CONSTRUCT { _:351900 up:source unirule:MF_01022 . _:351901 up:ecName '3.1.3.15' ; up:fullName 'Histidinol-phosphatase' ; rdf:type up:Structured_Name . _:351902 up:source unirule:MF_01022 . _:351903 up:ecName '4.2.1.19' ; up:fullName 'Imidazoleglycerol-phosphate dehydratase' ; up:shortName 'IGPD' ; rdf:type up:Structured_Name . _:351904 up:source unirule:MF_01022 . _:351905 up:source unirule:MF_01022 . _:351906 up:source unirule:MF_01022 . _:351907 up:source unirule:MF_01022 . _:351908 up:source unirule:MF_01022 . _:351909 up:source unirule:MF_01022 . _:351910 up:source unirule:MF_01022 . _:351911 up:source unirule:MF_01022 . _:351912 up:source unirule:MF_01022 . _:351913 up:source unirule:MF_01022 . _:351914 up:source unirule:MF_01022 . _:351915 up:source unirule:MF_01022 . _:351916 up:source unirule:MF_01022 . _:351917 up:source unirule:MF_01022 . _:351918 up:source unirule:MF_01022 . _:351919 up:source unirule:MF_01022 . _:351920 up:source unirule:MF_01022 . _:351921 up:source unirule:MF_01022 . _:351922 up:source unirule:MF_01022 . _:351923 up:source unirule:MF_01022 . _:351924 up:source unirule:MF_01022 . _:351925 up:source unirule:MF_01022 . _:351926 up:source unirule:MF_01022 . _:351927 up:source unirule:MF_01022 . _:351928 up:source unirule:MF_01022 . _:351929 up:source unirule:MF_01022 . _:351930 up:source unirule:MF_01022 . _:351931 up:source unirule:MF_01022 . _:351932 up:source unirule:MF_01022 . _:351933 up:source unirule:MF_01022 . _:351934 up:source unirule:MF_01022 . _:351935 up:source unirule:MF_01022 . _:351936 up:source unirule:MF_01022 . _:351937 up:source unirule:MF_01022 . ?this up:annotation ?annotation4 , ?annotation6 , ?annotation8 , ?annotation9 , ?annotation10 , ?annotation11 , ?annotation13 , ?annotation14 ; up:classifiedWith GO:0000105 , GO:0004401 , GO:0004424 , GO:0005737 , keyword:28 , keyword:368 , keyword:378 , keyword:456 , keyword:460 , keyword:479 , keyword:511 , keyword:963 ; up:domain ?namedpart1 , ?namedpart2 ; up:recommendedName ?name0 . ?name0 up:fullName 'Histidine biosynthesis bifunctional protein HisB' ; rdf:type up:Structured_Name . ?namedpart1 up:recommendedName _:351901 . ?namedpart2 up:recommendedName _:351903 . ?gene3 skos:prefLabel 'hisB' . ?annotation4 up:activity ?activity5 ; rdf:type up:Catalytic_Activity_Annotation . ?activity5 up:catalyticActivity <http://rdf.rhea-db.org/11040>; up:enzymeClass <http://purl.uniprot.org/enzyme/4.2.1.19>. ?annotation6 up:activity ?activity7 ; rdf:type up:Catalytic_Activity_Annotation . ?activity7 up:catalyticActivity <http://rdf.rhea-db.org/14465>; up:enzymeClass <http://purl.uniprot.org/enzyme/3.1.3.15>. ?annotation8 up:cofactor chebi:18420 ; rdf:type up:Cofactor_Annotation . ?annotation9 a up:Pathway_Annotation ; rdfs:comment 'Amino-acid biosynthesis; L-histidine biosynthesis; L-histidine from 5-phospho-alpha-D-ribose 1-diphosphate: step 6/9.' . ?annotation10 a up:Pathway_Annotation ; rdfs:comment 'Amino-acid biosynthesis; L-histidine biosynthesis; L-histidine from 5-phospho-alpha-D-ribose 1-diphosphate: step 8/9.' . ?annotation11 a up:Subcellular_Location_Annotation . ?annotation11li12 up:cellularComponent <http://purl.uniprot.org/locations/null>. ?annotation13 a up:Similarity_Annotation ; rdfs:comment 'In the N-terminal section; belongs to the histidinol-phosphatase family.' . ?annotation14 a up:Similarity_Annotation ; rdfs:comment 'In the C-terminal section; belongs to the imidazoleglycerol-phosphate dehydratase family.' . ?case15 up:classifiedWith keyword:862 . ?pfs16 up:annotation ?annotation17 , ?annotation23 , ?annotation29 , ?annotation35 . ?annotation17 faldo:begin ?pfsb18 ; faldo:end ?pfse19 ; up:ligand ?ligand20 ; rdf:type up:Binding_Site_Annotation . ?pfsb18 faldo:position ?thisPositionOn21 ; rdf:type faldo:ExactPosition . ?pfse19 faldo:position ?thisPositionOn22 ; rdf:type faldo:ExactPosition . ?ligand20 rdfs:subClassOf chebi:29105 . ?annotation23 faldo:begin ?pfsb24 ; faldo:end ?pfse25 ; up:ligand ?ligand26 ; rdf:type up:Binding_Site_Annotation . ?pfsb24 faldo:position ?thisPositionOn27 ; rdf:type faldo:ExactPosition . ?pfse25 faldo:position ?thisPositionOn28 ; rdf:type faldo:ExactPosition . ?ligand26 rdfs:subClassOf chebi:29105 . ?annotation29 faldo:begin ?pfsb30 ; faldo:end ?pfse31 ; up:ligand ?ligand32 ; rdf:type up:Binding_Site_Annotation . ?pfsb30 faldo:position ?thisPositionOn33 ; rdf:type faldo:ExactPosition . ?pfse31 faldo:position ?thisPositionOn34 ; rdf:type faldo:ExactPosition . ?ligand32 rdfs:subClassOf chebi:29105 . ?annotation35 faldo:begin ?pfsb36 ; faldo:end ?pfse37 ; up:ligand ?ligand38 ; rdf:type up:Binding_Site_Annotation . ?pfsb36 faldo:position ?thisPositionOn39 ; rdf:type faldo:ExactPosition . ?pfse37 faldo:position ?thisPositionOn40 ; rdf:type faldo:ExactPosition . ?ligand38 rdfs:subClassOf chebi:29105 . ?pfs41 up:annotation ?annotation42 . ?annotation42 faldo:begin ?pfsb43 ; faldo:end ?pfse44 ; rdf:type up:Region_Annotation ; rdfs:comment 'Histidinol-phosphatase' . ?pfsb43 faldo:position ?thisPositionOn45 ; rdf:type faldo:ExactPosition . ?pfse44 faldo:position ?thisPositionOn46 ; rdf:type faldo:ExactPosition . ?pfs47 up:annotation ?annotation48 . ?annotation48 faldo:begin ?pfsb49 ; faldo:end ?pfse50 ; rdf:type up:Region_Annotation ; rdfs:comment 'Imidazoleglycerol-phosphate dehydratase' . ?pfsb49 faldo:position ?thisPositionOn51 ; rdf:type faldo:ExactPosition . ?pfse50 faldo:position ?thisPositionOn52 ; rdf:type faldo:ExactPosition . ?pfs53 up:annotation ?annotation54 . ?annotation54 faldo:begin ?pfsb55 ; faldo:end ?pfse56 ; rdf:type up:Active_Site_Annotation ; rdfs:comment 'Nucleophile' . ?pfsb55 faldo:position ?thisPositionOn57 ; rdf:type faldo:ExactPosition . ?pfse56 faldo:position ?thisPositionOn58 ; rdf:type faldo:ExactPosition . ?pfs59 up:annotation ?annotation60 . ?annotation60 faldo:begin ?pfsb61 ; faldo:end ?pfse62 ; rdf:type up:Active_Site_Annotation ; rdfs:comment 'Proton donor' . ?pfsb61 faldo:position ?thisPositionOn63 ; rdf:type faldo:ExactPosition . ?pfse62 faldo:position ?thisPositionOn64 ; rdf:type faldo:ExactPosition . ?pfs65 up:annotation ?annotation66 . ?annotation66 faldo:begin ?pfsb67 ; faldo:end ?pfse68 ; up:ligand ?ligand69 ; rdf:type up:Binding_Site_Annotation . ?pfsb67 faldo:position ?thisPositionOn70 ; rdf:type faldo:ExactPosition . ?pfse68 faldo:position ?thisPositionOn71 ; rdf:type faldo:ExactPosition . ?ligand69 rdfs:subClassOf chebi:18420 . ?pfs72 up:annotation ?annotation73 . ?annotation73 faldo:begin ?pfsb74 ; faldo:end ?pfse75 ; up:ligand ?ligand76 ; rdf:type up:Binding_Site_Annotation . ?pfsb74 faldo:position ?thisPositionOn77 ; rdf:type faldo:ExactPosition . ?pfse75 faldo:position ?thisPositionOn78 ; rdf:type faldo:ExactPosition . ?ligand76 rdfs:subClassOf chebi:18420 . ?pfs79 up:annotation ?annotation80 . ?annotation80 faldo:begin ?pfsb81 ; faldo:end ?pfse82 ; up:ligand ?ligand83 ; rdf:type up:Binding_Site_Annotation . ?pfsb81 faldo:position ?thisPositionOn84 ; rdf:type faldo:ExactPosition . ?pfse82 faldo:position ?thisPositionOn85 ; rdf:type faldo:ExactPosition . ?ligand83 rdfs:subClassOf chebi:18420 . _:351938 a rdf:Statement ; up:attribution _:351900 ; rdf:subject ?this ; rdf:predicate up:recommendedName ; rdf:object ?name0 . _:351939 a rdf:Statement ; up:attribution _:351902 ; rdf:subject ?this ; rdf:predicate up:domain ; rdf:object ?namedpart1 . _:351940 a rdf:Statement ; up:attribution _:351904 ; rdf:subject ?this ; rdf:predicate up:domain ; rdf:object ?namedpart2 . _:351941 a rdf:Statement ; up:attribution _:351905 ; rdf:subject ?gene3 ; rdf:predicate up:encodedBy ; rdf:object ?gene3 . _:351942 a rdf:Statement ; up:attribution _:351906 ; rdf:subject ?this ; rdf:predicate up:annotation ; rdf:object ?annotation4 . _:351943 a rdf:Statement ; up:attribution _:351907 ; rdf:subject ?this ; rdf:predicate up:annotation ; rdf:object ?annotation6 . _:351944 a rdf:Statement ; up:attribution _:351908 ; rdf:subject ?this ; rdf:predicate up:annotation ; rdf:object ?annotation8 . _:351945 a rdf:Statement ; up:attribution _:351909 ; rdf:subject ?this ; rdf:predicate up:annotation ; rdf:object ?annotation9 . _:351946 a rdf:Statement ; up:attribution _:351910 ; rdf:subject ?this ; rdf:predicate up:annotation ; rdf:object ?annotation10 . _:351947 a rdf:Statement ; up:attribution _:351911 ; rdf:subject ?this ; rdf:predicate up:annotation ; rdf:object ?annotation11 . _:351948 a rdf:Statement ; up:attribution _:351912 ; rdf:subject ?this ; rdf:predicate up:annotation ; rdf:object ?annotation13 . _:351949 a rdf:Statement ; up:attribution _:351913 ; rdf:subject ?this ; rdf:predicate up:annotation ; rdf:object ?annotation14 . _:351950 a rdf:Statement ; up:attribution _:351914 ; rdf:subject ?this ; rdf:predicate up:classifiedWith ; rdf:object keyword:28 . _:351951 a rdf:Statement ; up:attribution _:351915 ; rdf:subject ?this ; rdf:predicate up:classifiedWith ; rdf:object keyword:963 . _:351952 a rdf:Statement ; up:attribution _:351916 ; rdf:subject ?this ; rdf:predicate up:classifiedWith ; rdf:object keyword:368 . _:351953 a rdf:Statement ; up:attribution _:351917 ; rdf:subject ?this ; rdf:predicate up:classifiedWith ; rdf:object keyword:378 . _:351954 a rdf:Statement ; up:attribution _:351918 ; rdf:subject ?this ; rdf:predicate up:classifiedWith ; rdf:object keyword:456 . _:351955 a rdf:Statement ; up:attribution _:351919 ; rdf:subject ?this ; rdf:predicate up:classifiedWith ; rdf:object keyword:460 . _:351956 a rdf:Statement ; up:attribution _:351920 ; rdf:subject ?this ; rdf:predicate up:classifiedWith ; rdf:object keyword:479 . _:351957 a rdf:Statement ; up:attribution _:351921 ; rdf:subject ?this ; rdf:predicate up:classifiedWith ; rdf:object keyword:511 . _:351958 a rdf:Statement ; up:attribution _:351922 ; rdf:subject ?this ; rdf:predicate up:classifiedWith ; rdf:object GO:0004401 . _:351959 a rdf:Statement ; up:attribution _:351923 ; rdf:subject ?this ; rdf:predicate up:classifiedWith ; rdf:object GO:0004424 . _:351960 a rdf:Statement ; up:attribution _:351924 ; rdf:subject ?this ; rdf:predicate up:classifiedWith ; rdf:object GO:0000105 . _:351961 a rdf:Statement ; up:attribution _:351925 ; rdf:subject ?this ; rdf:predicate up:classifiedWith ; rdf:object GO:0005737 . _:351962 a rdf:Statement ; up:attribution _:351926 ; rdf:subject ?case15 ; rdf:predicate up:classifiedWith ; rdf:object keyword:862 . _:351963 a rdf:Statement ; up:source unirule:MF_01022 ; rdf:subject ?pfs16 ; rdf:predicate up:annotation ; rdf:object ?annotation17 . _:351964 a rdf:Statement ; up:attribution _:351927 ; rdf:subject ?pfs16 ; rdf:predicate up:annotation ; rdf:object ?annotation17 . _:351965 a rdf:Statement ; up:source unirule:MF_01022 ; rdf:subject ?pfs16 ; rdf:predicate up:annotation ; rdf:object ?annotation23 . _:351966 a rdf:Statement ; up:attribution _:351928 ; rdf:subject ?pfs16 ; rdf:predicate up:annotation ; rdf:object ?annotation23 . _:351967 a rdf:Statement ; up:source unirule:MF_01022 ; rdf:subject ?pfs16 ; rdf:predicate up:annotation ; rdf:object ?annotation29 . _:351968 a rdf:Statement ; up:attribution _:351929 ; rdf:subject ?pfs16 ; rdf:predicate up:annotation ; rdf:object ?annotation29 . _:351969 a rdf:Statement ; up:source unirule:MF_01022 ; rdf:subject ?pfs16 ; rdf:predicate up:annotation ; rdf:object ?annotation35 . _:351970 a rdf:Statement ; up:attribution _:351930 ; rdf:subject ?pfs16 ; rdf:predicate up:annotation ; rdf:object ?annotation35 . _:351971 a rdf:Statement ; up:source unirule:MF_01022 ; rdf:subject ?pfs41 ; rdf:predicate up:annotation ; rdf:object ?annotation42 . _:351972 a rdf:Statement ; up:attribution _:351931 ; rdf:subject ?pfs41 ; rdf:predicate up:annotation ; rdf:object ?annotation42 . _:351973 a rdf:Statement ; up:source unirule:MF_01022 ; rdf:subject ?pfs47 ; rdf:predicate up:annotation ; rdf:object ?annotation48 . _:351974 a rdf:Statement ; up:attribution _:351932 ; rdf:subject ?pfs47 ; rdf:predicate up:annotation ; rdf:object ?annotation48 . _:351975 a rdf:Statement ; up:source unirule:MF_01022 ; rdf:subject ?pfs53 ; rdf:predicate up:annotation ; rdf:object ?annotation54 . _:351976 a rdf:Statement ; up:attribution _:351933 ; rdf:subject ?pfs53 ; rdf:predicate up:annotation ; rdf:object ?annotation54 . _:351977 a rdf:Statement ; up:source unirule:MF_01022 ; rdf:subject ?pfs59 ; rdf:predicate up:annotation ; rdf:object ?annotation60 . _:351978 a rdf:Statement ; up:attribution _:351934 ; rdf:subject ?pfs59 ; rdf:predicate