?pfs107 up:annotation ?annotation108 . ?annotation108 faldo:begin ?pfsb109 ; faldo:end ?pfse110 ; rdf:type up:Region_Annotation ; rdfs:comment 'N-acetyl-9-O-acetylneuraminic acid binding' . ?pfsb109 faldo:position ?thisPositionOn111 ; rdf:type faldo:ExactPosition . ?pfse110 faldo:position ?thisPositionOn112 ; rdf:type faldo:ExactPosition . ?pfs113 up:annotation ?annotation114 . ?annotation114 faldo:begin ?pfsb115 ; faldo:end ?pfse116 ; rdf:type up:Region_Annotation ; rdfs:comment 'Esterase domain-2' . ?pfsb115 faldo:position ?thisPositionOn117 ; rdf:type faldo:ExactPosition . ?pfse116 faldo:position ?thisPositionOn118 ; rdf:type faldo:ExactPosition . ?pfs119 up:annotation ?annotation120 . ?annotation120 faldo:begin ?pfsb121 ; faldo:end ?pfse122 ; rdf:type up:Region_Annotation ; rdfs:comment 'Fusion domain-2' . ?pfsb121 faldo:position ?thisPositionOn123 ; rdf:type faldo:ExactPosition . ?pfse122 faldo:position ?thisPositionOn124 ; rdf:type faldo:ExactPosition . ?pfs125 up:annotation ?annotation126 . ?annotation126 faldo:begin ?pfsb127 ; faldo:end ?pfse128 ; rdf:type up:Active_Site_Annotation ; rdfs:comment 'Nucleophile' . ?pfsb127 faldo:position ?thisPositionOn129 ; rdf:type faldo:ExactPosition . ?pfse128 faldo:position ?thisPositionOn130 ; rdf:type faldo:ExactPosition . ?pfs131 up:annotation ?annotation132 . ?annotation132 faldo:begin ?pfsb133 ; faldo:end ?pfse134 ; rdf:type up:Active_Site_Annotation ; rdfs:comment 'Charge relay system' . ?pfsb133 faldo:position ?thisPositionOn135 ; rdf:type faldo:ExactPosition . ?pfse134 faldo:position ?thisPositionOn136 ; rdf:type faldo:ExactPosition . ?pfs137 up:annotation ?annotation138 . ?annotation138 faldo:begin ?pfsb139 ; faldo:end ?pfse140 ; rdf:type up:Active_Site_Annotation ; rdfs:comment 'Charge relay system' . ?pfsb139 faldo:position ?thisPositionOn141 ; rdf:type faldo:ExactPosition . ?pfse140 faldo:position ?thisPositionOn142 ; rdf:type faldo:ExactPosition . ?pfs143 up:annotation ?annotation144 . ?annotation144 faldo:begin ?pfsb145 ; faldo:end ?pfse146 ; rdf:type up:Disulfide_Bond_Annotation ; rdfs:comment 'Interchain (between HEF1 and HEF2 chains)' . ?pfsb145 faldo:position ?thisPositionOn147 ; rdf:type faldo:ExactPosition . ?pfse146 faldo:position ?thisPositionOn148 ; rdf:type faldo:ExactPosition . ?pfs149 up:annotation ?annotation150 . ?annotation150 faldo:begin ?pfsb151 ; faldo:end ?pfse152 ; rdf:type up:Disulfide_Bond_Annotation . ?pfsb151 faldo:position ?thisPositionOn153 ; rdf:type faldo:ExactPosition . ?pfse152 faldo:position ?thisPositionOn154 ; rdf:type faldo:ExactPosition . ?pfs155 up:annotation ?annotation156 . ?annotation156 faldo:begin ?pfsb157 ; faldo:end ?pfse158 ; rdf:type up:Disulfide_Bond_Annotation . ?pfsb157 faldo:position ?thisPositionOn159 ; rdf:type faldo:ExactPosition . ?pfse158 faldo:position ?thisPositionOn160 ; rdf:type faldo:ExactPosition . ?pfs161 up:annotation ?annotation162 . ?annotation162 faldo:begin ?pfsb163 ; faldo:end ?pfse164 ; rdf:type up:Disulfide_Bond_Annotation . ?pfsb163 faldo:position ?thisPositionOn165 ; rdf:type faldo:ExactPosition . ?pfse164 faldo:position ?thisPositionOn166 ; rdf:type faldo:ExactPosition . ?pfs167 up:annotation ?annotation168 . ?annotation168 faldo:begin ?pfsb169 ; faldo:end ?pfse170 ; rdf:type up:Disulfide_Bond_Annotation . ?pfsb169 faldo:position ?thisPositionOn171 ; rdf:type faldo:ExactPosition . ?pfse170 faldo:position ?thisPositionOn172 ; rdf:type faldo:ExactPosition . ?pfs173 up:annotation ?annotation174 . ?annotation174 faldo:begin ?pfsb175 ; faldo:end ?pfse176 ; rdf:type up:Disulfide_Bond_Annotation . ?pfsb175 faldo:position ?thisPositionOn177 ; rdf:type faldo:ExactPosition . ?pfse176 faldo:position ?thisPositionOn178 ; rdf:type faldo:ExactPosition . ?pfs179 up:annotation ?annotation180 . ?annotation180 faldo:begin ?pfsb181 ; faldo:end ?pfse182 ; rdf:type up:Disulfide_Bond_Annotation . ?pfsb181 faldo:position ?thisPositionOn183 ; rdf:type faldo:ExactPosition . ?pfse182 faldo:position ?thisPositionOn184 ; rdf:type faldo:ExactPosition . ?sam185 up:classifiedWith keyword:1133 , keyword:472 , keyword:812 . ?transmembrane186 faldo:begin ?transmembraneb187 ; faldo:end ?transmembranee188 . ?transmembraneb187 faldo:position ?transmembranebp189 . ?transmembranee188 faldo:position ?transmembraneep190 . ?keyword191 up:range ?transmembrane186 . ?keyword192 up:range ?transmembrane186 . ?keyword193 up:range ?transmembrane186 . ?sam194 up:classifiedWith keyword:732 . ?signal195 faldo:begin ?signalb196 ; faldo:end ?signale197 . ?signalb196 faldo:position ?signalbp198 . ?signale197 faldo:position ?signalep199 . ?keyword200 up:range ?signal195 . _:928078 a rdf:Statement ; up:attribution _:928004 ; rdf:subject ?this ; rdf:predicate up:annotation ; rdf:object ?annotation0 . _:928079 a rdf:Statement ; up:attribution _:928005 ; rdf:subject ?this ; rdf:predicate up:classifiedWith ; rdf:object keyword:1015 . _:928080 a rdf:Statement ; up:attribution _:928006 ; rdf:subject ?this ; rdf:predicate up:classifiedWith ; rdf:object keyword:1170 . _:928081 a rdf:Statement ; up:attribution _:928007 ; rdf:subject ?this ; rdf:predicate up:classifiedWith ; rdf:object keyword:1168 . _:928082 a rdf:Statement ; up:attribution _:928008 ; rdf:subject ?this ; rdf:predicate up:classifiedWith ; rdf:object keyword:325 . _:928083 a rdf:Statement ; up:attribution _:928009 ; rdf:subject ?this ; rdf:predicate up:classifiedWith ; rdf:object keyword:348 . _:928084 a rdf:Statement ; up:attribution _:928010 ; rdf:subject ?this ; rdf:predicate up:classifiedWith ; rdf:object keyword:1032 . _:928085 a rdf:Statement ; up:attribution _:928011 ; rdf:subject ?this ; rdf:predicate up:classifiedWith ; rdf:object keyword:1043 . _:928086 a rdf:Statement ; up:attribution _:928012 ; rdf:subject ?this ; rdf:predicate up:classifiedWith ; rdf:object keyword:945 . _:928087 a rdf:Statement ; up:attribution _:928013 ; rdf:subject ?this ; rdf:predicate up:classifiedWith ; rdf:object keyword:472 . _:928088 a rdf:Statement ; up:attribution _:928014 ; rdf:subject ?this ; rdf:predicate up:classifiedWith ; rdf:object keyword:732 . _:928089 a rdf:Statement ; up:attribution _:928015 ; rdf:subject ?this ; rdf:predicate up:classifiedWith ; rdf:object keyword:812 . _:928090 a rdf:Statement ; up:attribution _:928016 ; rdf:subject ?this ; rdf:predicate up:classifiedWith ; rdf:object keyword:1133 . _:928091 a rdf:Statement ; up:attribution _:928017 ; rdf:subject ?this ; rdf:predicate up:classifiedWith ; rdf:object keyword:1161 . _:928092 a rdf:Statement ; up:attribution _:928018 ; rdf:subject ?this ; rdf:predicate up:classifiedWith ; rdf:object keyword:261 . _:928093 a rdf:Statement ; up:attribution _:928019 ; rdf:subject ?this ; rdf:predicate up:classifiedWith ; rdf:object keyword:1162 . _:928094 a rdf:Statement ; up:attribution _:928020 ; rdf:subject ?this ; rdf:predicate up:classifiedWith ; rdf:object keyword:946 . _:928095 a rdf:Statement ; up:attribution _:928021 ; rdf:subject ?this ; rdf:predicate up:classifiedWith ; rdf:object keyword:1164 . _:928096 a rdf:Statement ; up:attribution _:928022 ; rdf:subject ?this ; rdf:predicate up:classifiedWith ; rdf:object keyword:1160 . _:928097 a rdf:Statement ; up:attribution _:928023 ; rdf:subject ?this ; rdf:predicate up:classifiedWith ; rdf:object GO:0020002 . _:928098 a rdf:Statement ; up:attribution _:928024 ; rdf:subject ?this ; rdf:predicate up:classifiedWith ; rdf:object GO:0016020 . _:928099 a rdf:Statement ; up:attribution _:928025 ; rdf:subject ?this ; rdf:predicate up:classifiedWith ; rdf:object GO:0019031 . _:928100 a rdf:Statement ; up:attribution _:928026 ; rdf:subject ?this ; rdf:predicate up:classifiedWith ; rdf:object GO:0046789 . _:928101 a rdf:Statement ; up:attribution _:928027 ; rdf:subject ?this ; rdf:predicate up:classifiedWith ; rdf:object GO:0039654 . _:928102 a rdf:Statement ; up:attribution _:928028 ; rdf:subject ?this ; rdf:predicate up:classifiedWith ; rdf:object GO:0046761 . _:928103 a rdf:Statement ; up:attribution _:928030 ; rdf:subject ?this ; rdf:predicate up:component ; rdf:object ?namedpart1 . _:928104 a rdf:Statement ; up:attribution _:928032 ; rdf:subject ?this ; rdf:predicate up:component ; rdf:object ?namedpart2 . _:928105 a rdf:Statement ; up:attribution _:928034 ; rdf:subject ?this ; rdf:predicate up:component ; rdf:object ?namedpart3 . _:928106 a rdf:Statement ; up:attribution _:928036 ; rdf:subject ?this ; rdf:predicate up:component ; rdf:object ?namedpart4 . _:928107 a rdf:Statement ; up:attribution _:928037 ; rdf:subject ?case6 ; rdf:predicate up:classifiedWith ; rdf:object keyword:1167 . _:928108 a rdf:Statement ; up:attribution _:928038 ; rdf:subject ?case6 ; rdf:predicate up:classifiedWith ; rdf:object keyword:1165 . _:928109 a rdf:Statement ; up:attribution _:928039 ; rdf:subject ?case6 ; rdf:predicate up:classifiedWith ; rdf:object GO:0075512 . _:928110 a rdf:Statement ; up:attribution _:928040 ; rdf:subject ?case7 ; rdf:predicate up:classifiedWith ; rdf:object keyword:378 . _:928111 a rdf:Statement ; up:attribution _:928041 ; rdf:subject ?case8 ; rdf:predicate up:classifiedWith ; rdf:object keyword:449 . _:928112 a rdf:Statement ; up:attribution _:928042 ; rdf:subject ?case8 ; rdf:predicate up:classifiedWith ; rdf:object keyword:564 . _:928113 a rdf:Statement ; up:attribution _:928043 ; rdf:subject ?case9 ; rdf:predicate up:recommendedName ; rdf:object ?name10 . _:928114 a rdf:Statement ; up:attribution _:928044 ; rdf:subject ?case9 ; rdf:predicate up:precursor ; rdf:object "true"^^xsd:boolean . _:928115 a rdf:Statement ; up:source unirule:MF_04072 ; rdf:subject ?pfs11 ; rdf:predicate up:annotation ; rdf:object ?annotation12 . _:928116 a rdf:Statement ; up:attribution _:928045 ; rdf:subject ?pfs11 ; rdf:predicate up:annotation ; rdf:object ?annotation12 . _:928117 a rdf:Statement ; up:source unirule:MF_04072 ; rdf:subject ?pfs17 ; rdf:predicate up:annotation ; rdf:object ?annotation18 . _:928118 a rdf:Statement ; up:attribution _:928046 ; rdf:subject ?pfs17 ; rdf:predicate up:annotation ; rdf:object ?annotation18 . _:928119 a rdf:Statement ; up:source unirule:MF_04072 ; rdf:subject ?pfs23 ; rdf:predicate up:annotation ; rdf:object ?annotation24 . _:928120 a rdf:Statement ; up:attribution _:928047 ; rdf:subject ?pfs23 ; rdf:predicate up:annotation ; rdf:object ?annotation24 . _:928121 a rdf:Statement ; up:source unirule:MF_04072 ; rdf:subject ?pfs29 ; rdf:predicate up:annotation ; rdf:object ?annotation30 . _:928122 a rdf:Statement ; up:attribution _:928048 ; rdf:subject ?pfs29 ; rdf:predicate up:annotation ; rdf:object ?annotation30 . _:928123 a rdf:Statement ; up:source unirule:MF_04072 ; rdf:subject ?pfs35 ; rdf:predicate up:annotation ; rdf:object ?annotation36 . _:928124 a rdf:Statement ; up:attribution _:928049 ; rdf:subject ?pfs35 ; rdf:predicate up:annotation ; rdf:object ?annotation36 . _:928125 a rdf:Statement ; up:source unirule:MF_04072 ; rdf:subject ?pfs41 ; rdf:predicate up:annotation ; rdf:object ?annotation42 . _:928126 a rdf:Statement ; up:attribution _:928050 ; rdf:subject ?pfs41 ; rdf:predicate up:annotation ; rdf:object ?annotation42 . _:928127 a rdf:Statement ; up:source unirule:MF_04072 ; rdf:subject ?pfs47 ; rdf:predicate up:annotation ; rdf:object ?annotation48 . _:928128 a rdf:Statement ; up:attribution _:928051 ; rdf:subject ?pfs47 ; rdf:predicate up:annotation ; rdf:object ?annotation48 . _:928129 a rdf:Statement ; up:source unirule:MF_04072 ; rdf:subject ?pfs53 ; rdf:predicate up:annotation ; rdf:object ?annotation54 . _:928130 a rdf:Statement ; up:attribution _:928052 ; rdf:subject ?pfs53 ; rdf:predicate up:annotation ; rdf:object ?annotation54 . _:928131 a rdf:Statement ; up:source unirule:MF_04072 ; rdf:subject ?pfs59 ; rdf:predicate up:annotation ; rdf:object ?annotation60 . _:928132 a rdf:Statement ; up:attribution _:928053 ; rdf:subject ?pfs59 ; rdf:predicate up:annotation ; rdf:object ?annotation60 . _:928133 a rdf:Statement ; up:source unirule:MF_04072 ; rdf:subject ?pfs65 ; rdf:predicate up:annotation ; rdf:object ?annotation66 . _:928134 a rdf:Statement ; up:attribution _:928054 ; rdf:subject ?pfs65 ; rdf:predicate up:annotation ; rdf:object ?annotation66 . _:928135 a rdf:Statement ; up:source unirule:MF_04072 ; rdf:subject ?pfs71 ; rdf:predicate up:annotation ; rdf:object ?annotation72 . _:928136 a rdf:Statement ; up:attribution _:928055 ; rdf:subject ?pfs71 ; rdf:predicate up:annotation ; rdf:object ?annotation72 . _:928137 a rdf:Statement ; up:source unirule:MF_04072 ; rdf:subject ?pfs77 ; rdf:predicate up:annotation ; rdf:object ?annotation78 . _:928138 a rdf:Statement ; up:attribution _:928056 ; rdf:subject ?pfs77 ; rdf:predicate up:annotation ; rdf:object ?annotation78 . _:928139 a rdf:Statement ; up:source unirule:MF_04072 ; rdf:subject ?pfs83 ; rdf:predicate up:annotation ; rdf:object ?annotation84 . _:928140 a rdf:Statement ; up:attribution _:928057 ; rdf:subject ?pfs83 ; rdf:predicate up:annotation ; rdf:object ?annotation84 . _:928141 a rdf:Statement ; up:source unirule:MF_04072 ; rdf:subject ?pfs89 ; rdf:predicate up:annotation ; rdf:object ?annotation90 . _:928142 a rdf:Statement ; up:attribution _:928058 ; rdf:subject ?pfs89 ; rdf:predicate up:annotation ; rdf:object ?annotation90 . _:928143 a rdf:Statement ; up:source unirule:MF_04072 ; rdf:subject ?pfs95 ; rdf:predicate up:annotation ; rdf:object ?annotation96 . _:928144 a rdf:Statement ; up:attribution _:928059 ; rdf:subject ?pfs95 ; rdf:predicate up:annotation ; rdf:object ?annotation96 . _:928145 a rdf:Statement ; up:source unirule:MF_04072 ; rdf:subject ?pfs101 ; rdf:predicate up:annotation ; rdf:object ?annotation102 . _:928146 a rdf:Statement ; up:attribution _:928060 ; rdf:subject ?pfs101 ; rdf:predicate up:annotation ; rdf:object ?annotation102 . _:928147 a rdf:Statement ; up:source unirule:MF_04072 ; rdf:subject ?pfs107 ; rdf:predicate up:annotation ; rdf:object ?annotation108 . _:928148 a rdf:Statement ; up:attribution _:928061 ; rdf:subject ?pfs107 ; rdf:predicate up:annotation ; rdf:object ?annotation108 . _:928149 a rdf:Statement ; up:source unirule:MF_04072 ; rdf:subject ?pfs113 ; rdf:predicate up:annotation ; rdf:object ?annotation114 . _:928150 a rdf:Statement ; up:attribution _:928062 ; rdf:subject ?pfs113 ; rdf:predicate up:annotation ; rdf:object ?annotation114 . _:928151 a rdf:Statement ; up:source unirule:MF_04072 ; rdf:subject ?pfs119 ; rdf:predicate up:annotation ; rdf:object ?annotation120 . _:928152 a rdf:Statement ; up:attribution _:928063 ; rdf:subject ?pfs119 ; rdf:predicate up:annotation ; rdf:object ?annotation120 . _:928153 a rdf:Statement ; up:source unirule:MF_04072 ; rdf:subject ?pfs125 ; rdf:predicate up:annotation ; rdf:object ?annotation126 . _:928154 a rdf:Statement ; up:attribution _:928064 ; rdf:subject ?pfs125 ; rdf:predicate up:annotation ; rdf:object ?annotation126 . _:928155 a rdf:Statement ; up:source unirule:MF_04072 ; rdf:subject ?pfs131 ; rdf:predicate up:annotation ; rdf:object ?annotation132 . _:928156 a rdf:Statement ; up:attribution _:928065 ; rdf:subject ?pfs131 ; rdf:predicate up:annotation ; rdf:object ?annotation132 . _:928157 a rdf:Statement ; up:source unirule:MF_04072 ; rdf:subject ?pfs137 ; rdf:predicate up:annotation ; rdf:object ?annotation138 . _:928158 a rdf:Statement ; up:attribution _:928066 ; rdf:subject ?pfs137 ; rdf:predicate up:annotation ; rdf:object ?annotation138 . _:928159 a rdf:Statement ; up:source unirule:MF_04072 ; rdf:subject ?pfs143 ; rdf:predicate up:annotation ; rdf:object ?annotation144 . _:928160 a rdf:Statement ; up:attribution _:928067 ; rdf:subject ?pfs143 ; rdf:predicate up:annotation ; rdf:object ?annotation144 . _:928161 a rdf:Statement ; up:source unirule:MF_04072 ; rdf:subject ?pfs149 ; rdf:predicate up:annotation ; rdf:object ?annotation150 . _:928162 a rdf:Statement ; up:attribution _:928068 ; rdf:subject ?pfs149 ; rdf:predicate up:annotation ; rdf:object ?annotation150 . _:928163 a rdf:Statement ; up:source unirule:MF_04072 ; rdf:subject ?pfs155 ; rdf:predicate up:annotation ; rdf:object ?annotation156 . _:928164 a rdf:Statement ; up:attribution _:928069 ; rdf:subject ?pfs155 ; rdf:predicate up:annotation ; rdf:object ?annotation156 . _:928165 a rdf:Statement ; up:source unirule:MF_04072 ; rdf:subject ?pfs161 ; rdf:predicate up:annotation ; rdf:object ?annotation162 . _:928166 a rdf:Statement ; up:attribution _:928070 ; rdf:subject ?pfs161 ; rdf:predicate up:annotation ; rdf:object ?annotation162 . _:928167 a rdf:Statement ; up:source unirule:MF_04072 ; rdf:subject ?pfs167 ; rdf:predicate up:annotation ; rdf:object ?annotation168 . _:928168 a rdf:Statement ; up:attribution _:928071 ; rdf:subject ?pfs167 ; rdf:predicate up:annotation ; rdf:object ?annotation168 . _:928169 a rdf:Statement ; up:source unirule:MF_04072 ; rdf:subject ?pfs173 ; rdf:predicate up:annotation ; rdf:object ?annotation174 . _:928170 a rdf:Statement ; up:attribution _:928072 ; rdf:subject ?pfs173 ; rdf:predicate up:annotation ; rdf:object ?annotation174 . _:928171 a rdf:Statement ; up:source unirule:MF_04072 ; rdf:subject ?pfs179 ; rdf:predicate up:annotation ; rdf:object ?annotation180 . _:928172 a rdf:Statement ; up:attribution _:928073 ; rdf:subject ?pfs179 ; rdf:predicate up:annotation ; rdf:object ?annotation180 . _:928173 a rdf:Statement ; up:attribution _:928074 ; rdf:subject ?sam185 ; rdf:predicate up:classifiedWith ; rdf:object keyword:472 . _:928174 a rdf:Statement ; up:attribution _:928075 ; rdf:subject ?sam185 ; rdf:predicate up:classifiedWith ; rdf:object keyword:812 . _:928175 a rdf:Statement ; up:attribution _:928076 ; rdf:subject ?sam185 ; rdf:predicate up:classifiedWith ; rdf:object keyword:1133 . _:928176 a rdf:Statement ; up:attribution _:928077 ; rdf:subject ?sam194 ; rdf:predicate up:classifiedWith ; rdf:object keyword:732 . } WHERE { #baseURI: http://purl.uniprot.org/unirule/MF_04072 #Rule MF_04072 Created by:? on:2017-04-20 Modified by:Edouard de Castro on:2024-09-02 ?this up:organism ?thisOrganism ; rdfs:seeAlso signature:MF_04072 . ?thisOrganism rdfs:subClassOf+ taxon:11308 . BIND(URI(CONCAT(STR(?this), '#MF_04072a0')) AS ?annotation0) . BIND(URI(CONCAT(STR(?this), '#MF_04072a1')) AS ?namedpart1) . BIND(URI(CONCAT(STR(?this), '#MF_04072a2')) AS ?namedpart2) . BIND(URI(CONCAT(STR(?this), '#MF_04072a3')) AS ?namedpart3) . BIND(URI(CONCAT(STR(?this), '#MF_04072a4')) AS ?namedpart4) . OPTIONAL { ?this up:sequence ?thisSequence . ?thisSequence rdf:value ?thisSequenceValue . ?templateMotifMatch206 faldo:location ?templateMotifSequenceMatchRegionP03452207 ; edam:is_output_of ?templateMotifSequenceProfileAlignmentOperationP03452209 ; rdf:type edam:data_0869 ; rdf:value ?templateMotifCigarP03452MF_04072202 . ?templateMotifSequenceMatchRegionP03452207 faldo:begin ?templateMotifSequenceMatchBeginP03452208 . ?templateMotifSequenceMatchBeginP03452208 faldo:position ?templateMotifSequenceMatchBeginPositionP03452203 ; faldo:reference isoform:P03452-1 . ?templateMotifSequenceProfileAlignmentOperationP03452209 edam:has_input signature:MF_04072 ; rdf:type edam:operation_0300 . ?targetMotifMatch210 faldo:location ?targetMotifMatchRegionMatch211 ; edam:is_output_of ?targetMotifSequenceAlignmentOperationMF_04072213 ; rdf:type edam:data_0869 ; rdf:value ?targetMotifMatchCigarP03452MF_04072204 . ?targetMotifMatchRegionMatch211 faldo:begin ?targetMotifMatchRegionMatchBeginMF_04072212 . ?targetMotifMatchRegionMatchBeginMF_04072212 faldo:position ?targetMotifMatchRegionMatchBeginPositionMF_04072205 ; faldo:reference ?thisSequence . ?targetMotifSequenceAlignmentOperationMF_04072213 edam:has_input signature:MF_04072 ; rdf:type edam:operation_0300 . VALUES ?supertaxon201 {taxon:197912 taxon:197911} ?this up:organism ?thisOrganism . ?thisOrganism rdfs:subClassOf+ ?supertaxon201 . BIND(STRLEN(REPLACE(SUBSTR(?templateMotifCigarP03452MF_04072202, 1, (STRLEN(?templateMotifCigarP03452MF_04072202) - STRLEN(REPLACE(?templateMotifCigarP03452MF_04072202, CONCAT('^(?:-*[^-]){', STR(((18 - ?templateMotifSequenceMatchBeginPositionP03452203) + 1)), '}'), '')))), '[a-z]', '')) AS ?step1214) . BIND((STRLEN(SUBSTR(?targetMotifMatchCigarP03452MF_04072204, 1, (STRLEN(?targetMotifMatchCigarP03452MF_04072204) - STRLEN(REPLACE(?targetMotifMatchCigarP03452MF_04072204, CONCAT('^(?:[a-z]*(?:[A-Z]|-)){', STR(?step1214), '}'), ''))))) - STRLEN(REPLACE(SUBSTR(?targetMotifMatchCigarP03452MF_04072204, 1, (STRLEN(?targetMotifMatchCigarP03452MF_04072204) - STRLEN(REPLACE(?targetMotifMatchCigarP03452MF_04072204, CONCAT('^(?:[a-z]*(?:[A-Z]|-)){', STR(?step1214), '}'), '')))), '[^-]', ''))) AS ?step2215) . BIND(((?step2215 + ?targetMotifMatchRegionMatchBeginPositionMF_04072205) - 1) AS ?thisPositionOn15) . BIND(STRLEN(REPLACE(SUBSTR(?templateMotifCigarP03452MF_04072202, 1, (STRLEN(?templateMotifCigarP03452MF_04072202) - STRLEN(REPLACE(?templateMotifCigarP03452MF_04072202, CONCAT('^(?:-*[^-]){', STR(((343 - ?templateMotifSequenceMatchBeginPositionP03452203) + 1)), '}'), '')))), '[a-z]', '')) AS ?step1216) . BIND((STRLEN(SUBSTR(?targetMotifMatchCigarP03452MF_04072204, 1, (STRLEN(?targetMotifMatchCigarP03452MF_04072204) - STRLEN(REPLACE(?targetMotifMatchCigarP03452MF_04072204, CONCAT('^(?:[a-z]*(?:[A-Z]|-)){', STR(?step1216), '}'), ''))))) - STRLEN(REPLACE(SUBSTR(?targetMotifMatchCigarP03452MF_04072204, 1, (STRLEN(?targetMotifMatchCigarP03452MF_04072204) - STRLEN(REPLACE(?targetMotifMatchCigarP03452MF_04072204, CONCAT('^(?:[a-z]*(?:[A-Z]|-)){', STR(?step1216), '}'), '')))), '[^-]', ''))) AS ?step2217) . BIND(((?step2217 + ?targetMotifMatchRegionMatchBeginPositionMF_04072205) - 1) AS ?thisPositionOn16) . BIND(?this AS ?pfs1t218) . BIND(URI(CONCAT(STR(?thisSequence), '#position', STR(?thisPositionOn15))) AS ?pfsb13) . BIND(URI(CONCAT(STR(?thisSequence), '#position', STR(?thisPositionOn16))) AS ?pfse14) . FILTER ((BOUND(?thisPositionOn15) && BOUND(?thisPositionOn16))) . BIND(URI(CONCAT(STR(?this), '#MF_04072a12')) AS ?annotation12) . BIND(?this AS ?pfs11) . } OPTIONAL { ?this up:sequence ?thisSequence . ?thisSequence rdf:value ?thisSequenceValue . ?templateMotifMatch224 faldo:location ?templateMotifSequenceMatchRegionP03452225 ; edam:is_output_of ?templateMotifSequenceProfileAlignmentOperationP03452227 ; rdf:type edam:data_0869 ; rdf:value ?templateMotifCigarP03452MF_04072220 . ?templateMotifSequenceMatchRegionP03452225 faldo:begin ?templateMotifSequenceMatchBeginP03452226 . ?templateMotifSequenceMatchBeginP03452226 faldo:position ?templateMotifSequenceMatchBeginPositionP03452221 ; faldo:reference isoform:P03452-1 . ?templateMotifSequenceProfileAlignmentOperationP03452227 edam:has_input signature:MF_04072 ; rdf:type edam:operation_0300 . ?targetMotifMatch228 faldo:location ?targetMotifMatchRegionMatch229 ; edam:is_output_of ?targetMotifSequenceAlignmentOperationMF_04072231 ; rdf:type edam:data_0869 ; rdf:value ?targetMotifMatchCigarP03452MF_04072222 . ?targetMotifMatchRegionMatch229 faldo:begin ?targetMotifMatchRegionMatchBeginMF_04072230 . ?targetMotifMatchRegionMatchBeginMF_04072230 faldo:position ?targetMotifMatchRegionMatchBeginPositionMF_04072223 ; faldo:reference ?thisSequence . ?targetMotifSequenceAlignmentOperationMF_04072231 edam:has_input signature:MF_04072 ; rdf:type edam:operation_0300 . VALUES ?supertaxon219 {taxon:197912 taxon:197911} ?this up:organism ?thisOrganism . ?thisOrganism rdfs:subClassOf+ ?supertaxon219 . BIND(STRLEN(REPLACE(SUBSTR(?templateMotifCigarP03452MF_04072220, 1, (STRLEN(?templateMotifCigarP03452MF_04072220) - STRLEN(REPLACE(?templateMotifCigarP03452MF_04072220, CONCAT('^(?:-*[^-]){', STR(((344 - ?templateMotifSequenceMatchBeginPositionP03452221) + 1)), '}'), '')))), '[a-z]', '')) AS ?step1232) . BIND((STRLEN(SUBSTR(?targetMotifMatchCigarP03452MF_04072222, 1, (STRLEN(?targetMotifMatchCigarP03452MF_04072222) - STRLEN(REPLACE(?targetMotifMatchCigarP03452MF_04072222, CONCAT('^(?:[a-z]*(?:[A-Z]|-)){', STR(?step1232), '}'), ''))))) - STRLEN(REPLACE(SUBSTR(?targetMotifMatchCigarP03452MF_04072222, 1, (STRLEN(?targetMotifMatchCigarP03452MF_04072222) - STRLEN(REPLACE(?targetMotifMatchCigarP03452MF_04072222, CONCAT('^(?:[a-z]*(?:[A-Z]|-)){', STR(?step1232), '}'), '')))), '[^-]', ''))) AS ?step2233) . BIND(((?step2233 + ?targetMotifMatchRegionMatchBeginPositionMF_04072223) - 1) AS ?thisPositionOn21) . BIND(STRLEN(REPLACE(SUBSTR(?templateMotifCigarP03452MF_04072220, 1, (STRLEN(?templateMotifCigarP03452MF_04072220) - STRLEN(REPLACE(?templateMotifCigarP03452MF_04072220, CONCAT('^(?:-*[^-]){', STR(((565 - ?templateMotifSequenceMatchBeginPositionP03452221) + 1)), '}'), '')))), '[a-z]', '')) AS ?step1234) . BIND((STRLEN(SUBSTR(?targetMotifMatchCigarP03452MF_04072222, 1, (STRLEN(?targetMotifMatchCigarP03452MF_04072222) - STRLEN(REPLACE(?targetMotifMatchCigarP03452MF_04072222, CONCAT('^(?:[a-z]*(?:[A-Z]|-)){', STR(?step1234), '}'), ''))))) - STRLEN(REPLACE(SUBSTR(?targetMotifMatchCigarP03452MF_04072222, 1, (STRLEN(?targetMotifMatchCigarP03452MF_04072222) - STRLEN(REPLACE(?targetMotifMatchCigarP03452MF_04072222, CONCAT('^(?:[a-z]*(?:[A-Z]|-)){', STR(?step1234), '}'), '')))), '[^-]', ''))) AS ?step2235) . BIND(((?step2235 + ?targetMotifMatchRegionMatchBeginPositionMF_04072223) - 1) AS ?thisPositionOn22) . BIND(?this AS ?pfs1t236) . BIND(URI(CONCAT(STR(?thisSequence), '#position', STR(?thisPositionOn21))) AS ?pfsb19) . BIND(URI(CONCAT(STR(?thisSequence), '#position', STR(?thisPositionOn22))) AS ?pfse20) . FILTER ((BOUND(?thisPositionOn21) && BOUND(?thisPositionOn22))) . BIND(URI(CONCAT(STR(?this), '#MF_04072a18')) AS ?annotation18) . BIND(?this AS ?pfs17) . } OPTIONAL { ?this up:sequence ?thisSequence . ?thisSequence rdf:value ?thisSequenceValue . ?templateMotifMatch242 faldo:location ?templateMotifSequenceMatchRegionP03452243 ; edam:is_output_of ?templateMotifSequenceProfileAlignmentOperationP03452245 ; rdf:type edam:data_0869 ; rdf:value ?templateMotifCigarP03452MF_04072238 . ?templateMotifSequenceMatchRegionP03452243 faldo:begin ?templateMotifSequenceMatchBeginP03452244 . ?templateMotifSequenceMatchBeginP03452244 faldo:position ?templateMotifSequenceMatchBeginPositionP03452239 ; faldo:reference isoform:P03452-1 . ?templateMotifSequenceProfileAlignmentOperationP03452245 edam:has_input signature:MF_04072 ; rdf:type edam:operation_0300 . ?targetMotifMatch246 faldo:location ?targetMotifMatchRegionMatch247 ; edam:is_output_of ?targetMotifSequenceAlignmentOperationMF_04072249 ; rdf:type edam:data_0869 ; rdf:value ?targetMotifMatchCigarP03452MF_04072240 . ?targetMotifMatchRegionMatch247 faldo:begin ?targetMotifMatchRegionMatchBeginMF_04072248 . ?targetMotifMatchRegionMatchBeginMF_04072248 faldo:position ?targetMotifMatchRegionMatchBeginPositionMF_04072241 ; faldo:reference ?thisSequence . ?targetMotifSequenceAlignmentOperationMF_04072249 edam:has_input signature:MF_04072 ; rdf:type edam:operation_0300 . VALUES ?supertaxon237 {taxon:197912 taxon:197911} ?this up:organism ?thisOrganism . ?thisOrganism rdfs:subClassOf+ ?supertaxon237 . BIND(STRLEN(REPLACE(SUBSTR(?templateMotifCigarP03452MF_04072238, 1, (STRLEN(?templateMotifCigarP03452MF_04072238) - STRLEN(REPLACE(?templateMotifCigarP03452MF_04072238, CONCAT('^(?:-*[^-]){', STR(((343 - ?templateMotifSequenceMatchBeginPositionP03452239) + 1)), '}'), '')))), '[a-z]', '')) AS ?step1250) . BIND((STRLEN(SUBSTR(?targetMotifMatchCigarP03452MF_04072240, 1, (STRLEN(?targetMotifMatchCigarP03452MF_04072240) - STRLEN(REPLACE(?targetMotifMatchCigarP03452MF_04072240, CONCAT('^(?:[a-z]*(?:[A-Z]|-)){', STR(?step1250), '}'), ''))))) - STRLEN(REPLACE(SUBSTR(?targetMotifMatchCigarP03452MF_04072240, 1, (STRLEN(?targetMotifMatchCigarP03452MF_04072240) - STRLEN(REPLACE(?targetMotifMatchCigarP03452MF_04072240, CONCAT('^(?:[a-z]*(?:[A-Z]|-)){', STR(?step1250), '}'), '')))), '[^-]', ''))) AS ?step2251) . BIND(((?step2251 + ?targetMotifMatchRegionMatchBeginPositionMF_04072241) - 1) AS ?thisPositionOn27) . BIND(STRLEN(REPLACE(SUBSTR(?templateMotifCigarP03452MF_04072238, 1, (STRLEN(?templateMotifCigarP03452MF_04072238) - STRLEN(REPLACE(?templateMotifCigarP03452MF_04072238, CONCAT('^(?:-*[^-]){', STR(((344 - ?templateMotifSequenceMatchBeginPositionP03452239) + 1)), '}'), '')))), '[a-z]', '')) AS ?step1252) . BIND((STRLEN(SUBSTR(?targetMotifMatchCigarP03452MF_04072240, 1, (STRLEN(?targetMotifMatchCigarP03452MF_04072240) - STRLEN(REPLACE(?targetMotifMatchCigarP03452MF_04072240, CONCAT('^(?:[a-z]*(?:[A-Z]|-)){', STR(?step1252), '}'), ''))))) - STRLEN(REPLACE(SUBSTR(?targetMotifMatchCigarP03452MF_04072240, 1, (STRLEN(?targetMotifMatchCigarP03452MF_04072240) - STRLEN(REPLACE(?targetMotifMatchCigarP03452MF_04072240, CONCAT('^(?:[a-z]*(?:[A-Z]|-)){', STR(?step1252), '}'), '')))), '[^-]', ''))) AS ?step2253) . BIND(((?step2253 + ?targetMotifMatchRegionMatchBeginPositionMF_04072241) - 1) AS ?thisPositionOn28) . BIND(?this AS ?pfs1t254) . BIND(URI(CONCAT(STR(?thisSequence), '#position', STR(?thisPositionOn27))) AS ?pfsb25) . BIND(URI(CONCAT(STR(?thisSequence), '#position', STR(?thisPositionOn28))) AS ?pfse26) . FILTER ((SUBSTR(?thisSequenceValue, ?thisPositionOn27, (?thisPositionOn28 - ?thisPositionOn27)) = 'RG')) . BIND(URI(CONCAT(STR(?this), '#MF_04072a24')) AS ?annotation24) . BIND(?this AS ?pfs23) . } OPTIONAL { ?this up:sequence ?thisSequence . ?thisSequence rdf:value ?thisSequenceValue . ?templateMotifMatch260 faldo:location ?templateMotifSequenceMatchRegionP03452261 ; edam:is_output_of ?templateMotifSequenceProfileAlignmentOperationP03452263 ; rdf:type edam:data_0869 ; rdf:value ?templateMotifCigarP03452MF_04072256 . ?templateMotifSequenceMatchRegionP03452261 faldo:begin ?templateMotifSequenceMatchBeginP03452262 . ?templateMotifSequenceMatchBeginP03452262 faldo:position ?templateMotifSequenceMatchBeginPositionP03452257 ; faldo:reference isoform:P03452-1 . ?templateMotifSequenceProfileAlignmentOperationP03452263 edam:has_input signature:MF_04072 ; rdf:type