CONSTRUCT { _:135558 up:source unirule:MF_00339 . _:135559 up:source unirule:MF_00339 . _:135560 up:source unirule:MF_00339 . _:135561 up:source unirule:MF_00339 . _:135562 up:source unirule:MF_00339 . _:135563 up:source unirule:MF_00339 . _:135564 up:source unirule:MF_00339 . _:135565 up:source unirule:MF_00339 . _:135566 up:source unirule:MF_00339 . _:135567 up:source unirule:MF_00339 . _:135568 up:source unirule:MF_00339 . _:135569 up:source unirule:MF_00339 . _:135570 up:source unirule:MF_00339 . _:135571 up:source unirule:MF_00339 . _:135572 up:source unirule:MF_00339 . _:135573 up:source unirule:MF_00339 . _:135574 up:source unirule:MF_00339 . _:135575 up:source unirule:MF_00339 . _:135576 up:source unirule:MF_00339 . _:135577 up:source unirule:MF_00339 . _:135578 up:source unirule:MF_00339 . _:135579 up:source unirule:MF_00339 . _:135580 up:source unirule:MF_00339 . _:135581 up:source unirule:MF_00339 . _:135582 up:source unirule:MF_00339 . _:135583 up:source unirule:MF_00339 . _:135584 up:source unirule:MF_00339 . _:135585 up:source unirule:MF_00339 . _:135586 up:source unirule:MF_00339 . _:135587 up:source unirule:MF_00339 . _:135588 up:source unirule:MF_00339 . _:135589 up:source unirule:MF_00339 . _:135590 up:source unirule:MF_00339 . _:135591 up:source unirule:MF_00339 . _:135592 up:source unirule:MF_00339 . _:135593 up:source unirule:MF_00339 . _:135594 up:source unirule:MF_00339 . _:135595 up:source unirule:MF_00339 . _:135596 up:source unirule:MF_00339 . _:135597 up:source unirule:MF_00339 . ?this up:alternativeName ?name1 ; up:annotation ?annotation3 , ?annotation4 , ?annotation6 , ?annotation7 , ?annotation8 , ?annotation9 , ?annotation10 , ?annotation12 ; up:classifiedWith GO:0003872 , GO:0005737 , GO:0006096 , keyword:21 , keyword:324 , keyword:418 , keyword:460 , keyword:479 , keyword:547 , keyword:67 , keyword:808 , keyword:963 ; up:recommendedName ?name0 . ?name0 up:ecName '2.7.1.11' ; up:fullName 'ATP-dependent 6-phosphofructokinase' ; up:shortName 'ATP-PFK' , 'Phosphofructokinase' ; rdf:type up:Structured_Name . ?name1 up:fullName 'Phosphohexokinase' ; rdf:type up:Structured_Name . ?gene2 skos:prefLabel 'pfkA' . ?annotation3 a up:Function_Annotation ; rdfs:comment 'Catalyzes the phosphorylation of D-fructose 6-phosphate to fructose 1,6-bisphosphate by ATP, the first committing step of glycolysis.' . ?annotation4 up:activity ?activity5 ; rdf:type up:Catalytic_Activity_Annotation . ?activity5 up:catalyticActivity <http://rdf.rhea-db.org/16109>; up:enzymeClass <http://purl.uniprot.org/enzyme/2.7.1.11>. ?annotation6 up:cofactor chebi:18420 ; rdf:type up:Cofactor_Annotation . ?annotation7 a up:Activity_Regulation_Annotation ; rdfs:comment 'Allosterically activated by ADP and other diphosphonucleosides, and allosterically inhibited by phosphoenolpyruvate.' . ?annotation8 a up:Pathway_Annotation ; rdfs:comment 'Carbohydrate degradation; glycolysis; D-glyceraldehyde 3-phosphate and glycerone phosphate from D-glucose: step 3/4.' . ?annotation9 a up:Subunit_Annotation ; rdfs:comment 'Homotetramer.' . ?annotation10 a up:Subcellular_Location_Annotation . ?annotation10li11 up:cellularComponent <http://purl.uniprot.org/locations/null>. ?annotation12 a up:Similarity_Annotation ; rdfs:comment "Belongs to the phosphofructokinase type A (PFKA) family. ATP-dependent PFK group I subfamily. Prokaryotic clade 'B1' sub-subfamily." . ?pfs13 up:annotation ?annotation14 . ?annotation14 faldo:begin ?pfsb15 ; faldo:end ?pfse16 ; up:ligand ?ligand17 ; rdf:type up:Binding_Site_Annotation . ?pfsb15 faldo:position ?thisPositionOn18 ; rdf:type faldo:ExactPosition . ?pfse16 faldo:position ?thisPositionOn19 ; rdf:type faldo:ExactPosition . ?ligand17 rdfs:subClassOf chebi:30616 . ?pfs20 up:annotation ?annotation21 . ?annotation21 faldo:begin ?pfsb22 ; faldo:end ?pfse23 ; up:ligand ?ligand24 ; rdf:type up:Binding_Site_Annotation . ?pfsb22 faldo:position ?thisPositionOn25 ; rdf:type faldo:ExactPosition . ?pfse23 faldo:position ?thisPositionOn26 ; rdf:type faldo:ExactPosition . ?ligand24 rdfs:subClassOf chebi:30616 . ?pfs27 up:annotation ?annotation28 . ?annotation28 faldo:begin ?pfsb29 ; faldo:end ?pfse30 ; up:ligand ?ligand31 ; rdf:type up:Binding_Site_Annotation . ?pfsb29 faldo:position ?thisPositionOn32 ; rdf:type faldo:ExactPosition . ?pfse30 faldo:position ?thisPositionOn33 ; rdf:type faldo:ExactPosition . ?ligand31 rdfs:subClassOf chebi:456216 . ?pfs34 up:annotation ?annotation35 . ?annotation35 faldo:begin ?pfsb36 ; faldo:end ?pfse37 ; up:ligand ?ligand38 ; rdf:type up:Binding_Site_Annotation . ?pfsb36 faldo:position ?thisPositionOn39 ; rdf:type faldo:ExactPosition . ?pfse37 faldo:position ?thisPositionOn40 ; rdf:type faldo:ExactPosition . ?ligand38 rdfs:subClassOf chebi:456216 . ?pfs41 up:annotation ?annotation42 . ?annotation42 faldo:begin ?pfsb43 ; faldo:end ?pfse44 ; up:ligand ?ligand45 ; rdf:type up:Binding_Site_Annotation ; rdfs:comment 'in other chain' . ?pfsb43 faldo:position ?thisPositionOn47 ; rdf:type faldo:ExactPosition . ?pfse44 faldo:position ?thisPositionOn48 ; rdf:type faldo:ExactPosition . ?ligand45 rdfs:subClassOf ?molecule46 . ?molecule46 rdfs:label 'substrate' . ?pfs49 up:annotation ?annotation50 . ?annotation50 faldo:begin ?pfsb51 ; faldo:end ?pfse52 ; up:ligand ?ligand53 ; rdf:type up:Binding_Site_Annotation ; rdfs:comment 'in other chain' . ?pfsb51 faldo:position ?thisPositionOn55 ; rdf:type faldo:ExactPosition . ?pfse52 faldo:position ?thisPositionOn56 ; rdf:type faldo:ExactPosition . ?ligand53 rdfs:subClassOf ?molecule54 . ?molecule54 rdfs:label 'substrate' . ?pfs57 up:annotation ?annotation58 . ?annotation58 faldo:begin ?pfsb59 ; faldo:end ?pfse60 ; up:ligand ?ligand61 ; rdf:type up:Binding_Site_Annotation ; rdfs:comment 'in other chain' . ?pfsb59 faldo:position ?thisPositionOn62 ; rdf:type faldo:ExactPosition . ?pfse60 faldo:position ?thisPositionOn63 ; rdf:type faldo:ExactPosition . ?ligand61 rdfs:subClassOf chebi:456216 . ?pfs64 up:annotation ?annotation65 . ?annotation65 faldo:begin ?pfsb66 ; faldo:end ?pfse67 ; up:ligand ?ligand68 ; rdf:type up:Binding_Site_Annotation ; rdfs:comment 'in other chain' . ?pfsb66 faldo:position ?thisPositionOn69 ; rdf:type faldo:ExactPosition . ?pfse67 faldo:position ?thisPositionOn70 ; rdf:type faldo:ExactPosition . ?ligand68 rdfs:subClassOf chebi:456216 . ?pfs71 up:annotation ?annotation72 . ?annotation72 faldo:begin ?pfsb73 ; faldo:end ?pfse74 ; up:ligand ?ligand75 ; rdf:type up:Binding_Site_Annotation ; rdfs:comment 'in other chain' . ?pfsb73 faldo:position ?thisPositionOn77 ; rdf:type faldo:ExactPosition . ?pfse74 faldo:position ?thisPositionOn78 ; rdf:type faldo:ExactPosition . ?ligand75 rdfs:subClassOf ?molecule76 . ?molecule76 rdfs:label 'substrate' . ?pfs79 up:annotation ?annotation80 . ?annotation80 faldo:begin ?pfsb81 ; faldo:end ?pfse82 ; rdf:type up:Active_Site_Annotation ; rdfs:comment 'Proton acceptor' . ?pfsb81 faldo:position ?thisPositionOn83 ; rdf:type faldo:ExactPosition . ?pfse82 faldo:position ?thisPositionOn84 ; rdf:type faldo:ExactPosition . ?pfs85 up:annotation ?annotation86 . ?annotation86 faldo:begin ?pfsb87 ; faldo:end ?pfse88 ; up:ligand ?ligand89 ; rdf:type up:Binding_Site_Annotation . ?pfsb87 faldo:position ?thisPositionOn90 ; rdf:type faldo:ExactPosition . ?pfse88 faldo:position ?thisPositionOn91 ; rdf:type faldo:ExactPosition . ?ligand89 rdfs:subClassOf chebi:18420 . ?pfs92 up:annotation ?annotation93 . ?annotation93 faldo:begin ?pfsb94 ; faldo:end ?pfse95 ; up:ligand ?ligand96 ; rdf:type up:Binding_Site_Annotation . ?pfsb94 faldo:position ?thisPositionOn97 ; rdf:type faldo:ExactPosition . ?pfse95 faldo:position ?thisPositionOn98 ; rdf:type faldo:ExactPosition . ?ligand96 rdfs:subClassOf chebi:30616 . ?pfs99 up:annotation ?annotation100 . ?annotation100 faldo:begin ?pfsb101 ; faldo:end ?pfse102 ; up:ligand ?ligand103 ; rdf:type up:Binding_Site_Annotation ; rdfs:comment 'in other chain' . ?pfsb101 faldo:position ?thisPositionOn104 ; rdf:type faldo:ExactPosition . ?pfse102 faldo:position ?thisPositionOn105 ; rdf:type faldo:ExactPosition . ?ligand103 rdfs:subClassOf chebi:456216 . ?pfs106 up:annotation ?annotation107 . ?annotation107 faldo:begin ?pfsb108 ; faldo:end ?pfse109 ; up:ligand ?ligand110 ; rdf:type up:Binding_Site_Annotation . ?pfsb108 faldo:position ?thisPositionOn112 ; rdf:type faldo:ExactPosition . ?pfse109 faldo:position ?thisPositionOn113 ; rdf:type faldo:ExactPosition . ?ligand110 rdfs:subClassOf ?molecule111 . ?molecule111 rdfs:label 'substrate' . ?pfs114 up:annotation ?annotation115 . ?annotation115 faldo:begin ?pfsb116 ; faldo:end ?pfse117 ; up:ligand ?ligand118 ; rdf:type up:Binding_Site_Annotation ; rdfs:comment 'in other chain' . ?pfsb116 faldo:position ?thisPositionOn119 ; rdf:type faldo:ExactPosition . ?pfse117 faldo:position ?thisPositionOn120 ; rdf:type faldo:ExactPosition . ?ligand118 rdfs:subClassOf chebi:456216 . ?pfs121 up:annotation ?annotation122 . ?annotation122 faldo:begin ?pfsb123 ; faldo:end ?pfse124 ; up:ligand ?ligand125 ; rdf:type up:Binding_Site_Annotation ; rdfs:comment 'in other chain' . ?pfsb123 faldo:position ?thisPositionOn127 ; rdf:type faldo:ExactPosition . ?pfse124 faldo:position ?thisPositionOn128 ; rdf:type faldo:ExactPosition . ?ligand125 rdfs:subClassOf ?molecule126 . ?molecule126 rdfs:label 'substrate' . ?pfs129 up:annotation ?annotation130 . ?annotation130 faldo:begin ?pfsb131 ; faldo:end ?pfse132 ; up:ligand ?ligand133 ; rdf:type up:Binding_Site_Annotation . ?pfsb131 faldo:position ?thisPositionOn135 ; rdf:type faldo:ExactPosition . ?pfse132 faldo:position ?thisPositionOn136 ; rdf:type faldo:ExactPosition . ?ligand133 rdfs:subClassOf ?molecule134 . ?molecule134 rdfs:label 'substrate' . _:135598 a rdf:Statement ; up:attribution _:135558 ; rdf:subject ?this ; rdf:predicate up:recommendedName ; rdf:object ?name0 . _:135599 a rdf:Statement ; up:attribution _:135559 ; rdf:subject ?this ; rdf:predicate up:alternativeName ; rdf:object ?name1 . _:135600 a rdf:Statement ; up:attribution _:135560 ; rdf:subject ?gene2 ; rdf:predicate up:encodedBy ; rdf:object ?gene2 . _:135601 a rdf:Statement ; up:attribution _:135561 ; rdf:subject ?this ; rdf:predicate up:annotation ; rdf:object ?annotation3 . _:135602 a rdf:Statement ; up:attribution _:135562 ; rdf:subject ?this ; rdf:predicate up:annotation ; rdf:object ?annotation4 . _:135603 a rdf:Statement ; up:attribution _:135563 ; rdf:subject ?this ; rdf:predicate up:annotation ; rdf:object ?annotation6 . _:135604 a rdf:Statement ; up:attribution _:135564 ; rdf:subject ?this ; rdf:predicate up:annotation ; rdf:object ?annotation7 . _:135605 a rdf:Statement ; up:attribution _:135565 ; rdf:subject ?this ; rdf:predicate up:annotation ; rdf:object ?annotation8 . _:135606 a rdf:Statement ; up:attribution _:135566 ; rdf:subject ?this ; rdf:predicate up:annotation ; rdf:object ?annotation9 . _:135607 a rdf:Statement ; up:attribution _:135567 ; rdf:subject ?this ; rdf:predicate up:annotation ; rdf:object ?annotation10 . _:135608 a rdf:Statement ; up:attribution _:135568 ; rdf:subject ?this ; rdf:predicate up:annotation ; rdf:object ?annotation12 . _:135609 a rdf:Statement ; up:attribution _:135569 ; rdf:subject ?this ; rdf:predicate up:classifiedWith ; rdf:object keyword:21 . _:135610 a rdf:Statement ; up:attribution _:135570 ; rdf:subject ?this ; rdf:predicate up:classifiedWith ; rdf:object keyword:963 . _:135611 a rdf:Statement ; up:attribution _:135571 ; rdf:subject ?this ; rdf:predicate up:classifiedWith ; rdf:object keyword:418 . _:135612 a rdf:Statement ; up:attribution _:135572 ; rdf:subject ?this ; rdf:predicate up:classifiedWith ; rdf:object keyword:808 . _:135613 a rdf:Statement ; up:attribution _:135573 ; rdf:subject ?this ; rdf:predicate up:classifiedWith ; rdf:object keyword:324 . _:135614 a rdf:Statement ; up:attribution _:135574 ; rdf:subject ?this ; rdf:predicate up:classifiedWith ; rdf:object keyword:67 . _:135615 a rdf:Statement ; up:attribution _:135575 ; rdf:subject ?this ; rdf:predicate up:classifiedWith ; rdf:object keyword:547 . _:135616 a rdf:Statement ; up:attribution _:135576 ; rdf:subject ?this ; rdf:predicate up:classifiedWith ; rdf:object keyword:460 . _:135617 a rdf:Statement ; up:attribution _:135577 ; rdf:subject ?this ; rdf:predicate up:classifiedWith ; rdf:object keyword:479 . _:135618 a rdf:Statement ; up:attribution _:135578 ; rdf:subject ?this ; rdf:predicate up:classifiedWith ; rdf:object GO:0003872 . _:135619 a rdf:Statement ; up:attribution _:135579 ; rdf:subject ?this ; rdf:predicate up:classifiedWith ; rdf:object GO:0006096 . _:135620 a rdf:Statement ; up:attribution _:135580 ; rdf:subject ?this ; rdf:predicate up:classifiedWith ; rdf:object GO:0005737 . _:135621 a rdf:Statement ; up:source unirule:MF_00339 ; rdf:subject ?pfs13 ; rdf:predicate up:annotation ; rdf:object ?annotation14 . _:135622 a rdf:Statement ; up:attribution _:135581 ; rdf:subject ?pfs13 ; rdf:predicate up:annotation ; rdf:object ?annotation14 . _:135623 a rdf:Statement ; up:source unirule:MF_00339 ; rdf:subject ?pfs20 ; rdf:predicate up:annotation ; rdf:object ?annotation21 . _:135624 a rdf:Statement ; up:attribution _:135582 ; rdf:subject ?pfs20 ; rdf:predicate up:annotation ; rdf:object ?annotation21 . _:135625 a rdf:Statement ; up:source unirule:MF_00339 ; rdf:subject ?pfs27 ; rdf:predicate up:annotation ; rdf:object ?annotation28 . _:135626 a rdf:Statement ; up:attribution _:135583 ; rdf:subject ?pfs27 ; rdf:predicate up:annotation ; rdf:object ?annotation28 . _:135627 a rdf:Statement ; up:source unirule:MF_00339 ; rdf:subject ?pfs34 ; rdf:predicate up:annotation ; rdf:object ?annotation35 . _:135628 a rdf:Statement ; up:attribution _:135584 ; rdf:subject ?pfs34 ; rdf:predicate up:annotation ; rdf:object ?annotation35 . _:135629 a rdf:Statement ; up:source unirule:MF_00339 ; rdf:subject ?pfs41 ; rdf:predicate up:annotation ; rdf:object ?annotation42 . _:135630 a rdf:Statement ; up:attribution _:135585 ; rdf:subject ?pfs41 ; rdf:predicate up:annotation ; rdf:object ?annotation42 . _:135631 a rdf:Statement ; up:source unirule:MF_00339 ; rdf:subject ?pfs49 ; rdf:predicate up:annotation ; rdf:object ?annotation50 . _:135632 a rdf:Statement ; up:attribution _:135586 ; rdf:subject ?pfs49 ; rdf:predicate up:annotation ; rdf:object ?annotation50 . _:135633 a rdf:Statement ; up:source unirule:MF_00339 ; rdf:subject ?pfs57 ; rdf:predicate up:annotation ; rdf:object ?annotation58 . _:135634 a rdf:Statement ; up:attribution _:135587 ; rdf:subject ?pfs57 ; rdf:predicate up:annotation ; rdf:object ?annotation58 . _:135635 a rdf:Statement ; up:source unirule:MF_00339 ; rdf:subject ?pfs64 ; rdf:predicate up:annotation ; rdf:object ?annotation65 . _:135636 a rdf:Statement ; up:attribution _:135588 ; rdf:subject ?pfs64 ; rdf:predicate up:annotation ; rdf:object ?annotation65 . _:135637 a rdf:Statement ; up:source unirule:MF_00339 ; rdf:subject ?pfs71 ; rdf:predicate up:annotation ; rdf:object ?annotation72 . _:135638 a rdf:Statement ; up:attribution _:135589 ; rdf:subject ?pfs71 ; rdf:predicate up:annotation ; rdf:object ?annotation72 . _:135639 a rdf:Statement ; up:source unirule:MF_00339 ; rdf:subject ?pfs79 ; rdf:predicate up:annotation ; rdf:object ?annotation80 . _:135640 a rdf:Statement ; up:attribution _:135590 ; rdf:subject ?pfs79 ; rdf:predicate up:annotation ; rdf:object ?annotation80 . _:135641 a rdf:Statement ; up:source unirule:MF_00339 ; rdf:subject ?pfs85 ; rdf:predicate up:annotation ; rdf:object ?annotation86 . _:135642 a rdf:Statement ; up:attribution _:135591 ; rdf:subject ?pfs85 ; rdf:predicate up:annotation ; rdf:object ?annotation86 . _:135643 a rdf:Statement ; up:source unirule:MF_00339 ; rdf:subject ?pfs92 ; rdf:predicate up:annotation ; rdf:object ?annotation93 . _:135644 a rdf:Statement ; up:attribution _:135592 ; rdf:subject ?pfs92 ; rdf:predicate up:annotation ; rdf:object ?annotation93 . _:135645 a rdf:Statement ; up:source unirule:MF_00339 ; rdf:subject ?pfs99 ; rdf:predicate up:annotation ; rdf:object ?annotation100 . _:135646 a rdf:Statement ; up:attribution _:135593 ; rdf:subject ?pfs99 ; rdf:predicate up:annotation ; rdf:object ?annotation100 . _:135647 a rdf:Statement ; up:source unirule:MF_00339 ; rdf:subject ?pfs106 ; rdf:predicate up:annotation ; rdf:object ?annotation107 . _:135648 a rdf:Statement ; up:attribution _:135594 ; rdf:subject ?pfs106 ; rdf:predicate up:annotation ; rdf:object ?annotation107 . _:135649 a rdf:Statement ; up:source unirule:MF_00339 ; rdf:subject ?pfs114 ; rdf:predicate up:annotation ; rdf:object ?annotation115 . _:135650 a rdf:Statement ; up:attribution _:135595 ; rdf:subject ?pfs114 ; rdf:predicate up:annotation ; rdf:object ?annotation115 . _:135651 a rdf:Statement ; up:source unirule:MF_00339 ; rdf:subject ?pfs121 ; rdf:predicate up:annotation ; rdf:object ?annotation122 . _:135652 a rdf:Statement ; up:attribution _:135596 ; rdf:subject ?pfs121 ; rdf:predicate up:annotation ; rdf:object ?annotation122 . _:135653 a rdf:Statement ; up:source unirule:MF_00339 ; rdf:subject ?pfs129 ; rdf:predicate up:annotation ; rdf:object ?annotation130 . _:135654 a rdf:Statement ; up:attribution _:135597 ; rdf:subject ?pfs129 ; rdf:predicate up:annotation ; rdf:object ?annotation130 . } WHERE { #baseURI: http://purl.uniprot.org/unirule/MF_00339 #Rule MF_00339 Created by:hamap on:2001-06-01 Modified by:ecastro on:2023-06-01 ?this up:organism ?thisOrganism ; rdfs:seeAlso signature:MF_00339 . ?thisOrganism rdfs:subClassOf+ taxon:2 . BIND(URI(CONCAT(STR(?this), '#MF_00339a0')) AS ?name0) . BIND(URI(CONCAT(STR(?this), '#MF_00339a1')) AS ?name1) . BIND(URI(CONCAT(STR(?this), '#MF_00339a3')) AS ?annotation3) . BIND(URI(CONCAT(STR(?this), '#MF_00339a4')) AS ?annotation4) . BIND(URI(CONCAT(STR(?this), '#MF_00339a6')) AS ?annotation6) . BIND(URI(CONCAT(STR(?this), '#MF_00339a7')) AS ?annotation7) . BIND(URI(CONCAT(STR(?this), '#MF_00339a8')) AS ?annotation8) . BIND(URI(CONCAT(STR(?this), '#MF_00339a9')) AS ?annotation9) . BIND(URI(CONCAT(STR(?this), '#MF_00339a10')) AS ?annotation10) . BIND(URI(CONCAT(STR(?this), '#MF_00339a12')) AS ?annotation12) . OPTIONAL { ?this up:sequence ?thisSequence . ?thisSequence rdf:value ?thisSequenceValue . ?templateMotifMatch141 faldo:location ?templateMotifSequenceMatchRegionP0A796142 ; edam:is_output_of ?templateMotifSequenceProfileAlignmentOperationP0A796144 ; rdf:type edam:data_0869 ; rdf:value ?templateMotifCigarP0A796MF_00339137 . ?templateMotifSequenceMatchRegionP0A796142 faldo:begin ?templateMotifSequenceMatchBeginP0A796143 . ?templateMotifSequenceMatchBeginP0A796143 faldo:position ?templateMotifSequenceMatchBeginPositionP0A796138 ; faldo:reference isoform:P0A796-1 . ?templateMotifSequenceProfileAlignmentOperationP0A796144 edam:has_input signature:MF_00339 ; rdf:type edam:operation_0300 . ?targetMotifMatch145 faldo:location ?targetMotifMatchRegionMatch146 ; edam:is_output_of ?targetMotifSequenceAlignmentOperationMF_00339148 ; rdf:type edam:data_0869 ; rdf:value ?targetMotifMatchCigarP0A796MF_00339139 . ?targetMotifMatchRegionMatch146 faldo:begin ?targetMotifMatchRegionMatchBeginMF_00339147 . ?targetMotifMatchRegionMatchBeginMF_00339147 faldo:position ?targetMotifMatchRegionMatchBeginPositionMF_00339140 ; faldo:reference ?thisSequence . ?targetMotifSequenceAlignmentOperationMF_00339148 edam:has_input signature:MF_00339 ; rdf:type edam:operation_0300 . BIND(STRLEN(REPLACE(SUBSTR(?templateMotifCigarP0A796MF_00339137, 1, (STRLEN(?templateMotifCigarP0A796MF_00339137) - STRLEN(REPLACE(?templateMotifCigarP0A796MF_00339137, CONCAT('^(?:-*[^-]){', STR(((73 - ?templateMotifSequenceMatchBeginPositionP0A796138) + 1)), '}'), '')))), '[a-z]', '')) AS ?step1149) . BIND((STRLEN(SUBSTR(?targetMotifMatchCigarP0A796MF_00339139, 1, (STRLEN(?targetMotifMatchCigarP0A796MF_00339139) - STRLEN(REPLACE(?targetMotifMatchCigarP0A796MF_00339139, CONCAT('^(?:[a-z]*(?:[A-Z]|-)){', STR(?step1149), '}'), ''))))) - STRLEN(REPLACE(SUBSTR(?targetMotifMatchCigarP0A796MF_00339139, 1, (STRLEN(?targetMotifMatchCigarP0A796MF_00339139) - STRLEN(REPLACE(?targetMotifMatchCigarP0A796MF_00339139, CONCAT('^(?:[a-z]*(?:[A-Z]|-)){', STR(?step1149), '}'), '')))), '[^-]', ''))) AS ?step2150) . BIND(((?step2150 + ?targetMotifMatchRegionMatchBeginPositionMF_00339140) - 1) AS ?thisPositionOn18) . BIND(STRLEN(REPLACE(SUBSTR(?templateMotifCigarP0A796MF_00339137, 1, (STRLEN(?templateMotifCigarP0A796MF_00339137) - STRLEN(REPLACE(?templateMotifCigarP0A796MF_00339137, CONCAT('^(?:-*[^-]){', STR(((74 - ?templateMotifSequenceMatchBeginPositionP0A796138) + 1)), '}'), '')))), '[a-z]', '')) AS ?step1151) . BIND((STRLEN(SUBSTR(?targetMotifMatchCigarP0A796MF_00339139, 1, (STRLEN(?targetMotifMatchCigarP0A796MF_00339139) - STRLEN(REPLACE(?targetMotifMatchCigarP0A796MF_00339139, CONCAT('^(?:[a-z]*(?:[A-Z]|-)){', STR(?step1151), '}'), ''))))) - STRLEN(REPLACE(SUBSTR(?targetMotifMatchCigarP0A796MF_00339139, 1, (STRLEN(?targetMotifMatchCigarP0A796MF_00339139) - STRLEN(REPLACE(?targetMotifMatchCigarP0A796MF_00339139, CONCAT('^(?:[a-z]*(?:[A-Z]|-)){', STR(?step1151), '}'), '')))), '[^-]', ''))) AS ?step2152) . BIND(((?step2152 + ?targetMotifMatchRegionMatchBeginPositionMF_00339140) - 1) AS ?thisPositionOn19) . BIND(?this AS ?pfs1t153) . BIND(URI(CONCAT(STR(?thisSequence), '#position', STR(?thisPositionOn18))) AS ?pfsb15) . BIND(URI(CONCAT(STR(?thisSequence), '#position', STR(?thisPositionOn19))) AS ?pfse16) . FILTER (REGEX('R[ARNDCQEGHILKMFPSTWYVBZJUOX]', SUBSTR(?thisSequenceValue, ?thisPositionOn18, (?thisPositionOn19 - ?thisPositionOn18)))) . BIND(URI(CONCAT(STR(?this), '#MF_00339a14')) AS ?annotation14) . BIND(?this AS ?pfs13) . } OPTIONAL { ?this up:sequence ?thisSequence . ?thisSequence rdf:value ?thisSequenceValue . ?templateMotifMatch158 faldo:location ?templateMotifSequenceMatchRegionP0A796159 ; edam:is_output_of ?templateMotifSequenceProfileAlignmentOperationP0A796161 ; rdf:type edam:data_0869 ; rdf:value ?templateMotifCigarP0A796MF_00339154 . ?templateMotifSequenceMatchRegionP0A796159 faldo:begin ?templateMotifSequenceMatchBeginP0A796160 . ?templateMotifSequenceMatchBeginP0A796160 faldo:position ?templateMotifSequenceMatchBeginPositionP0A796155 ; faldo:reference isoform:P0A796-1 . ?templateMotifSequenceProfileAlignmentOperationP0A796161 edam:has_input signature:MF_00339 ; rdf:type edam:operation_0300 . ?targetMotifMatch162 faldo:location ?targetMotifMatchRegionMatch163 ; edam:is_output_of ?targetMotifSequenceAlignmentOperationMF_00339165 ; rdf:type edam:data_0869 ; rdf:value ?targetMotifMatchCigarP0A796MF_00339156 . ?targetMotifMatchRegionMatch163 faldo:begin ?targetMotifMatchRegionMatchBeginMF_00339164 . ?targetMotifMatchRegionMatchBeginMF_00339164 faldo:position ?targetMotifMatchRegionMatchBeginPositionMF_00339157 ; faldo:reference ?thisSequence . ?targetMotifSequenceAlignmentOperationMF_00339165 edam:has_input signature:MF_00339 ; rdf:type edam:operation_0300 . BIND(STRLEN(REPLACE(SUBSTR(?templateMotifCigarP0A796MF_00339154, 1, (STRLEN(?templateMotifCigarP0A796MF_00339154) - STRLEN(REPLACE(?templateMotifCigarP0A796MF_00339154, CONCAT('^(?:-*[^-]){', STR(((103 - ?templateMotifSequenceMatchBeginPositionP0A796155) + 1)), '}'), '')))), '[a-z]', '')) AS ?step1166) . BIND((STRLEN(SUBSTR(?targetMotifMatchCigarP0A796MF_00339156, 1, (STRLEN(?targetMotifMatchCigarP0A796MF_00339156) - STRLEN(REPLACE(?targetMotifMatchCigarP0A796MF_00339156, CONCAT('^(?:[a-z]*(?:[A-Z]|-)){', STR(?step1166), '}'), ''))))) - STRLEN(REPLACE(SUBSTR(?targetMotifMatchCigarP0A796MF_00339156, 1, (STRLEN(?targetMotifMatchCigarP0A796MF_00339156) - STRLEN(REPLACE(?targetMotifMatchCigarP0A796MF_00339156, CONCAT('^(?:[a-z]*(?:[A-Z]|-)){', STR(?step1166), '}'), '')))), '[^-]', ''))) AS ?step2167) . BIND(((?step2167 + ?targetMotifMatchRegionMatchBeginPositionMF_00339157) - 1) AS ?thisPositionOn25) . BIND(STRLEN(REPLACE(SUBSTR(?templateMotifCigarP0A796MF_00339154, 1, (STRLEN(?templateMotifCigarP0A796MF_00339154) - STRLEN(REPLACE(?templateMotifCigarP0A796MF_00339154, CONCAT('^(?:-*[^-]){', STR(((106 - ?templateMotifSequenceMatchBeginPositionP0A796155) + 1)), '}'), '')))), '[a-z]', '')) AS ?step1168) . BIND((STRLEN(SUBSTR(?targetMotifMatchCigarP0A796MF_00339156, 1, (STRLEN(?targetMotifMatchCigarP0A796MF_00339156) - STRLEN(REPLACE(?targetMotifMatchCigarP0A796MF_00339156, CONCAT('^(?:[a-z]*(?:[A-Z]|-)){', STR(?step1168), '}'), ''))))) - STRLEN(REPLACE(SUBSTR(?targetMotifMatchCigarP0A796MF_00339156, 1, (STRLEN(?targetMotifMatchCigarP0A796MF_00339156) - STRLEN(REPLACE(?targetMotifMatchCigarP0A796MF_00339156, CONCAT('^(?:[a-z]*(?:[A-Z]|-)){', STR(?step1168), '}'), '')))), '[^-]', ''))) AS ?step2169) . BIND(((?step2169 + ?targetMotifMatchRegionMatchBeginPositionMF_00339157) - 1) AS ?thisPositionOn26) . BIND(?this AS ?pfs1t170) . BIND(URI(CONCAT(STR(?thisSequence), '#position', STR(?thisPositionOn25))) AS ?pfsb22) . BIND(URI(CONCAT(STR(?thisSequence), '#position', STR(?thisPositionOn26))) AS ?pfse23) . FILTER (REGEX('G[DEN]G[ST]', SUBSTR(?thisSequenceValue, ?thisPositionOn25, (?thisPositionOn26 - ?thisPositionOn25)))) . BIND(URI(CONCAT(STR(?this), '#MF_00339a21')) AS ?annotation21) . BIND(?this AS ?pfs20) . } OPTIONAL { ?this up:sequence ?thisSequence . ?thisSequence rdf:value ?thisSequenceValue . ?templateMotifMatch175 faldo:location ?templateMotifSequenceMatchRegionP0A796176 ; edam:is_output_of ?templateMotifSequenceProfileAlignmentOperationP0A796178 ; rdf:type edam:data_0869 ; rdf:value ?templateMotifCigarP0A796MF_00339171 . ?templateMotifSequenceMatchRegionP0A796176 faldo:begin ?templateMotifSequenceMatchBeginP0A796177 . ?templateMotifSequenceMatchBeginP0A796177 faldo:position ?templateMotifSequenceMatchBeginPositionP0A796172 ; faldo:reference isoform:P0A796-1 . ?templateMotifSequenceProfileAlignmentOperationP0A796178 edam:has_input signature:MF_00339 ; rdf:type edam:operation_0300 . ?targetMotifMatch179 faldo:location ?targetMotifMatchRegionMatch180 ; edam:is_output_of ?targetMotifSequenceAlignmentOperationMF_00339182 ; rdf:type edam:data_0869 ; rdf:value ?targetMotifMatchCigarP0A796MF_00339173 . ?targetMotifMatchRegionMatch180 faldo:begin ?targetMotifMatchRegionMatchBeginMF_00339181 . ?targetMotifMatchRegionMatchBeginMF_00339181 faldo:position ?targetMotifMatchRegionMatchBeginPositionMF_00339174 ; faldo:reference ?thisSequence . ?targetMotifSequenceAlignmentOperationMF_00339182 edam:has_input signature:MF_00339 ; rdf:type edam:operation_0300 . BIND(STRLEN(REPLACE(SUBSTR(?templateMotifCigarP0A796MF_00339171, 