up:annotation ; rdf:object ?annotation60 . _:351979 a rdf:Statement ; up:source unirule:MF_01022 ; rdf:subject ?pfs65 ; rdf:predicate up:annotation ; rdf:object ?annotation66 . _:351980 a rdf:Statement ; up:attribution _:351935 ; rdf:subject ?pfs65 ; rdf:predicate up:annotation ; rdf:object ?annotation66 . _:351981 a rdf:Statement ; up:source unirule:MF_01022 ; rdf:subject ?pfs72 ; rdf:predicate up:annotation ; rdf:object ?annotation73 . _:351982 a rdf:Statement ; up:attribution _:351936 ; rdf:subject ?pfs72 ; rdf:predicate up:annotation ; rdf:object ?annotation73 . _:351983 a rdf:Statement ; up:source unirule:MF_01022 ; rdf:subject ?pfs79 ; rdf:predicate up:annotation ; rdf:object ?annotation80 . _:351984 a rdf:Statement ; up:attribution _:351937 ; rdf:subject ?pfs79 ; rdf:predicate up:annotation ; rdf:object ?annotation80 . } WHERE { #baseURI: http://purl.uniprot.org/unirule/MF_01022 #Rule MF_01022 Created by:rivoire on:2002-06-14 Modified by:ecastro on:2023-06-01 ?this up:organism ?thisOrganism ; rdfs:seeAlso signature:MF_01022 . ?thisOrganism rdfs:subClassOf+ taxon:2 . BIND(URI(CONCAT(STR(?this), '#MF_01022a0')) AS ?name0) . BIND(URI(CONCAT(STR(?this), '#MF_01022a1')) AS ?namedpart1) . BIND(URI(CONCAT(STR(?this), '#MF_01022a2')) AS ?namedpart2) . BIND(URI(CONCAT(STR(?this), '#MF_01022a4')) AS ?annotation4) . BIND(URI(CONCAT(STR(?this), '#MF_01022a6')) AS ?annotation6) . BIND(URI(CONCAT(STR(?this), '#MF_01022a8')) AS ?annotation8) . BIND(URI(CONCAT(STR(?this), '#MF_01022a9')) AS ?annotation9) . BIND(URI(CONCAT(STR(?this), '#MF_01022a10')) AS ?annotation10) . BIND(URI(CONCAT(STR(?this), '#MF_01022a11')) AS ?annotation11) . BIND(URI(CONCAT(STR(?this), '#MF_01022a13')) AS ?annotation13) . BIND(URI(CONCAT(STR(?this), '#MF_01022a14')) AS ?annotation14) . OPTIONAL { ?this up:sequence ?thisSequence . ?thisSequence rdf:value ?thisSequenceValue . ?templateMotifMatch90 faldo:location ?templateMotifSequenceMatchRegionQ9S5G591 ; edam:is_output_of ?templateMotifSequenceProfileAlignmentOperationQ9S5G593 ; rdf:type edam:data_0869 ; rdf:value ?templateMotifCigarQ9S5G5MF_0102286 . ?templateMotifSequenceMatchRegionQ9S5G591 faldo:begin ?templateMotifSequenceMatchBeginQ9S5G592 . ?templateMotifSequenceMatchBeginQ9S5G592 faldo:position ?templateMotifSequenceMatchBeginPositionQ9S5G587 ; faldo:reference isoform:Q9S5G5-1 . ?templateMotifSequenceProfileAlignmentOperationQ9S5G593 edam:has_input signature:MF_01022 ; rdf:type edam:operation_0300 . ?targetMotifMatch94 faldo:location ?targetMotifMatchRegionMatch95 ; edam:is_output_of ?targetMotifSequenceAlignmentOperationMF_0102297 ; rdf:type edam:data_0869 ; rdf:value ?targetMotifMatchCigarQ9S5G5MF_0102288 . ?targetMotifMatchRegionMatch95 faldo:begin ?targetMotifMatchRegionMatchBeginMF_0102296 . ?targetMotifMatchRegionMatchBeginMF_0102296 faldo:position ?targetMotifMatchRegionMatchBeginPositionMF_0102289 ; faldo:reference ?thisSequence . ?targetMotifSequenceAlignmentOperationMF_0102297 edam:has_input signature:MF_01022 ; rdf:type edam:operation_0300 . BIND(?this AS ?tagFTGRP_1) . BIND(STRLEN(REPLACE(SUBSTR(?templateMotifCigarQ9S5G5MF_0102286, 