CONSTRUCT { _:5047 up:source unirule:MF_00012 . _:5048 up:source unirule:MF_00012 . _:5049 up:source unirule:MF_00012 . _:5050 up:source unirule:MF_00012 . _:5051 up:source unirule:MF_00012 . _:5052 up:source unirule:MF_00012 . _:5053 up:source unirule:MF_00012 . _:5054 up:source unirule:MF_00012 . _:5055 up:source unirule:MF_00012 . _:5056 up:source unirule:MF_00012 . _:5057 up:source unirule:MF_00012 . _:5058 up:source unirule:MF_00012 . _:5059 up:source unirule:MF_00012 . _:5060 up:source unirule:MF_00012 . _:5061 up:source unirule:MF_00012 . _:5062 up:source unirule:MF_00012 . _:5063 up:source unirule:MF_00012 . _:5064 up:source unirule:MF_00012 . _:5065 up:source unirule:MF_00012 . _:5066 up:source unirule:MF_00012 . _:5067 up:source unirule:MF_00012 . _:5068 up:source unirule:MF_00012 . _:5069 up:source unirule:MF_00012 . _:5070 up:source unirule:MF_00012 . _:5071 up:source unirule:MF_00012 . _:5072 up:source unirule:MF_00012 . _:5073 up:source unirule:MF_00012 . _:5074 up:source unirule:MF_00012 . _:5075 up:source unirule:MF_00012 . _:5076 up:source unirule:MF_00012 . _:5077 up:source unirule:MF_00012 . _:5078 up:source unirule:MF_00012 . _:5079 up:source unirule:MF_00012 . ?this up:annotation ?annotation2 , ?annotation3 , ?annotation5 , ?annotation7 , ?annotation8 , ?annotation9 , ?annotation10 , ?annotation11 , ?annotation12 ; up:classifiedWith GO:0000287 , GO:0004160 , GO:0009097 , GO:0009099 , GO:0051537 , keyword:100 , keyword:1 , keyword:28 , keyword:408 , keyword:411 , keyword:456 , keyword:460 , keyword:479 ; up:recommendedName ?name0 . ?name0 up:ecName '4.2.1.9' ; up:fullName 'Dihydroxy-acid dehydratase' ; up:shortName 'DAD' ; rdf:type up:Structured_Name . ?gene1 skos:prefLabel 'ilvD' . ?annotation2 a up:Function_Annotation ; rdfs:comment 'Functions in the biosynthesis of branched-chain amino acids. Catalyzes the dehydration of (2R,3R)-2,3-dihydroxy-3-methylpentanoate (2,3-dihydroxy-3-methylvalerate) into 2-oxo-3-methylpentanoate (2-oxo-3-methylvalerate) and of (2R)-2,3-dihydroxy-3-methylbutanoate (2,3-dihydroxyisovalerate) into 2-oxo-3-methylbutanoate (2-oxoisovalerate), the penultimate precursor to L-isoleucine and L-valine, respectively.' . ?annotation3 up:activity ?activity4 ; rdf:type up:Catalytic_Activity_Annotation . ?activity4 up:catalyticActivity <http://rdf.rhea-db.org/24809>; up:enzymeClass <http://purl.uniprot.org/enzyme/4.2.1.9>. ?annotation5 up:activity ?activity6 ; rdf:type up:Catalytic_Activity_Annotation . ?activity6 up:catalyticActivity <http://rdf.rhea-db.org/27694>; up:enzymeClass <http://purl.uniprot.org/enzyme/4.2.1.9>. ?annotation7 up:cofactor chebi:190135 ; rdf:type up:Cofactor_Annotation ; rdfs:comment 'Binds 1 [2Fe-2S] cluster per subunit. This cluster acts as a Lewis acid cofactor.' . ?annotation8 up:cofactor chebi:18420 ; rdf:type up:Cofactor_Annotation . ?annotation9 a up:Pathway_Annotation ; rdfs:comment 'Amino-acid biosynthesis; L-isoleucine biosynthesis; L-isoleucine from 2-oxobutanoate: step 3/4.' . ?annotation10 a up:Pathway_Annotation ; rdfs:comment 'Amino-acid biosynthesis; L-valine biosynthesis; L-valine from pyruvate: step 3/4.' . ?annotation11 a up:Subunit_Annotation ; rdfs:comment 'Homodimer.' . ?annotation12 a up:Similarity_Annotation ; rdfs:comment 'Belongs to the IlvD/Edd family.' . ?pfs13 up:annotation ?annotation14 . ?annotation14 faldo:begin ?pfsb15 ; faldo:end ?pfse16 ; rdf:type up:Active_Site_Annotation ; rdfs:comment 'Proton acceptor' . ?pfsb15 faldo:position ?thisPositionOn17 ; rdf:type faldo:ExactPosition . ?pfse16 faldo:position ?thisPositionOn18 ; rdf:type faldo:ExactPosition . ?pfs19 up:annotation ?annotation20 . ?annotation20 faldo:begin ?pfsb21 ; faldo:end ?pfse22 ; up:ligand ?ligand23 ; rdf:type up:Binding_Site_Annotation . ?pfsb21 faldo:position ?thisPositionOn24 ; rdf:type faldo:ExactPosition . ?pfse22 faldo:position ?thisPositionOn25 ; rdf:type faldo:ExactPosition . ?ligand23 rdfs:subClassOf chebi:190135 . ?pfs26 up:annotation ?annotation27 . ?annotation27 faldo:begin ?pfsb28 ; faldo:end ?pfse29 ; up:ligand ?ligand30 ; rdf:type up:Binding_Site_Annotation . ?pfsb28 faldo:position ?thisPositionOn31 ; rdf:type faldo:ExactPosition . ?pfse29 faldo:position ?thisPositionOn32 ; rdf:type faldo:ExactPosition . ?ligand30 rdfs:subClassOf chebi:18420 . ?pfs33 up:annotation ?annotation34 . ?annotation34 faldo:begin ?pfsb35 ; faldo:end ?pfse36 ; up:ligand ?ligand37 ; rdf:type up:Binding_Site_Annotation . ?pfsb35 faldo:position ?thisPositionOn38 ; rdf:type faldo:ExactPosition . ?pfse36 faldo:position ?thisPositionOn39 ; rdf:type faldo:ExactPosition . ?ligand37 rdfs:subClassOf chebi:190135 . ?pfs40 up:annotation ?annotation41 . ?annotation41 faldo:begin ?pfsb42 ; faldo:end ?pfse43 ; up:ligand ?ligand44 ; rdf:type up:Binding_Site_Annotation . ?pfsb42 faldo:position ?thisPositionOn45 ; rdf:type faldo:ExactPosition . ?pfse43 faldo:position ?thisPositionOn46 ; rdf:type faldo:ExactPosition . ?ligand44 rdfs:subClassOf chebi:18420 . ?pfs47 up:annotation ?annotation48 . ?annotation48 faldo:begin ?pfsb49 ; faldo:end ?pfse50 ; up:ligand ?ligand51 ; rdf:type up:Binding_Site_Annotation ; rdfs:comment 'via carbamate group' . ?pfsb49 faldo:position ?thisPositionOn52 ; rdf:type faldo:ExactPosition . ?pfse50 faldo:position ?thisPositionOn53 ; rdf:type faldo:ExactPosition . ?ligand51 rdfs:subClassOf chebi:18420 . ?pfs54 up:annotation ?annotation55 . ?annotation55 faldo:begin ?pfsb56 ; faldo:end ?pfse57 ; up:ligand ?ligand58 ; rdf:type up:Binding_Site_Annotation . ?pfsb56 faldo:position ?thisPositionOn59 ; rdf:type faldo:ExactPosition . ?pfse57 faldo:position ?thisPositionOn60 ; rdf:type faldo:ExactPosition . ?ligand58 rdfs:subClassOf chebi:190135 . ?pfs61 up:annotation ?annotation62 . ?annotation62 faldo:begin ?pfsb63 ; faldo:end ?pfse64 ; up:ligand ?ligand65 ; rdf:type up:Binding_Site_Annotation . ?pfsb63 faldo:position ?thisPositionOn66 ; rdf:type faldo:ExactPosition . ?pfse64 faldo:position ?thisPositionOn67 ; rdf:type faldo:ExactPosition . ?ligand65 rdfs:subClassOf chebi:18420 . ?pfs68 up:annotation ?annotation69 . ?annotation69 faldo:begin ?pfsb70 ; faldo:end ?pfse71 ; rdf:type up:Modified_Residue_Annotation ; rdfs:comment 'N6-carboxylysine' . ?pfsb70 faldo:position ?thisPositionOn72 ; rdf:type faldo:ExactPosition . ?pfse71 faldo:position ?thisPositionOn73 ; rdf:type faldo:ExactPosition . _:5080 a rdf:Statement ; up:attribution _:5047 ; rdf:subject ?this ; rdf:predicate up:recommendedName ; rdf:object ?name0 . _:5081 a rdf:Statement ; up:attribution _:5048 ; rdf:subject ?gene1 ; rdf:predicate up:encodedBy ; rdf:object ?gene1 . _:5082 a rdf:Statement ; up:attribution _:5049 ; rdf:subject ?this ; rdf:predicate up:annotation ; rdf:object ?annotation2 . _:5083 a rdf:Statement ; up:attribution _:5050 ; rdf:subject ?this ; rdf:predicate up:annotation ; rdf:object ?annotation3 . _:5084 a rdf:Statement ; up:attribution _:5051 ; rdf:subject ?this ; rdf:predicate up:annotation ; rdf:object ?annotation5 . _:5085 a rdf:Statement ; up:attribution _:5052 ; rdf:subject ?this ; rdf:predicate up:annotation ; rdf:object ?annotation7 . _:5086 a rdf:Statement ; up:attribution _:5053 ; rdf:subject ?this ; rdf:predicate up:annotation ; rdf:object ?annotation8 . _:5087 a rdf:Statement ; up:attribution _:5054 ; rdf:subject ?this ; rdf:predicate up:annotation ; rdf:object ?annotation9 . _:5088 a rdf:Statement ; up:attribution _:5055 ; rdf:subject ?this ; rdf:predicate up:annotation ; rdf:object ?annotation10 . _:5089 a rdf:Statement ; up:attribution _:5056 ; rdf:subject ?this ; rdf:predicate up:annotation ; rdf:object ?annotation11 . _:5090 a rdf:Statement ; up:attribution _:5057 ; rdf:subject ?this ; rdf:predicate up:annotation ; rdf:object ?annotation12 . _:5091 a rdf:Statement ; up:attribution _:5058 ; rdf:subject ?this ; rdf:predicate up:classifiedWith ; rdf:object keyword:28 . _:5092 a rdf:Statement ; up:attribution _:5059 ; rdf:subject ?this ; rdf:predicate up:classifiedWith ; rdf:object keyword:100 . _:5093 a rdf:Statement ; up:attribution _:5060 ; rdf:subject ?this ; rdf:predicate up:classifiedWith ; rdf:object keyword:456 . _:5094 a rdf:Statement ; up:attribution _:5061 ; rdf:subject ?this ; rdf:predicate up:classifiedWith ; rdf:object keyword:479 . _:5095 a rdf:Statement ; up:attribution _:5062 ; rdf:subject ?this ; rdf:predicate up:classifiedWith ; rdf:object keyword:408 . _:5096 a rdf:Statement ; up:attribution _:5063 ; rdf:subject ?this ; rdf:predicate up:classifiedWith ; rdf:object keyword:411 . _:5097 a rdf:Statement ; up:attribution _:5064 ; rdf:subject ?this ; rdf:predicate up:classifiedWith ; rdf:object keyword:1 . _:5098 a rdf:Statement ; up:attribution _:5065 ; rdf:subject ?this ; rdf:predicate up:classifiedWith ; rdf:object keyword:460 . _:5099 a rdf:Statement ; up:attribution _:5066 ; rdf:subject ?this ; rdf:predicate up:classifiedWith ; rdf:object GO:0000287 . _:5100 a rdf:Statement ; up:attribution _:5067 ; rdf:subject ?this ; rdf:predicate