edam:operation_0300 . ?targetMotifMatch264 faldo:location ?targetMotifMatchRegionMatch265 ; edam:is_output_of ?targetMotifSequenceAlignmentOperationMF_04072267 ; rdf:type edam:data_0869 ; rdf:value ?targetMotifMatchCigarP03452MF_04072258 . ?targetMotifMatchRegionMatch265 faldo:begin ?targetMotifMatchRegionMatchBeginMF_04072266 . ?targetMotifMatchRegionMatchBeginMF_04072266 faldo:position ?targetMotifMatchRegionMatchBeginPositionMF_04072259 ; faldo:reference ?thisSequence . ?targetMotifSequenceAlignmentOperationMF_04072267 edam:has_input signature:MF_04072 ; rdf:type edam:operation_0300 . VALUES ?supertaxon255 {taxon:197912 taxon:197911} ?this up:organism ?thisOrganism . ?thisOrganism rdfs:subClassOf+ ?supertaxon255 . BIND(STRLEN(REPLACE(SUBSTR(?templateMotifCigarP03452MF_04072256, 1, (STRLEN(?templateMotifCigarP03452MF_04072256) - STRLEN(REPLACE(?templateMotifCigarP03452MF_04072256, CONCAT('^(?:-*[^-]){', STR(((554 - ?templateMotifSequenceMatchBeginPositionP03452257) + 1)), '}'), '')))), '[a-z]', '')) AS ?step1268) . BIND((STRLEN(SUBSTR(?targetMotifMatchCigarP03452MF_04072258, 1, (STRLEN(?targetMotifMatchCigarP03452MF_04072258) - STRLEN(REPLACE(?targetMotifMatchCigarP03452MF_04072258, CONCAT('^(?:[a-z]*(?:[A-Z]|-)){', STR(?step1268), '}'), ''))))) - STRLEN(REPLACE(SUBSTR(?targetMotifMatchCigarP03452MF_04072258, 1, (STRLEN(?targetMotifMatchCigarP03452MF_04072258) - STRLEN(REPLACE(?targetMotifMatchCigarP03452MF_04072258, CONCAT('^(?:[a-z]*(?:[A-Z]|-)){', STR(?step1268), '}'), '')))), '[^-]', ''))) AS ?step2269) . BIND(((?step2269 + ?targetMotifMatchRegionMatchBeginPositionMF_04072259) - 1) AS ?thisPositionOn33) . BIND(?thisPositionOn33 AS ?thisPositionOn34) . BIND(?this AS ?pfs1t270) . BIND(URI(CONCAT(STR(?thisSequence), '#position', STR(?thisPositionOn33))) AS ?pfsb31) . BIND(URI(CONCAT(STR(?thisSequence), '#position', STR(?thisPositionOn34))) AS ?pfse32) . FILTER ((SUBSTR(?thisSequenceValue, ?thisPositionOn33, 1) = 'C')) . BIND(URI(CONCAT(STR(?this), '#MF_04072a30')) AS ?annotation30) . BIND(?this AS ?pfs29) . } OPTIONAL { ?this up:sequence ?thisSequence . ?thisSequence rdf:value ?thisSequenceValue . ?templateMotifMatch276 faldo:location ?templateMotifSequenceMatchRegionP03452277 ; edam:is_output_of ?templateMotifSequenceProfileAlignmentOperationP03452279 ; rdf:type edam:data_0869 ; rdf:value ?templateMotifCigarP03452MF_04072272 . ?templateMotifSequenceMatchRegionP03452277 faldo:begin ?templateMotifSequenceMatchBeginP03452278 . ?templateMotifSequenceMatchBeginP03452278 faldo:position ?templateMotifSequenceMatchBeginPositionP03452273 ; faldo:reference isoform:P03452-1 . ?templateMotifSequenceProfileAlignmentOperationP03452279 edam:has_input signature:MF_04072 ; rdf:type edam:operation_0300 . ?targetMotifMatch280 faldo:location ?targetMotifMatchRegionMatch281 ; edam:is_output_of ?targetMotifSequenceAlignmentOperationMF_04072283 ; rdf:type edam:data_0869 ; rdf:value ?targetMotifMatchCigarP03452MF_04072274 . ?targetMotifMatchRegionMatch281 faldo:begin ?targetMotifMatchRegionMatchBeginMF_04072282 . ?targetMotifMatchRegionMatchBeginMF_04072282 faldo:position ?targetMotifMatchRegionMatchBeginPositionMF_04072275 ; faldo:reference ?thisSequence . ?targetMotifSequenceAlignmentOperationMF_04072283 edam:has_input signature:MF_04072 ; rdf:type edam:operation_0300 . VALUES ?supertaxon271 {taxon:197912 taxon:197911} ?this up:organism ?thisOrganism . ?thisOrganism rdfs:subClassOf+ ?supertaxon271 . BIND(STRLEN(REPLACE(SUBSTR(?templateMotifCigarP03452MF_04072272, 1, (STRLEN(?templateMotifCigarP03452MF_04072272) - STRLEN(REPLACE(?templateMotifCigarP03452MF_04072272, CONCAT('^(?:-*[^-]){', STR(((561 - ?templateMotifSequenceMatchBeginPositionP03452273) + 1)), '}'), '')))), '[a-z]', '')) AS ?step1284) . BIND((STRLEN(SUBSTR(?targetMotifMatchCigarP03452MF_04072274, 1, (STRLEN(?targetMotifMatchCigarP03452MF_04072274) - STRLEN(REPLACE(?targetMotifMatchCigarP03452MF_04072274, CONCAT('^(?:[a-z]*(?:[A-Z]|-)){', STR(?step1284), '}'), ''))))) - STRLEN(REPLACE(SUBSTR(?targetMotifMatchCigarP03452MF_04072274, 1, (STRLEN(?targetMotifMatchCigarP03452MF_04072274) - STRLEN(REPLACE(?targetMotifMatchCigarP03452MF_04072274, CONCAT('^(?:[a-z]*(?:[A-Z]|-)){', STR(?step1284), '}'), '')))), '[^-]', ''))) AS ?step2285) . BIND(((?step2285 + ?targetMotifMatchRegionMatchBeginPositionMF_04072275) - 1) AS ?thisPositionOn39) . BIND(?thisPositionOn39 AS ?thisPositionOn40) . BIND(?this AS ?pfs1t286) . BIND(URI(CONCAT(STR(?thisSequence), '#position', STR(?thisPositionOn39))) AS ?pfsb37) . BIND(URI(CONCAT(STR(?thisSequence), '#position', STR(?thisPositionOn40))) AS ?pfse38) . FILTER ((SUBSTR(?thisSequenceValue, ?thisPositionOn39, 1) = 'C')) . BIND(URI(CONCAT(STR(?this), '#MF_04072a36')) AS ?annotation36) . BIND(?this AS ?pfs35) . } OPTIONAL { ?this up:sequence ?thisSequence . ?thisSequence rdf:value ?thisSequenceValue . ?templateMotifMatch292 faldo:location ?templateMotifSequenceMatchRegionP03452293 ; edam:is_output_of ?templateMotifSequenceProfileAlignmentOperationP03452295 ; rdf:type edam:data_0869 ; rdf:value ?templateMotifCigarP03452MF_04072288 . ?templateMotifSequenceMatchRegionP03452293 faldo:begin ?templateMotifSequenceMatchBeginP03452294 . ?templateMotifSequenceMatchBeginP03452294 faldo:position ?templateMotifSequenceMatchBeginPositionP03452289 ; faldo:reference isoform:P03452-1 . ?templateMotifSequenceProfileAlignmentOperationP03452295 edam:has_input signature:MF_04072 ; rdf:type edam:operation_0300 . ?targetMotifMatch296 faldo:location ?targetMotifMatchRegionMatch297 ; edam:is_output_of ?targetMotifSequenceAlignmentOperationMF_04072299 ; rdf:type edam:data_0869 ; rdf:value ?targetMotifMatchCigarP03452MF_04072290 . ?targetMotifMatchRegionMatch297 faldo:begin ?targetMotifMatchRegionMatchBeginMF_04072298 . ?targetMotifMatchRegionMatchBeginMF_04072298 faldo:position ?targetMotifMatchRegionMatchBeginPositionMF_04072291 ; faldo:reference ?thisSequence . ?targetMotifSequenceAlignmentOperationMF_04072299 edam:has_input signature:MF_04072 ; rdf:type edam:operation_0300 . VALUES ?supertaxon287 {taxon:197912 taxon:197911} ?this up:organism ?thisOrganism . ?thisOrganism rdfs:subClassOf+ ?supertaxon287 . BIND(STRLEN(REPLACE(SUBSTR(?templateMotifCigarP03452MF_04072288, 1, (STRLEN(?templateMotifCigarP03452MF_04072288) - STRLEN(REPLACE(?templateMotifCigarP03452MF_04072288, CONCAT('^(?:-*[^-]){', STR(((564 - ?templateMotifSequenceMatchBeginPositionP03452289) + 1)), '}'), '')))), '[a-z]', '')) AS ?step1300) . BIND((STRLEN(SUBSTR(?targetMotifMatchCigarP03452MF_04072290, 1, (STRLEN(?targetMotifMatchCigarP03452MF_04072290) - STRLEN(REPLACE(?targetMotifMatchCigarP03452MF_04072290, CONCAT('^(?:[a-z]*(?:[A-Z]|-)){', STR(?step1300), '}'), ''))))) - STRLEN(REPLACE(SUBSTR(?targetMotifMatchCigarP03452MF_04072290, 1, (STRLEN(?targetMotifMatchCigarP03452MF_04072290) - STRLEN(REPLACE(?targetMotifMatchCigarP03452MF_04072290, CONCAT('^(?:[a-z]*(?:[A-Z]|-)){', STR(?step1300), '}'), '')))), '[^-]', ''))) AS ?step2301) . BIND(((?step2301 + ?targetMotifMatchRegionMatchBeginPositionMF_04072291) - 1) AS ?thisPositionOn45) . BIND(?thisPositionOn45 AS ?thisPositionOn46) . BIND(?this AS ?pfs1t302) . BIND(URI(CONCAT(STR(?thisSequence), '#position', STR(?thisPositionOn45))) AS ?pfsb43) . BIND(URI(CONCAT(STR(?thisSequence), '#position', STR(?thisPositionOn46))) AS ?pfse44) . FILTER ((SUBSTR(?thisSequenceValue, ?thisPositionOn45, 1) = 'C')) . BIND(URI(CONCAT(STR(?this), '#MF_04072a42')) AS ?annotation42) . BIND(?this AS ?pfs41) . } OPTIONAL { ?this up:sequence ?thisSequence . ?thisSequence rdf:value ?thisSequenceValue . ?templateMotifMatch308 faldo:location ?templateMotifSequenceMatchRegionP03452309 ; edam:is_output_of ?templateMotifSequenceProfileAlignmentOperationP03452311 ; rdf:type edam:data_0869 ; rdf:value ?templateMotifCigarP03452MF_04072304 . ?templateMotifSequenceMatchRegionP03452309 faldo:begin ?templateMotifSequenceMatchBeginP03452310 . ?templateMotifSequenceMatchBeginP03452310 faldo:position ?templateMotifSequenceMatchBeginPositionP03452305 ; faldo:reference isoform:P03452-1 . ?templateMotifSequenceProfileAlignmentOperationP03452311 edam:has_input signature:MF_04072 ; rdf:type edam:operation_0300 . ?targetMotifMatch312 faldo:location ?targetMotifMatchRegionMatch313 ; edam:is_output_of ?targetMotifSequenceAlignmentOperationMF_04072315 ; rdf:type edam:data_0869 ; rdf:value ?targetMotifMatchCigarP03452MF_04072306 . ?targetMotifMatchRegionMatch313 faldo:begin ?targetMotifMatchRegionMatchBeginMF_04072314 . ?targetMotifMatchRegionMatchBeginMF_04072314 faldo:position ?targetMotifMatchRegionMatchBeginPositionMF_04072307 ; faldo:reference ?thisSequence . ?targetMotifSequenceAlignmentOperationMF_04072315 edam:has_input signature:MF_04072 ; rdf:type edam:operation_0300 . VALUES ?supertaxon303 {taxon:197912 taxon:197911} ?this up:organism ?thisOrganism . ?thisOrganism rdfs:subClassOf+ ?supertaxon303 . BIND(STRLEN(REPLACE(SUBSTR(?templateMotifCigarP03452MF_04072304, 1, (STRLEN(?templateMotifCigarP03452MF_04072304) - STRLEN(REPLACE(?templateMotifCigarP03452MF_04072304, CONCAT('^(?:-*[^-]){', STR(((21 - ?templateMotifSequenceMatchBeginPositionP03452305) + 1)), '}'), '')))), '[a-z]', '')) AS ?step1316) . BIND((STRLEN(SUBSTR(?targetMotifMatchCigarP03452MF_04072306, 1, (STRLEN(?targetMotifMatchCigarP03452MF_04072306) - STRLEN(REPLACE(?targetMotifMatchCigarP03452MF_04072306, CONCAT('^(?:[a-z]*(?:[A-Z]|-)){', STR(?step1316), '}'), ''))))) - STRLEN(REPLACE(SUBSTR(?targetMotifMatchCigarP03452MF_04072306, 1, (STRLEN(?targetMotifMatchCigarP03452MF_04072306) - STRLEN(REPLACE(?targetMotifMatchCigarP03452MF_04072306, CONCAT('^(?:[a-z]*(?:[A-Z]|-)){', STR(?step1316), '}'), '')))), '[^-]', ''))) AS ?step2317) . BIND(((?step2317 + ?targetMotifMatchRegionMatchBeginPositionMF_04072307) - 1) AS ?thisPositionOn51) . BIND(STRLEN(REPLACE(SUBSTR(?templateMotifCigarP03452MF_04072304, 1, (STRLEN(?templateMotifCigarP03452MF_04072304) - STRLEN(REPLACE(?templateMotifCigarP03452MF_04072304, CONCAT('^(?:-*[^-]){', STR(((480 - ?templateMotifSequenceMatchBeginPositionP03452305) + 1)), '}'), '')))), '[a-z]', '')) AS ?step1318) . BIND((STRLEN(SUBSTR(?targetMotifMatchCigarP03452MF_04072306, 1, (STRLEN(?targetMotifMatchCigarP03452MF_04072306) - STRLEN(REPLACE(?targetMotifMatchCigarP03452MF_04072306, CONCAT('^(?:[a-z]*(?:[A-Z]|-)){', STR(?step1318), '}'), ''))))) - STRLEN(REPLACE(SUBSTR(?targetMotifMatchCigarP03452MF_04072306, 1, (STRLEN(?targetMotifMatchCigarP03452MF_04072306) - STRLEN(REPLACE(?targetMotifMatchCigarP03452MF_04072306, CONCAT('^(?:[a-z]*(?:[A-Z]|-)){', STR(?step1318), '}'), '')))), '[^-]', ''))) AS ?step2319) . BIND(((?step2319 + ?targetMotifMatchRegionMatchBeginPositionMF_04072307) - 1) AS ?thisPositionOn52) . BIND(?this AS ?pfs1t320) . BIND(URI(CONCAT(STR(?thisSequence), '#position', STR(?thisPositionOn51))) AS ?pfsb49) . BIND(URI(CONCAT(STR(?thisSequence), '#position', STR(?thisPositionOn52))) AS ?pfse50) . FILTER (REGEX('C[ARNDCQEGHILKMFPSTWYVBZJUOX]*C', SUBSTR(?thisSequenceValue, ?thisPositionOn51, (?thisPositionOn52 - ?thisPositionOn51)))) . BIND(URI(CONCAT(STR(?this), '#MF_04072a48')) AS ?annotation48) . BIND(?this AS ?pfs47) . } OPTIONAL { ?this up:sequence ?thisSequence . ?thisSequence rdf:value ?thisSequenceValue . ?templateMotifMatch326 faldo:location ?templateMotifSequenceMatchRegionP03452327 ; edam:is_output_of ?templateMotifSequenceProfileAlignmentOperationP03452329 ; rdf:type edam:data_0869 ; rdf:value ?templateMotifCigarP03452MF_04072322 . ?templateMotifSequenceMatchRegionP03452327 faldo:begin ?templateMotifSequenceMatchBeginP03452328 . ?templateMotifSequenceMatchBeginP03452328 faldo:position ?templateMotifSequenceMatchBeginPositionP03452323 ; faldo:reference isoform:P03452-1 . ?templateMotifSequenceProfileAlignmentOperationP03452329 edam:has_input signature:MF_04072 ; rdf:type edam:operation_0300 . ?targetMotifMatch330 faldo:location ?targetMotifMatchRegionMatch331 ; edam:is_output_of ?targetMotifSequenceAlignmentOperationMF_04072333 ; rdf:type edam:data_0869 ; rdf:value ?targetMotifMatchCigarP03452MF_04072324 . ?targetMotifMatchRegionMatch331 faldo:begin ?targetMotifMatchRegionMatchBeginMF_04072332 . ?targetMotifMatchRegionMatchBeginMF_04072332 faldo:position ?targetMotifMatchRegionMatchBeginPositionMF_04072325 ; faldo:reference ?thisSequence . ?targetMotifSequenceAlignmentOperationMF_04072333 edam:has_input signature:MF_04072 ; rdf:type edam:operation_0300 . VALUES ?supertaxon321 {taxon:197912 taxon:197911} ?this up:organism ?thisOrganism . ?thisOrganism rdfs:subClassOf+ ?supertaxon321 . BIND(STRLEN(REPLACE(SUBSTR(?templateMotifCigarP03452MF_04072322, 1, (STRLEN(?templateMotifCigarP03452MF_04072322) - STRLEN(REPLACE(?templateMotifCigarP03452MF_04072322, CONCAT('^(?:-*[^-]){', STR(((59 - ?templateMotifSequenceMatchBeginPositionP03452323) + 1)), '}'), '')))), '[a-z]', '')) AS ?step1334) . BIND((STRLEN(SUBSTR(?targetMotifMatchCigarP03452MF_04072324, 1, (STRLEN(?targetMotifMatchCigarP03452MF_04072324) - STRLEN(REPLACE(?targetMotifMatchCigarP03452MF_04072324, CONCAT('^(?:[a-z]*(?:[A-Z]|-)){', STR(?step1334), '}'), ''))))) - STRLEN(REPLACE(SUBSTR(?targetMotifMatchCigarP03452MF_04072324, 1, (STRLEN(?targetMotifMatchCigarP03452MF_04072324) - STRLEN(REPLACE(?targetMotifMatchCigarP03452MF_04072324, CONCAT('^(?:[a-z]*(?:[A-Z]|-)){', STR(?step1334), '}'), '')))), '[^-]', ''))) AS ?step2335) . BIND(((?step2335 + ?targetMotifMatchRegionMatchBeginPositionMF_04072325) - 1) AS ?thisPositionOn57) . BIND(STRLEN(REPLACE(SUBSTR(?templateMotifCigarP03452MF_04072322, 1, (STRLEN(?templateMotifCigarP03452MF_04072322) - STRLEN(REPLACE(?templateMotifCigarP03452MF_04072322, CONCAT('^(?:-*[^-]){', STR(((291 - ?templateMotifSequenceMatchBeginPositionP03452323) + 1)), '}'), '')))), '[a-z]', '')) AS ?step1336) . BIND((STRLEN(SUBSTR(?targetMotifMatchCigarP03452MF_04072324, 1, (STRLEN(?targetMotifMatchCigarP03452MF_04072324) - STRLEN(REPLACE(?targetMotifMatchCigarP03452MF_04072324, CONCAT('^(?:[a-z]*(?:[A-Z]|-)){', STR(?step1336), '}'), ''))))) - STRLEN(REPLACE(SUBSTR(?targetMotifMatchCigarP03452MF_04072324, 1, (STRLEN(?targetMotifMatchCigarP03452MF_04072324) - STRLEN(REPLACE(?targetMotifMatchCigarP03452MF_04072324, CONCAT('^(?:[a-z]*(?:[A-Z]|-)){', STR(?step1336), '}'), '')))), '[^-]', ''))) AS ?step2337) . BIND(((?step2337 + ?targetMotifMatchRegionMatchBeginPositionMF_04072325) - 1) AS ?thisPositionOn58) . BIND(?this AS ?pfs1t338) . BIND(URI(CONCAT(STR(?thisSequence), '#position', STR(?thisPositionOn57))) AS ?pfsb55) . BIND(URI(CONCAT(STR(?thisSequence), '#position', STR(?thisPositionOn58))) AS ?pfse56) . FILTER (REGEX('C[ARNDCQEGHILKMFPSTWYVBZJUOX]*C', SUBSTR(?thisSequenceValue, ?thisPositionOn57, (?thisPositionOn58 - ?thisPositionOn57)))) . BIND(URI(CONCAT(STR(?this), '#MF_04072a54')) AS ?annotation54) . BIND(?this AS ?pfs53) . } OPTIONAL { ?this up:sequence ?thisSequence . ?thisSequence rdf:value ?thisSequenceValue . ?templateMotifMatch344 