1, (STRLEN(?templateMotifCigarQ9S5G5MF_0102286) - STRLEN(REPLACE(?templateMotifCigarQ9S5G5MF_0102286, CONCAT('^(?:-*[^-]){', STR(((93 - ?templateMotifSequenceMatchBeginPositionQ9S5G587) + 1)), '}'), '')))), '[a-z]', '')) AS ?step198) . BIND((STRLEN(SUBSTR(?targetMotifMatchCigarQ9S5G5MF_0102288, 1, (STRLEN(?targetMotifMatchCigarQ9S5G5MF_0102288) - STRLEN(REPLACE(?targetMotifMatchCigarQ9S5G5MF_0102288, CONCAT('^(?:[a-z]*(?:[A-Z]|-)){', STR(?step198), '}'), ''))))) - STRLEN(REPLACE(SUBSTR(?targetMotifMatchCigarQ9S5G5MF_0102288, 1, (STRLEN(?targetMotifMatchCigarQ9S5G5MF_0102288) - STRLEN(REPLACE(?targetMotifMatchCigarQ9S5G5MF_0102288, CONCAT('^(?:[a-z]*(?:[A-Z]|-)){', STR(?step198), '}'), '')))), '[^-]', ''))) AS ?step299) . BIND(((?step299 + ?targetMotifMatchRegionMatchBeginPositionMF_0102289) - 1) AS ?thisPositionOn21) . BIND(?thisPositionOn21 AS ?thisPositionOn22) . BIND(?this AS ?pfs1t100) . BIND(URI(CONCAT(STR(?thisSequence), '#position', STR(?thisPositionOn21))) AS ?pfsb18) . BIND(URI(CONCAT(STR(?thisSequence), '#position', STR(?thisPositionOn22))) AS ?pfse19) . FILTER ((SUBSTR(?thisSequenceValue, ?thisPositionOn21, 1) = 'C')) . BIND(STRLEN(REPLACE(SUBSTR(?templateMotifCigarQ9S5G5MF_0102286, 1, (STRLEN(?templateMotifCigarQ9S5G5MF_0102286) - STRLEN(REPLACE(?templateMotifCigarQ9S5G5MF_0102286, CONCAT('^(?:-*[^-]){', STR(((95 - ?templateMotifSequenceMatchBeginPositionQ9S5G587) + 1)), '}'), '')))), '[a-z]', '')) AS ?step1101) . BIND((STRLEN(SUBSTR(?targetMotifMatchCigarQ9S5G5MF_0102288, 1, (STRLEN(?targetMotifMatchCigarQ9S5G5MF_0102288) - STRLEN(REPLACE(?targetMotifMatchCigarQ9S5G5MF_0102288, CONCAT('^(?:[a-z]*(?:[A-Z]|-)){', STR(?step1101), '}'), ''))))) - STRLEN(REPLACE(SUBSTR(?targetMotifMatchCigarQ9S5G5MF_0102288, 1, (STRLEN(?targetMotifMatchCigarQ9S5G5MF_0102288) - STRLEN(REPLACE(?targetMotifMatchCigarQ9S5G5MF_0102288, CONCAT('^(?:[a-z]*(?:[A-Z]|-)){', STR(?step1101), '}'), '')))), '[^-]', ''))) AS ?step2102) . BIND(((?step2102 + ?targetMotifMatchRegionMatchBeginPositionMF_0102289) - 1) AS ?thisPositionOn27) . BIND(?thisPositionOn27 AS ?thisPositionOn28) . BIND(?this AS ?pfs1t103) . BIND(URI(CONCAT(STR(?thisSequence), '#position', STR(?thisPositionOn27))) AS ?pfsb24) . BIND(URI(CONCAT(STR(?thisSequence), '#position', STR(?thisPositionOn28))) AS ?pfse25) . FILTER ((SUBSTR(?thisSequenceValue, ?thisPositionOn27, 1) = 'H')) . BIND(STRLEN(REPLACE(SUBSTR(?templateMotifCigarQ9S5G5MF_0102286, 1, (STRLEN(?templateMotifCigarQ9S5G5MF_0102286) - STRLEN(REPLACE(?templateMotifCigarQ9S5G5MF_0102286, CONCAT('^(?:-*[^-]){', STR(((101 - ?templateMotifSequenceMatchBeginPositionQ9S5G587) + 1)), '}'), '')))), '[a-z]', '')) AS ?step1104) . BIND((STRLEN(SUBSTR(?targetMotifMatchCigarQ9S5G5MF_0102288, 1, (STRLEN(?targetMotifMatchCigarQ9S5G5MF_0102288) - STRLEN(REPLACE(?targetMotifMatchCigarQ9S5G5MF_0102288, CONCAT('^(?:[a-z]*(?:[A-Z]|-)){', STR(?step1104), '}'), ''))))) - STRLEN(REPLACE(SUBSTR(?targetMotifMatchCigarQ9S5G5MF_0102288, 1, (STRLEN(?targetMotifMatchCigarQ9S5G5MF_0102288) - STRLEN(REPLACE(?targetMotifMatchCigarQ9S5G5MF_0102288, CONCAT('^(?:[a-z]*(?:[A-Z]|-)){', STR(?step1104), '}'), '')))), '[^-]', ''))) AS ?step2105) . BIND(((?step2105 + ?targetMotifMatchRegionMatchBeginPositionMF_0102289) - 1) AS ?thisPositionOn33) . BIND(?thisPositionOn33 AS ?thisPositionOn34) . BIND(?this AS ?pfs1t106) . BIND(URI(CONCAT(STR(?thisSequence), '#position', STR(?thisPositionOn33))) AS ?pfsb30) . BIND(URI(CONCAT(STR(?thisSequence), '#position', STR(?thisPositionOn34))) AS ?pfse31) . FILTER ((SUBSTR(?thisSequenceValue, ?thisPositionOn33, 1) = 'C')) . BIND(STRLEN(REPLACE(SUBSTR(?templateMotifCigarQ9S5G5MF_0102286, 1, (STRLEN(?templateMotifCigarQ9S5G5MF_0102286) - STRLEN(REPLACE(?templateMotifCigarQ9S5G5MF_0102286, CONCAT('^(?:-*[^-]){', STR(((103 - ?templateMotifSequenceMatchBeginPositionQ9S5G587) + 1)), '}'), '')))), '[a-z]', '')) AS ?step1107) . BIND((STRLEN(SUBSTR(?targetMotifMatchCigarQ9S5G5MF_0102288, 1, (STRLEN(?targetMotifMatchCigarQ9S5G5MF_0102288) - STRLEN(REPLACE(?targetMotifMatchCigarQ9S5G5MF_0102288, CONCAT('^(?:[a-z]*(?:[A-Z]|-)){', STR(?step1107), '}'), ''))))) - STRLEN(REPLACE(SUBSTR(?targetMotifMatchCigarQ9S5G5MF_0102288, 1, (STRLEN(?targetMotifMatchCigarQ9S5G5MF_0102288) - STRLEN(REPLACE(?targetMotifMatchCigarQ9S5G5MF_0102288, CONCAT('^(?:[a-z]*(?:[A-Z]|-)){', STR(?step1107), '}'), '')))), '[^-]', ''))) AS ?step2108) . BIND(((?step2108 + ?targetMotifMatchRegionMatchBeginPositionMF_0102289) - 1) AS ?thisPositionOn39) . BIND(?thisPositionOn39 AS ?thisPositionOn40) . BIND(?this AS ?pfs1t109) . BIND(URI(CONCAT(STR(?thisSequence), '#position', STR(?thisPositionOn39))) AS ?pfsb36) . BIND(URI(CONCAT(STR(?thisSequence), '#position', STR(?thisPositionOn40))) AS ?pfse37) . FILTER ((SUBSTR(?thisSequenceValue, ?thisPositionOn39, 1) = 'C')) . BIND(?this AS ?pfs16) . } OPTIONAL { ?this up:sequence ?thisSequence . ?thisSequence rdf:value ?thisSequenceValue . ?templateMotifMatch114 faldo:location ?templateMotifSequenceMatchRegionQ9S5G5115 ; edam:is_output_of ?templateMotifSequenceProfileAlignmentOperationQ9S5G5117 ; rdf:type edam:data_0869 ; rdf:value ?templateMotifCigarQ9S5G5MF_01022110 . ?templateMotifSequenceMatchRegionQ9S5G5115 faldo:begin ?templateMotifSequenceMatchBeginQ9S5G5116 . ?templateMotifSequenceMatchBeginQ9S5G5116 faldo:position ?templateMotifSequenceMatchBeginPositionQ9S5G5111 ; faldo:reference isoform:Q9S5G5-1 . ?templateMotifSequenceProfileAlignmentOperationQ9S5G5117 edam:has_input signature:MF_01022 ; rdf:type edam:operation_0300 . ?targetMotifMatch118 faldo:location ?targetMotifMatchRegionMatch119 ; edam:is_output_of ?targetMotifSequenceAlignmentOperationMF_01022121 ; rdf:type edam:data_0869 ; rdf:value ?targetMotifMatchCigarQ9S5G5MF_01022112 . ?targetMotifMatchRegionMatch119 faldo:begin ?targetMotifMatchRegionMatchBeginMF_01022120 . ?targetMotifMatchRegionMatchBeginMF_01022120 faldo:position ?targetMotifMatchRegionMatchBeginPositionMF_01022113 ; faldo:reference ?thisSequence . ?targetMotifSequenceAlignmentOperationMF_01022121 edam:has_input signature:MF_01022 ; rdf:type edam:operation_0300 . BIND(1 AS ?thisPositionOn45) . BIND(STRLEN(REPLACE(SUBSTR(?templateMotifCigarQ9S5G5MF_01022110, 