up:classifiedWith ; rdf:object GO:0004160 . _:5101 a rdf:Statement ; up:attribution _:5068 ; rdf:subject ?this ; rdf:predicate up:classifiedWith ; rdf:object GO:0051537 . _:5102 a rdf:Statement ; up:attribution _:5069 ; rdf:subject ?this ; rdf:predicate up:classifiedWith ; rdf:object GO:0009097 . _:5103 a rdf:Statement ; up:attribution _:5070 ; rdf:subject ?this ; rdf:predicate up:classifiedWith ; rdf:object GO:0009099 . _:5104 a rdf:Statement ; up:source unirule:MF_00012 ; rdf:subject ?pfs13 ; rdf:predicate up:annotation ; rdf:object ?annotation14 . _:5105 a rdf:Statement ; up:attribution _:5071 ; rdf:subject ?pfs13 ; rdf:predicate up:annotation ; rdf:object ?annotation14 . _:5106 a rdf:Statement ; up:source unirule:MF_00012 ; rdf:subject ?pfs19 ; rdf:predicate up:annotation ; rdf:object ?annotation20 . _:5107 a rdf:Statement ; up:attribution _:5072 ; rdf:subject ?pfs19 ; rdf:predicate up:annotation ; rdf:object ?annotation20 . _:5108 a rdf:Statement ; up:source unirule:MF_00012 ; rdf:subject ?pfs26 ; rdf:predicate up:annotation ; rdf:object ?annotation27 . _:5109 a rdf:Statement ; up:attribution _:5073 ; rdf:subject ?pfs26 ; rdf:predicate up:annotation ; rdf:object ?annotation27 . _:5110 a rdf:Statement ; up:source unirule:MF_00012 ; rdf:subject ?pfs33 ; rdf:predicate up:annotation ; rdf:object ?annotation34 . _:5111 a rdf:Statement ; up:attribution _:5074 ; rdf:subject ?pfs33 ; rdf:predicate up:annotation ; rdf:object ?annotation34 . _:5112 a rdf:Statement ; up:source unirule:MF_00012 ; rdf:subject ?pfs40 ; rdf:predicate up:annotation ; rdf:object ?annotation41 . _:5113 a rdf:Statement ; up:attribution _:5075 ; rdf:subject ?pfs40 ; rdf:predicate up:annotation ; rdf:object ?annotation41 . _:5114 a rdf:Statement ; up:source unirule:MF_00012 ; rdf:subject ?pfs47 ; rdf:predicate up:annotation ; rdf:object ?annotation48 . _:5115 a rdf:Statement ; up:attribution _:5076 ; rdf:subject ?pfs47 ; rdf:predicate up:annotation ; rdf:object ?annotation48 . _:5116 a rdf:Statement ; up:source unirule:MF_00012 ; rdf:subject ?pfs54 ; rdf:predicate up:annotation ; rdf:object ?annotation55 . _:5117 a rdf:Statement ; up:attribution _:5077 ; rdf:subject ?pfs54 ; rdf:predicate up:annotation ; rdf:object ?annotation55 . _:5118 a rdf:Statement ; up:source unirule:MF_00012 ; rdf:subject ?pfs61 ; rdf:predicate up:annotation ; rdf:object ?annotation62 . _:5119 a rdf:Statement ; up:attribution _:5078 ; rdf:subject ?pfs61 ; rdf:predicate up:annotation ; rdf:object ?annotation62 . _:5120 a rdf:Statement ; up:source unirule:MF_00012 ; rdf:subject ?pfs68 ; rdf:predicate up:annotation ; rdf:object ?annotation69 . _:5121 a rdf:Statement ; up:attribution _:5079 ; rdf:subject ?pfs68 ; rdf:predicate up:annotation ; rdf:object ?annotation69 . } WHERE { #baseURI: http://purl.uniprot.org/unirule/MF_00012 #Rule MF_00012 Created by:hamap on:2001-06-01 Modified by:ecastro on:2023-06-01 VALUES ?supertaxon74 {taxon:2 taxon:2157} ?this up:organism ?thisOrganism ; rdfs:seeAlso signature:MF_00012 . ?thisOrganism rdfs:subClassOf+ ?supertaxon74 . BIND(URI(CONCAT(STR(?this), '#MF_00012a0')) AS ?name0) . BIND(URI(CONCAT(STR(?this), '#MF_00012a2')) AS ?annotation2) . BIND(URI(CONCAT(STR(?this), '#MF_00012a3')) AS ?annotation3) . BIND(URI(CONCAT(STR(?this), '#MF_00012a5')) AS ?annotation5) . BIND(URI(CONCAT(STR(?this), '#MF_00012a7')) AS ?annotation7) . BIND(URI(CONCAT(STR(?this), '#MF_00012a8')) AS ?annotation8) . BIND(URI(CONCAT(STR(?this), '#MF_00012a9')) AS ?annotation9) . BIND(URI(CONCAT(STR(?this), '#MF_00012a10')) AS ?annotation10) . BIND(URI(CONCAT(STR(?this), '#MF_00012a11')) AS ?annotation11) . BIND(URI(CONCAT(STR(?this), '#MF_00012a12')) AS ?annotation12) . OPTIONAL { ?this up:sequence ?thisSequence . ?thisSequence rdf:value ?thisSequenceValue . ?templateMotifMatch79 faldo:location ?templateMotifSequenceMatchRegionP9WKJ580 ; edam:is_output_of ?templateMotifSequenceProfileAlignmentOperationP9WKJ582 ; rdf:type edam:data_0869 ; rdf:value ?templateMotifCigarP9WKJ5MF_0001275 . ?templateMotifSequenceMatchRegionP9WKJ580 faldo:begin ?templateMotifSequenceMatchBeginP9WKJ581 . ?templateMotifSequenceMatchBeginP9WKJ581 faldo:position ?templateMotifSequenceMatchBeginPositionP9WKJ576 ; faldo:reference isoform:P9WKJ5-1 . ?templateMotifSequenceProfileAlignmentOperationP9WKJ582 edam:has_input signature:MF_00012 ; rdf:type edam:operation_0300 . ?targetMotifMatch83 faldo:location ?targetMotifMatchRegionMatch84 ; edam:is_output_of ?targetMotifSequenceAlignmentOperationMF_0001286 ; rdf:type edam:data_0869 ; rdf:value ?targetMotifMatchCigarP9WKJ5MF_0001277 . ?targetMotifMatchRegionMatch84 faldo:begin ?targetMotifMatchRegionMatchBeginMF_0001285 . ?targetMotifMatchRegionMatchBeginMF_0001285 faldo:position ?targetMotifMatchRegionMatchBeginPositionMF_0001278 ; faldo:reference ?thisSequence . ?targetMotifSequenceAlignmentOperationMF_0001286 edam:has_input signature:MF_00012 ; rdf:type edam:operation_0300 . BIND(STRLEN(REPLACE(SUBSTR(?templateMotifCigarP9WKJ5MF_0001275, 1, (STRLEN(?templateMotifCigarP9WKJ5MF_0001275) - STRLEN(REPLACE(?templateMotifCigarP9WKJ5MF_0001275, CONCAT('^(?:-*[^-]){', STR(((491 - ?templateMotifSequenceMatchBeginPositionP9WKJ576) + 1)), '}'), '')))), '[a-z]', '')) AS ?step187) . BIND((STRLEN(SUBSTR(?targetMotifMatchCigarP9WKJ5MF_0001277, 1, (STRLEN(?targetMotifMatchCigarP9WKJ5MF_0001277) - STRLEN(REPLACE(?targetMotifMatchCigarP9WKJ5MF_0001277, CONCAT('^(?:[a-z]*(?:[A-Z]|-)){', STR(?step187), '}'), ''))))) - STRLEN(REPLACE(SUBSTR(?targetMotifMatchCigarP9WKJ5MF_0001277, 1, (STRLEN(?targetMotifMatchCigarP9WKJ5MF_0001277) - STRLEN(REPLACE(?targetMotifMatchCigarP9WKJ5MF_0001277, CONCAT('^(?:[a-z]*(?:[A-Z]|-)){', STR(?step187), '}'), '')))), '[^-]', ''))) AS ?step288) . BIND(((?step288 + ?targetMotifMatchRegionMatchBeginPositionMF_0001278) - 1) AS ?thisPositionOn17) . BIND(?thisPositionOn17 AS ?thisPositionOn18) . BIND(?this AS ?pfs1t89) . BIND(URI(CONCAT(STR(?thisSequence), '#position', STR(?thisPositionOn17))) AS ?pfsb15) . BIND(URI(CONCAT(STR(?thisSequence), '#position', STR(?thisPositionOn18))) AS ?pfse16) . FILTER ((SUBSTR(?thisSequenceValue, ?thisPositionOn17, 1) = 'S')) . BIND(URI(CONCAT(STR(?this), '#MF_00012a14')) AS ?annotation14) . BIND(?this AS ?pfs13) . } OPTIONAL { ?this up:sequence ?thisSequence . ?thisSequence rdf:value ?thisSequenceValue . ?templateMotifMatch94 faldo:location ?templateMotifSequenceMatchRegionP9WKJ595 ; edam:is_output_of ?templateMotifSequenceProfileAlignmentOperationP9WKJ597 ; rdf:type edam:data_0869 ; rdf:value ?templateMotifCigarP9WKJ5MF_0001290 . ?templateMotifSequenceMatchRegionP9WKJ595 faldo:begin ?templateMotifSequenceMatchBeginP9WKJ596 . ?templateMotifSequenceMatchBeginP9WKJ596 faldo:position ?templateMotifSequenceMatchBeginPositionP9WKJ591 ; faldo:reference isoform:P9WKJ5-1 . ?templateMotifSequenceProfileAlignmentOperationP9WKJ597 edam:has_input signature:MF_00012 ; rdf:type edam:operation_0300 . ?targetMotifMatch98 faldo:location ?targetMotifMatchRegionMatch99 ; edam:is_output_of ?targetMotifSequenceAlignmentOperationMF_00012101 ; rdf:type edam:data_0869 ; rdf:value ?targetMotifMatchCigarP9WKJ5MF_0001292 . ?targetMotifMatchRegionMatch99 faldo:begin ?targetMotifMatchRegionMatchBeginMF_00012100 . ?targetMotifMatchRegionMatchBeginMF_00012100 faldo:position ?targetMotifMatchRegionMatchBeginPositionMF_0001293 ; faldo:reference ?thisSequence . ?targetMotifSequenceAlignmentOperationMF_00012101 edam:has_input signature:MF_00012 ; rdf:type edam:operation_0300 . BIND(STRLEN(REPLACE(SUBSTR(?templateMotifCigarP9WKJ5MF_0001290, 1, (STRLEN(?templateMotifCigarP9WKJ5MF_0001290) - STRLEN(REPLACE(?templateMotifCigarP9WKJ5MF_0001290, CONCAT('^(?:-*[^-]){', STR(((64 - ?templateMotifSequenceMatchBeginPositionP9WKJ591) + 1)), '}'), '')))), '[a-z]', '')) AS ?step1102) . BIND((STRLEN(SUBSTR(?targetMotifMatchCigarP9WKJ5MF_0001292, 1, (STRLEN(?targetMotifMatchCigarP9WKJ5MF_0001292) - STRLEN(REPLACE(?targetMotifMatchCigarP9WKJ5MF_0001292, CONCAT('^(?:[a-z]*(?:[A-Z]|-)){', STR(?step1102), '}'), ''))))) - STRLEN(REPLACE(SUBSTR(?targetMotifMatchCigarP9WKJ5MF_0001292, 1, (STRLEN(?targetMotifMatchCigarP9WKJ5MF_0001292) - STRLEN(REPLACE(?targetMotifMatchCigarP9WKJ5MF_0001292, CONCAT('^(?:[a-z]*(?:[A-Z]|-)){', STR(?step1102), '}'), '')))), '[^-]', ''))) AS ?step2103) . BIND(((?step2103 + ?targetMotifMatchRegionMatchBeginPositionMF_0001293) - 1) AS ?thisPositionOn24) . BIND(?thisPositionOn24 AS ?thisPositionOn25) . BIND(?this AS ?pfs1t104) . BIND(URI(CONCAT(STR(?thisSequence), '#position', STR(?thisPositionOn24))) AS ?pfsb21) . BIND(URI(CONCAT(STR(?thisSequence), '#position', STR(?thisPositionOn25))) AS ?pfse22) . FILTER ((SUBSTR(?thisSequenceValue, ?thisPositionOn24, 1) = 'C')) . BIND(URI(CONCAT(STR(?this), '#MF_00012a20')) AS ?annotation20) . BIND(?this AS ?pfs19) . } OPTIONAL { ?this up:sequence ?thisSequence . ?thisSequence rdf:value ?thisSequenceValue . ?templateMotifMatch109 faldo:location ?templateMotifSequenceMatchRegionP9WKJ5110 ; edam:is_output_of ?templateMotifSequenceProfileAlignmentOperationP9WKJ5112 ; rdf:type edam:data_0869 ; rdf:value ?templateMotifCigarP9WKJ5MF_00012105 . ?templateMotifSequenceMatchRegionP9WKJ5110 faldo:begin ?templateMotifSequenceMatchBeginP9WKJ5111 . ?templateMotifSequenceMatchBeginP9WKJ5111 faldo:position ?templateMotifSequenceMatchBeginPositionP9WKJ5106 ; faldo:reference isoform:P9WKJ5-1 . ?templateMotifSequenceProfileAlignmentOperationP9WKJ5112 edam:has_input signature:MF_00012 ; rdf:type edam:operation_0300 . ?targetMotifMatch113 faldo:location ?targetMotifMatchRegionMatch114 ; edam:is_output_of ?targetMotifSequenceAlignmentOperationMF_00012116 ; rdf:type edam:data_0869 ; rdf:value ?targetMotifMatchCigarP9WKJ5MF_00012107 . ?targetMotifMatchRegionMatch114 faldo:begin ?targetMotifMatchRegionMatchBeginMF_00012115 . ?targetMotifMatchRegionMatchBeginMF_00012115 faldo:position ?targetMotifMatchRegionMatchBeginPositionMF_00012108 ; faldo:reference ?thisSequence . ?targetMotifSequenceAlignmentOperationMF_00012116 edam:has_input signature:MF_00012 ; rdf:type edam:operation_0300 . BIND(STRLEN(REPLACE(SUBSTR(?templateMotifCigarP9WKJ5MF_00012105, 1, (STRLEN(?templateMotifCigarP9WKJ5MF_00012105) - STRLEN(REPLACE(?templateMotifCigarP9WKJ5MF_00012105, CONCAT('^(?:-*[^-]){', STR(((96 - ?templateMotifSequenceMatchBeginPositionP9WKJ5106) + 1)), '}'), '')))), '[a-z]', '')) AS ?step1117) . BIND((STRLEN(SUBSTR(?targetMotifMatchCigarP9WKJ5MF_00012107, 1, (STRLEN(?targetMotifMatchCigarP9WKJ5MF_00012107) - STRLEN(REPLACE(?targetMotifMatchCigarP9WKJ5MF_00012107, CONCAT('^(?:[a-z]*(?:[A-Z]|-)){', STR(?step1117), '}'), ''))))) - STRLEN(REPLACE(SUBSTR(?targetMotifMatchCigarP9WKJ5MF_00012107, 1, (STRLEN(?targetMotifMatchCigarP9WKJ5MF_00012107) - STRLEN(REPLACE(?targetMotifMatchCigarP9WKJ5MF_00012107, CONCAT('^(?:[a-z]*(?:[A-Z]|-)){', STR(?step1117), '}'), '')))), '[^-]', ''))) AS ?step2118) . BIND(((?step2118 + ?targetMotifMatchRegionMatchBeginPositionMF_00012108) - 1) AS ?thisPositionOn31) . BIND(?thisPositionOn31 AS ?thisPositionOn32) . BIND(?this AS ?pfs1t119) . BIND(URI(CONCAT(STR(?thisSequence), '#position', STR(?thisPositionOn31))) AS ?pfsb28) . BIND(URI(CONCAT(STR(?thisSequence), '#position', STR(?thisPositionOn32))) AS ?pfse29) . FILTER ((SUBSTR(?thisSequenceValue, ?thisPositionOn31, 1) = 'D')) . BIND(URI(CONCAT(STR(?this), '#MF_00012a27')) AS ?annotation27) . BIND(?this AS ?pfs26) . } OPTIONAL { ?this up:sequence ?thisSequence . ?thisSequence rdf:value ?thisSequenceValue . ?templateMotifMatch124 faldo:location ?templateMotifSequenceMatchRegionP9WKJ5125 ; edam:is_output_of ?templateMotifSequenceProfileAlignmentOperationP9WKJ5127 ; rdf:type edam:data_0869 ; rdf:value ?templateMotifCigarP9WKJ5MF_00012120 . ?templateMotifSequenceMatchRegionP9WKJ5125 faldo:begin ?templateMotifSequenceMatchBeginP9WKJ5126 . ?templateMotifSequenceMatchBeginP9WKJ5126 faldo:position ?templateMotifSequenceMatchBeginPositionP9WKJ5121 ; faldo:reference isoform:P9WKJ5-1 . ?templateMotifSequenceProfileAlignmentOperationP9WKJ5127 edam:has_input signature:MF_00012 ; rdf:type edam:operation_0300 . ?targetMotifMatch128 faldo:location ?targetMotifMatchRegionMatch129 ; edam:is_output_of ?targetMotifSequenceAlignmentOperationMF_00012131 ; rdf:type edam:data_0869 ; rdf:value ?targetMotifMatchCigarP9WKJ5MF_00012122 . ?targetMotifMatchRegionMatch129 faldo:begin ?targetMotifMatchRegionMatchBeginMF_00012130 . ?targetMotifMatchRegionMatchBeginMF_00012130 faldo:position ?targetMotifMatchRegionMatchBeginPositionMF_00012123 ; faldo:reference ?thisSequence . ?targetMotifSequenceAlignmentOperationMF_00012131 edam:has_input signature:MF_00012 ; rdf:type edam:operation_0300 . BIND(STRLEN(REPLACE(SUBSTR(?templateMotifCigarP9WKJ5MF_00012120, 1, (STRLEN(?templateMotifCigarP9WKJ5MF_00012120) - STRLEN(REPLACE(?templateMotifCigarP9WKJ5MF_00012120, CONCAT('^(?:-*[^-]){', STR(((122 - ?templateMotifSequenceMatchBeginPositionP9WKJ5121) + 1)), '}'), '')))), '[a-z]', '')) AS ?step1132) . BIND((STRLEN(SUBSTR(?targetMotifMatchCigarP9WKJ5MF_00012122, 1, (STRLEN(?targetMotifMatchCigarP9WKJ5MF_00012122) - STRLEN(REPLACE(?targetMotifMatchCigarP9WKJ5MF_00012122, CONCAT('^(?:[a-z]*(?:[A-Z]|-)){', STR(?step1132), '}'), ''))))) - STRLEN(REPLACE(SUBSTR(?targetMotifMatchCigarP9WKJ5MF_00012122, 1, (STRLEN(?targetMotifMatchCigarP9WKJ5MF_00012122) - STRLEN(REPLACE(?targetMotifMatchCigarP9WKJ5MF_00012122, CONCAT('^(?:[a-z]*(?:[A-Z]|-)){', STR(?step1132), '}'), '')))), '[^-]', ''))) AS ?step2133) . BIND(((?step2133 + ?targetMotifMatchRegionMatchBeginPositionMF_00012123) - 1) AS ?thisPositionOn38) . BIND(?thisPositionOn38 AS ?thisPositionOn39) . BIND(?this AS ?pfs1t134) . BIND(URI(CONCAT(STR(?thisSequence), '#position', STR(?thisPositionOn38))) AS ?pfsb35) . BIND(URI(CONCAT(STR(?thisSequence), '#position', STR(?thisPositionOn39))) AS ?pfse36) . FILTER ((SUBSTR(?thisSequenceValue, ?thisPositionOn38, 1) = 'C')) . BIND(URI(CONCAT(STR(?this), '#MF_00012a34')) AS ?annotation34) . BIND(?this AS ?pfs33) . } OPTIONAL { ?this up:sequence ?thisSequence . ?thisSequence rdf:value ?thisSequenceValue . ?templateMotifMatch139 faldo:location ?templateMotifSequenceMatchRegionP9WKJ5140 ; edam:is_output_of ?templateMotifSequenceProfileAlignmentOperationP9WKJ5142 ; rdf:type edam:data_0869 ; rdf:value ?templateMotifCigarP9WKJ5MF_00012135 . ?templateMotifSequenceMatchRegionP9WKJ5140 faldo:begin ?templateMotifSequenceMatchBeginP9WKJ5141 . ?templateMotifSequenceMatchBeginP9WKJ5141 faldo:position ?templateMotifSequenceMatchBeginPositionP9WKJ5136 ; faldo:reference isoform:P9WKJ5-1 . ?templateMotifSequenceProfileAlignmentOperationP9WKJ5142 edam:has_input signature:MF_00012 ; rdf:type edam:operation_0300 . ?targetMotifMatch143 faldo:location ?targetMotifMatchRegionMatch144 ; edam:is_output_of ?targetMotifSequenceAlignmentOperationMF_00012146 ; rdf:type edam:data_0869 ; rdf:value ?targetMotifMatchCigarP9WKJ5MF_00012137 . ?targetMotifMatchRegionMatch144 faldo:begin ?targetMotifMatchRegionMatchBeginMF_00012145 . ?targetMotifMatchRegionMatchBeginMF_00012145 faldo:position ?targetMotifMatchRegionMatchBeginPositionMF_00012138 ; faldo:reference ?thisSequence . ?targetMotifSequenceAlignmentOperationMF_00012146 edam:has_input signature:MF_00012 ; rdf:type edam:operation_0300 . BIND(STRLEN(REPLACE(SUBSTR(?templateMotifCigarP9WKJ5MF_00012135, 1, (STRLEN(?templateMotifCigarP9WKJ5MF_00012135) - STRLEN(REPLACE(?templateMotifCigarP9WKJ5MF_00012135, CONCAT('^(?:-*[^-]){', STR(((138 - ?templateMotifSequenceMatchBeginPositionP9WKJ5136) + 1)), '}'), '')))), '[a-z]', '')) AS ?step1147) . BIND((STRLEN(SUBSTR(?targetMotifMatchCigarP9WKJ5MF_00012137, 1, (STRLEN(?targetMotifMatchCigarP9WKJ5MF_00012137) - STRLEN(REPLACE(?targetMotifMatchCigarP9WKJ5MF_00012137, CONCAT('^(?:[a-z]*(?:[A-Z]|-)){', STR(?step1147), '}'), ''))))) - STRLEN(REPLACE(SUBSTR(?targetMotifMatchCigarP9WKJ5MF_00012137, 1, (STRLEN(?targetMotifMatchCigarP9WKJ5MF_00012137) - STRLEN(REPLACE(?targetMotifMatchCigarP9WKJ5MF_00012137, CONCAT('^(?:[a-z]*(?:[A-Z]|-)){', STR(?step1147), '}'), '')))), '[^-]', ''))) AS ?step2148) . BIND(((?step2148 + ?targetMotifMatchRegionMatchBeginPositionMF_00012138) - 1) AS ?thisPositionOn45) . BIND(?thisPositionOn45 AS ?thisPositionOn46) . BIND(?this AS ?pfs1t149) . BIND(URI(CONCAT(STR(?thisSequence), '#position', STR(?thisPositionOn45))) AS ?pfsb42) . BIND(URI(CONCAT(STR(?thisSequence), '#position', STR(?thisPositionOn46))) AS ?pfse43) . FILTER ((SUBSTR(?thisSequenceValue, ?thisPositionOn45, 1) = 'D')) . BIND(URI(CONCAT(STR(?this), '#MF_00012a41')) AS ?annotation41) . BIND(?this AS ?pfs40) . } OPTIONAL { ?this up:sequence ?thisSequence . ?thisSequence rdf:value ?thisSequenceValue . ?templateMotifMatch154 faldo:location ?templateMotifSequenceMatchRegionP9WKJ5155 ; edam:is_output_of ?templateMotifSequenceProfileAlignmentOperationP9WKJ5157 ; rdf:type edam:data_0869 ; rdf:value ?templateMotifCigarP9WKJ5MF_00012150 . ?templateMotifSequenceMatchRegionP9WKJ5155 faldo:begin ?templateMotifSequenceMatchBeginP9WKJ5156 . ?templateMotifSequenceMatchBeginP9WKJ5156 faldo:position ?templateMotifSequenceMatchBeginPositionP9WKJ5151 ; faldo:reference isoform:P9WKJ5-1 . ?templateMotifSequenceProfileAlignmentOperationP9WKJ5157 edam:has_input signature:MF_00012 ; rdf:type edam:operation_0300 . ?targetMotifMatch158 faldo:location ?targetMotifMatchRegionMatch159 ; edam:is_output_of ?targetMotifSequenceAlignmentOperationMF_00012161 ; rdf:type edam:data_0869 ; rdf:value ?targetMotifMatchCigarP9WKJ5MF_00012152 . ?targetMotifMatchRegionMatch159 faldo:begin ?targetMotifMatchRegionMatchBeginMF_00012160 . ?targetMotifMatchRegionMatchBeginMF_00012160 faldo:position ?targetMotifMatchRegionMatchBeginPositionMF_00012153 ; faldo:reference ?thisSequence . ?targetMotifSequenceAlignmentOperationMF_00012161 edam:has_input signature:MF_00012 ; rdf:type edam:operation_0300 . BIND(STRLEN(REPLACE(SUBSTR(?templateMotifCigarP9WKJ5MF_00012150, 