faldo:location ?templateMotifSequenceMatchRegionP03452345 ; edam:is_output_of ?templateMotifSequenceProfileAlignmentOperationP03452347 ; rdf:type edam:data_0869 ; rdf:value ?templateMotifCigarP03452MF_04072340 . ?templateMotifSequenceMatchRegionP03452345 faldo:begin ?templateMotifSequenceMatchBeginP03452346 . ?templateMotifSequenceMatchBeginP03452346 faldo:position ?templateMotifSequenceMatchBeginPositionP03452341 ; faldo:reference isoform:P03452-1 . ?templateMotifSequenceProfileAlignmentOperationP03452347 edam:has_input signature:MF_04072 ; rdf:type edam:operation_0300 . ?targetMotifMatch348 faldo:location ?targetMotifMatchRegionMatch349 ; edam:is_output_of ?targetMotifSequenceAlignmentOperationMF_04072351 ; rdf:type edam:data_0869 ; rdf:value ?targetMotifMatchCigarP03452MF_04072342 . ?targetMotifMatchRegionMatch349 faldo:begin ?targetMotifMatchRegionMatchBeginMF_04072350 . ?targetMotifMatchRegionMatchBeginMF_04072350 faldo:position ?targetMotifMatchRegionMatchBeginPositionMF_04072343 ; faldo:reference ?thisSequence . ?targetMotifSequenceAlignmentOperationMF_04072351 edam:has_input signature:MF_04072 ; rdf:type edam:operation_0300 . VALUES ?supertaxon339 {taxon:197912 taxon:197911} ?this up:organism ?thisOrganism . ?thisOrganism rdfs:subClassOf+ ?supertaxon339 . BIND(STRLEN(REPLACE(SUBSTR(?templateMotifCigarP03452MF_04072340, 1, (STRLEN(?templateMotifCigarP03452MF_04072340) - STRLEN(REPLACE(?templateMotifCigarP03452MF_04072340, CONCAT('^(?:-*[^-]){', STR(((72 - ?templateMotifSequenceMatchBeginPositionP03452341) + 1)), '}'), '')))), '[a-z]', '')) AS ?step1352) . BIND((STRLEN(SUBSTR(?targetMotifMatchCigarP03452MF_04072342, 1, (STRLEN(?targetMotifMatchCigarP03452MF_04072342) - STRLEN(REPLACE(?targetMotifMatchCigarP03452MF_04072342, CONCAT('^(?:[a-z]*(?:[A-Z]|-)){', STR(?step1352), '}'), ''))))) - STRLEN(REPLACE(SUBSTR(?targetMotifMatchCigarP03452MF_04072342, 1, (STRLEN(?targetMotifMatchCigarP03452MF_04072342) - STRLEN(REPLACE(?targetMotifMatchCigarP03452MF_04072342, CONCAT('^(?:[a-z]*(?:[A-Z]|-)){', STR(?step1352), '}'), '')))), '[^-]', ''))) AS ?step2353) . BIND(((?step2353 + ?targetMotifMatchRegionMatchBeginPositionMF_04072343) - 1) AS ?thisPositionOn63) . BIND(STRLEN(REPLACE(SUBSTR(?templateMotifCigarP03452MF_04072340, 1, (STRLEN(?templateMotifCigarP03452MF_04072340) - STRLEN(REPLACE(?templateMotifCigarP03452MF_04072340, CONCAT('^(?:-*[^-]){', STR(((84 - ?templateMotifSequenceMatchBeginPositionP03452341) + 1)), '}'), '')))), '[a-z]', '')) AS ?step1354) . BIND((STRLEN(SUBSTR(?targetMotifMatchCigarP03452MF_04072342, 1, (STRLEN(?targetMotifMatchCigarP03452MF_04072342) - STRLEN(REPLACE(?targetMotifMatchCigarP03452MF_04072342, CONCAT('^(?:[a-z]*(?:[A-Z]|-)){', STR(?step1354), '}'), ''))))) - STRLEN(REPLACE(SUBSTR(?targetMotifMatchCigarP03452MF_04072342, 1, (STRLEN(?targetMotifMatchCigarP03452MF_04072342) - STRLEN(REPLACE(?targetMotifMatchCigarP03452MF_04072342, CONCAT('^(?:[a-z]*(?:[A-Z]|-)){', STR(?step1354), '}'), '')))), '[^-]', ''))) AS ?step2355) . BIND(((?step2355 + ?targetMotifMatchRegionMatchBeginPositionMF_04072343) - 1) AS ?thisPositionOn64) . BIND(?this AS ?pfs1t356) . BIND(URI(CONCAT(STR(?thisSequence), '#position', STR(?thisPositionOn63))) AS ?pfsb61) . BIND(URI(CONCAT(STR(?thisSequence), '#position', STR(?thisPositionOn64))) AS ?pfse62) . FILTER (REGEX('C[ARNDCQEGHILKMFPSTWYVBZJUOX]*C', SUBSTR(?thisSequenceValue, ?thisPositionOn63, (?thisPositionOn64 - ?thisPositionOn63)))) . BIND(URI(CONCAT(STR(?this), '#MF_04072a60')) AS ?annotation60) . BIND(?this AS ?pfs59) . } OPTIONAL { ?this up:sequence ?thisSequence . ?thisSequence rdf:value ?thisSequenceValue . ?templateMotifMatch362 faldo:location ?templateMotifSequenceMatchRegionP03452363 ; edam:is_output_of ?templateMotifSequenceProfileAlignmentOperationP03452365 ; rdf:type edam:data_0869 ; rdf:value ?templateMotifCigarP03452MF_04072358 . ?templateMotifSequenceMatchRegionP03452363 faldo:begin ?templateMotifSequenceMatchBeginP03452364 . ?templateMotifSequenceMatchBeginP03452364 faldo:position ?templateMotifSequenceMatchBeginPositionP03452359 ; faldo:reference isoform:P03452-1 . ?templateMotifSequenceProfileAlignmentOperationP03452365 edam:has_input signature:MF_04072 ; rdf:type edam:operation_0300 . ?targetMotifMatch366 faldo:location ?targetMotifMatchRegionMatch367 ; edam:is_output_of ?targetMotifSequenceAlignmentOperationMF_04072369 ; rdf:type edam:data_0869 ; rdf:value ?targetMotifMatchCigarP03452MF_04072360 . ?targetMotifMatchRegionMatch367 faldo:begin ?targetMotifMatchRegionMatchBeginMF_04072368 . ?targetMotifMatchRegionMatchBeginMF_04072368 faldo:position ?targetMotifMatchRegionMatchBeginPositionMF_04072361 ; faldo:reference ?thisSequence . ?targetMotifSequenceAlignmentOperationMF_04072369 edam:has_input signature:MF_04072 ; rdf:type edam:operation_0300 . VALUES ?supertaxon357 {taxon:197912 taxon:197911} ?this up:organism ?thisOrganism . ?thisOrganism rdfs:subClassOf+ ?supertaxon357 . BIND(STRLEN(REPLACE(SUBSTR(?templateMotifCigarP03452MF_04072358, 1, (STRLEN(?templateMotifCigarP03452MF_04072358) - STRLEN(REPLACE(?templateMotifCigarP03452MF_04072358, CONCAT('^(?:-*[^-]){', STR(((107 - ?templateMotifSequenceMatchBeginPositionP03452359) + 1)), '}'), '')))), '[a-z]', '')) AS ?step1370) . BIND((STRLEN(SUBSTR(?targetMotifMatchCigarP03452MF_04072360, 1, (STRLEN(?targetMotifMatchCigarP03452MF_04072360) - STRLEN(REPLACE(?targetMotifMatchCigarP03452MF_04072360, CONCAT('^(?:[a-z]*(?:[A-Z]|-)){', STR(?step1370), '}'), ''))))) - STRLEN(REPLACE(SUBSTR(?targetMotifMatchCigarP03452MF_04072360, 1, (STRLEN(?targetMotifMatchCigarP03452MF_04072360) - STRLEN(REPLACE(?targetMotifMatchCigarP03452MF_04072360, CONCAT('^(?:[a-z]*(?:[A-Z]|-)){', STR(?step1370), '}'), '')))), '[^-]', ''))) AS ?step2371) . BIND(((?step2371 + ?targetMotifMatchRegionMatchBeginPositionMF_04072361) - 1) AS ?thisPositionOn69) . BIND(STRLEN(REPLACE(SUBSTR(?templateMotifCigarP03452MF_04072358, 1, (STRLEN(?templateMotifCigarP03452MF_04072358) - STRLEN(REPLACE(?templateMotifCigarP03452MF_04072358, CONCAT('^(?:-*[^-]){', STR(((152 - ?templateMotifSequenceMatchBeginPositionP03452359) + 1)), '}'), '')))), '[a-z]', '')) AS ?step1372) . BIND((STRLEN(SUBSTR(?targetMotifMatchCigarP03452MF_04072360, 1, (STRLEN(?targetMotifMatchCigarP03452MF_04072360) - STRLEN(REPLACE(?targetMotifMatchCigarP03452MF_04072360, CONCAT('^(?:[a-z]*(?:[A-Z]|-)){', STR(?step1372), '}'), ''))))) - STRLEN(REPLACE(SUBSTR(?targetMotifMatchCigarP03452MF_04072360, 1, (STRLEN(?targetMotifMatchCigarP03452MF_04072360) - STRLEN(REPLACE(?targetMotifMatchCigarP03452MF_04072360, CONCAT('^(?:[a-z]*(?:[A-Z]|-)){', STR(?step1372), '}'), '')))), '[^-]', ''))) AS ?step2373) . BIND(((?step2373 + ?targetMotifMatchRegionMatchBeginPositionMF_04072361) - 1) AS ?thisPositionOn70) . BIND(?this AS ?pfs1t374) . BIND(URI(CONCAT(STR(?thisSequence), '#position', STR(?thisPositionOn69))) AS ?pfsb67) . BIND(URI(CONCAT(STR(?thisSequence), '#position', STR(?thisPositionOn70))) AS ?pfse68) . FILTER (REGEX('C[ARNDCQEGHILKMFPSTWYVBZJUOX]*C', SUBSTR(?thisSequenceValue, ?thisPositionOn69, (?thisPositionOn70 - ?thisPositionOn69)))) . BIND(URI(CONCAT(STR(?this), '#MF_04072a66')) AS ?annotation66) . BIND(?this AS ?pfs65) . } OPTIONAL { ?this up:sequence ?thisSequence . ?thisSequence rdf:value ?thisSequenceValue . ?templateMotifMatch380 faldo:location ?templateMotifSequenceMatchRegionP03452381 ; edam:is_output_of ?templateMotifSequenceProfileAlignmentOperationP03452383 ; rdf:type edam:data_0869 ; rdf:value ?templateMotifCigarP03452MF_04072376 . ?templateMotifSequenceMatchRegionP03452381 faldo:begin ?templateMotifSequenceMatchBeginP03452382 . ?templateMotifSequenceMatchBeginP03452382 faldo:position ?templateMotifSequenceMatchBeginPositionP03452377 ; faldo:reference isoform:P03452-1 . ?templateMotifSequenceProfileAlignmentOperationP03452383 edam:has_input signature:MF_04072 ; rdf:type edam:operation_0300 . ?targetMotifMatch384 faldo:location ?targetMotifMatchRegionMatch385 ; edam:is_output_of ?targetMotifSequenceAlignmentOperationMF_04072387 ; rdf:type edam:data_0869 ; rdf:value ?targetMotifMatchCigarP03452MF_04072378 . ?targetMotifMatchRegionMatch385 faldo:begin ?targetMotifMatchRegionMatchBeginMF_04072386 . ?targetMotifMatchRegionMatchBeginMF_04072386 faldo:position ?targetMotifMatchRegionMatchBeginPositionMF_04072379 ; faldo:reference ?thisSequence . ?targetMotifSequenceAlignmentOperationMF_04072387 edam:has_input signature:MF_04072 ; rdf:type edam:operation_0300 . VALUES ?supertaxon375 {taxon:197912 taxon:197911} ?this up:organism ?thisOrganism . ?thisOrganism rdfs:subClassOf+ ?supertaxon375 . BIND(STRLEN(REPLACE(SUBSTR(?templateMotifCigarP03452MF_04072376, 1, (STRLEN(?templateMotifCigarP03452MF_04072376) - STRLEN(REPLACE(?templateMotifCigarP03452MF_04072376, CONCAT('^(?:-*[^-]){', STR(((295 - ?templateMotifSequenceMatchBeginPositionP03452377) + 1)), '}'), '')))), '[a-z]', '')) AS ?step1388) . BIND((STRLEN(SUBSTR(?targetMotifMatchCigarP03452MF_04072378, 1, (STRLEN(?targetMotifMatchCigarP03452MF_04072378) - STRLEN(REPLACE(?targetMotifMatchCigarP03452MF_04072378, CONCAT('^(?:[a-z]*(?:[A-Z]|-)){', STR(?step1388), '}'), ''))))) - STRLEN(REPLACE(SUBSTR(?targetMotifMatchCigarP03452MF_04072378, 1, (STRLEN(?targetMotifMatchCigarP03452MF_04072378) - STRLEN(REPLACE(?targetMotifMatchCigarP03452MF_04072378, CONCAT('^(?:[a-z]*(?:[A-Z]|-)){', STR(?step1388), '}'), '')))), '[^-]', ''))) AS ?step2389) . BIND(((?step2389 + ?targetMotifMatchRegionMatchBeginPositionMF_04072379) - 1) AS ?thisPositionOn75) . BIND(STRLEN(REPLACE(SUBSTR(?templateMotifCigarP03452MF_04072376, 1, (STRLEN(?templateMotifCigarP03452MF_04072376) - STRLEN(REPLACE(?templateMotifCigarP03452MF_04072376, CONCAT('^(?:-*[^-]){', STR(((319 - ?templateMotifSequenceMatchBeginPositionP03452377) + 1)), '}'), '')))), '[a-z]', '')) AS ?step1390) . BIND((STRLEN(SUBSTR(?targetMotifMatchCigarP03452MF_04072378, 1, (STRLEN(?targetMotifMatchCigarP03452MF_04072378) - STRLEN(REPLACE(?targetMotifMatchCigarP03452MF_04072378, CONCAT('^(?:[a-z]*(?:[A-Z]|-)){', STR(?step1390), '}'), ''))))) - STRLEN(REPLACE(SUBSTR(?targetMotifMatchCigarP03452MF_04072378, 1, (STRLEN(?targetMotifMatchCigarP03452MF_04072378) - STRLEN(REPLACE(?targetMotifMatchCigarP03452MF_04072378, CONCAT('^(?:[a-z]*(?:[A-Z]|-)){', STR(?step1390), '}'), '')))), '[^-]', ''))) AS ?step2391) . BIND(((?step2391 + ?targetMotifMatchRegionMatchBeginPositionMF_04072379) - 1) AS ?thisPositionOn76) . BIND(?this AS ?pfs1t392) . BIND(URI(CONCAT(STR(?thisSequence), '#position', STR(?thisPositionOn75))) AS ?pfsb73) . BIND(URI(CONCAT(STR(?thisSequence), '#position', STR(?thisPositionOn76))) AS ?pfse74) . FILTER (REGEX('C[ARNDCQEGHILKMFPSTWYVBZJUOX]*C', SUBSTR(?thisSequenceValue, ?thisPositionOn75, (?thisPositionOn76 - ?thisPositionOn75)))) . BIND(URI(CONCAT(STR(?this), '#MF_04072a72')) AS ?annotation72) . BIND(?this AS ?pfs71) . } OPTIONAL { ?this up:sequence ?thisSequence . ?thisSequence rdf:value ?thisSequenceValue . ?templateMotifMatch398 faldo:location ?templateMotifSequenceMatchRegionP03452399 ; edam:is_output_of ?templateMotifSequenceProfileAlignmentOperationP03452401 ; rdf:type edam:data_0869 ; rdf:value ?templateMotifCigarP03452MF_04072394 . ?templateMotifSequenceMatchRegionP03452399 faldo:begin ?templateMotifSequenceMatchBeginP03452400 . ?templateMotifSequenceMatchBeginP03452400 faldo:position ?templateMotifSequenceMatchBeginPositionP03452395 ; faldo:reference isoform:P03452-1 . ?templateMotifSequenceProfileAlignmentOperationP03452401 edam:has_input signature:MF_04072 ; rdf:type edam:operation_0300 . ?targetMotifMatch402 faldo:location ?targetMotifMatchRegionMatch403 ; edam:is_output_of ?targetMotifSequenceAlignmentOperationMF_04072405 ; rdf:type edam:data_0869 ; rdf:value ?targetMotifMatchCigarP03452MF_04072396 . ?targetMotifMatchRegionMatch403 faldo:begin ?targetMotifMatchRegionMatchBeginMF_04072404 . ?targetMotifMatchRegionMatchBeginMF_04072404 faldo:position ?targetMotifMatchRegionMatchBeginPositionMF_04072397 ; faldo:reference ?thisSequence . ?targetMotifSequenceAlignmentOperationMF_04072405 edam:has_input signature:MF_04072 ; rdf:type edam:operation_0300 . VALUES ?supertaxon393 {taxon:197912 taxon:197911} ?this up:organism ?thisOrganism . ?thisOrganism rdfs:subClassOf+ ?supertaxon393 . BIND(STRLEN(REPLACE(SUBSTR(?templateMotifCigarP03452MF_04072394, 1, (STRLEN(?templateMotifCigarP03452MF_04072394) - STRLEN(REPLACE(?templateMotifCigarP03452MF_04072394, CONCAT('^(?:-*[^-]){', STR(((487 - ?templateMotifSequenceMatchBeginPositionP03452395) + 1)), '}'), '')))), '[a-z]', '')) AS ?step1406) . BIND((STRLEN(SUBSTR(?targetMotifMatchCigarP03452MF_04072396, 1, (STRLEN(?targetMotifMatchCigarP03452MF_04072396) - STRLEN(REPLACE(?targetMotifMatchCigarP03452MF_04072396, CONCAT('^(?:[a-z]*(?:[A-Z]|-)){', STR(?step1406), '}'), ''))))) - STRLEN(REPLACE(SUBSTR(?targetMotifMatchCigarP03452MF_04072396, 1, (STRLEN(?targetMotifMatchCigarP03452MF_04072396) - STRLEN(REPLACE(?targetMotifMatchCigarP03452MF_04072396, CONCAT('^(?:[a-z]*(?:[A-Z]|-)){', STR(?step1406), '}'), '')))), '[^-]', ''))) AS ?step2407) . BIND(((?step2407 + ?targetMotifMatchRegionMatchBeginPositionMF_04072397) - 1) AS ?thisPositionOn81) . BIND(STRLEN(REPLACE(SUBSTR(?templateMotifCigarP03452MF_04072394, 1, (STRLEN(?templateMotifCigarP03452MF_04072394) - STRLEN(REPLACE(?templateMotifCigarP03452MF_04072394, CONCAT('^(?:-*[^-]){', STR(((491 - ?templateMotifSequenceMatchBeginPositionP03452395) + 1)), '}'), '')))), '[a-z]', '')) AS ?step1408) . BIND((STRLEN(SUBSTR(?targetMotifMatchCigarP03452MF_04072396, 1, (STRLEN(?targetMotifMatchCigarP03452MF_04072396) - STRLEN(REPLACE(?targetMotifMatchCigarP03452MF_04072396, CONCAT('^(?:[a-z]*(?:[A-Z]|-)){', STR(?step1408), '}'), ''))))) - STRLEN(REPLACE(SUBSTR(?targetMotifMatchCigarP03452MF_04072396, 1, (STRLEN(?targetMotifMatchCigarP03452MF_04072396) - STRLEN(REPLACE(?targetMotifMatchCigarP03452MF_04072396, CONCAT('^(?:[a-z]*(?:[A-Z]|-)){', STR(?step1408), '}'), '')))), '[^-]', ''))) AS ?step2409) . BIND(((?step2409 + ?targetMotifMatchRegionMatchBeginPositionMF_04072397) - 1) AS ?thisPositionOn82) . BIND(?this AS ?pfs1t410) . BIND(URI(CONCAT(STR(?thisSequence), '#position', STR(?thisPositionOn81))) AS ?pfsb79) . BIND(URI(CONCAT(STR(?thisSequence), '#position', STR(?thisPositionOn82))) AS ?pfse80) . FILTER (REGEX('C[ARNDCQEGHILKMFPSTWYVBZJUOX]*C', SUBSTR(?thisSequenceValue, ?thisPositionOn81, (?thisPositionOn82 - ?thisPositionOn81)))) . BIND(URI(CONCAT(STR(?this), '#MF_04072a78')) AS ?annotation78) . BIND(?this AS ?pfs77) . } OPTIONAL { ?this up:sequence ?thisSequence . ?thisSequence rdf:value ?thisSequenceValue . ?templateMotifMatch415 faldo:location ?templateMotifSequenceMatchRegionP03465416 ; edam:is_output_of ?templateMotifSequenceProfileAlignmentOperationP03465418 ; rdf:type edam:data_0869 ; rdf:value ?templateMotifCigarP03465MF_04072411 . ?templateMotifSequenceMatchRegionP03465416 faldo:begin ?templateMotifSequenceMatchBeginP03465417 . ?templateMotifSequenceMatchBeginP03465417 faldo:position ?templateMotifSequenceMatchBeginPositionP03465412 ; faldo:reference isoform:P03465-1 . ?templateMotifSequenceProfileAlignmentOperationP03465418 edam:has_input signature:MF_04072 ; rdf:type edam:operation_0300 . ?targetMotifMatch419 faldo:location ?targetMotifMatchRegionMatch420 ; edam:is_output_of ?targetMotifSequenceAlignmentOperationMF_04072422 ; rdf:type edam:data_0869 ; rdf:value ?targetMotifMatchCigarP03465MF_04072413 . ?targetMotifMatchRegionMatch420 faldo:begin ?targetMotifMatchRegionMatchBeginMF_04072421 . ?targetMotifMatchRegionMatchBeginMF_04072421 faldo:position ?targetMotifMatchRegionMatchBeginPositionMF_04072414 ; faldo:reference ?thisSequence . ?targetMotifSequenceAlignmentOperationMF_04072422 edam:has_input signature:MF_04072 ; rdf:type edam:operation_0300 . ?this up:organism ?thisOrganism . ?thisOrganism rdfs:subClassOf+ taxon:197913 . BIND(STRLEN(REPLACE(SUBSTR(?templateMotifCigarP03465MF_04072411, 1, (STRLEN(?templateMotifCigarP03465MF_04072411) - STRLEN(REPLACE(?templateMotifCigarP03465MF_04072411, CONCAT('^(?:-*[^-]){', STR(((15 - ?templateMotifSequenceMatchBeginPositionP03465412) + 1)), '}'), '')))), '[a-z]', '')) AS ?step1423) . BIND((STRLEN(SUBSTR(?targetMotifMatchCigarP03465MF_04072413, 1, (STRLEN(?targetMotifMatchCigarP03465MF_04072413) - STRLEN(REPLACE(?targetMotifMatchCigarP03465MF_04072413, CONCAT('^(?:[a-z]*(?:[A-Z]|-)){', STR(?step1423), '}'), ''))))) - STRLEN(REPLACE(SUBSTR(?targetMotifMatchCigarP03465MF_04072413, 1, (STRLEN(?targetMotifMatchCigarP03465MF_04072413) - STRLEN(REPLACE(?targetMotifMatchCigarP03465MF_04072413, CONCAT('^(?:[a-z]*(?:[A-Z]|-)){', STR(?step1423), '}'), '')))), '[^-]', ''))) AS ?step2424) . BIND(((?step2424 + ?targetMotifMatchRegionMatchBeginPositionMF_04072414) - 1) AS ?thisPositionOn87) . BIND(STRLEN(REPLACE(SUBSTR(?templateMotifCigarP03465MF_04072411, 1, (STRLEN(?templateMotifCigarP03465MF_04072411) - STRLEN(REPLACE(?templateMotifCigarP03465MF_04072411, CONCAT('^(?:-*[^-]){', STR(((446 - ?templateMotifSequenceMatchBeginPositionP03465412) + 1)), '}'), '')))), '[a-z]', '')) AS ?step1425) . BIND((STRLEN(SUBSTR(?targetMotifMatchCigarP03465MF_04072413, 1, (STRLEN(?targetMotifMatchCigarP03465MF_04072413) - STRLEN(REPLACE(?targetMotifMatchCigarP03465MF_04072413, CONCAT('^(?:[a-z]*(?:[A-Z]|-)){', STR(?step1425), '}'), ''))))) - STRLEN(REPLACE(SUBSTR(?targetMotifMatchCigarP03465MF_04072413, 1, (STRLEN(?targetMotifMatchCigarP03465MF_04072413) - STRLEN(REPLACE(?targetMotifMatchCigarP03465MF_04072413, CONCAT('^(?:[a-z]*(?:[A-Z]|-)){', STR(?step1425), '}'), '')))), '[^-]', ''))) AS ?step2426) . BIND(((?step2426 + ?targetMotifMatchRegionMatchBeginPositionMF_04072414) - 1) AS ?thisPositionOn88) . BIND(?this AS ?pfs2t427) . BIND(URI(CONCAT(STR(?thisSequence), '#position', STR(?thisPositionOn87))) AS ?pfsb85) . BIND(URI(CONCAT(STR(?thisSequence), '#position', STR(?thisPositionOn88))) AS ?pfse86) . FILTER ((BOUND(?thisPositionOn87) && BOUND(?thisPositionOn88))) . BIND(URI(CONCAT(STR(?this), '#MF_04072a84')) AS ?annotation84) . BIND(?this AS ?pfs83) . } OPTIONAL { ?this up:sequence ?thisSequence . ?thisSequence rdf:value ?thisSequenceValue . ?templateMotifMatch432 faldo:location ?templateMotifSequenceMatchRegionP03465433 ; edam:is_output_of ?templateMotifSequenceProfileAlignmentOperationP03465435 ; rdf:type edam:data_0869 ; rdf:value ?templateMotifCigarP03465MF_04072428 . ?templateMotifSequenceMatchRegionP03465433 faldo:begin ?templateMotifSequenceMatchBeginP03465434 . ?templateMotifSequenceMatchBeginP03465434 faldo:position ?templateMotifSequenceMatchBeginPositionP03465429 ; faldo:reference isoform:P03465-1 . ?templateMotifSequenceProfileAlignmentOperationP03465435 edam:has_input signature:MF_04072 ; rdf:type edam:operation_0300 . ?targetMotifMatch436 faldo:location ?targetMotifMatchRegionMatch437 ; edam:is_output_of ?targetMotifSequenceAlignmentOperationMF_04072439 ; rdf:type edam:data_0869 ; rdf:value ?targetMotifMatchCigarP03465MF_04072430 . ?targetMotifMatchRegionMatch437 faldo:begin ?targetMotifMatchRegionMatchBeginMF_04072438 . ?targetMotifMatchRegionMatchBeginMF_04072438 faldo:position ?targetMotifMatchRegionMatchBeginPositionMF_04072431 ; faldo:reference ?thisSequence . ?targetMotifSequenceAlignmentOperationMF_04072439 edam:has_input signature:MF_04072 ; rdf:type edam:operation_0300 . ?this up:organism ?thisOrganism . ?thisOrganism rdfs:subClassOf+ taxon:197913 . BIND(STRLEN(REPLACE(SUBSTR(?templateMotifCigarP03465MF_04072428, 1, (STRLEN(?templateMotifCigarP03465MF_04072428) - STRLEN(REPLACE(?templateMotifCigarP03465MF_04072428, CONCAT('^(?:-*[^-]){', STR(((447 - ?templateMotifSequenceMatchBeginPositionP03465429) + 1)), '}'), '')))), '[a-z]', '')) AS ?step1440) . BIND((STRLEN(SUBSTR(?targetMotifMatchCigarP03465MF_04072430, 1, (STRLEN(?targetMotifMatchCigarP03465MF_04072430) - STRLEN(REPLACE(?targetMotifMatchCigarP03465MF_04072430, CONCAT('^(?:[a-z]*(?:[A-Z]|-)){', STR(?step1440), '}'), ''))))) - STRLEN(REPLACE(SUBSTR(?targetMotifMatchCigarP03465MF_04072430, 1, (STRLEN(?targetMotifMatchCigarP03465MF_04072430) - STRLEN(REPLACE(?targetMotifMatchCigarP03465MF_04072430, CONCAT('^(?:[a-z]*(?:[A-Z]|-)){', STR(?step1440), '}'), '')))), '[^-]', ''))) AS ?step2441) . BIND(((?step2441 + ?targetMotifMatchRegionMatchBeginPositionMF_04072431) - 1) AS ?thisPositionOn93) . BIND(STRLEN(REPLACE(SUBSTR(?templateMotifCigarP03465MF_04072428, 1, (STRLEN(?templateMotifCigarP03465MF_04072428) - STRLEN(REPLACE(?templateMotifCigarP03465MF_04072428, CONCAT('^(?:-*[^-]){', STR(((655 - ?templateMotifSequenceMatchBeginPositionP03465429) + 1)), '}'), '')))), '[a-z]', '')) AS ?step1442) . BIND((STRLEN(SUBSTR(?targetMotifMatchCigarP03465MF_04072430, 1, (STRLEN(?targetMotifMatchCigarP03465MF_04072430) - STRLEN(REPLACE(?targetMotifMatchCigarP03465MF_04072430, CONCAT('^(?:[a-z]*(?:[A-Z]|-)){', STR(?step1442), '}'), ''))))) - STRLEN(REPLACE(SUBSTR(?targetMotifMatchCigarP03465MF_04072430, 1, (STRLEN(?targetMotifMatchCigarP03465MF_04072430) - STRLEN(REPLACE(?targetMotifMatchCigarP03465MF_04072430, CONCAT('^(?:[a-z]*(?:[A-Z]|-)){', STR(?step1442), '}'), '')))), '[^-]', ''))) AS ?step2443) . BIND(((?step2443 + ?targetMotifMatchRegionMatchBeginPositionMF_04072431) - 1) AS ?thisPositionOn94) . BIND(?this AS ?pfs2t444) . BIND(URI(CONCAT(STR(?thisSequence), '#position', STR(?thisPositionOn93))) AS ?pfsb91) . BIND(URI(CONCAT(STR(?thisSequence), '#position', STR(?thisPositionOn94))) AS ?pfse92) . FILTER ((BOUND(?thisPositionOn93) && BOUND(?thisPositionOn94))) . BIND(URI(CONCAT(STR(?this), '#MF_04072a90')) AS ?annotation90) . BIND(?this AS ?pfs89) . } OPTIONAL { ?this up:sequence ?thisSequence . ?thisSequence rdf:value ?thisSequenceValue . ?templateMotifMatch449 faldo:location ?templateMotifSequenceMatchRegionP03465450 ; edam:is_output_of ?templateMotifSequenceProfileAlignmentOperationP03465452 ; rdf:type edam:data_0869 ; rdf:value ?templateMotifCigarP03465MF_04072445 . ?templateMotifSequenceMatchRegionP03465450 faldo:begin ?templateMotifSequenceMatchBeginP03465451 . ?templateMotifSequenceMatchBeginP03465451 faldo:position ?templateMotifSequenceMatchBeginPositionP03465446 ; faldo:reference isoform:P03465-1 . ?templateMotifSequenceProfileAlignmentOperationP03465452 edam:has_input signature:MF_04072 ; rdf:type edam:operation_0300 . ?targetMotifMatch453 faldo:location ?targetMotifMatchRegionMatch454 ; edam:is_output_of ?targetMotifSequenceAlignmentOperationMF_04072456 ; rdf:type edam:data_0869 ; rdf:value ?targetMotifMatchCigarP03465MF_04072447 . ?targetMotifMatchRegionMatch454 faldo:begin ?targetMotifMatchRegionMatchBeginMF_04072455 . ?targetMotifMatchRegionMatchBeginMF_04072455 faldo:position ?targetMotifMatchRegionMatchBeginPositionMF_04072448 ; faldo:reference ?thisSequence . ?targetMotifSequenceAlignmentOperationMF_04072456 edam:has_input signature:MF_04072 ; rdf:type edam:operation_0300 . ?this up:organism ?thisOrganism . ?thisOrganism rdfs:subClassOf+ taxon:197913 . BIND(STRLEN(REPLACE(SUBSTR(?templateMotifCigarP03465MF_04072445, 1, (STRLEN(?templateMotifCigarP03465MF_04072445) - STRLEN(REPLACE(?templateMotifCigarP03465MF_04072445, CONCAT('^(?:-*[^-]){', STR(((15 - ?templateMotifSequenceMatchBeginPositionP03465446) + 1)), '}'), '')))), '[a-z]', '')) AS ?step1457) . BIND((STRLEN(SUBSTR(?targetMotifMatchCigarP03465MF_04072447, 1, (STRLEN(?targetMotifMatchCigarP03465MF_04072447) - STRLEN(REPLACE(?targetMotifMatchCigarP03465MF_04072447, CONCAT('^(?:[a-z]*(?:[A-Z]|-)){', STR(?step1457), '}'), ''))))) - STRLEN(REPLACE(SUBSTR(?targetMotifMatchCigarP03465MF_04072447, 1, (STRLEN(?targetMotifMatchCigarP03465MF_04072447) - STRLEN(REPLACE(?targetMotifMatchCigarP03465MF_04072447, CONCAT('^(?:[a-z]*(?:[A-Z]|-)){', STR(?step1457), '}'), '')))), '[^-]', ''))) AS ?step2458) . BIND(((?step2458 + ?targetMotifMatchRegionMatchBeginPositionMF_04072448) - 1) AS ?thisPositionOn99) . BIND(STRLEN(REPLACE(SUBSTR(?templateMotifCigarP03465MF_04072445, 1, (STRLEN(?templateMotifCigarP03465MF_04072445) - STRLEN(REPLACE(?templateMotifCigarP03465MF_04072445, CONCAT('^(?:-*[^-]){', STR(((40 - ?templateMotifSequenceMatchBeginPositionP03465446) + 1)), '}'), '')))), '[a-z]', '')) AS ?step1459) . BIND((STRLEN(SUBSTR(?targetMotifMatchCigarP03465MF_04072447, 1, (STRLEN(?targetMotifMatchCigarP03465MF_04072447) - STRLEN(REPLACE(?targetMotifMatchCigarP03465MF_04072447, CONCAT('^(?:[a-z]*(?:[A-Z]|-)){', STR(?step1459), '}'), ''))))) - STRLEN(REPLACE(SUBSTR(?targetMotifMatchCigarP03465MF_04072447, 1, (STRLEN(?targetMotifMatchCigarP03465MF_04072447) - STRLEN(REPLACE(?targetMotifMatchCigarP03465MF_04072447, CONCAT('^(?:[a-z]*(?:[A-Z]|-)){', STR(?step1459), '}'), '')))), '[^-]', ''))) AS ?step2460) . BIND(((?step2460 + ?targetMotifMatchRegionMatchBeginPositionMF_04072448) - 1) AS ?thisPositionOn100) . BIND(?this AS ?pfs2t461) . BIND(URI(CONCAT(STR(?thisSequence), '#position', STR(?thisPositionOn99))) AS ?pfsb97) . BIND(URI(CONCAT(STR(?thisSequence), '#position', STR(?thisPositionOn100))) AS ?pfse98) . FILTER ((BOUND(?thisPositionOn99) && BOUND(?thisPositionOn100))) . BIND(URI(CONCAT(STR(?this), '#MF_04072a96')) AS ?annotation96) . BIND(?this AS ?pfs95) . } OPTIONAL { ?this up:sequence ?thisSequence . ?thisSequence rdf:value ?thisSequenceValue . ?templateMotifMatch466 faldo:location ?templateMotifSequenceMatchRegionP03465467 ; edam:is_output_of ?templateMotifSequenceProfileAlignmentOperationP03465469 ; rdf:type edam:data_0869 ; rdf:value ?templateMotifCigarP03465MF_04072462 . ?templateMotifSequenceMatchRegionP03465467 faldo:begin ?templateMotifSequenceMatchBeginP03465468 . ?templateMotifSequenceMatchBeginP03465468 faldo:position ?templateMotifSequenceMatchBeginPositionP03465463 ; faldo:reference isoform:P03465-1 . ?templateMotifSequenceProfileAlignmentOperationP03465469 edam:has_input signature:MF_04072 ; rdf:type edam:operation_0300 . ?targetMotifMatch470 faldo:location ?targetMotifMatchRegionMatch471 ; edam:is_output_of ?targetMotifSequenceAlignmentOperationMF_04072473 ; rdf:type edam:data_0869 ; rdf:value ?targetMotifMatchCigarP03465MF_04072464 . ?targetMotifMatchRegionMatch471 faldo:begin ?targetMotifMatchRegionMatchBeginMF_04072472 . ?targetMotifMatchRegionMatchBeginMF_04072472 faldo:position ?targetMotifMatchRegionMatchBeginPositionMF_04072465 ; faldo:reference ?thisSequence . ?targetMotifSequenceAlignmentOperationMF_04072473 edam:has_input signature:MF_04072 ; rdf:type edam:operation_0300 . ?this up:organism ?thisOrganism . ?thisOrganism rdfs:subClassOf+ taxon:197913 . BIND(STRLEN(REPLACE(SUBSTR(?templateMotifCigarP03465MF_04072462, 1, (STRLEN(?templateMotifCigarP03465MF_04072462) - STRLEN(REPLACE(?templateMotifCigarP03465MF_04072462, CONCAT('^(?:-*[^-]){', STR(((41 - ?templateMotifSequenceMatchBeginPositionP03465463) + 1)), '}'), '')))), '[a-z]', '')) AS ?step1474) . BIND((STRLEN(SUBSTR(?targetMotifMatchCigarP03465MF_04072464, 1, (STRLEN(?targetMotifMatchCigarP03465MF_04072464) - STRLEN(REPLACE(?targetMotifMatchCigarP03465MF_04072464, CONCAT('^(?:[a-z]*(?:[A-Z]|-)){', STR(?step1474), '}'), ''))))) - STRLEN(REPLACE(SUBSTR(?targetMotifMatchCigarP03465MF_04072464, 1, (STRLEN(?targetMotifMatchCigarP03465MF_04072464) - STRLEN(REPLACE(?targetMotifMatchCigarP03465MF_04072464, CONCAT('^(?:[a-z]*(?:[A-Z]|-)){', STR(?step1474), '}'), '')))), '[^-]', ''))) AS ?step2475) . BIND(((?step2475 + ?targetMotifMatchRegionMatchBeginPositionMF_04072465) - 1) AS ?thisPositionOn105) . BIND(STRLEN(REPLACE(SUBSTR(?templateMotifCigarP03465MF_04072462, 1, (STRLEN(?templateMotifCigarP03465MF_04072462) - STRLEN(REPLACE(?templateMotifCigarP03465MF_04072462, CONCAT('^(?:-*[^-]){', STR(((150 - ?templateMotifSequenceMatchBeginPositionP03465463) + 1)), '}'), '')))), '[a-z]', '')) AS ?step1476) . BIND((STRLEN(SUBSTR(?targetMotifMatchCigarP03465MF_04072464, 1, (STRLEN(?targetMotifMatchCigarP03465MF_04072464) - STRLEN(REPLACE(?targetMotifMatchCigarP03465MF_04072464, CONCAT('^(?:[a-z]*(?:[A-Z]|-)){', STR(?step1476), '}'), ''))))) - STRLEN(REPLACE(SUBSTR(?targetMotifMatchCigarP03465MF_04072464, 1, (STRLEN(?targetMotifMatchCigarP03465MF_04072464) - STRLEN(REPLACE(?targetMotifMatchCigarP03465MF_04072464, CONCAT('^(?:[a-z]*(?:[A-Z]|-)){', STR(?step1476), '}'), '')))), '[^-]', ''))) AS ?step2477) . BIND(((?step2477 + ?targetMotifMatchRegionMatchBeginPositionMF_04072465) - 1) AS ?thisPositionOn106) . BIND(?this AS ?pfs2t478) . BIND(URI(CONCAT(STR(?thisSequence), '#position', STR(?thisPositionOn105))) AS ?pfsb103) . BIND(URI(CONCAT(STR(?thisSequence), '#position', STR(?thisPositionOn106))) AS ?pfse104) . FILTER ((BOUND(?thisPositionOn105) && BOUND(?thisPositionOn106))) . BIND(URI(CONCAT(STR(?this), '#MF_04072a102')) AS ?annotation102) . BIND(?this AS ?pfs101) . } OPTIONAL { ?this up:sequence ?thisSequence . ?thisSequence rdf:value ?thisSequenceValue . ?templateMotifMatch483 faldo:location ?templateMotifSequenceMatchRegionP03465484 ; edam:is_output_of ?templateMotifSequenceProfileAlignmentOperationP03465486 ; rdf:type edam:data_0869 ; rdf:value ?templateMotifCigarP03465MF_04072479 . ?templateMotifSequenceMatchRegionP03465484 faldo:begin ?templateMotifSequenceMatchBeginP03465485 . ?templateMotifSequenceMatchBeginP03465485 faldo:position ?templateMotifSequenceMatchBeginPositionP03465480 ; faldo:reference isoform:P03465-1 . ?templateMotifSequenceProfileAlignmentOperationP03465486 edam:has_input signature:MF_04072 ; rdf:type edam:operation_0300 . ?targetMotifMatch487 faldo:location ?targetMotifMatchRegionMatch488 ; edam:is_output_of ?targetMotifSequenceAlignmentOperationMF_04072490 ; rdf:type edam:data_0869 ; rdf:value ?targetMotifMatchCigarP03465MF_04072481 . ?targetMotifMatchRegionMatch488 faldo:begin ?targetMotifMatchRegionMatchBeginMF_04072489 . ?targetMotifMatchRegionMatchBeginMF_04072489 faldo:position ?targetMotifMatchRegionMatchBeginPositionMF_04072482 ; faldo:reference ?thisSequence . ?targetMotifSequenceAlignmentOperationMF_04072490 