1, (STRLEN(?templateMotifCigarP0A796MF_00339171) - STRLEN(REPLACE(?templateMotifCigarP0A796MF_00339171, CONCAT('^(?:-*[^-]){', STR(((22 - ?templateMotifSequenceMatchBeginPositionP0A796172) + 1)), '}'), '')))), '[a-z]', '')) AS ?step1183) . BIND((STRLEN(SUBSTR(?targetMotifMatchCigarP0A796MF_00339173, 1, (STRLEN(?targetMotifMatchCigarP0A796MF_00339173) - STRLEN(REPLACE(?targetMotifMatchCigarP0A796MF_00339173, CONCAT('^(?:[a-z]*(?:[A-Z]|-)){', STR(?step1183), '}'), ''))))) - STRLEN(REPLACE(SUBSTR(?targetMotifMatchCigarP0A796MF_00339173, 1, (STRLEN(?targetMotifMatchCigarP0A796MF_00339173) - STRLEN(REPLACE(?targetMotifMatchCigarP0A796MF_00339173, CONCAT('^(?:[a-z]*(?:[A-Z]|-)){', STR(?step1183), '}'), '')))), '[^-]', ''))) AS ?step2184) . BIND(((?step2184 + ?targetMotifMatchRegionMatchBeginPositionMF_00339174) - 1) AS ?thisPositionOn32) . BIND(STRLEN(REPLACE(SUBSTR(?templateMotifCigarP0A796MF_00339171, 1, (STRLEN(?templateMotifCigarP0A796MF_00339171) - STRLEN(REPLACE(?templateMotifCigarP0A796MF_00339171, CONCAT('^(?:-*[^-]){', STR(((26 - ?templateMotifSequenceMatchBeginPositionP0A796172) + 1)), '}'), '')))), '[a-z]', '')) AS ?step1185) . BIND((STRLEN(SUBSTR(?targetMotifMatchCigarP0A796MF_00339173, 1, (STRLEN(?targetMotifMatchCigarP0A796MF_00339173) - STRLEN(REPLACE(?targetMotifMatchCigarP0A796MF_00339173, CONCAT('^(?:[a-z]*(?:[A-Z]|-)){', STR(?step1185), '}'), ''))))) - STRLEN(REPLACE(SUBSTR(?targetMotifMatchCigarP0A796MF_00339173, 1, (STRLEN(?targetMotifMatchCigarP0A796MF_00339173) - STRLEN(REPLACE(?targetMotifMatchCigarP0A796MF_00339173, CONCAT('^(?:[a-z]*(?:[A-Z]|-)){', STR(?step1185), '}'), '')))), '[^-]', ''))) AS ?step2186) . BIND(((?step2186 + ?targetMotifMatchRegionMatchBeginPositionMF_00339174) - 1) AS ?thisPositionOn33) . BIND(?this AS ?pfs1t187) . BIND(URI(CONCAT(STR(?thisSequence), '#position', STR(?thisPositionOn32))) AS ?pfsb29) . BIND(URI(CONCAT(STR(?thisSequence), '#position', STR(?thisPositionOn33))) AS ?pfse30) . FILTER (REGEX('R[ARNDCQEGHILKMFPSTWYVBZJUOX]{3)[RK]', SUBSTR(?thisSequenceValue, ?thisPositionOn32, (?thisPositionOn33 - ?thisPositionOn32)))) . BIND(URI(CONCAT(STR(?this), '#MF_00339a28')) AS ?annotation28) . BIND(?this AS ?pfs27) . } OPTIONAL { ?this up:sequence ?thisSequence . ?thisSequence rdf:value ?thisSequenceValue . ?templateMotifMatch192 faldo:location ?templateMotifSequenceMatchRegionP0A796193 ; edam:is_output_of ?templateMotifSequenceProfileAlignmentOperationP0A796195 ; rdf:type edam:data_0869 ; rdf:value ?templateMotifCigarP0A796MF_00339188 . ?templateMotifSequenceMatchRegionP0A796193 faldo:begin ?templateMotifSequenceMatchBeginP0A796194 . ?templateMotifSequenceMatchBeginP0A796194 faldo:position ?templateMotifSequenceMatchBeginPositionP0A796189 ; faldo:reference isoform:P0A796-1 . ?templateMotifSequenceProfileAlignmentOperationP0A796195 edam:has_input signature:MF_00339 ; rdf:type edam:operation_0300 . ?targetMotifMatch196 faldo:location ?targetMotifMatchRegionMatch197 ; edam:is_output_of ?targetMotifSequenceAlignmentOperationMF_00339199 ; rdf:type edam:data_0869 ; rdf:value ?targetMotifMatchCigarP0A796MF_00339190 . ?targetMotifMatchRegionMatch197 faldo:begin ?targetMotifMatchRegionMatchBeginMF_00339198 . ?targetMotifMatchRegionMatchBeginMF_00339198 faldo:position ?targetMotifMatchRegionMatchBeginPositionMF_00339191 ; faldo:reference ?thisSequence . ?targetMotifSequenceAlignmentOperationMF_00339199 edam:has_input signature:MF_00339 ; rdf:type edam:operation_0300 . BIND(STRLEN(REPLACE(SUBSTR(?templateMotifCigarP0A796MF_00339188, 1, (STRLEN(?templateMotifCigarP0A796MF_00339188) - STRLEN(REPLACE(?templateMotifCigarP0A796MF_00339188, CONCAT('^(?:-*[^-]){', STR(((55 - ?templateMotifSequenceMatchBeginPositionP0A796189) + 1)), '}'), '')))), '[a-z]', '')) AS ?step1200) . BIND((STRLEN(SUBSTR(?targetMotifMatchCigarP0A796MF_00339190, 1, (STRLEN(?targetMotifMatchCigarP0A796MF_00339190) - STRLEN(REPLACE(?targetMotifMatchCigarP0A796MF_00339190, CONCAT('^(?:[a-z]*(?:[A-Z]|-)){', STR(?step1200), '}'), ''))))) - STRLEN(REPLACE(SUBSTR(?targetMotifMatchCigarP0A796MF_00339190, 1, (STRLEN(?targetMotifMatchCigarP0A796MF_00339190) - STRLEN(REPLACE(?targetMotifMatchCigarP0A796MF_00339190, CONCAT('^(?:[a-z]*(?:[A-Z]|-)){', STR(?step1200), '}'), '')))), '[^-]', ''))) AS ?step2201) . BIND(((?step2201 + ?targetMotifMatchRegionMatchBeginPositionMF_00339191) - 1) AS ?thisPositionOn39) . BIND(STRLEN(REPLACE(SUBSTR(?templateMotifCigarP0A796MF_00339188, 1, (STRLEN(?templateMotifCigarP0A796MF_00339188) - STRLEN(REPLACE(?templateMotifCigarP0A796MF_00339188, CONCAT('^(?:-*[^-]){', STR(((60 - ?templateMotifSequenceMatchBeginPositionP0A796189) + 1)), '}'), '')))), '[a-z]', '')) AS ?step1202) . BIND((STRLEN(SUBSTR(?targetMotifMatchCigarP0A796MF_00339190, 1, (STRLEN(?targetMotifMatchCigarP0A796MF_00339190) - STRLEN(REPLACE(?targetMotifMatchCigarP0A796MF_00339190, CONCAT('^(?:[a-z]*(?:[A-Z]|-)){', STR(?step1202), '}'), ''))))) - STRLEN(REPLACE(SUBSTR(?targetMotifMatchCigarP0A796MF_00339190, 1, (STRLEN(?targetMotifMatchCigarP0A796MF_00339190) - STRLEN(REPLACE(?targetMotifMatchCigarP0A796MF_00339190, CONCAT('^(?:[a-z]*(?:[A-Z]|-)){', STR(?step1202), '}'), '')))), '[^-]', ''))) AS ?step2203) . BIND(((?step2203 + ?targetMotifMatchRegionMatchBeginPositionMF_00339191) - 1) AS ?thisPositionOn40) . BIND(?this AS ?pfs1t204) . BIND(URI(CONCAT(STR(?thisSequence), '#position', STR(?thisPositionOn39))) AS ?pfsb36) . BIND(URI(CONCAT(STR(?thisSequence), '#position', STR(?thisPositionOn40))) AS ?pfse37) . FILTER (REGEX('RY[ARNDCQEGHILKMFPSTWYVBZJUOX]{2)S[DE]', SUBSTR(?thisSequenceValue, ?thisPositionOn39, (?thisPositionOn40 - ?thisPositionOn39)))) . BIND(URI(CONCAT(STR(?this), '#MF_00339a35')) AS ?annotation35) . BIND(?this AS ?pfs34) . } OPTIONAL { ?this up:sequence ?thisSequence . ?thisSequence rdf:value ?thisSequenceValue . ?templateMotifMatch209 faldo:location ?templateMotifSequenceMatchRegionP0A796210 ; edam:is_output_of ?templateMotifSequenceProfileAlignmentOperationP0A796212 ; rdf:type edam:data_0869 ; rdf:value ?templateMotifCigarP0A796MF_00339205 . ?templateMotifSequenceMatchRegionP0A796210 faldo:begin ?templateMotifSequenceMatchBeginP0A796211 . ?templateMotifSequenceMatchBeginP0A796211 faldo:position ?templateMotifSequenceMatchBeginPositionP0A796206 ; faldo:reference isoform:P0A796-1 . ?templateMotifSequenceProfileAlignmentOperationP0A796212 edam:has_input signature:MF_00339 ; rdf:type edam:operation_0300 . ?targetMotifMatch213 faldo:location ?targetMotifMatchRegionMatch214 ; edam:is_output_of ?targetMotifSequenceAlignmentOperationMF_00339216 ; rdf:type edam:data_0869 ; rdf:value ?targetMotifMatchCigarP0A796MF_00339207 . ?targetMotifMatchRegionMatch214 faldo:begin ?targetMotifMatchRegionMatchBeginMF_00339215 . ?targetMotifMatchRegionMatchBeginMF_00339215 faldo:position ?targetMotifMatchRegionMatchBeginPositionMF_00339208 ; faldo:reference ?thisSequence . ?targetMotifSequenceAlignmentOperationMF_00339216 edam:has_input signature:MF_00339 ; rdf:type edam:operation_0300 . BIND(STRLEN(REPLACE(SUBSTR(?templateMotifCigarP0A796MF_00339205, 1, (STRLEN(?templateMotifCigarP0A796MF_00339205) - STRLEN(REPLACE(?templateMotifCigarP0A796MF_00339205, CONCAT('^(?:-*[^-]){', STR(((126 - ?templateMotifSequenceMatchBeginPositionP0A796206) + 1)), '}'), '')))), '[a-z]', '')) AS ?step1217) . BIND((STRLEN(SUBSTR(?targetMotifMatchCigarP0A796MF_00339207, 1, (STRLEN(?targetMotifMatchCigarP0A796MF_00339207) - STRLEN(REPLACE(?targetMotifMatchCigarP0A796MF_00339207, CONCAT('^(?:[a-z]*(?:[A-Z]|-)){', STR(?step1217), '}'), ''))))) - STRLEN(REPLACE(SUBSTR(?targetMotifMatchCigarP0A796MF_00339207, 1, (STRLEN(?targetMotifMatchCigarP0A796MF_00339207) - STRLEN(REPLACE(?targetMotifMatchCigarP0A796MF_00339207, CONCAT('^(?:[a-z]*(?:[A-Z]|-)){', STR(?step1217), '}'), '')))), '[^-]', ''))) AS ?step2218) . BIND(((?step2218 + ?targetMotifMatchRegionMatchBeginPositionMF_00339208) - 1) AS ?thisPositionOn47) . BIND(STRLEN(REPLACE(SUBSTR(?templateMotifCigarP0A796MF_00339205, 1, (STRLEN(?templateMotifCigarP0A796MF_00339205) - STRLEN(REPLACE(?templateMotifCigarP0A796MF_00339205, CONCAT('^(?:-*[^-]){', STR(((128 - ?templateMotifSequenceMatchBeginPositionP0A796206) + 1)), '}'), '')))), '[a-z]', '')) AS ?step1219) . BIND((STRLEN(SUBSTR(?targetMotifMatchCigarP0A796MF_00339207, 1, (STRLEN(?targetMotifMatchCigarP0A796MF_00339207) - STRLEN(REPLACE(?targetMotifMatchCigarP0A796MF_00339207, CONCAT('^(?:[a-z]*(?:[A-Z]|-)){', STR(?step1219), '}'), ''))))) - STRLEN(REPLACE(SUBSTR(?targetMotifMatchCigarP0A796MF_00339207, 1, (STRLEN(?targetMotifMatchCigarP0A796MF_00339207) - STRLEN(REPLACE(?targetMotifMatchCigarP0A796MF_00339207, CONCAT('^(?:[a-z]*(?:[A-Z]|-)){', STR(?step1219), '}'), '')))), '[^-]', ''))) AS ?step2220) . BIND(((?step2220 + ?targetMotifMatchRegionMatchBeginPositionMF_00339208) - 1) AS ?thisPositionOn48) . BIND(?this