1, (STRLEN(?templateMotifCigarP9WKJ5MF_00012150) - STRLEN(REPLACE(?templateMotifCigarP9WKJ5MF_00012150, CONCAT('^(?:-*[^-]){', STR(((139 - ?templateMotifSequenceMatchBeginPositionP9WKJ5151) + 1)), '}'), '')))), '[a-z]', '')) AS ?step1162) . BIND((STRLEN(SUBSTR(?targetMotifMatchCigarP9WKJ5MF_00012152, 1, (STRLEN(?targetMotifMatchCigarP9WKJ5MF_00012152) - STRLEN(REPLACE(?targetMotifMatchCigarP9WKJ5MF_00012152, CONCAT('^(?:[a-z]*(?:[A-Z]|-)){', STR(?step1162), '}'), ''))))) - STRLEN(REPLACE(SUBSTR(?targetMotifMatchCigarP9WKJ5MF_00012152, 1, (STRLEN(?targetMotifMatchCigarP9WKJ5MF_00012152) - STRLEN(REPLACE(?targetMotifMatchCigarP9WKJ5MF_00012152, CONCAT('^(?:[a-z]*(?:[A-Z]|-)){', STR(?step1162), '}'), '')))), '[^-]', ''))) AS ?step2163) . BIND(((?step2163 + ?targetMotifMatchRegionMatchBeginPositionMF_00012153) - 1) AS ?thisPositionOn52) . BIND(?thisPositionOn52 AS ?thisPositionOn53) . BIND(?this AS ?pfs1t164) . BIND(URI(CONCAT(STR(?thisSequence), '#position', STR(?thisPositionOn52))) AS ?pfsb49) . BIND(URI(CONCAT(STR(?thisSequence), '#position', STR(?thisPositionOn53))) AS ?pfse50) . FILTER ((SUBSTR(?thisSequenceValue, ?thisPositionOn52, 1) = 'K')) . BIND(URI(CONCAT(STR(?this), '#MF_00012a48')) AS ?annotation48) . BIND(?this AS ?pfs47) . } OPTIONAL { ?this up:sequence ?thisSequence . ?thisSequence rdf:value ?thisSequenceValue . ?templateMotifMatch169 faldo:location ?templateMotifSequenceMatchRegionP9WKJ5170 ; edam:is_output_of ?templateMotifSequenceProfileAlignmentOperationP9WKJ5172 ; rdf:type edam:data_0869 ; rdf:value ?templateMotifCigarP9WKJ5MF_00012165 . ?templateMotifSequenceMatchRegionP9WKJ5170 faldo:begin ?templateMotifSequenceMatchBeginP9WKJ5171 . ?templateMotifSequenceMatchBeginP9WKJ5171 faldo:position ?templateMotifSequenceMatchBeginPositionP9WKJ5166 ; faldo:reference isoform:P9WKJ5-1 . ?templateMotifSequenceProfileAlignmentOperationP9WKJ5172 edam:has_input signature:MF_00012 ; rdf:type edam:operation_0300 . ?targetMotifMatch173 faldo:location ?targetMotifMatchRegionMatch174 ; edam:is_output_of ?targetMotifSequenceAlignmentOperationMF_00012176 ; rdf:type edam:data_0869 ; rdf:value ?targetMotifMatchCigarP9WKJ5MF_00012167 . ?targetMotifMatchRegionMatch174 faldo:begin ?targetMotifMatchRegionMatchBeginMF_00012175 . ?targetMotifMatchRegionMatchBeginMF_00012175 faldo:position ?targetMotifMatchRegionMatchBeginPositionMF_00012168 ; faldo:reference ?thisSequence . ?targetMotifSequenceAlignmentOperationMF_00012176 edam:has_input signature:MF_00012 ; rdf:type edam:operation_0300 . BIND(STRLEN(REPLACE(SUBSTR(?templateMotifCigarP9WKJ5MF_00012165, 1, (STRLEN(?templateMotifCigarP9WKJ5MF_00012165) - STRLEN(REPLACE(?templateMotifCigarP9WKJ5MF_00012165, CONCAT('^(?:-*[^-]){', STR(((195 - ?templateMotifSequenceMatchBeginPositionP9WKJ5166) + 1)), '}'), '')))), '[a-z]', '')) AS ?step1177) . BIND((STRLEN(SUBSTR(?targetMotifMatchCigarP9WKJ5MF_00012167, 1, (STRLEN(?targetMotifMatchCigarP9WKJ5MF_00012167) - STRLEN(REPLACE(?targetMotifMatchCigarP9WKJ5MF_00012167, CONCAT('^(?:[a-z]*(?:[A-Z]|-)){', STR(?step1177), '}'), ''))))) - STRLEN(REPLACE(SUBSTR(?targetMotifMatchCigarP9WKJ5MF_00012167, 1, (STRLEN(?targetMotifMatchCigarP9WKJ5MF_00012167) - STRLEN(REPLACE(?targetMotifMatchCigarP9WKJ5MF_00012167, CONCAT('^(?:[a-z]*(?:[A-Z]|-)){', STR(?step1177), '}'), '')))), '[^-]', ''))) AS ?step2178) . BIND(((?step2178 + ?targetMotifMatchRegionMatchBeginPositionMF_00012168) - 1) AS ?thisPositionOn59) . BIND(?thisPositionOn59 AS ?thisPositionOn60) . BIND(?this AS ?pfs1t179) . BIND(URI(CONCAT(STR(?thisSequence), '#position', STR(?thisPositionOn59))) AS ?pfsb56) . BIND(URI(CONCAT(STR(?thisSequence), '#position', STR(?thisPositionOn60))) AS ?pfse57) . FILTER ((SUBSTR(?thisSequenceValue, ?thisPositionOn59, 1) = 'C')) . BIND(URI(CONCAT(STR(?this), '#MF_00012a55')) AS ?annotation55) . BIND(?this AS ?pfs54) . } OPTIONAL { ?this up:sequence ?thisSequence . ?thisSequence rdf:value ?thisSequenceValue . ?templateMotifMatch184 faldo:location ?templateMotifSequenceMatchRegionP9WKJ5185 ; edam:is_output_of ?templateMotifSequenceProfileAlignmentOperationP9WKJ5187 ; rdf:type edam:data_0869 ; rdf:value ?templateMotifCigarP9WKJ5MF_00012180 . ?templateMotifSequenceMatchRegionP9WKJ5185 faldo:begin ?templateMotifSequenceMatchBeginP9WKJ5186 . ?templateMotifSequenceMatchBeginP9WKJ5186 faldo:position ?templateMotifSequenceMatchBeginPositionP9WKJ5181 ; faldo:reference isoform:P9WKJ5-1 . ?templateMotifSequenceProfileAlignmentOperationP9WKJ5187 edam:has_input signature:MF_00012 ; rdf:type edam:operation_0300 . ?targetMotifMatch188 faldo:location ?targetMotifMatchRegionMatch189 ; edam:is_output_of ?targetMotifSequenceAlignmentOperationMF_00012191 ; rdf:type edam:data_0869 ; rdf:value ?targetMotifMatchCigarP9WKJ5MF_00012182 . ?targetMotifMatchRegionMatch189 faldo:begin ?targetMotifMatchRegionMatchBeginMF_00012190 . ?targetMotifMatchRegionMatchBeginMF_00012190 faldo:position ?targetMotifMatchRegionMatchBeginPositionMF_00012183 ; faldo:reference ?thisSequence . ?targetMotifSequenceAlignmentOperationMF_00012191 edam:has_input signature:MF_00012 ; rdf:type edam:operation_0300 . BIND(STRLEN(REPLACE(SUBSTR(?templateMotifCigarP9WKJ5MF_00012180, 1, (STRLEN(?templateMotifCigarP9WKJ5MF_00012180) - STRLEN(REPLACE(?templateMotifCigarP9WKJ5MF_00012180, CONCAT('^(?:-*[^-]){', STR(((465 - ?templateMotifSequenceMatchBeginPositionP9WKJ5181) + 1)), '}'), '')))), '[a-z]', '')) AS ?step1192) . BIND((STRLEN(SUBSTR(?targetMotifMatchCigarP9WKJ5MF_00012182, 1, (STRLEN(?targetMotifMatchCigarP9WKJ5MF_00012182) - STRLEN(REPLACE(?targetMotifMatchCigarP9WKJ5MF_00012182, CONCAT('^(?:[a-z]*(?:[A-Z]|-)){', STR(?step1192), '}'), ''))))) - STRLEN(REPLACE(SUBSTR(?targetMotifMatchCigarP9WKJ5MF_00012182, 1, (STRLEN(?targetMotifMatchCigarP9WKJ5MF_00012182) - STRLEN(REPLACE(?targetMotifMatchCigarP9WKJ5MF_00012182, CONCAT('^(?:[a-z]*(?:[A-Z]|-)){', STR(?step1192), '}'), '')))), '[^-]', ''))) AS ?step2193) . BIND(((?step2193 + ?targetMotifMatchRegionMatchBeginPositionMF_00012183) - 1) AS ?thisPositionOn66) . BIND(?thisPositionOn66 AS ?thisPositionOn67) . BIND(?this AS ?pfs1t194) . BIND(URI(CONCAT(STR(?thisSequence), '#position', STR(?thisPositionOn66))) AS ?pfsb63) . BIND(URI(CONCAT(STR(?thisSequence), '#position', STR(?thisPositionOn67))) AS ?pfse64) . FILTER ((SUBSTR(?thisSequenceValue, ?thisPositionOn66, 1) = 'E')) . BIND(URI(CONCAT(STR(?this), '#MF_00012a62')) AS ?annotation62) . BIND(?this AS ?pfs61) . } OPTIONAL { ?this up:sequence ?thisSequence . ?thisSequence rdf:value ?thisSequenceValue . ?templateMotifMatch199 faldo:location ?templateMotifSequenceMatchRegionP9WKJ5200 ; edam:is_output_of ?templateMotifSequenceProfileAlignmentOperationP9WKJ5202 ; rdf:type edam:data_0869 ; rdf:value ?templateMotifCigarP9WKJ5MF_00012195 . ?templateMotifSequenceMatchRegionP9WKJ5200 faldo:begin ?templateMotifSequenceMatchBeginP9WKJ5201 . ?templateMotifSequenceMatchBeginP9WKJ5201 faldo:position ?templateMotifSequenceMatchBeginPositionP9WKJ5196 ; faldo:reference isoform:P9WKJ5-1 . ?templateMotifSequenceProfileAlignmentOperationP9WKJ5202 edam:has_input signature:MF_00012 ; rdf:type edam:operation_0300 . ?targetMotifMatch203 faldo:location ?targetMotifMatchRegionMatch204 ; edam:is_output_of ?targetMotifSequenceAlignmentOperationMF_00012206 ; rdf:type edam:data_0869 ; rdf:value ?targetMotifMatchCigarP9WKJ5MF_00012197 . ?targetMotifMatchRegionMatch204 faldo:begin ?targetMotifMatchRegionMatchBeginMF_00012205 . ?targetMotifMatchRegionMatchBeginMF_00012205 faldo:position ?targetMotifMatchRegionMatchBeginPositionMF_00012198 ; faldo:reference ?thisSequence . ?targetMotifSequenceAlignmentOperationMF_00012206 edam:has_input signature:MF_00012 ; rdf:type edam:operation_0300 . BIND(STRLEN(REPLACE(SUBSTR(?templateMotifCigarP9WKJ5MF_00012195, 1, (STRLEN(?templateMotifCigarP9WKJ5MF_00012195) - STRLEN(REPLACE(?templateMotifCigarP9WKJ5MF_00012195, CONCAT('^(?:-*[^-]){', STR(((139 - ?templateMotifSequenceMatchBeginPositionP9WKJ5196) + 1)), '}'), '')))), '[a-z]', '')) AS ?step1207) . BIND((STRLEN(SUBSTR(?targetMotifMatchCigarP9WKJ5MF_00012197, 1, (STRLEN(?targetMotifMatchCigarP9WKJ5MF_00012197) - STRLEN(REPLACE(?targetMotifMatchCigarP9WKJ5MF_00012197, CONCAT('^(?:[a-z]*(?:[A-Z]|-)){', STR(?step1207), '}'), ''))))) - STRLEN(REPLACE(SUBSTR(?targetMotifMatchCigarP9WKJ5MF_00012197, 1, (STRLEN(?targetMotifMatchCigarP9WKJ5MF_00012197) - STRLEN(REPLACE(?targetMotifMatchCigarP9WKJ5MF_00012197, CONCAT('^(?:[a-z]*(?:[A-Z]|-)){', STR(?step1207), '}'), '')))), '[^-]', ''))) AS ?step2208) . BIND(((?step2208 + ?targetMotifMatchRegionMatchBeginPositionMF_00012198) - 1) AS ?thisPositionOn72) . BIND(?thisPositionOn72 AS ?thisPositionOn73) . BIND(?this AS ?pfs1t209) . BIND(URI(CONCAT(STR(?thisSequence), '#position', STR(?thisPositionOn72))) AS ?pfsb70) . BIND(URI(CONCAT(STR(?thisSequence), '#position', STR(?thisPositionOn73))) AS ?pfse71) . FILTER ((SUBSTR(?thisSequenceValue, ?thisPositionOn72, 1) = 'K')) . BIND(URI(CONCAT(STR(?this), '#MF_00012a69')) AS ?annotation69) . BIND(?this AS ?pfs68) . } }