edam:has_input signature:MF_04072 ; rdf:type edam:operation_0300 . ?this up:organism ?thisOrganism . ?thisOrganism rdfs:subClassOf+ taxon:197913 . BIND(STRLEN(REPLACE(SUBSTR(?templateMotifCigarP03465MF_04072479, 1, (STRLEN(?templateMotifCigarP03465MF_04072479) - STRLEN(REPLACE(?templateMotifCigarP03465MF_04072479, CONCAT('^(?:-*[^-]){', STR(((150 - ?templateMotifSequenceMatchBeginPositionP03465480) + 1)), '}'), '')))), '[a-z]', '')) AS ?step1491) . BIND((STRLEN(SUBSTR(?targetMotifMatchCigarP03465MF_04072481, 1, (STRLEN(?targetMotifMatchCigarP03465MF_04072481) - STRLEN(REPLACE(?targetMotifMatchCigarP03465MF_04072481, CONCAT('^(?:[a-z]*(?:[A-Z]|-)){', STR(?step1491), '}'), ''))))) - STRLEN(REPLACE(SUBSTR(?targetMotifMatchCigarP03465MF_04072481, 1, (STRLEN(?targetMotifMatchCigarP03465MF_04072481) - STRLEN(REPLACE(?targetMotifMatchCigarP03465MF_04072481, CONCAT('^(?:[a-z]*(?:[A-Z]|-)){', STR(?step1491), '}'), '')))), '[^-]', ''))) AS ?step2492) . BIND(((?step2492 + ?targetMotifMatchRegionMatchBeginPositionMF_04072482) - 1) AS ?thisPositionOn111) . BIND(STRLEN(REPLACE(SUBSTR(?templateMotifCigarP03465MF_04072479, 1, (STRLEN(?templateMotifCigarP03465MF_04072479) - STRLEN(REPLACE(?templateMotifCigarP03465MF_04072479, CONCAT('^(?:-*[^-]){', STR(((310 - ?templateMotifSequenceMatchBeginPositionP03465480) + 1)), '}'), '')))), '[a-z]', '')) AS ?step1493) . BIND((STRLEN(SUBSTR(?targetMotifMatchCigarP03465MF_04072481, 1, (STRLEN(?targetMotifMatchCigarP03465MF_04072481) - STRLEN(REPLACE(?targetMotifMatchCigarP03465MF_04072481, CONCAT('^(?:[a-z]*(?:[A-Z]|-)){', STR(?step1493), '}'), ''))))) - STRLEN(REPLACE(SUBSTR(?targetMotifMatchCigarP03465MF_04072481, 1, (STRLEN(?targetMotifMatchCigarP03465MF_04072481) - STRLEN(REPLACE(?targetMotifMatchCigarP03465MF_04072481, CONCAT('^(?:[a-z]*(?:[A-Z]|-)){', STR(?step1493), '}'), '')))), '[^-]', ''))) AS ?step2494) . BIND(((?step2494 + ?targetMotifMatchRegionMatchBeginPositionMF_04072482) - 1) AS ?thisPositionOn112) . BIND(?this AS ?pfs2t495) . BIND(URI(CONCAT(STR(?thisSequence), '#position', STR(?thisPositionOn111))) AS ?pfsb109) . BIND(URI(CONCAT(STR(?thisSequence), '#position', STR(?thisPositionOn112))) AS ?pfse110) . FILTER ((BOUND(?thisPositionOn111) && BOUND(?thisPositionOn112))) . BIND(URI(CONCAT(STR(?this), '#MF_04072a108')) AS ?annotation108) . BIND(?this AS ?pfs107) . } OPTIONAL { ?this up:sequence ?thisSequence . ?thisSequence rdf:value ?thisSequenceValue . ?templateMotifMatch500 faldo:location ?templateMotifSequenceMatchRegionP03465501 ; edam:is_output_of ?templateMotifSequenceProfileAlignmentOperationP03465503 ; rdf:type edam:data_0869 ; rdf:value ?templateMotifCigarP03465MF_04072496 . ?templateMotifSequenceMatchRegionP03465501 faldo:begin ?templateMotifSequenceMatchBeginP03465502 . ?templateMotifSequenceMatchBeginP03465502 faldo:position ?templateMotifSequenceMatchBeginPositionP03465497 ; faldo:reference isoform:P03465-1 . ?templateMotifSequenceProfileAlignmentOperationP03465503 edam:has_input signature:MF_04072 ; rdf:type edam:operation_0300 . ?targetMotifMatch504 faldo:location ?targetMotifMatchRegionMatch505 ; edam:is_output_of ?targetMotifSequenceAlignmentOperationMF_04072507 ; rdf:type edam:data_0869 ; rdf:value ?targetMotifMatchCigarP03465MF_04072498 . ?targetMotifMatchRegionMatch505 faldo:begin ?targetMotifMatchRegionMatchBeginMF_04072506 . ?targetMotifMatchRegionMatchBeginMF_04072506 faldo:position ?targetMotifMatchRegionMatchBeginPositionMF_04072499 ; faldo:reference ?thisSequence . ?targetMotifSequenceAlignmentOperationMF_04072507 edam:has_input signature:MF_04072 ; rdf:type edam:operation_0300 . ?this up:organism ?thisOrganism . ?thisOrganism rdfs:subClassOf+ taxon:197913 . BIND(STRLEN(REPLACE(SUBSTR(?templateMotifCigarP03465MF_04072496, 1, (STRLEN(?templateMotifCigarP03465MF_04072496) - STRLEN(REPLACE(?templateMotifCigarP03465MF_04072496, CONCAT('^(?:-*[^-]){', STR(((310 - ?templateMotifSequenceMatchBeginPositionP03465497) + 1)), '}'), '')))), '[a-z]', '')) AS ?step1508) . BIND((STRLEN(SUBSTR(?targetMotifMatchCigarP03465MF_04072498, 1, (STRLEN(?targetMotifMatchCigarP03465MF_04072498) - STRLEN(REPLACE(?targetMotifMatchCigarP03465MF_04072498, CONCAT('^(?:[a-z]*(?:[A-Z]|-)){', STR(?step1508), '}'), ''))))) - STRLEN(REPLACE(SUBSTR(?targetMotifMatchCigarP03465MF_04072498, 1, (STRLEN(?targetMotifMatchCigarP03465MF_04072498) - STRLEN(REPLACE(?targetMotifMatchCigarP03465MF_04072498, CONCAT('^(?:[a-z]*(?:[A-Z]|-)){', STR(?step1508), '}'), '')))), '[^-]', ''))) AS ?step2509) . BIND(((?step2509 + ?targetMotifMatchRegionMatchBeginPositionMF_04072499) - 1) AS ?thisPositionOn117) . BIND(STRLEN(REPLACE(SUBSTR(?templateMotifCigarP03465MF_04072496, 1, (STRLEN(?templateMotifCigarP03465MF_04072496) - STRLEN(REPLACE(?templateMotifCigarP03465MF_04072496, CONCAT('^(?:-*[^-]){', STR(((364 - ?templateMotifSequenceMatchBeginPositionP03465497) + 1)), '}'), '')))), '[a-z]', '')) AS ?step1510) . BIND((STRLEN(SUBSTR(?targetMotifMatchCigarP03465MF_04072498, 1, (STRLEN(?targetMotifMatchCigarP03465MF_04072498) - STRLEN(REPLACE(?targetMotifMatchCigarP03465MF_04072498, CONCAT('^(?:[a-z]*(?:[A-Z]|-)){', STR(?step1510), '}'), ''))))) - STRLEN(REPLACE(SUBSTR(?targetMotifMatchCigarP03465MF_04072498, 1, (STRLEN(?targetMotifMatchCigarP03465MF_04072498) - STRLEN(REPLACE(?targetMotifMatchCigarP03465MF_04072498, CONCAT('^(?:[a-z]*(?:[A-Z]|-)){', STR(?step1510), '}'), '')))), '[^-]', ''))) AS ?step2511) . BIND(((?step2511 + ?targetMotifMatchRegionMatchBeginPositionMF_04072499) - 1) AS ?thisPositionOn118) . BIND(?this AS ?pfs2t512) . BIND(URI(CONCAT(STR(?thisSequence), '#position', STR(?thisPositionOn117))) AS ?pfsb115) . BIND(URI(CONCAT(STR(?thisSequence), '#position', STR(?thisPositionOn118))) AS ?pfse116) . FILTER ((BOUND(?thisPositionOn117) && BOUND(?thisPositionOn118))) . BIND(URI(CONCAT(STR(?this), '#MF_04072a114')) AS ?annotation114) . BIND(?this AS ?pfs113) . } OPTIONAL { ?this up:sequence ?thisSequence . ?thisSequence rdf:value ?thisSequenceValue . ?templateMotifMatch517 faldo:location ?templateMotifSequenceMatchRegionP03465518 ; edam:is_output_of ?templateMotifSequenceProfileAlignmentOperationP03465520 ; rdf:type edam:data_0869 ; rdf:value ?templateMotifCigarP03465MF_04072513 . ?templateMotifSequenceMatchRegionP03465518 faldo:begin ?templateMotifSequenceMatchBeginP03465519 . ?templateMotifSequenceMatchBeginP03465519 faldo:position ?templateMotifSequenceMatchBeginPositionP03465514 ; faldo:reference isoform:P03465-1 . ?templateMotifSequenceProfileAlignmentOperationP03465520 edam:has_input signature:MF_04072 ; rdf:type edam:operation_0300 . ?targetMotifMatch521 faldo:location ?targetMotifMatchRegionMatch522 ; edam:is_output_of ?targetMotifSequenceAlignmentOperationMF_04072524 ; rdf:type edam:data_0869 ; rdf:value ?targetMotifMatchCigarP03465MF_04072515 . ?targetMotifMatchRegionMatch522 faldo:begin ?targetMotifMatchRegionMatchBeginMF_04072523 . ?targetMotifMatchRegionMatchBeginMF_04072523 faldo:position ?targetMotifMatchRegionMatchBeginPositionMF_04072516 ; faldo:reference ?thisSequence . ?targetMotifSequenceAlignmentOperationMF_04072524 edam:has_input signature:MF_04072 ; rdf:type edam:operation_0300 . ?this up:organism ?thisOrganism . ?thisOrganism rdfs:subClassOf+ taxon:197913 . BIND(STRLEN(REPLACE(SUBSTR(?templateMotifCigarP03465MF_04072513, 1, (STRLEN(?templateMotifCigarP03465MF_04072513) - STRLEN(REPLACE(?templateMotifCigarP03465MF_04072513, CONCAT('^(?:-*[^-]){', STR(((365 - ?templateMotifSequenceMatchBeginPositionP03465514) + 1)), '}'), '')))), '[a-z]', '')) AS ?step1525) . BIND((STRLEN(SUBSTR(?targetMotifMatchCigarP03465MF_04072515, 1, (STRLEN(?targetMotifMatchCigarP03465MF_04072515) - STRLEN(REPLACE(?targetMotifMatchCigarP03465MF_04072515, CONCAT('^(?:[a-z]*(?:[A-Z]|-)){', STR(?step1525), '}'), ''))))) - STRLEN(REPLACE(SUBSTR(?targetMotifMatchCigarP03465MF_04072515, 1, (STRLEN(?targetMotifMatchCigarP03465MF_04072515) - STRLEN(REPLACE(?targetMotifMatchCigarP03465MF_04072515, CONCAT('^(?:[a-z]*(?:[A-Z]|-)){', STR(?step1525), '}'), '')))), '[^-]', ''))) AS ?step2526) . BIND(((?step2526 + ?targetMotifMatchRegionMatchBeginPositionMF_04072516) - 1) AS ?thisPositionOn123) . BIND(STRLEN(REPLACE(SUBSTR(?templateMotifCigarP03465MF_04072513, 1, (STRLEN(?templateMotifCigarP03465MF_04072513) - STRLEN(REPLACE(?templateMotifCigarP03465MF_04072513, CONCAT('^(?:-*[^-]){', STR(((650 - ?templateMotifSequenceMatchBeginPositionP03465514) + 1)), '}'), '')))), '[a-z]', '')) AS ?step1527) . BIND((STRLEN(SUBSTR(?targetMotifMatchCigarP03465MF_04072515, 1, (STRLEN(?targetMotifMatchCigarP03465MF_04072515) - STRLEN(REPLACE(?targetMotifMatchCigarP03465MF_04072515, CONCAT('^(?:[a-z]*(?:[A-Z]|-)){', STR(?step1527), '}'), ''))))) - STRLEN(REPLACE(SUBSTR(?targetMotifMatchCigarP03465MF_04072515, 1, (STRLEN(?targetMotifMatchCigarP03465MF_04072515) - STRLEN(REPLACE(?targetMotifMatchCigarP03465MF_04072515, CONCAT('^(?:[a-z]*(?:[A-Z]|-)){', STR(?step1527), '}'), '')))), '[^-]', ''))) AS ?step2528) . BIND(((?step2528 + ?targetMotifMatchRegionMatchBeginPositionMF_04072516) - 1) AS ?thisPositionOn124) . BIND(?this AS ?pfs2t529) . BIND(URI(CONCAT(STR(?thisSequence), '#position', STR(?thisPositionOn123))) AS ?pfsb121) . BIND(URI(CONCAT(STR(?thisSequence), '#position', STR(?thisPositionOn124))) AS ?pfse122) . FILTER ((BOUND(?thisPositionOn123) && BOUND(?thisPositionOn124))) . BIND(URI(CONCAT(STR(?this), '#MF_04072a120')) AS ?annotation120) . BIND(?this AS ?pfs119) . } OPTIONAL { ?this up:sequence ?thisSequence . ?thisSequence rdf:value ?thisSequenceValue . ?templateMotifMatch534 faldo:location ?templateMotifSequenceMatchRegionP03465535 ; edam:is_output_of ?templateMotifSequenceProfileAlignmentOperationP03465537 ; rdf:type edam:data_0869 ; rdf:value ?templateMotifCigarP03465MF_04072530 . ?templateMotifSequenceMatchRegionP03465535 faldo:begin ?templateMotifSequenceMatchBeginP03465536 . ?templateMotifSequenceMatchBeginP03465536 faldo:position ?templateMotifSequenceMatchBeginPositionP03465531 ; faldo:reference isoform:P03465-1 . ?templateMotifSequenceProfileAlignmentOperationP03465537 edam:has_input signature:MF_04072 ; rdf:type edam:operation_0300 . ?targetMotifMatch538 faldo:location ?targetMotifMatchRegionMatch539 ; edam:is_output_of ?targetMotifSequenceAlignmentOperationMF_04072541 ; rdf:type edam:data_0869 ; rdf:value ?targetMotifMatchCigarP03465MF_04072532 . ?targetMotifMatchRegionMatch539 faldo:begin ?targetMotifMatchRegionMatchBeginMF_04072540 . ?targetMotifMatchRegionMatchBeginMF_04072540 faldo:position ?targetMotifMatchRegionMatchBeginPositionMF_04072533 ; faldo:reference ?thisSequence . ?targetMotifSequenceAlignmentOperationMF_04072541 edam:has_input signature:MF_04072 ; rdf:type edam:operation_0300 . ?this up:organism ?thisOrganism . ?thisOrganism rdfs:subClassOf+ taxon:197913 . BIND(STRLEN(REPLACE(SUBSTR(?templateMotifCigarP03465MF_04072530, 1, (STRLEN(?templateMotifCigarP03465MF_04072530) - STRLEN(REPLACE(?templateMotifCigarP03465MF_04072530, CONCAT('^(?:-*[^-]){', STR(((71 - ?templateMotifSequenceMatchBeginPositionP03465531) + 1)), '}'), '')))), '[a-z]', '')) AS ?step1542) . BIND((STRLEN(SUBSTR(?targetMotifMatchCigarP03465MF_04072532, 1, (STRLEN(?targetMotifMatchCigarP03465MF_04072532) - STRLEN(REPLACE(?targetMotifMatchCigarP03465MF_04072532, CONCAT('^(?:[a-z]*(?:[A-Z]|-)){', STR(?step1542), '}'), ''))))) - STRLEN(REPLACE(SUBSTR(?targetMotifMatchCigarP03465MF_04072532, 1, (STRLEN(?targetMotifMatchCigarP03465MF_04072532) - STRLEN(REPLACE(?targetMotifMatchCigarP03465MF_04072532, CONCAT('^(?:[a-z]*(?:[A-Z]|-)){', STR(?step1542), '}'), '')))), '[^-]', ''))) AS ?step2543) . BIND(((?step2543 + ?targetMotifMatchRegionMatchBeginPositionMF_04072533) - 1) AS ?thisPositionOn129) . BIND(?thisPositionOn129 AS ?thisPositionOn130) . BIND(?this AS ?pfs2t544) . BIND(URI(CONCAT(STR(?thisSequence), '#position', STR(?thisPositionOn129))) AS ?pfsb127) . BIND(URI(CONCAT(STR(?thisSequence), '#position', STR(?thisPositionOn130))) AS ?pfse128) . FILTER (BOUND(?thisPositionOn129)) . BIND(URI(CONCAT(STR(?this), '#MF_04072a126')) AS ?annotation126) . BIND(?this AS ?pfs125) . } OPTIONAL { ?this up:sequence ?thisSequence . ?thisSequence rdf:value ?thisSequenceValue . ?templateMotifMatch549 faldo:location ?templateMotifSequenceMatchRegionP03465550 ; edam:is_output_of ?templateMotifSequenceProfileAlignmentOperationP03465552 ; rdf:type edam:data_0869 ; rdf:value ?templateMotifCigarP03465MF_04072545 . ?templateMotifSequenceMatchRegionP03465550 faldo:begin ?templateMotifSequenceMatchBeginP03465551 . ?templateMotifSequenceMatchBeginP03465551 faldo:position ?templateMotifSequenceMatchBeginPositionP03465546 ; faldo:reference isoform:P03465-1 . ?templateMotifSequenceProfileAlignmentOperationP03465552 edam:has_input signature:MF_04072 ; rdf:type edam:operation_0300 . ?targetMotifMatch553 faldo:location ?targetMotifMatchRegionMatch554 ; edam:is_output_of ?targetMotifSequenceAlignmentOperationMF_04072556 ; rdf:type edam:data_0869 ; rdf:value ?targetMotifMatchCigarP03465MF_04072547 . ?targetMotifMatchRegionMatch554 faldo:begin ?targetMotifMatchRegionMatchBeginMF_04072555 . ?targetMotifMatchRegionMatchBeginMF_04072555 faldo:position ?targetMotifMatchRegionMatchBeginPositionMF_04072548 ; faldo:reference ?thisSequence . ?targetMotifSequenceAlignmentOperationMF_04072556 edam:has_input signature:MF_04072 ; rdf:type edam:operation_0300 . ?this up:organism ?thisOrganism . ?thisOrganism rdfs:subClassOf+ taxon:197913 . BIND(STRLEN(REPLACE(SUBSTR(?templateMotifCigarP03465MF_04072545, 1, (STRLEN(?templateMotifCigarP03465MF_04072545) - STRLEN(REPLACE(?templateMotifCigarP03465MF_04072545, CONCAT('^(?:-*[^-]){', STR(((366 - ?templateMotifSequenceMatchBeginPositionP03465546) + 1)), '}'), '')))), '[a-z]', '')) AS ?step1557) . BIND((STRLEN(SUBSTR(?targetMotifMatchCigarP03465MF_04072547, 1, (STRLEN(?targetMotifMatchCigarP03465MF_04072547) - STRLEN(REPLACE(?targetMotifMatchCigarP03465MF_04072547, CONCAT('^(?:[a-z]*(?:[A-Z]|-)){', STR(?step1557), '}'), ''))))) - STRLEN(REPLACE(SUBSTR(?targetMotifMatchCigarP03465MF_04072547, 1, (STRLEN(?targetMotifMatchCigarP03465MF_04072547) - STRLEN(REPLACE(?targetMotifMatchCigarP03465MF_04072547, CONCAT('^(?:[a-z]*(?:[A-Z]|-)){', STR(?step1557), '}'), '')))), '[^-]', ''))) AS ?step2558) . BIND(((?step2558 + ?targetMotifMatchRegionMatchBeginPositionMF_04072548) - 1) AS ?thisPositionOn135) . BIND(?thisPositionOn135 AS ?thisPositionOn136) . BIND(?this AS ?pfs2t559) . BIND(URI(CONCAT(STR(?thisSequence), '#position', STR(?thisPositionOn135))) AS ?pfsb133) . BIND(URI(CONCAT(STR(?thisSequence), '#position', STR(?thisPositionOn136))) AS ?pfse134) . FILTER (BOUND(?thisPositionOn135)) . BIND(URI(CONCAT(STR(?this), '#MF_04072a132')) AS ?annotation132) . BIND(?this AS ?pfs131) . } OPTIONAL { ?this up:sequence ?thisSequence . ?thisSequence rdf:value ?thisSequenceValue . ?templateMotifMatch564 faldo:location ?templateMotifSequenceMatchRegionP03465565 ; edam:is_output_of ?templateMotifSequenceProfileAlignmentOperationP03465567 ; rdf:type edam:data_0869 ; rdf:value ?templateMotifCigarP03465MF_04072560 . ?templateMotifSequenceMatchRegionP03465565 faldo:begin ?templateMotifSequenceMatchBeginP03465566 . ?templateMotifSequenceMatchBeginP03465566 faldo:position ?templateMotifSequenceMatchBeginPositionP03465561 ; faldo:reference isoform:P03465-1 . ?templateMotifSequenceProfileAlignmentOperationP03465567 edam:has_input signature:MF_04072 ; rdf:type edam:operation_0300 . ?targetMotifMatch568 faldo:location ?targetMotifMatchRegionMatch569 ; edam:is_output_of ?targetMotifSequenceAlignmentOperationMF_04072571 ; rdf:type edam:data_0869 ; rdf:value ?targetMotifMatchCigarP03465MF_04072562 . ?targetMotifMatchRegionMatch569 faldo:begin ?targetMotifMatchRegionMatchBeginMF_04072570 . ?targetMotifMatchRegionMatchBeginMF_04072570 faldo:position ?targetMotifMatchRegionMatchBeginPositionMF_04072563 ; faldo:reference ?thisSequence . ?targetMotifSequenceAlignmentOperationMF_04072571 edam:has_input signature:MF_04072 ; rdf:type edam:operation_0300 . ?this up:organism ?thisOrganism . ?thisOrganism rdfs:subClassOf+ taxon:197913 . BIND(STRLEN(REPLACE(SUBSTR(?templateMotifCigarP03465MF_04072560, 1, (STRLEN(?templateMotifCigarP03465MF_04072560) - STRLEN(REPLACE(?templateMotifCigarP03465MF_04072560, CONCAT('^(?:-*[^-]){', STR(((369 - ?templateMotifSequenceMatchBeginPositionP03465561) + 1)), '}'), '')))), '[a-z]', '')) AS ?step1572) . BIND((STRLEN(SUBSTR(?targetMotifMatchCigarP03465MF_04072562, 1, (STRLEN(?targetMotifMatchCigarP03465MF_04072562) - STRLEN(REPLACE(?targetMotifMatchCigarP03465MF_04072562, CONCAT('^(?:[a-z]*(?:[A-Z]|-)){', STR(?step1572), '}'), ''))))) - STRLEN(REPLACE(SUBSTR(?targetMotifMatchCigarP03465MF_04072562, 1, (STRLEN(?targetMotifMatchCigarP03465MF_04072562) - STRLEN(REPLACE(?targetMotifMatchCigarP03465MF_04072562, CONCAT('^(?:[a-z]*(?:[A-Z]|-)){', STR(?step1572), '}'), '')))), '[^-]', ''))) AS ?step2573) . BIND(((?step2573 + ?targetMotifMatchRegionMatchBeginPositionMF_04072563) - 1) AS ?thisPositionOn141) . BIND(?thisPositionOn141 AS ?thisPositionOn142) . BIND(?this AS ?pfs2t574) . BIND(URI(CONCAT(STR(?thisSequence), '#position', STR(?thisPositionOn141))) AS ?pfsb139) . BIND(URI(CONCAT(STR(?thisSequence), '#position', STR(?thisPositionOn142))) AS ?pfse140) . FILTER (BOUND(?thisPositionOn141)) . BIND(URI(CONCAT(STR(?this), '#MF_04072a138')) AS ?annotation138) . BIND(?this AS ?pfs137) . } OPTIONAL { ?this up:sequence ?thisSequence . ?thisSequence rdf:value ?thisSequenceValue . ?templateMotifMatch579 faldo:location ?templateMotifSequenceMatchRegionP03465580 ; edam:is_output_of ?templateMotifSequenceProfileAlignmentOperationP03465582 ; rdf:type edam:data_0869 ; rdf:value ?templateMotifCigarP03465MF_04072575 . ?templateMotifSequenceMatchRegionP03465580 faldo:begin ?templateMotifSequenceMatchBeginP03465581 . ?templateMotifSequenceMatchBeginP03465581 faldo:position ?templateMotifSequenceMatchBeginPositionP03465576 ; faldo:reference isoform:P03465-1 . ?templateMotifSequenceProfileAlignmentOperationP03465582 edam:has_input signature:MF_04072 ; rdf:type edam:operation_0300 . ?targetMotifMatch583 faldo:location ?targetMotifMatchRegionMatch584 ; edam:is_output_of ?targetMotifSequenceAlignmentOperationMF_04072586 ; rdf:type edam:data_0869 ; rdf:value ?targetMotifMatchCigarP03465MF_04072577 . ?targetMotifMatchRegionMatch584 faldo:begin ?targetMotifMatchRegionMatchBeginMF_04072585 . ?targetMotifMatchRegionMatchBeginMF_04072585 faldo:position ?targetMotifMatchRegionMatchBeginPositionMF_04072578 ; faldo:reference ?thisSequence . ?targetMotifSequenceAlignmentOperationMF_04072586 edam:has_input signature:MF_04072 ; rdf:type edam:operation_0300 . ?this up:organism ?thisOrganism . ?thisOrganism rdfs:subClassOf+ taxon:197913 . BIND(STRLEN(REPLACE(SUBSTR(?templateMotifCigarP03465MF_04072575, 1, (STRLEN(?templateMotifCigarP03465MF_04072575) - STRLEN(REPLACE(?templateMotifCigarP03465MF_04072575, CONCAT('^(?:-*[^-]){', STR(((20 - ?templateMotifSequenceMatchBeginPositionP03465576) + 1)), '}'), '')))), '[a-z]', '')) AS ?step1587) . BIND((STRLEN(SUBSTR(?targetMotifMatchCigarP03465MF_04072577, 1, (STRLEN(?targetMotifMatchCigarP03465MF_04072577) - STRLEN(REPLACE(?targetMotifMatchCigarP03465MF_04072577, CONCAT('^(?:[a-z]*(?:[A-Z]|-)){', STR(?step1587), '}'), ''))))) - STRLEN(REPLACE(SUBSTR(?targetMotifMatchCigarP03465MF_04072577, 1, (STRLEN(?targetMotifMatchCigarP03465MF_04072577) - STRLEN(REPLACE(?targetMotifMatchCigarP03465MF_04072577, CONCAT('^(?:[a-z]*(?:[A-Z]|-)){', STR(?step1587), '}'), '')))), '[^-]', ''))) AS ?step2588) . BIND(((?step2588 + ?targetMotifMatchRegionMatchBeginPositionMF_04072578) - 1) AS ?thisPositionOn147) . BIND(STRLEN(REPLACE(SUBSTR(?templateMotifCigarP03465MF_04072575, 1, (STRLEN(?templateMotifCigarP03465MF_04072575) - STRLEN(REPLACE(?templateMotifCigarP03465MF_04072575, CONCAT('^(?:-*[^-]){', STR(((583 - ?templateMotifSequenceMatchBeginPositionP03465576) + 1)), '}'), '')))), '[a-z]', '')) AS ?step1589) . BIND((STRLEN(SUBSTR(?targetMotifMatchCigarP03465MF_04072577, 1, (STRLEN(?targetMotifMatchCigarP03465MF_04072577) - STRLEN(REPLACE(?targetMotifMatchCigarP03465MF_04072577, CONCAT('^(?:[a-z]*(?:[A-Z]|-)){', STR(?step1589), '}'), ''))))) - STRLEN(REPLACE(SUBSTR(?targetMotifMatchCigarP03465MF_04072577, 1, (STRLEN(?targetMotifMatchCigarP03465MF_04072577) - STRLEN(REPLACE(?targetMotifMatchCigarP03465MF_04072577, CONCAT('^(?:[a-z]*(?:[A-Z]|-)){', STR(?step1589), '}'), '')))), '[^-]', ''))) AS ?step2590) . BIND(((?step2590 + ?targetMotifMatchRegionMatchBeginPositionMF_04072578) - 1) AS ?thisPositionOn148) . BIND(?this AS ?pfs2t591) . BIND(URI(CONCAT(STR(?thisSequence), '#position', STR(?thisPositionOn147))) AS ?pfsb145) . BIND(URI(CONCAT(STR(?thisSequence), '#position', STR(?thisPositionOn148))) AS ?pfse146) . FILTER (REGEX('C[ARNDCQEGHILKMFPSTWYVBZJUOX]*C', SUBSTR(?thisSequenceValue, ?thisPositionOn147, (?thisPositionOn148 - ?thisPositionOn147)))) . BIND(URI(CONCAT(STR(?this), '#MF_04072a144')) AS ?annotation144) . BIND(?this AS ?pfs143) . } OPTIONAL { ?this up:sequence ?thisSequence . ?thisSequence rdf:value ?thisSequenceValue . ?templateMotifMatch596 faldo:location ?templateMotifSequenceMatchRegionP03465597 ; edam:is_output_of ?templateMotifSequenceProfileAlignmentOperationP03465599 ; rdf:type edam:data_0869 ; rdf:value ?templateMotifCigarP03465MF_04072592 . ?templateMotifSequenceMatchRegionP03465597 faldo:begin ?templateMotifSequenceMatchBeginP03465598 . ?templateMotifSequenceMatchBeginP03465598 faldo:position ?templateMotifSequenceMatchBeginPositionP03465593 ; faldo:reference isoform:P03465-1 . ?templateMotifSequenceProfileAlignmentOperationP03465599 edam:has_input signature:MF_04072 ; rdf:type edam:operation_0300 . ?targetMotifMatch600 faldo:location ?targetMotifMatchRegionMatch601 ; edam:is_output_of ?targetMotifSequenceAlignmentOperationMF_04072603 ; rdf:type edam:data_0869 ; rdf:value ?targetMotifMatchCigarP03465MF_04072594 . ?targetMotifMatchRegionMatch601 faldo:begin ?targetMotifMatchRegionMatchBeginMF_04072602 . ?targetMotifMatchRegionMatchBeginMF_04072602 faldo:position ?targetMotifMatchRegionMatchBeginPositionMF_04072595 ; faldo:reference ?thisSequence . ?targetMotifSequenceAlignmentOperationMF_04072603 edam:has_input signature:MF_04072 ; rdf:type edam:operation_0300 . ?this up:organism ?thisOrganism . ?thisOrganism rdfs:subClassOf+ taxon:197913 . BIND(STRLEN(REPLACE(SUBSTR(?templateMotifCigarP03465MF_04072592, 1, (STRLEN(?templateMotifCigarP03465MF_04072592) - STRLEN(REPLACE(?templateMotifCigarP03465MF_04072592, CONCAT('^(?:-*[^-]){', STR(((120 - ?templateMotifSequenceMatchBeginPositionP03465593) + 1)), '}'), '')))), '[a-z]', '')) AS ?step1604) . BIND((STRLEN(SUBSTR(?targetMotifMatchCigarP03465MF_04072594, 1, (STRLEN(?targetMotifMatchCigarP03465MF_04072594) - STRLEN(REPLACE(?targetMotifMatchCigarP03465MF_04072594, CONCAT('^(?:[a-z]*(?:[A-Z]|-)){', STR(?step1604), '}'), ''))))) - STRLEN(REPLACE(SUBSTR(?targetMotifMatchCigarP03465MF_04072594, 1, (STRLEN(?targetMotifMatchCigarP03465MF_04072594) - STRLEN(REPLACE(?targetMotifMatchCigarP03465MF_04072594, CONCAT('^(?:[a-z]*(?:[A-Z]|-)){', STR(?step1604), '}'), '')))), '[^-]', ''))) AS ?step2605) . BIND(((?step2605 + ?targetMotifMatchRegionMatchBeginPositionMF_04072595) - 1) AS ?thisPositionOn153) . BIND(STRLEN(REPLACE(SUBSTR(?templateMotifCigarP03465MF_04072592, 1, (STRLEN(?templateMotifCigarP03465MF_04072592) - STRLEN(REPLACE(?templateMotifCigarP03465MF_04072592, CONCAT('^(?:-*[^-]){', STR(((165 - ?templateMotifSequenceMatchBeginPositionP03465593) + 1)), '}'), '')))), '[a-z]', '')) AS ?step1606) . BIND((STRLEN(SUBSTR(?targetMotifMatchCigarP03465MF_04072594, 1, (STRLEN(?targetMotifMatchCigarP03465MF_04072594) - STRLEN(REPLACE(?targetMotifMatchCigarP03465MF_04072594, CONCAT('^(?:[a-z]*(?:[A-Z]|-)){', STR(?step1606), '}'), ''))))) - STRLEN(REPLACE(SUBSTR(?targetMotifMatchCigarP03465MF_04072594, 1, (STRLEN(?targetMotifMatchCigarP03465MF_04072594) - STRLEN(REPLACE(?targetMotifMatchCigarP03465MF_04072594, CONCAT('^(?:[a-z]*(?:[A-Z]|-)){', STR(?step1606), '}'), '')))), '[^-]', ''))) AS ?step2607) . BIND(((?step2607 + ?targetMotifMatchRegionMatchBeginPositionMF_04072595) - 1) AS ?thisPositionOn154) . BIND(?this AS ?pfs2t608) . BIND(URI(CONCAT(STR(?thisSequence), '#position', STR(?thisPositionOn153))) AS ?pfsb151) . BIND(URI(CONCAT(STR(?thisSequence), '#position', STR(?thisPositionOn154))) AS ?pfse152) . FILTER (REGEX('C[ARNDCQEGHILKMFPSTWYVBZJUOX]*C', SUBSTR(?thisSequenceValue, ?thisPositionOn153, (?thisPositionOn154 - ?thisPositionOn153)))) . BIND(URI(CONCAT(STR(?this), '#MF_04072a150')) AS ?annotation150) . BIND(?this AS ?pfs149) . } OPTIONAL { ?this up:sequence ?thisSequence . ?thisSequence rdf:value ?thisSequenceValue . ?templateMotifMatch613 faldo:location ?templateMotifSequenceMatchRegionP03465614 ; edam:is_output_of ?templateMotifSequenceProfileAlignmentOperationP03465616 ; rdf:type edam:data_0869 ; rdf:value ?templateMotifCigarP03465MF_04072609 . ?templateMotifSequenceMatchRegionP03465614 faldo:begin ?templateMotifSequenceMatchBeginP03465615 . ?templateMotifSequenceMatchBeginP03465615 faldo:position ?templateMotifSequenceMatchBeginPositionP03465610 ; faldo:reference isoform:P03465-1 . ?templateMotifSequenceProfileAlignmentOperationP03465616 edam:has_input signature:MF_04072 ; rdf:type edam:operation_0300 . ?targetMotifMatch617 faldo:location ?targetMotifMatchRegionMatch618 ; edam:is_output_of ?targetMotifSequenceAlignmentOperationMF_04072620 ; rdf:type edam:data_0869 ; rdf:value ?targetMotifMatchCigarP03465MF_04072611 . ?targetMotifMatchRegionMatch618 faldo:begin ?targetMotifMatchRegionMatchBeginMF_04072619 . ?targetMotifMatchRegionMatchBeginMF_04072619 faldo:position ?targetMotifMatchRegionMatchBeginPositionMF_04072612 ; faldo:reference ?thisSequence . ?targetMotifSequenceAlignmentOperationMF_04072620 edam:has_input signature:MF_04072 ; rdf:type edam:operation_0300 . ?this up:organism ?thisOrganism . ?thisOrganism rdfs:subClassOf+ taxon:197913 . BIND(STRLEN(REPLACE(SUBSTR(?templateMotifCigarP03465MF_04072609, 1, (STRLEN(?templateMotifCigarP03465MF_04072609) - STRLEN(REPLACE(?templateMotifCigarP03465MF_04072609, CONCAT('^(?:-*[^-]){', STR(((140 - ?templateMotifSequenceMatchBeginPositionP03465610) + 1)), '}'), '')))), '[a-z]', '')) AS ?step1621) . BIND((STRLEN(SUBSTR(?targetMotifMatchCigarP03465MF_04072611, 1, (STRLEN(?targetMotifMatchCigarP03465MF_04072611) - STRLEN(REPLACE(?targetMotifMatchCigarP03465MF_04072611, CONCAT('^(?:[a-z]*(?:[A-Z]|-)){', STR(?step1621), '}'), ''))))) - STRLEN(REPLACE(SUBSTR(?targetMotifMatchCigarP03465MF_04072611, 1, (STRLEN(?targetMotifMatchCigarP03465MF_04072611) - STRLEN(REPLACE(?targetMotifMatchCigarP03465MF_04072611, CONCAT('^(?:[a-z]*(?:[A-Z]|-)){', STR(?step1621), '}'), '')))), '[^-]', ''))) AS ?step2622) . BIND(((?step2622 + ?targetMotifMatchRegionMatchBeginPositionMF_04072612) - 1) AS ?thisPositionOn159) . BIND(STRLEN(REPLACE(SUBSTR(?templateMotifCigarP03465MF_04072609, 1, (STRLEN(?templateMotifCigarP03465MF_04072609) - STRLEN(REPLACE(?templateMotifCigarP03465MF_04072609, CONCAT('^(?:-*[^-]){', STR(((188 - ?templateMotifSequenceMatchBeginPositionP03465610) + 1)), '}'), '')))), '[a-z]', '')) AS ?step1623) . BIND((STRLEN(SUBSTR(?targetMotifMatchCigarP03465MF_04072611, 1, (STRLEN(?targetMotifMatchCigarP03465MF_04072611) - STRLEN(REPLACE(?targetMotifMatchCigarP03465MF_04072611, CONCAT('^(?:[a-z]*(?:[A-Z]|-)){', STR(?step1623), '}'), ''))))) - STRLEN(REPLACE(SUBSTR(?targetMotifMatchCigarP03465MF_04072611, 1, (STRLEN(?targetMotifMatchCigarP03465MF_04072611) - STRLEN(REPLACE(?targetMotifMatchCigarP03465MF_04072611, CONCAT('^(?:[a-z]*(?:[A-Z]|-)){', STR(?step1623), '}'), '')))), '[^-]', ''))) AS ?step2624) . BIND(((?step2624 + ?targetMotifMatchRegionMatchBeginPositionMF_04072612) - 1) AS ?thisPositionOn160) . BIND(?this AS ?pfs2t625) . BIND(URI(CONCAT(STR(?thisSequence), '#position', STR(?thisPositionOn159))) AS ?pfsb157) . BIND(URI(CONCAT(STR(?thisSequence), '#position', STR(?thisPositionOn160))) AS ?pfse158) . FILTER (REGEX('C[ARNDCQEGHILKMFPSTWYVBZJUOX]*C', SUBSTR(?thisSequenceValue, ?thisPositionOn159, (?thisPositionOn160 - ?thisPositionOn159)))) . BIND(URI(CONCAT(STR(?this), '#MF_04072a156')) AS ?annotation156) . BIND(?this AS ?pfs155) . } OPTIONAL { ?this up:sequence ?thisSequence . ?thisSequence rdf:value ?thisSequenceValue . ?templateMotifMatch630 faldo:location ?templateMotifSequenceMatchRegionP03465631 ; edam:is_output_of ?templateMotifSequenceProfileAlignmentOperationP03465633 ; rdf:type edam:data_0869 ; rdf:value ?templateMotifCigarP03465MF_04072626 . ?templateMotifSequenceMatchRegionP03465631 faldo:begin ?templateMotifSequenceMatchBeginP03465632 . ?templateMotifSequenceMatchBeginP03465632 faldo:position ?templateMotifSequenceMatchBeginPositionP03465627 ; faldo:reference isoform:P03465-1 . ?templateMotifSequenceProfileAlignmentOperationP03465633 edam:has_input signature:MF_04072 ; rdf:type edam:operation_0300 . ?targetMotifMatch634 faldo:location ?targetMotifMatchRegionMatch635 ; edam:is_output_of ?targetMotifSequenceAlignmentOperationMF_04072637 ; rdf:type edam:data_0869 ; rdf:value ?targetMotifMatchCigarP03465MF_04072628 . ?targetMotifMatchRegionMatch635 faldo:begin ?targetMotifMatchRegionMatchBeginMF_04072636 . ?targetMotifMatchRegionMatchBeginMF_04072636 faldo:position ?targetMotifMatchRegionMatchBeginPositionMF_04072629 ; faldo:reference ?thisSequence . ?targetMotifSequenceAlignmentOperationMF_04072637 edam:has_input signature:MF_04072 ; rdf:type edam:operation_0300 . ?this up:organism ?thisOrganism . ?thisOrganism rdfs:subClassOf+ taxon:197913 . BIND(STRLEN(REPLACE(SUBSTR(?templateMotifCigarP03465MF_04072626, 1, (STRLEN(?templateMotifCigarP03465MF_04072626) - STRLEN(REPLACE(?templateMotifCigarP03465MF_04072626, CONCAT('^(?:-*[^-]){', STR(((210 - ?templateMotifSequenceMatchBeginPositionP03465627) + 