AS ?pfs1t221) . BIND(URI(CONCAT(STR(?thisSequence), '#position', STR(?thisPositionOn47))) AS ?pfsb43) . BIND(URI(CONCAT(STR(?thisSequence), '#position', STR(?thisPositionOn48))) AS ?pfse44) . FILTER (REGEX('[TS][ARNDCQEGHILKMFPSTWYVBZJUOX]D', SUBSTR(?thisSequenceValue, ?thisPositionOn47, (?thisPositionOn48 - ?thisPositionOn47)))) . BIND(URI(CONCAT(STR(?this), '#MF_00339a42')) AS ?annotation42) . BIND(?this AS ?pfs41) . } OPTIONAL { ?this up:sequence ?thisSequence . ?thisSequence rdf:value ?thisSequenceValue . ?templateMotifMatch226 faldo:location ?templateMotifSequenceMatchRegionP0A796227 ; edam:is_output_of ?templateMotifSequenceProfileAlignmentOperationP0A796229 ; rdf:type edam:data_0869 ; rdf:value ?templateMotifCigarP0A796MF_00339222 . ?templateMotifSequenceMatchRegionP0A796227 faldo:begin ?templateMotifSequenceMatchBeginP0A796228 . ?templateMotifSequenceMatchBeginP0A796228 faldo:position ?templateMotifSequenceMatchBeginPositionP0A796223 ; faldo:reference isoform:P0A796-1 . ?templateMotifSequenceProfileAlignmentOperationP0A796229 edam:has_input signature:MF_00339 ; rdf:type edam:operation_0300 . ?targetMotifMatch230 faldo:location ?targetMotifMatchRegionMatch231 ; edam:is_output_of ?targetMotifSequenceAlignmentOperationMF_00339233 ; rdf:type edam:data_0869 ; rdf:value ?targetMotifMatchCigarP0A796MF_00339224 . ?targetMotifMatchRegionMatch231 faldo:begin ?targetMotifMatchRegionMatchBeginMF_00339232 . ?targetMotifMatchRegionMatchBeginMF_00339232 faldo:position ?targetMotifMatchRegionMatchBeginPositionMF_00339225 ; faldo:reference ?thisSequence . ?targetMotifSequenceAlignmentOperationMF_00339233 edam:has_input signature:MF_00339 ; rdf:type edam:operation_0300 . BIND(STRLEN(REPLACE(SUBSTR(?templateMotifCigarP0A796MF_00339222, 1, (STRLEN(?templateMotifCigarP0A796MF_00339222) - STRLEN(REPLACE(?templateMotifCigarP0A796MF_00339222, CONCAT('^(?:-*[^-]){', STR(((170 - ?templateMotifSequenceMatchBeginPositionP0A796223) + 1)), '}'), '')))), '[a-z]', '')) AS ?step1234) . BIND((STRLEN(SUBSTR(?targetMotifMatchCigarP0A796MF_00339224, 1, (STRLEN(?targetMotifMatchCigarP0A796MF_00339224) - STRLEN(REPLACE(?targetMotifMatchCigarP0A796MF_00339224, CONCAT('^(?:[a-z]*(?:[A-Z]|-)){', STR(?step1234), '}'), ''))))) - STRLEN(REPLACE(SUBSTR(?targetMotifMatchCigarP0A796MF_00339224, 1, (STRLEN(?targetMotifMatchCigarP0A796MF_00339224) - STRLEN(REPLACE(?targetMotifMatchCigarP0A796MF_00339224, CONCAT('^(?:[a-z]*(?:[A-Z]|-)){', STR(?step1234), '}'), '')))), '[^-]', ''))) AS ?step2235) . BIND(((?step2235 + ?targetMotifMatchRegionMatchBeginPositionMF_00339225) - 1) AS ?thisPositionOn55) . BIND(STRLEN(REPLACE(SUBSTR(?templateMotifCigarP0A796MF_00339222, 1, (STRLEN(?templateMotifCigarP0A796MF_00339222) - STRLEN(REPLACE(?templateMotifCigarP0A796MF_00339222, CONCAT('^(?:-*[^-]){', STR(((172 - ?templateMotifSequenceMatchBeginPositionP0A796223) + 1)), '}'), '')))), '[a-z]', '')) AS ?step1236) . BIND((STRLEN(SUBSTR(?targetMotifMatchCigarP0A796MF_00339224, 1, (STRLEN(?targetMotifMatchCigarP0A796MF_00339224) - STRLEN(REPLACE(?targetMotifMatchCigarP0A796MF_00339224, CONCAT('^(?:[a-z]*(?:[A-Z]|-)){', STR(?step1236), '}'), ''))))) - STRLEN(REPLACE(SUBSTR(?targetMotifMatchCigarP0A796MF_00339224, 1, (STRLEN(?targetMotifMatchCigarP0A796MF_00339224) - STRLEN(REPLACE(?targetMotifMatchCigarP0A796MF_00339224, CONCAT('^(?:[a-z]*(?:[A-Z]|-)){', STR(?step1236), '}'), '')))), '[^-]', ''))) AS ?step2237) . BIND(((?step2237 + ?targetMotifMatchRegionMatchBeginPositionMF_00339225) - 1) AS ?thisPositionOn56) . BIND(?this AS ?pfs1t238) . BIND(URI(CONCAT(STR(?thisSequence), '#position', STR(?thisPositionOn55))) AS ?pfsb51) . BIND(URI(CONCAT(STR(?thisSequence), '#position', STR(?thisPositionOn56))) AS ?pfse52) . FILTER (REGEX('MG[RHN]', SUBSTR(?thisSequenceValue, ?thisPositionOn55, (?thisPositionOn56 - ?thisPositionOn55)))) . BIND(URI(CONCAT(STR(?this), '#MF_00339a50')) AS ?annotation50) . BIND(?this AS ?pfs49) . } OPTIONAL { ?this up:sequence ?thisSequence . ?thisSequence rdf:value ?thisSequenceValue . ?templateMotifMatch243 faldo:location ?templateMotifSequenceMatchRegionP0A796244 ; edam:is_output_of ?templateMotifSequenceProfileAlignmentOperationP0A796246 ; rdf:type edam:data_0869 ; rdf:value ?templateMotifCigarP0A796MF_00339239 . ?templateMotifSequenceMatchRegionP0A796244 faldo:begin ?templateMotifSequenceMatchBeginP0A796245 . ?templateMotifSequenceMatchBeginP0A796245 faldo:position ?templateMotifSequenceMatchBeginPositionP0A796240 ; faldo:reference isoform:P0A796-1 . ?templateMotifSequenceProfileAlignmentOperationP0A796246 edam:has_input signature:MF_00339 ; rdf:type edam:operation_0300 . ?targetMotifMatch247 faldo:location ?targetMotifMatchRegionMatch248 ; edam:is_output_of ?targetMotifSequenceAlignmentOperationMF_00339250 ; rdf:type edam:data_0869 ; rdf:value ?targetMotifMatchCigarP0A796MF_00339241 . ?targetMotifMatchRegionMatch248 faldo:begin ?targetMotifMatchRegionMatchBeginMF_00339249 . ?targetMotifMatchRegionMatchBeginMF_00339249 faldo:position ?targetMotifMatchRegionMatchBeginPositionMF_00339242 ; faldo:reference ?thisSequence . ?targetMotifSequenceAlignmentOperationMF_00339250 edam:has_input signature:MF_00339 ; rdf:type edam:operation_0300 . BIND(STRLEN(REPLACE(SUBSTR(?templateMotifCigarP0A796MF_00339239, 1, (STRLEN(?templateMotifCigarP0A796MF_00339239) - STRLEN(REPLACE(?templateMotifCigarP0A796MF_00339239, CONCAT('^(?:-*[^-]){', STR(((186 - ?templateMotifSequenceMatchBeginPositionP0A796240) + 1)), '}'), '')))), '[a-z]', '')) AS ?step1251) . BIND((STRLEN(SUBSTR(?targetMotifMatchCigarP0A796MF_00339241, 1, (STRLEN(?targetMotifMatchCigarP0A796MF_00339241) - STRLEN(REPLACE(?targetMotifMatchCigarP0A796MF_00339241, CONCAT('^(?:[a-z]*(?:[A-Z]|-)){', STR(?step1251), '}'), ''))))) - STRLEN(REPLACE(SUBSTR(?targetMotifMatchCigarP0A796MF_00339241, 1, (STRLEN(?targetMotifMatchCigarP0A796MF_00339241) - STRLEN(REPLACE(?targetMotifMatchCigarP0A796MF_00339241, CONCAT('^(?:[a-z]*(?:[A-Z]|-)){', STR(?step1251), '}'), '')))), '[^-]', ''))) AS ?step2252) . BIND(((?step2252 + ?targetMotifMatchRegionMatchBeginPositionMF_00339242) - 1) AS ?thisPositionOn62) . BIND(STRLEN(REPLACE(SUBSTR(?templateMotifCigarP0A796MF_00339239, 1, (STRLEN(?templateMotifCigarP0A796MF_00339239) - STRLEN(REPLACE(?templateMotifCigarP0A796MF_00339239, CONCAT('^(?:-*[^-]){', STR(((188 - ?templateMotifSequenceMatchBeginPositionP0A796240) + 1)), '}'), '')))), '[a-z]', '')) AS ?step1253) . BIND((STRLEN(SUBSTR(?targetMotifMatchCigarP0A796MF_00339241, 1, (STRLEN(?targetMotifMatchCigarP0A796MF_00339241) - STRLEN(REPLACE(?targetMotifMatchCigarP0A796MF_00339241, CONCAT('^(?:[a-z]*(?:[A-Z]|-)){', STR(?step1253), '}'), ''))))) - STRLEN(REPLACE(SUBSTR(?targetMotifMatchCigarP0A796MF_00339241, 1, (STRLEN(?targetMotifMatchCigarP0A796MF_00339241) - STRLEN(REPLACE(?targetMotifMatchCigarP0A796MF_00339241, CONCAT('^(?:[a-z]*(?:[A-Z]|-)){', STR(?step1253), '}'), '')))), '[^-]', ''))) AS ?step2254) . BIND(((?step2254 + ?targetMotifMatchRegionMatchBeginPositionMF_00339242) - 1) AS ?thisPositionOn63) . BIND(?this AS ?pfs1t255) . BIND(URI(CONCAT(STR(?thisSequence), '#position', STR(?thisPositionOn62))) AS ?pfsb59) . BIND(URI(CONCAT(STR(?thisSequence), '#position', STR(?thisPositionOn63))) AS ?pfse60) . FILTER (REGEX('G[ARNDCQEGHILKMFPSTWYVBZJUOX][ED]', SUBSTR(?thisSequenceValue, ?thisPositionOn62, (?thisPositionOn63 - ?thisPositionOn62)))) . BIND(URI(CONCAT(STR(?this), '#MF_00339a58')) AS ?annotation58) . BIND(?this AS ?pfs57) . } OPTIONAL { ?this up:sequence ?thisSequence . ?thisSequence rdf:value ?thisSequenceValue . ?templateMotifMatch260 faldo:location ?templateMotifSequenceMatchRegionP0A796261 ; edam:is_output_of ?templateMotifSequenceProfileAlignmentOperationP0A796263 ; rdf:type edam:data_0869 ; rdf:value ?templateMotifCigarP0A796MF_00339256 . ?templateMotifSequenceMatchRegionP0A796261 faldo:begin ?templateMotifSequenceMatchBeginP0A796262 . ?templateMotifSequenceMatchBeginP0A796262 faldo:position ?templateMotifSequenceMatchBeginPositionP0A796257 ; faldo:reference isoform:P0A796-1 . ?templateMotifSequenceProfileAlignmentOperationP0A796263 edam:has_input signature:MF_00339 ; rdf:type edam:operation_0300 . ?targetMotifMatch264 faldo:location ?targetMotifMatchRegionMatch265 ; edam:is_output_of ?targetMotifSequenceAlignmentOperationMF_00339267 ; rdf:type edam:data_0869 ; rdf:value ?targetMotifMatchCigarP0A796MF_00339258 . ?targetMotifMatchRegionMatch265 faldo:begin ?targetMotifMatchRegionMatchBeginMF_00339266 . ?targetMotifMatchRegionMatchBeginMF_00339266 faldo:position ?targetMotifMatchRegionMatchBeginPositionMF_00339259 ; faldo:reference ?thisSequence . ?targetMotifSequenceAlignmentOperationMF_00339267 edam:has_input signature:MF_00339 ; rdf:type edam:operation_0300 . BIND(STRLEN(REPLACE(SUBSTR(?templateMotifCigarP0A796MF_00339256, 1, (STRLEN(?templateMotifCigarP0A796MF_00339256) - STRLEN(REPLACE(?templateMotifCigarP0A796MF_00339256, CONCAT('^(?:-*[^-]){', STR(((214 - ?templateMotifSequenceMatchBeginPositionP0A796257) + 1)), '}'), '')))), '[a-z]', '')) AS ?step1268) . BIND((STRLEN(SUBSTR(?targetMotifMatchCigarP0A796MF_00339258, 1, (STRLEN(?targetMotifMatchCigarP0A796MF_00339258) - STRLEN(REPLACE(?targetMotifMatchCigarP0A796MF_00339258, CONCAT('^(?:[a-z]*(?:[A-Z]|-)){', STR(?step1268), '}'), ''))))) - STRLEN(REPLACE(SUBSTR(?targetMotifMatchCigarP0A796MF_00339258, 1, (STRLEN(?targetMotifMatchCigarP0A796MF_00339258) - STRLEN(REPLACE(?targetMotifMatchCigarP0A796MF_00339258, CONCAT('^(?:[a-z]*(?:[A-Z]|-)){', STR(?step1268), '}'), '')))), '[^-]', ''))) AS ?step2269) . BIND(((?step2269 + ?targetMotifMatchRegionMatchBeginPositionMF_00339259) - 1) AS ?thisPositionOn69) . BIND(STRLEN(REPLACE(SUBSTR(?templateMotifCigarP0A796MF_00339256, 1, (STRLEN(?templateMotifCigarP0A796MF_00339256) - STRLEN(REPLACE(?templateMotifCigarP0A796MF_00339256, CONCAT('^(?:-*[^-]){', STR(((216 - ?templateMotifSequenceMatchBeginPositionP0A796257) + 1)), '}'), '')))), '[a-z]', '')) AS ?step1270) . BIND((STRLEN(SUBSTR(?targetMotifMatchCigarP0A796MF_00339258, 1, (STRLEN(?targetMotifMatchCigarP0A796MF_00339258) - STRLEN(REPLACE(?targetMotifMatchCigarP0A796MF_00339258, CONCAT('^(?:[a-z]*(?:[A-Z]|-)){', STR(?step1270), '}'), ''))))) - STRLEN(REPLACE(SUBSTR(?targetMotifMatchCigarP0A796MF_00339258, 1, (STRLEN(?targetMotifMatchCigarP0A796MF_00339258) - STRLEN(REPLACE(?targetMotifMatchCigarP0A796MF_00339258, CONCAT('^(?:[a-z]*(?:[A-Z]|-)){', STR(?step1270), '}'), '')))), '[^-]', ''))) AS ?step2271) . BIND(((?step2271 + ?targetMotifMatchRegionMatchBeginPositionMF_00339259) - 1) AS ?thisPositionOn70) . BIND(?this AS ?pfs1t272) . BIND(URI(CONCAT(STR(?thisSequence), '#position', STR(?thisPositionOn69))) AS ?pfsb66) . BIND(URI(CONCAT(STR(?thisSequence), '#position', STR(?thisPositionOn70))) AS ?pfse67) . FILTER (REGEX('K[ARNDCQEGHILKMFPSTWYVBZJUOX]{2)', SUBSTR(?thisSequenceValue, ?thisPositionOn69, (?thisPositionOn70 - ?thisPositionOn69)))) . BIND(URI(CONCAT(STR(?this), '#MF_00339a65')) AS ?annotation65) . BIND(?this AS ?pfs64) . } OPTIONAL { ?this up:sequence ?thisSequence . ?thisSequence rdf:value ?thisSequenceValue . ?templateMotifMatch277 faldo:location ?templateMotifSequenceMatchRegionP0A796278 ; edam:is_output_of ?templateMotifSequenceProfileAlignmentOperationP0A796280 ; rdf:type edam:data_0869 ; rdf:value ?templateMotifCigarP0A796MF_00339273 . ?templateMotifSequenceMatchRegionP0A796278 faldo:begin ?templateMotifSequenceMatchBeginP0A796279 . ?templateMotifSequenceMatchBeginP0A796279 faldo:position ?templateMotifSequenceMatchBeginPositionP0A796274 ; faldo:reference isoform:P0A796-1 . ?templateMotifSequenceProfileAlignmentOperationP0A796280 edam:has_input signature:MF_00339 ; rdf:type edam:operation_0300 . ?targetMotifMatch281 faldo:location ?targetMotifMatchRegionMatch282 ; edam:is_output_of ?targetMotifSequenceAlignmentOperationMF_00339284 ; rdf:type edam:data_0869 ; rdf:value ?targetMotifMatchCigarP0A796MF_00339275 . ?targetMotifMatchRegionMatch282 faldo:begin ?targetMotifMatchRegionMatchBeginMF_00339283 . ?targetMotifMatchRegionMatchBeginMF_00339283 faldo:position ?targetMotifMatchRegionMatchBeginPositionMF_00339276 ; faldo:reference ?thisSequence . ?targetMotifSequenceAlignmentOperationMF_00339284 edam:has_input signature:MF_00339 ; rdf:type edam:operation_0300 . BIND(STRLEN(REPLACE(SUBSTR(?templateMotifCigarP0A796MF_00339273, 1, (STRLEN(?templateMotifCigarP0A796MF_00339273) - STRLEN(REPLACE(?templateMotifCigarP0A796MF_00339273, CONCAT('^(?:-*[^-]){', STR(((250 - ?templateMotifSequenceMatchBeginPositionP0A796274) + 1)), '}'), '')))), '[a-z]', '')) AS ?step1285) . BIND((STRLEN(SUBSTR(?targetMotifMatchCigarP0A796MF_00339275, 1, (STRLEN(?targetMotifMatchCigarP0A796MF_00339275) - STRLEN(REPLACE(?targetMotifMatchCigarP0A796MF_00339275, CONCAT('^(?:[a-z]*(?:[A-Z]|-)){', STR(?step1285), '}'), ''))))) - STRLEN(REPLACE(SUBSTR(?targetMotifMatchCigarP0A796MF_00339275, 1, (STRLEN(?targetMotifMatchCigarP0A796MF_00339275) - STRLEN(REPLACE(?targetMotifMatchCigarP0A796MF_00339275, CONCAT('^(?:[a-z]*(?:[A-Z]|-)){', STR(?step1285), '}'), '')))), '[^-]', ''))) AS ?step2286) . BIND(((?step2286 + ?targetMotifMatchRegionMatchBeginPositionMF_00339276) - 1) AS ?thisPositionOn77) . BIND(STRLEN(REPLACE(SUBSTR(?templateMotifCigarP0A796MF_00339273, 1, (STRLEN(?templateMotifCigarP0A796MF_00339273) - STRLEN(REPLACE(?templateMotifCigarP0A796MF_00339273, CONCAT('^(?:-*[^-]){', STR(((253 - ?templateMotifSequenceMatchBeginPositionP0A796274) + 1)), '}'), '')))), '[a-z]', '')) AS ?step1287) . BIND((STRLEN(SUBSTR(?targetMotifMatchCigarP0A796MF_00339275, 1, (STRLEN(?targetMotifMatchCigarP0A796MF_00339275) - STRLEN(REPLACE(?targetMotifMatchCigarP0A796MF_00339275, CONCAT('^(?:[a-z]*(?:[A-Z]|-)){', STR(?step1287), '}'), ''))))) - STRLEN(REPLACE(SUBSTR(?targetMotifMatchCigarP0A796MF_00339275, 1, (STRLEN(?targetMotifMatchCigarP0A796MF_00339275) - STRLEN(REPLACE(?targetMotifMatchCigarP0A796MF_00339275, CONCAT('^(?:[a-z]*(?:[A-Z]|-)){', STR(?step1287), '}'), '')))), '[^-]', ''))) AS ?step2288) . BIND(((?step2288 + ?targetMotifMatchRegionMatchBeginPositionMF_00339276) - 1) AS ?thisPositionOn78) . BIND(?this AS ?pfs1t289) . BIND(URI(CONCAT(STR(?thisSequence), '#position', STR(?thisPositionOn77))) AS ?pfsb73) . BIND(URI(CONCAT(STR(?thisSequence), '#position', STR(?thisPositionOn78))) AS ?pfse74) . FILTER (REGEX('[HY][ARNDCQEGHILKMFPSTWYVBZJUOX]{2)R', SUBSTR(?thisSequenceValue, ?thisPositionOn77, (?thisPositionOn78 - ?thisPositionOn77)))) . BIND(URI(CONCAT(STR(?this), '#MF_00339a72')) AS ?annotation72) . BIND(?this AS ?pfs71) . } OPTIONAL { ?this up:sequence ?thisSequence . ?thisSequence rdf:value ?thisSequenceValue . ?templateMotifMatch294 faldo:location ?templateMotifSequenceMatchRegionP0A796295 ; edam:is_output_of ?templateMotifSequenceProfileAlignmentOperationP0A796297 ; rdf:type edam:data_0869 ; rdf:value ?templateMotifCigarP0A796MF_00339290 . ?templateMotifSequenceMatchRegionP0A796295 faldo:begin ?templateMotifSequenceMatchBeginP0A796296 . ?templateMotifSequenceMatchBeginP0A796296 faldo:position ?templateMotifSequenceMatchBeginPositionP0A796291 ; faldo:reference isoform:P0A796-1 . ?templateMotifSequenceProfileAlignmentOperationP0A796297 edam:has_input signature:MF_00339 ; rdf:type edam:operation_0300 . ?targetMotifMatch298 faldo:location ?targetMotifMatchRegionMatch299 ; edam:is_output_of ?targetMotifSequenceAlignmentOperationMF_00339301 ; rdf:type edam:data_0869 ; rdf:value ?targetMotifMatchCigarP0A796MF_00339292 . ?targetMotifMatchRegionMatch299 faldo:begin ?targetMotifMatchRegionMatchBeginMF_00339300 . ?targetMotifMatchRegionMatchBeginMF_00339300 faldo:position ?targetMotifMatchRegionMatchBeginPositionMF_00339293 ; faldo:reference ?thisSequence . ?targetMotifSequenceAlignmentOperationMF_00339301 edam:has_input signature:MF_00339 ; rdf:type edam:operation_0300 . BIND(STRLEN(REPLACE(SUBSTR(?templateMotifCigarP0A796MF_00339290, 1, (STRLEN(?templateMotifCigarP0A796MF_00339290) - STRLEN(REPLACE(?templateMotifCigarP0A796MF_00339290, CONCAT('^(?:-*[^-]){', STR(((128 - ?templateMotifSequenceMatchBeginPositionP0A796291) + 1)), '}'), '')))), '[a-z]', '')) AS ?step1302) . BIND((STRLEN(SUBSTR(?targetMotifMatchCigarP0A796MF_00339292, 1, (STRLEN(?targetMotifMatchCigarP0A796MF_00339292) - STRLEN(REPLACE(?targetMotifMatchCigarP0A796MF_00339292, CONCAT('^(?:[a-z]*(?:[A-Z]|-)){', STR(?step1302), '}'), ''))))) - STRLEN(REPLACE(SUBSTR(?targetMotifMatchCigarP0A796MF_00339292, 1, (STRLEN(?targetMotifMatchCigarP0A796MF_00339292) - STRLEN(REPLACE(?targetMotifMatchCigarP0A796MF_00339292, CONCAT('^(?:[a-z]*(?:[A-Z]|-)){', STR(?step1302), '}'), '')))), '[^-]', ''))) AS ?step2303) . BIND(((?step2303 + ?targetMotifMatchRegionMatchBeginPositionMF_00339293) - 1) AS ?thisPositionOn83) . BIND(?thisPositionOn83 AS ?thisPositionOn84) . BIND(?this AS ?pfs1t304) . BIND(URI(CONCAT(STR(?thisSequence), '#position', STR(?thisPositionOn83))) AS ?pfsb81) . BIND(URI(CONCAT(STR(?thisSequence), '#position', STR(?thisPositionOn84))) AS ?pfse82) . FILTER ((SUBSTR(?thisSequenceValue, ?thisPositionOn83, 1) = 'D')) . BIND(URI(CONCAT(STR(?this), '#MF_00339a80')) AS ?annotation80) . BIND(?this AS ?pfs79) . } OPTIONAL { ?this up:sequence ?thisSequence . ?thisSequence rdf:value ?thisSequenceValue . ?templateMotifMatch309 faldo:location ?templateMotifSequenceMatchRegionP0A796310 ; edam:is_output_of ?templateMotifSequenceProfileAlignmentOperationP0A796312 ; rdf:type edam:data_0869 ; rdf:value ?templateMotifCigarP0A796MF_00339305 . ?templateMotifSequenceMatchRegionP0A796310 faldo:begin ?templateMotifSequenceMatchBeginP0A796311 . ?templateMotifSequenceMatchBeginP0A796311 faldo:position ?templateMotifSequenceMatchBeginPositionP0A796306 ; faldo:reference