1)), '}'), '')))), '[a-z]', '')) AS ?step1638) . BIND((STRLEN(SUBSTR(?targetMotifMatchCigarP03465MF_04072628, 1, (STRLEN(?targetMotifMatchCigarP03465MF_04072628) - STRLEN(REPLACE(?targetMotifMatchCigarP03465MF_04072628, CONCAT('^(?:[a-z]*(?:[A-Z]|-)){', STR(?step1638), '}'), ''))))) - STRLEN(REPLACE(SUBSTR(?targetMotifMatchCigarP03465MF_04072628, 1, (STRLEN(?targetMotifMatchCigarP03465MF_04072628) - STRLEN(REPLACE(?targetMotifMatchCigarP03465MF_04072628, CONCAT('^(?:[a-z]*(?:[A-Z]|-)){', STR(?step1638), '}'), '')))), '[^-]', ''))) AS ?step2639) . BIND(((?step2639 + ?targetMotifMatchRegionMatchBeginPositionMF_04072629) - 1) AS ?thisPositionOn165) . BIND(STRLEN(REPLACE(SUBSTR(?templateMotifCigarP03465MF_04072626, 1, (STRLEN(?templateMotifCigarP03465MF_04072626) - STRLEN(REPLACE(?templateMotifCigarP03465MF_04072626, CONCAT('^(?:-*[^-]){', STR(((252 - ?templateMotifSequenceMatchBeginPositionP03465627) + 1)), '}'), '')))), '[a-z]', '')) AS ?step1640) . BIND((STRLEN(SUBSTR(?targetMotifMatchCigarP03465MF_04072628, 1, (STRLEN(?targetMotifMatchCigarP03465MF_04072628) - STRLEN(REPLACE(?targetMotifMatchCigarP03465MF_04072628, CONCAT('^(?:[a-z]*(?:[A-Z]|-)){', STR(?step1640), '}'), ''))))) - STRLEN(REPLACE(SUBSTR(?targetMotifMatchCigarP03465MF_04072628, 1, (STRLEN(?targetMotifMatchCigarP03465MF_04072628) - STRLEN(REPLACE(?targetMotifMatchCigarP03465MF_04072628, CONCAT('^(?:[a-z]*(?:[A-Z]|-)){', STR(?step1640), '}'), '')))), '[^-]', ''))) AS ?step2641) . BIND(((?step2641 + ?targetMotifMatchRegionMatchBeginPositionMF_04072629) - 1) AS ?thisPositionOn166) . BIND(?this AS ?pfs2t642) . BIND(URI(CONCAT(STR(?thisSequence), '#position', STR(?thisPositionOn165))) AS ?pfsb163) . BIND(URI(CONCAT(STR(?thisSequence), '#position', STR(?thisPositionOn166))) AS ?pfse164) . FILTER (REGEX('C[ARNDCQEGHILKMFPSTWYVBZJUOX]*C', SUBSTR(?thisSequenceValue, ?thisPositionOn165, (?thisPositionOn166 - ?thisPositionOn165)))) . BIND(URI(CONCAT(STR(?this), '#MF_04072a162')) AS ?annotation162) . BIND(?this AS ?pfs161) . } OPTIONAL { ?this up:sequence ?thisSequence . ?thisSequence rdf:value ?thisSequenceValue . ?templateMotifMatch647 faldo:location ?templateMotifSequenceMatchRegionP03465648 ; edam:is_output_of ?templateMotifSequenceProfileAlignmentOperationP03465650 ; rdf:type edam:data_0869 ; rdf:value ?templateMotifCigarP03465MF_04072643 . ?templateMotifSequenceMatchRegionP03465648 faldo:begin ?templateMotifSequenceMatchBeginP03465649 . ?templateMotifSequenceMatchBeginP03465649 faldo:position ?templateMotifSequenceMatchBeginPositionP03465644 ; faldo:reference isoform:P03465-1 . ?templateMotifSequenceProfileAlignmentOperationP03465650 edam:has_input signature:MF_04072 ; rdf:type edam:operation_0300 . ?targetMotifMatch651 faldo:location ?targetMotifMatchRegionMatch652 ; edam:is_output_of ?targetMotifSequenceAlignmentOperationMF_04072654 ; rdf:type edam:data_0869 ; rdf:value ?targetMotifMatchCigarP03465MF_04072645 . ?targetMotifMatchRegionMatch652 faldo:begin ?targetMotifMatchRegionMatchBeginMF_04072653 . ?targetMotifMatchRegionMatchBeginMF_04072653 faldo:position ?targetMotifMatchRegionMatchBeginPositionMF_04072646 ; faldo:reference ?thisSequence . ?targetMotifSequenceAlignmentOperationMF_04072654 edam:has_input signature:MF_04072 ; rdf:type edam:operation_0300 . ?this up:organism ?thisOrganism . ?thisOrganism rdfs:subClassOf+ taxon:197913 . BIND(STRLEN(REPLACE(SUBSTR(?templateMotifCigarP03465MF_04072643, 1, (STRLEN(?templateMotifCigarP03465MF_04072643) - STRLEN(REPLACE(?templateMotifCigarP03465MF_04072643, CONCAT('^(?:-*[^-]){', STR(((229 - ?templateMotifSequenceMatchBeginPositionP03465644) + 1)), '}'), '')))), '[a-z]', '')) AS ?step1655) . BIND((STRLEN(SUBSTR(?targetMotifMatchCigarP03465MF_04072645, 1, (STRLEN(?targetMotifMatchCigarP03465MF_04072645) - STRLEN(REPLACE(?targetMotifMatchCigarP03465MF_04072645, CONCAT('^(?:[a-z]*(?:[A-Z]|-)){', STR(?step1655), '}'), ''))))) - STRLEN(REPLACE(SUBSTR(?targetMotifMatchCigarP03465MF_04072645, 1, (STRLEN(?targetMotifMatchCigarP03465MF_04072645) - STRLEN(REPLACE(?targetMotifMatchCigarP03465MF_04072645, CONCAT('^(?:[a-z]*(?:[A-Z]|-)){', STR(?step1655), '}'), '')))), '[^-]', ''))) AS ?step2656) . BIND(((?step2656 + ?targetMotifMatchRegionMatchBeginPositionMF_04072646) - 1) AS ?thisPositionOn171) . BIND(STRLEN(REPLACE(SUBSTR(?templateMotifCigarP03465MF_04072643, 1, (STRLEN(?templateMotifCigarP03465MF_04072643) - STRLEN(REPLACE(?templateMotifCigarP03465MF_04072643, CONCAT('^(?:-*[^-]){', STR(((316 - ?templateMotifSequenceMatchBeginPositionP03465644) + 1)), '}'), '')))), '[a-z]', '')) AS ?step1657) . BIND((STRLEN(SUBSTR(?targetMotifMatchCigarP03465MF_04072645, 1, (STRLEN(?targetMotifMatchCigarP03465MF_04072645) - STRLEN(REPLACE(?targetMotifMatchCigarP03465MF_04072645, CONCAT('^(?:[a-z]*(?:[A-Z]|-)){', STR(?step1657), '}'), ''))))) - STRLEN(REPLACE(SUBSTR(?targetMotifMatchCigarP03465MF_04072645, 1, (STRLEN(?targetMotifMatchCigarP03465MF_04072645) - STRLEN(REPLACE(?targetMotifMatchCigarP03465MF_04072645, CONCAT('^(?:[a-z]*(?:[A-Z]|-)){', STR(?step1657), '}'), '')))), '[^-]', ''))) AS ?step2658) . BIND(((?step2658 + ?targetMotifMatchRegionMatchBeginPositionMF_04072646) - 1) AS ?thisPositionOn172) . BIND(?this AS ?pfs2t659) . BIND(URI(CONCAT(STR(?thisSequence), '#position', STR(?thisPositionOn171))) AS ?pfsb169) . BIND(URI(CONCAT(STR(?thisSequence), '#position', STR(?thisPositionOn172))) AS ?pfse170) . FILTER (REGEX('C[ARNDCQEGHILKMFPSTWYVBZJUOX]*C', SUBSTR(?thisSequenceValue, ?thisPositionOn171, (?thisPositionOn172 - ?thisPositionOn171)))) . BIND(URI(CONCAT(STR(?this), '#MF_04072a168')) AS ?annotation168) . BIND(?this AS ?pfs167) . } OPTIONAL { ?this up:sequence ?thisSequence . ?thisSequence rdf:value ?thisSequenceValue . ?templateMotifMatch664 faldo:location ?templateMotifSequenceMatchRegionP03465665 ; edam:is_output_of ?templateMotifSequenceProfileAlignmentOperationP03465667 ; rdf:type edam:data_0869 ; rdf:value ?templateMotifCigarP03465MF_04072660 . ?templateMotifSequenceMatchRegionP03465665 faldo:begin ?templateMotifSequenceMatchBeginP03465666 . ?templateMotifSequenceMatchBeginP03465666 faldo:position ?templateMotifSequenceMatchBeginPositionP03465661 ; faldo:reference isoform:P03465-1 . ?templateMotifSequenceProfileAlignmentOperationP03465667 edam:has_input signature:MF_04072 ; rdf:type edam:operation_0300 . ?targetMotifMatch668 faldo:location ?targetMotifMatchRegionMatch669 ; edam:is_output_of ?targetMotifSequenceAlignmentOperationMF_04072671 ; rdf:type edam:data_0869 ; rdf:value ?targetMotifMatchCigarP03465MF_04072662 . ?targetMotifMatchRegionMatch669 faldo:begin ?targetMotifMatchRegionMatchBeginMF_04072670 . ?targetMotifMatchRegionMatchBeginMF_04072670 faldo:position ?targetMotifMatchRegionMatchBeginPositionMF_04072663 ; faldo:reference ?thisSequence . ?targetMotifSequenceAlignmentOperationMF_04072671 edam:has_input signature:MF_04072 ; rdf:type edam:operation_0300 . ?this up:organism ?thisOrganism . ?thisOrganism rdfs:subClassOf+ taxon:197913 . BIND(STRLEN(REPLACE(SUBSTR(?templateMotifCigarP03465MF_04072660, 1, (STRLEN(?templateMotifCigarP03465MF_04072660) - STRLEN(REPLACE(?templateMotifCigarP03465MF_04072660, CONCAT('^(?:-*[^-]){', STR(((237 - ?templateMotifSequenceMatchBeginPositionP03465661) + 1)), '}'), '')))), '[a-z]', '')) AS ?step1672) . BIND((STRLEN(SUBSTR(?targetMotifMatchCigarP03465MF_04072662, 1, (STRLEN(?targetMotifMatchCigarP03465MF_04072662) - STRLEN(REPLACE(?targetMotifMatchCigarP03465MF_04072662, CONCAT('^(?:[a-z]*(?:[A-Z]|-)){', STR(?step1672), '}'), ''))))) - STRLEN(REPLACE(SUBSTR(?targetMotifMatchCigarP03465MF_04072662, 1, (STRLEN(?targetMotifMatchCigarP03465MF_04072662) - STRLEN(REPLACE(?targetMotifMatchCigarP03465MF_04072662, CONCAT('^(?:[a-z]*(?:[A-Z]|-)){', STR(?step1672), '}'), '')))), '[^-]', ''))) AS ?step2673) . BIND(((?step2673 + ?targetMotifMatchRegionMatchBeginPositionMF_04072663) - 1) AS ?thisPositionOn177) . BIND(STRLEN(REPLACE(SUBSTR(?templateMotifCigarP03465MF_04072660, 1, (STRLEN(?templateMotifCigarP03465MF_04072660) - STRLEN(REPLACE(?templateMotifCigarP03465MF_04072660, CONCAT('^(?:-*[^-]){', STR(((289 - ?templateMotifSequenceMatchBeginPositionP03465661) + 1)), '}'), '')))), '[a-z]', '')) AS ?step1674) . BIND((STRLEN(SUBSTR(?targetMotifMatchCigarP03465MF_04072662, 1, (STRLEN(?targetMotifMatchCigarP03465MF_04072662) - STRLEN(REPLACE(?targetMotifMatchCigarP03465MF_04072662, CONCAT('^(?:[a-z]*(?:[A-Z]|-)){', STR(?step1674), '}'), ''))))) - STRLEN(REPLACE(SUBSTR(?targetMotifMatchCigarP03465MF_04072662, 1, (STRLEN(?targetMotifMatchCigarP03465MF_04072662) - STRLEN(REPLACE(?targetMotifMatchCigarP03465MF_04072662, CONCAT('^(?:[a-z]*(?:[A-Z]|-)){', STR(?step1674), '}'), '')))), '[^-]', ''))) AS ?step2675) . BIND(((?step2675 + ?targetMotifMatchRegionMatchBeginPositionMF_04072663) - 1) AS ?thisPositionOn178) . BIND(?this AS ?pfs2t676) . BIND(URI(CONCAT(STR(?thisSequence), '#position', STR(?thisPositionOn177))) AS ?pfsb175) . BIND(URI(CONCAT(STR(?thisSequence), '#position', STR(?thisPositionOn178))) AS ?pfse176) . FILTER (REGEX('C[ARNDCQEGHILKMFPSTWYVBZJUOX]*C', SUBSTR(?thisSequenceValue, ?thisPositionOn177, (?thisPositionOn178 - ?thisPositionOn177)))) . BIND(URI(CONCAT(STR(?this), '#MF_04072a174')) AS ?annotation174) . BIND(?this AS ?pfs173) . } OPTIONAL { ?this up:sequence ?thisSequence . ?thisSequence rdf:value ?thisSequenceValue . ?templateMotifMatch681 faldo:location ?templateMotifSequenceMatchRegionP03465682 ; edam:is_output_of ?templateMotifSequenceProfileAlignmentOperationP03465684 ; rdf:type edam:data_0869 ; rdf:value ?templateMotifCigarP03465MF_04072677 . ?templateMotifSequenceMatchRegionP03465682 faldo:begin ?templateMotifSequenceMatchBeginP03465683 . ?templateMotifSequenceMatchBeginP03465683 faldo:position ?templateMotifSequenceMatchBeginPositionP03465678 ; faldo:reference isoform:P03465-1 . ?templateMotifSequenceProfileAlignmentOperationP03465684 edam:has_input signature:MF_04072 ; rdf:type edam:operation_0300 . ?targetMotifMatch685 faldo:location ?targetMotifMatchRegionMatch686 ; edam:is_output_of ?targetMotifSequenceAlignmentOperationMF_04072688 ; rdf:type edam:data_0869 ; rdf:value ?targetMotifMatchCigarP03465MF_04072679 . ?targetMotifMatchRegionMatch686 faldo:begin ?targetMotifMatchRegionMatchBeginMF_04072687 . ?targetMotifMatchRegionMatchBeginMF_04072687 faldo:position ?targetMotifMatchRegionMatchBeginPositionMF_04072680 ; faldo:reference ?thisSequence . ?targetMotifSequenceAlignmentOperationMF_04072688 edam:has_input signature:MF_04072 ; rdf:type edam:operation_0300 . ?this up:organism ?thisOrganism . ?thisOrganism rdfs:subClassOf+ taxon:197913 . BIND(STRLEN(REPLACE(SUBSTR(?templateMotifCigarP03465MF_04072677, 1, (STRLEN(?templateMotifCigarP03465MF_04072677) - STRLEN(REPLACE(?templateMotifCigarP03465MF_04072677, CONCAT('^(?:-*[^-]){', STR(((345 - ?templateMotifSequenceMatchBeginPositionP03465678) + 1)), '}'), '')))), '[a-z]', '')) AS ?step1689) . BIND((STRLEN(SUBSTR(?targetMotifMatchCigarP03465MF_04072679, 1, (STRLEN(?targetMotifMatchCigarP03465MF_04072679) - STRLEN(REPLACE(?targetMotifMatchCigarP03465MF_04072679, CONCAT('^(?:[a-z]*(?:[A-Z]|-)){', STR(?step1689), '}'), ''))))) - STRLEN(REPLACE(SUBSTR(?targetMotifMatchCigarP03465MF_04072679, 1, (STRLEN(?targetMotifMatchCigarP03465MF_04072679) - STRLEN(REPLACE(?targetMotifMatchCigarP03465MF_04072679, CONCAT('^(?:[a-z]*(?:[A-Z]|-)){', STR(?step1689), '}'), '')))), '[^-]', ''))) AS ?step2690) . BIND(((?step2690 + ?targetMotifMatchRegionMatchBeginPositionMF_04072680) - 1) AS ?thisPositionOn183) . BIND(STRLEN(REPLACE(SUBSTR(?templateMotifCigarP03465MF_04072677, 1, (STRLEN(?templateMotifCigarP03465MF_04072677) - STRLEN(REPLACE(?templateMotifCigarP03465MF_04072677, CONCAT('^(?:-*[^-]){', STR(((351 - ?templateMotifSequenceMatchBeginPositionP03465678) + 1)), '}'), '')))), '[a-z]', '')) AS ?step1691) . BIND((STRLEN(SUBSTR(?targetMotifMatchCigarP03465MF_04072679, 1, (STRLEN(?targetMotifMatchCigarP03465MF_04072679) - STRLEN(REPLACE(?targetMotifMatchCigarP03465MF_04072679, CONCAT('^(?:[a-z]*(?:[A-Z]|-)){', STR(?step1691), '}'), ''))))) - STRLEN(REPLACE(SUBSTR(?targetMotifMatchCigarP03465MF_04072679, 1, (STRLEN(?targetMotifMatchCigarP03465MF_04072679) - STRLEN(REPLACE(?targetMotifMatchCigarP03465MF_04072679, CONCAT('^(?:[a-z]*(?:[A-Z]|-)){', STR(?step1691), '}'), '')))), '[^-]', ''))) AS ?step2692) . BIND(((?step2692 + ?targetMotifMatchRegionMatchBeginPositionMF_04072680) - 1) AS ?thisPositionOn184) . BIND(?this AS ?pfs2t693) . BIND(URI(CONCAT(STR(?thisSequence), '#position', STR(?thisPositionOn183))) AS ?pfsb181) . BIND(URI(CONCAT(STR(?thisSequence), '#position', STR(?thisPositionOn184))) AS ?pfse182) . FILTER (REGEX('C[ARNDCQEGHILKMFPSTWYVBZJUOX]*C', SUBSTR(?thisSequenceValue, ?thisPositionOn183, (?thisPositionOn184 - ?thisPositionOn183)))) . BIND(URI(CONCAT(STR(?this), '#MF_04072a180')) AS ?annotation180) . BIND(?this AS ?pfs179) . } OPTIONAL { ?this a up:Protein . ?this up:organism ?thisOrganism . ?thisOrganism rdfs:subClassOf+ taxon:197912 . BIND(?this AS ?case5) . } OPTIONAL { ?this a up:Protein . ?this up:organism ?thisOrganism . ?thisOrganism rdfs:subClassOf+ taxon:197911 . BIND(?this AS ?case6) . } OPTIONAL { ?this a up:Protein . ?this up:organism ?thisOrganism . ?thisOrganism rdfs:subClassOf+ taxon:197913 . BIND(?this AS ?case7) . } OPTIONAL { ?this a up:Protein . VALUES ?supertaxon694 {taxon:197911 taxon:197912} ?this up:organism ?thisOrganism . ?thisOrganism rdfs:subClassOf+ ?supertaxon694 . BIND(?this AS ?case8) . } OPTIONAL { ?this a up:Protein . ?this up:organism ?thisOrganism . FILTER (! (EXISTS { VALUES ?supertaxon695 {taxon:197911 taxon:197912} ?thisOrganism rdfs:subClassOf+ ?supertaxon695 . })) . BIND(?this AS ?case9) . BIND(URI(CONCAT(STR(?this), '#MF_04072a10')) AS ?name10) . } OPTIONAL { ?this up:annotation ?samtransmembrane696 ; up:sequence ?thisSequence . ?samtransmembrane696 up:range ?samtransmembraner697 ; rdf:type up:Transmembrane_Annotation . ?samtransmembraner697 faldo:begin ?samtransmembraneb698 ; faldo:end ?samtransmembranee699 . ?samtransmembraneb698 faldo:position ?samtransmembranebp700 ; faldo:reference ?thisSequence . ?samtransmembranee699 faldo:position ?samtransmembraneep701 ; faldo:reference ?thisSequence . BIND(?this AS ?sam185) . } BIND(URI(CONCAT(STR(?this), '#MF_04072a191')) AS ?keyword191) . BIND(URI(CONCAT(STR(?this), '#MF_04072a192')) AS ?keyword192) . BIND(URI(CONCAT(STR(?this), '#MF_04072a193')) AS ?keyword193) . OPTIONAL { ?this up:annotation ?samsignal702 ; up:sequence ?thisSequence . ?samsignal702 up:range ?samsignalr703 ; rdf:type up:Signal_Peptide_Annotation . ?samsignalr703 faldo:begin ?samsignalb704 ; faldo:end ?samsignale705 . ?samsignalb704 faldo:position ?samsignalbp706 ; faldo:reference ?thisSequence . ?samsignale705 faldo:position ?samsignalep707 ; faldo:reference ?thisSequence . BIND(?this AS ?sam194) . } BIND(URI(CONCAT(STR(?this), '#MF_04072a200')) AS ?keyword200) . }