isoform:P0A796-1 . ?templateMotifSequenceProfileAlignmentOperationP0A796312 edam:has_input signature:MF_00339 ; rdf:type edam:operation_0300 . ?targetMotifMatch313 faldo:location ?targetMotifMatchRegionMatch314 ; edam:is_output_of ?targetMotifSequenceAlignmentOperationMF_00339316 ; rdf:type edam:data_0869 ; rdf:value ?targetMotifMatchCigarP0A796MF_00339307 . ?targetMotifMatchRegionMatch314 faldo:begin ?targetMotifMatchRegionMatchBeginMF_00339315 . ?targetMotifMatchRegionMatchBeginMF_00339315 faldo:position ?targetMotifMatchRegionMatchBeginPositionMF_00339308 ; faldo:reference ?thisSequence . ?targetMotifSequenceAlignmentOperationMF_00339316 edam:has_input signature:MF_00339 ; rdf:type edam:operation_0300 . BIND(STRLEN(REPLACE(SUBSTR(?templateMotifCigarP0A796MF_00339305, 1, (STRLEN(?templateMotifCigarP0A796MF_00339305) - STRLEN(REPLACE(?templateMotifCigarP0A796MF_00339305, CONCAT('^(?:-*[^-]){', STR(((104 - ?templateMotifSequenceMatchBeginPositionP0A796306) + 1)), '}'), '')))), '[a-z]', '')) AS ?step1317) . BIND((STRLEN(SUBSTR(?targetMotifMatchCigarP0A796MF_00339307, 1, (STRLEN(?targetMotifMatchCigarP0A796MF_00339307) - STRLEN(REPLACE(?targetMotifMatchCigarP0A796MF_00339307, CONCAT('^(?:[a-z]*(?:[A-Z]|-)){', STR(?step1317), '}'), ''))))) - STRLEN(REPLACE(SUBSTR(?targetMotifMatchCigarP0A796MF_00339307, 1, (STRLEN(?targetMotifMatchCigarP0A796MF_00339307) - STRLEN(REPLACE(?targetMotifMatchCigarP0A796MF_00339307, CONCAT('^(?:[a-z]*(?:[A-Z]|-)){', STR(?step1317), '}'), '')))), '[^-]', ''))) AS ?step2318) . BIND(((?step2318 + ?targetMotifMatchRegionMatchBeginPositionMF_00339308) - 1) AS ?thisPositionOn90) . BIND(?thisPositionOn90 AS ?thisPositionOn91) . BIND(?this AS ?pfs1t319) . BIND(URI(CONCAT(STR(?thisSequence), '#position', STR(?thisPositionOn90))) AS ?pfsb87) . BIND(URI(CONCAT(STR(?thisSequence), '#position', STR(?thisPositionOn91))) AS ?pfse88) . FILTER (REGEX('[DEN]', SUBSTR(?thisSequenceValue, ?thisPositionOn90, 1))) . BIND(URI(CONCAT(STR(?this), '#MF_00339a86')) AS ?annotation86) . BIND(?this AS ?pfs85) . } OPTIONAL { ?this up:sequence ?thisSequence . ?thisSequence rdf:value ?thisSequenceValue . ?templateMotifMatch324 faldo:location ?templateMotifSequenceMatchRegionP0A796325 ; edam:is_output_of ?templateMotifSequenceProfileAlignmentOperationP0A796327 ; rdf:type edam:data_0869 ; rdf:value ?templateMotifCigarP0A796MF_00339320 . ?templateMotifSequenceMatchRegionP0A796325 faldo:begin ?templateMotifSequenceMatchBeginP0A796326 . ?templateMotifSequenceMatchBeginP0A796326 faldo:position ?templateMotifSequenceMatchBeginPositionP0A796321 ; faldo:reference isoform:P0A796-1 . ?templateMotifSequenceProfileAlignmentOperationP0A796327 edam:has_input signature:MF_00339 ; rdf:type edam:operation_0300 . ?targetMotifMatch328 faldo:location ?targetMotifMatchRegionMatch329 ; edam:is_output_of ?targetMotifSequenceAlignmentOperationMF_00339331 ; rdf:type edam:data_0869 ; rdf:value ?targetMotifMatchCigarP0A796MF_00339322 . ?targetMotifMatchRegionMatch329 faldo:begin ?targetMotifMatchRegionMatchBeginMF_00339330 . ?targetMotifMatchRegionMatchBeginMF_00339330 faldo:position ?targetMotifMatchRegionMatchBeginPositionMF_00339323 ; faldo:reference ?thisSequence . ?targetMotifSequenceAlignmentOperationMF_00339331 edam:has_input signature:MF_00339 ; rdf:type edam:operation_0300 . BIND(STRLEN(REPLACE(SUBSTR(?templateMotifCigarP0A796MF_00339320, 1, (STRLEN(?templateMotifCigarP0A796MF_00339320) - STRLEN(REPLACE(?templateMotifCigarP0A796MF_00339320, CONCAT('^(?:-*[^-]){', STR(((12 - ?templateMotifSequenceMatchBeginPositionP0A796321) + 1)), '}'), '')))), '[a-z]', '')) AS ?step1332) . BIND((STRLEN(SUBSTR(?targetMotifMatchCigarP0A796MF_00339322, 1, (STRLEN(?targetMotifMatchCigarP0A796MF_00339322) - STRLEN(REPLACE(?targetMotifMatchCigarP0A796MF_00339322, CONCAT('^(?:[a-z]*(?:[A-Z]|-)){', STR(?step1332), '}'), ''))))) - STRLEN(REPLACE(SUBSTR(?targetMotifMatchCigarP0A796MF_00339322, 1, (STRLEN(?targetMotifMatchCigarP0A796MF_00339322) - STRLEN(REPLACE(?targetMotifMatchCigarP0A796MF_00339322, CONCAT('^(?:[a-z]*(?:[A-Z]|-)){', STR(?step1332), '}'), '')))), '[^-]', ''))) AS ?step2333) . BIND(((?step2333 + ?targetMotifMatchRegionMatchBeginPositionMF_00339323) - 1) AS ?thisPositionOn97) . BIND(?thisPositionOn97 AS ?thisPositionOn98) . BIND(?this AS ?pfs1t334) . BIND(URI(CONCAT(STR(?thisSequence), '#position', STR(?thisPositionOn97))) AS ?pfsb94) . BIND(URI(CONCAT(STR(?thisSequence), '#position', STR(?thisPositionOn98))) AS ?pfse95) . FILTER ((SUBSTR(?thisSequenceValue, ?thisPositionOn97, 1) = 'G')) . BIND(URI(CONCAT(STR(?this), '#MF_00339a93')) AS ?annotation93) . BIND(?this AS ?pfs92) . } OPTIONAL { ?this up:sequence ?thisSequence . ?thisSequence rdf:value ?thisSequenceValue . ?templateMotifMatch339 faldo:location ?templateMotifSequenceMatchRegionP0A796340 ; edam:is_output_of ?templateMotifSequenceProfileAlignmentOperationP0A796342 ; rdf:type edam:data_0869 ; rdf:value ?templateMotifCigarP0A796MF_00339335 . ?templateMotifSequenceMatchRegionP0A796340 faldo:begin ?templateMotifSequenceMatchBeginP0A796341 . ?templateMotifSequenceMatchBeginP0A796341 faldo:position ?templateMotifSequenceMatchBeginPositionP0A796336 ; faldo:reference isoform:P0A796-1 . ?templateMotifSequenceProfileAlignmentOperationP0A796342 edam:has_input signature:MF_00339 ; rdf:type edam:operation_0300 . ?targetMotifMatch343 faldo:location ?targetMotifMatchRegionMatch344 ; edam:is_output_of ?targetMotifSequenceAlignmentOperationMF_00339346 ; rdf:type edam:data_0869 ; rdf:value ?targetMotifMatchCigarP0A796MF_00339337 . ?targetMotifMatchRegionMatch344 faldo:begin ?targetMotifMatchRegionMatchBeginMF_00339345 . ?targetMotifMatchRegionMatchBeginMF_00339345 faldo:position ?targetMotifMatchRegionMatchBeginPositionMF_00339338 ; faldo:reference ?thisSequence . ?targetMotifSequenceAlignmentOperationMF_00339346 edam:has_input signature:MF_00339 ; rdf:type edam:operation_0300 . BIND(STRLEN(REPLACE(SUBSTR(?templateMotifCigarP0A796MF_00339335, 1, (STRLEN(?templateMotifCigarP0A796MF_00339335) - STRLEN(REPLACE(?templateMotifCigarP0A796MF_00339335, CONCAT('^(?:-*[^-]){', STR(((155 - ?templateMotifSequenceMatchBeginPositionP0A796336) + 1)), '}'), '')))), '[a-z]', '')) AS ?step1347) . BIND((STRLEN(SUBSTR(?targetMotifMatchCigarP0A796MF_00339337, 1, (STRLEN(?targetMotifMatchCigarP0A796MF_00339337) - STRLEN(REPLACE(?targetMotifMatchCigarP0A796MF_00339337, CONCAT('^(?:[a-z]*(?:[A-Z]|-)){', STR(?step1347), '}'), ''))))) - STRLEN(REPLACE(SUBSTR(?targetMotifMatchCigarP0A796MF_00339337, 1, (STRLEN(?targetMotifMatchCigarP0A796MF_00339337) - STRLEN(REPLACE(?targetMotifMatchCigarP0A796MF_00339337, CONCAT('^(?:[a-z]*(?:[A-Z]|-)){', STR(?step1347), '}'), '')))), '[^-]', ''))) AS ?step2348) . BIND(((?step2348 + ?targetMotifMatchRegionMatchBeginPositionMF_00339338) - 1) AS ?thisPositionOn104) . BIND(?thisPositionOn104 AS ?thisPositionOn105) . BIND(?this AS ?pfs1t349) . BIND(URI(CONCAT(STR(?thisSequence), '#position', STR(?thisPositionOn104))) AS ?pfsb101) . BIND(URI(CONCAT(STR(?thisSequence), '#position', STR(?thisPositionOn105))) AS ?pfse102) . FILTER (REGEX('[RK]', SUBSTR(?thisSequenceValue, ?thisPositionOn104, 1))) . BIND(URI(CONCAT(STR(?this), '#MF_00339a100')) AS ?annotation100) . BIND(?this AS ?pfs99) . } OPTIONAL { ?this up:sequence ?thisSequence . ?thisSequence rdf:value ?thisSequenceValue . ?templateMotifMatch354 faldo:location ?templateMotifSequenceMatchRegionP0A796355 ; edam:is_output_of ?templateMotifSequenceProfileAlignmentOperationP0A796357 ; rdf:type edam:data_0869 ; rdf:value ?templateMotifCigarP0A796MF_00339350 . ?templateMotifSequenceMatchRegionP0A796355 faldo:begin ?templateMotifSequenceMatchBeginP0A796356 . ?templateMotifSequenceMatchBeginP0A796356 faldo:position ?templateMotifSequenceMatchBeginPositionP0A796351 ; faldo:reference isoform:P0A796-1 . ?templateMotifSequenceProfileAlignmentOperationP0A796357 edam:has_input signature:MF_00339 ; rdf:type edam:operation_0300 . ?targetMotifMatch358 faldo:location ?targetMotifMatchRegionMatch359 ; edam:is_output_of ?targetMotifSequenceAlignmentOperationMF_00339361 ; rdf:type edam:data_0869 ; rdf:value ?targetMotifMatchCigarP0A796MF_00339352 . ?targetMotifMatchRegionMatch359 faldo:begin ?targetMotifMatchRegionMatchBeginMF_00339360 . ?targetMotifMatchRegionMatchBeginMF_00339360 faldo:position ?targetMotifMatchRegionMatchBeginPositionMF_00339353 ; faldo:reference ?thisSequence . ?targetMotifSequenceAlignmentOperationMF_00339361 edam:has_input signature:MF_00339 ; rdf:type edam:operation_0300 . BIND(STRLEN(REPLACE(SUBSTR(?templateMotifCigarP0A796MF_00339350, 1, (STRLEN(?templateMotifCigarP0A796MF_00339350) - STRLEN(REPLACE(?templateMotifCigarP0A796MF_00339350, CONCAT('^(?:-*[^-]){', STR(((163 - ?templateMotifSequenceMatchBeginPositionP0A796351) + 1)), '}'), '')))), '[a-z]', '')) AS ?step1362) . BIND((STRLEN(SUBSTR(?targetMotifMatchCigarP0A796MF_00339352, 1, (STRLEN(?targetMotifMatchCigarP0A796MF_00339352) - STRLEN(REPLACE(?targetMotifMatchCigarP0A796MF_00339352, CONCAT('^(?:[a-z]*(?:[A-Z]|-)){', STR(?step1362), '}'), ''))))) - STRLEN(REPLACE(SUBSTR(?targetMotifMatchCigarP0A796MF_00339352, 1, (STRLEN(?targetMotifMatchCigarP0A796MF_00339352) - STRLEN(REPLACE(?targetMotifMatchCigarP0A796MF_00339352, CONCAT('^(?:[a-z]*(?:[A-Z]|-)){', STR(?step1362), '}'), '')))), '[^-]', ''))) AS ?step2363) . BIND(((?step2363 + ?targetMotifMatchRegionMatchBeginPositionMF_00339353) - 1) AS ?thisPositionOn112) . BIND(?thisPositionOn112 AS ?thisPositionOn113) . BIND(?this AS ?pfs1t364) . BIND(URI(CONCAT(STR(?thisSequence), '#position', STR(?thisPositionOn112))) AS ?pfsb108) . BIND(URI(CONCAT(STR(?thisSequence), '#position', STR(?thisPositionOn113))) AS ?pfse109) . FILTER ((SUBSTR(?thisSequenceValue, ?thisPositionOn112, 1) = 'R')) . BIND(URI(CONCAT(STR(?this), '#MF_00339a107')) AS ?annotation107) . BIND(?this AS ?pfs106) . } OPTIONAL { ?this up:sequence ?thisSequence . ?thisSequence rdf:value ?thisSequenceValue . ?templateMotifMatch369 faldo:location ?templateMotifSequenceMatchRegionP0A796370 ; edam:is_output_of ?templateMotifSequenceProfileAlignmentOperationP0A796372 ; rdf:type edam:data_0869 ; rdf:value ?templateMotifCigarP0A796MF_00339365 . ?templateMotifSequenceMatchRegionP0A796370 faldo:begin ?templateMotifSequenceMatchBeginP0A796371 . ?templateMotifSequenceMatchBeginP0A796371 faldo:position ?templateMotifSequenceMatchBeginPositionP0A796366 ; faldo:reference isoform:P0A796-1 . ?templateMotifSequenceProfileAlignmentOperationP0A796372 edam:has_input signature:MF_00339 ; rdf:type edam:operation_0300 . ?targetMotifMatch373 faldo:location ?targetMotifMatchRegionMatch374 ; edam:is_output_of ?targetMotifSequenceAlignmentOperationMF_00339376 ; rdf:type edam:data_0869 ; rdf:value ?targetMotifMatchCigarP0A796MF_00339367 . ?targetMotifMatchRegionMatch374 faldo:begin ?targetMotifMatchRegionMatchBeginMF_00339375 . ?targetMotifMatchRegionMatchBeginMF_00339375 faldo:position ?targetMotifMatchRegionMatchBeginPositionMF_00339368 ; faldo:reference ?thisSequence . ?targetMotifSequenceAlignmentOperationMF_00339376 edam:has_input signature:MF_00339 ; rdf:type edam:operation_0300 . BIND(STRLEN(REPLACE(SUBSTR(?templateMotifCigarP0A796MF_00339365, 1, (STRLEN(?templateMotifCigarP0A796MF_00339365) - STRLEN(REPLACE(?templateMotifCigarP0A796MF_00339365, CONCAT('^(?:-*[^-]){', STR(((212 - ?templateMotifSequenceMatchBeginPositionP0A796366) + 1)), '}'), '')))), '[a-z]', '')) AS ?step1377) . BIND((STRLEN(SUBSTR(?targetMotifMatchCigarP0A796MF_00339367, 1, (STRLEN(?targetMotifMatchCigarP0A796MF_00339367) - STRLEN(REPLACE(?targetMotifMatchCigarP0A796MF_00339367, CONCAT('^(?:[a-z]*(?:[A-Z]|-)){', STR(?step1377), '}'), ''))))) - STRLEN(REPLACE(SUBSTR(?targetMotifMatchCigarP0A796MF_00339367, 1, (STRLEN(?targetMotifMatchCigarP0A796MF_00339367) - STRLEN(REPLACE(?targetMotifMatchCigarP0A796MF_00339367, CONCAT('^(?:[a-z]*(?:[A-Z]|-)){', STR(?step1377), '}'), '')))), '[^-]', ''))) AS ?step2378) . BIND(((?step2378 + ?targetMotifMatchRegionMatchBeginPositionMF_00339368) - 1) AS ?thisPositionOn119) . BIND(?thisPositionOn119 AS ?thisPositionOn120) . BIND(?this AS ?pfs1t379) . BIND(URI(CONCAT(STR(?thisSequence), '#position', STR(?thisPositionOn119))) AS ?pfsb116) . BIND(URI(CONCAT(STR(?thisSequence), '#position', STR(?thisPositionOn120))) AS ?pfse117) . FILTER (REGEX('[RK]', SUBSTR(?thisSequenceValue, ?thisPositionOn119, 1))) . BIND(URI(CONCAT(STR(?this), '#MF_00339a115')) AS ?annotation115) . BIND(?this AS ?pfs114) . } OPTIONAL { ?this up:sequence ?thisSequence . ?thisSequence rdf:value ?thisSequenceValue . ?templateMotifMatch384 faldo:location ?templateMotifSequenceMatchRegionP0A796385 ; edam:is_output_of ?templateMotifSequenceProfileAlignmentOperationP0A796387 ; rdf:type edam:data_0869 ; rdf:value ?templateMotifCigarP0A796MF_00339380 . ?templateMotifSequenceMatchRegionP0A796385 faldo:begin ?templateMotifSequenceMatchBeginP0A796386 . ?templateMotifSequenceMatchBeginP0A796386 faldo:position ?templateMotifSequenceMatchBeginPositionP0A796381 ; faldo:reference isoform:P0A796-1 . ?templateMotifSequenceProfileAlignmentOperationP0A796387 edam:has_input signature:MF_00339 ; rdf:type edam:operation_0300 . ?targetMotifMatch388 faldo:location ?targetMotifMatchRegionMatch389 ; edam:is_output_of ?targetMotifSequenceAlignmentOperationMF_00339391 ; rdf:type edam:data_0869 ; rdf:value ?targetMotifMatchCigarP0A796MF_00339382 . ?targetMotifMatchRegionMatch389 faldo:begin ?targetMotifMatchRegionMatchBeginMF_00339390 . ?targetMotifMatchRegionMatchBeginMF_00339390 faldo:position ?targetMotifMatchRegionMatchBeginPositionMF_00339383 ; faldo:reference ?thisSequence . ?targetMotifSequenceAlignmentOperationMF_00339391 edam:has_input signature:MF_00339 ; rdf:type edam:operation_0300 . BIND(STRLEN(REPLACE(SUBSTR(?templateMotifCigarP0A796MF_00339380, 1, (STRLEN(?templateMotifCigarP0A796MF_00339380) - STRLEN(REPLACE(?templateMotifCigarP0A796MF_00339380, CONCAT('^(?:-*[^-]){', STR(((223 - ?templateMotifSequenceMatchBeginPositionP0A796381) + 1)), '}'), '')))), '[a-z]', '')) AS ?step1392) . BIND((STRLEN(SUBSTR(?targetMotifMatchCigarP0A796MF_00339382, 1, (STRLEN(?targetMotifMatchCigarP0A796MF_00339382) - STRLEN(REPLACE(?targetMotifMatchCigarP0A796MF_00339382, CONCAT('^(?:[a-z]*(?:[A-Z]|-)){', STR(?step1392), '}'), ''))))) - STRLEN(REPLACE(SUBSTR(?targetMotifMatchCigarP0A796MF_00339382, 1, (STRLEN(?targetMotifMatchCigarP0A796MF_00339382) - STRLEN(REPLACE(?targetMotifMatchCigarP0A796MF_00339382, CONCAT('^(?:[a-z]*(?:[A-Z]|-)){', STR(?step1392), '}'), '')))), '[^-]', ''))) AS ?step2393) . BIND(((?step2393 + ?targetMotifMatchRegionMatchBeginPositionMF_00339383) - 1) AS ?thisPositionOn127) . BIND(?thisPositionOn127 AS ?thisPositionOn128) . BIND(?this AS ?pfs1t394) . BIND(URI(CONCAT(STR(?thisSequence), '#position', STR(?thisPositionOn127))) AS ?pfsb123) . BIND(URI(CONCAT(STR(?thisSequence), '#position', STR(?thisPositionOn128))) AS ?pfse124) . FILTER ((SUBSTR(?thisSequenceValue, ?thisPositionOn127, 1) = 'E')) . BIND(URI(CONCAT(STR(?this), '#MF_00339a122')) AS ?annotation122) . BIND(?this AS ?pfs121) . } OPTIONAL { ?this up:sequence ?thisSequence . ?thisSequence rdf:value ?thisSequenceValue . ?templateMotifMatch399 faldo:location ?templateMotifSequenceMatchRegionP0A796400 ; edam:is_output_of ?templateMotifSequenceProfileAlignmentOperationP0A796402 ; rdf:type edam:data_0869 ; rdf:value ?templateMotifCigarP0A796MF_00339395 . ?templateMotifSequenceMatchRegionP0A796400 faldo:begin ?templateMotifSequenceMatchBeginP0A796401 . ?templateMotifSequenceMatchBeginP0A796401 faldo:position ?templateMotifSequenceMatchBeginPositionP0A796396 ; faldo:reference isoform:P0A796-1 . ?templateMotifSequenceProfileAlignmentOperationP0A796402 edam:has_input signature:MF_00339 ; rdf:type edam:operation_0300 . ?targetMotifMatch403 faldo:location ?targetMotifMatchRegionMatch404 ; edam:is_output_of ?targetMotifSequenceAlignmentOperationMF_00339406 ; rdf:type edam:data_0869 ; rdf:value ?targetMotifMatchCigarP0A796MF_00339397 . ?targetMotifMatchRegionMatch404 faldo:begin ?targetMotifMatchRegionMatchBeginMF_00339405 . ?targetMotifMatchRegionMatchBeginMF_00339405 faldo:position ?targetMotifMatchRegionMatchBeginPositionMF_00339398 ; faldo:reference ?thisSequence . ?targetMotifSequenceAlignmentOperationMF_00339406 edam:has_input signature:MF_00339 ; rdf:type edam:operation_0300 . BIND(STRLEN(REPLACE(SUBSTR(?templateMotifCigarP0A796MF_00339395, 1, (STRLEN(?templateMotifCigarP0A796MF_00339395) - STRLEN(REPLACE(?templateMotifCigarP0A796MF_00339395, CONCAT('^(?:-*[^-]){', STR(((244 - ?templateMotifSequenceMatchBeginPositionP0A796396) + 1)), '}'), '')))), '[a-z]', '')) AS ?step1407) . BIND((STRLEN(SUBSTR(?targetMotifMatchCigarP0A796MF_00339397, 1, (STRLEN(?targetMotifMatchCigarP0A796MF_00339397) - STRLEN(REPLACE(?targetMotifMatchCigarP0A796MF_00339397, CONCAT('^(?:[a-z]*(?:[A-Z]|-)){', STR(?step1407), '}'), ''))))) - STRLEN(REPLACE(SUBSTR(?targetMotifMatchCigarP0A796MF_00339397, 1, (STRLEN(?targetMotifMatchCigarP0A796MF_00339397) - STRLEN(REPLACE(?targetMotifMatchCigarP0A796MF_00339397, CONCAT('^(?:[a-z]*(?:[A-Z]|-)){', STR(?step1407), '}'), '')))), '[^-]', ''))) AS ?step2408) . BIND(((?step2408 + ?targetMotifMatchRegionMatchBeginPositionMF_00339398) - 1) AS ?thisPositionOn135) . BIND(?thisPositionOn135 AS ?thisPositionOn136) . BIND(?this AS ?pfs1t409) . BIND(URI(CONCAT(STR(?thisSequence), '#position', STR(?thisPositionOn135))) AS ?pfsb131) . BIND(URI(CONCAT(STR(?thisSequence), '#position', STR(?thisPositionOn136))) AS ?pfse132) . FILTER (REGEX('[RK]', SUBSTR(?thisSequenceValue, ?thisPositionOn135, 1))) . BIND(URI(CONCAT(STR(?this), '#MF_00339a130')) AS ?annotation130) . BIND(?this AS ?pfs129) . } }