1, (STRLEN(?templateMotifCigarQ9S5G5MF_01022110) - STRLEN(REPLACE(?templateMotifCigarQ9S5G5MF_01022110, CONCAT('^(?:-*[^-]){', STR(((166 - ?templateMotifSequenceMatchBeginPositionQ9S5G5111) + 1)), '}'), '')))), '[a-z]', '')) AS ?step1122) . BIND((STRLEN(SUBSTR(?targetMotifMatchCigarQ9S5G5MF_01022112, 1, (STRLEN(?targetMotifMatchCigarQ9S5G5MF_01022112) - STRLEN(REPLACE(?targetMotifMatchCigarQ9S5G5MF_01022112, CONCAT('^(?:[a-z]*(?:[A-Z]|-)){', STR(?step1122), '}'), ''))))) - STRLEN(REPLACE(SUBSTR(?targetMotifMatchCigarQ9S5G5MF_01022112, 1, (STRLEN(?targetMotifMatchCigarQ9S5G5MF_01022112) - STRLEN(REPLACE(?targetMotifMatchCigarQ9S5G5MF_01022112, CONCAT('^(?:[a-z]*(?:[A-Z]|-)){', STR(?step1122), '}'), '')))), '[^-]', ''))) AS ?step2123) . BIND(((?step2123 + ?targetMotifMatchRegionMatchBeginPositionMF_01022113) - 1) AS ?thisPositionOn46) . BIND(?this AS ?pfs2t124) . BIND(URI(CONCAT(STR(?thisSequence), '#position', STR(?thisPositionOn45))) AS ?pfsb43) . BIND(URI(CONCAT(STR(?thisSequence), '#position', STR(?thisPositionOn46))) AS ?pfse44) . FILTER ((BOUND(?thisPositionOn45) && BOUND(?thisPositionOn46))) . BIND(URI(CONCAT(STR(?this), '#MF_01022a42')) AS ?annotation42) . BIND(?this AS ?pfs41) . } OPTIONAL { ?this up:sequence ?thisSequence . ?thisSequence rdf:value ?thisSequenceValue . ?templateMotifMatch129 faldo:location ?templateMotifSequenceMatchRegionQ9S5G5130 ; edam:is_output_of ?templateMotifSequenceProfileAlignmentOperationQ9S5G5132 ; rdf:type edam:data_0869 ; rdf:value ?templateMotifCigarQ9S5G5MF_01022125 . ?templateMotifSequenceMatchRegionQ9S5G5130 faldo:begin ?templateMotifSequenceMatchBeginQ9S5G5131 . ?templateMotifSequenceMatchBeginQ9S5G5131 faldo:position ?templateMotifSequenceMatchBeginPositionQ9S5G5126 ; faldo:reference isoform:Q9S5G5-1 . ?templateMotifSequenceProfileAlignmentOperationQ9S5G5132 edam:has_input signature:MF_01022 ; rdf:type edam:operation_0300 . ?targetMotifMatch133 faldo:location ?targetMotifMatchRegionMatch134 ; edam:is_output_of ?targetMotifSequenceAlignmentOperationMF_01022136 ; rdf:type edam:data_0869 ; rdf:value ?targetMotifMatchCigarQ9S5G5MF_01022127 . ?targetMotifMatchRegionMatch134 faldo:begin ?targetMotifMatchRegionMatchBeginMF_01022135 . ?targetMotifMatchRegionMatchBeginMF_01022135 faldo:position ?targetMotifMatchRegionMatchBeginPositionMF_01022128 ; faldo:reference ?thisSequence . ?targetMotifSequenceAlignmentOperationMF_01022136 edam:has_input signature:MF_01022 ; rdf:type edam:operation_0300 . BIND(STRLEN(REPLACE(SUBSTR(?templateMotifCigarQ9S5G5MF_01022125, 1, (STRLEN(?templateMotifCigarQ9S5G5MF_01022125) - STRLEN(REPLACE(?templateMotifCigarQ9S5G5MF_01022125, CONCAT('^(?:-*[^-]){', STR(((167 - ?templateMotifSequenceMatchBeginPositionQ9S5G5126) + 1)), '}'), '')))), '[a-z]', '')) AS ?step1137) . BIND((STRLEN(SUBSTR(?targetMotifMatchCigarQ9S5G5MF_01022127, 1, (STRLEN(?targetMotifMatchCigarQ9S5G5MF_01022127) - STRLEN(REPLACE(?targetMotifMatchCigarQ9S5G5MF_01022127, CONCAT('^(?:[a-z]*(?:[A-Z]|-)){', STR(?step1137), '}'), ''))))) - STRLEN(REPLACE(SUBSTR(?targetMotifMatchCigarQ9S5G5MF_01022127, 1, (STRLEN(?targetMotifMatchCigarQ9S5G5MF_01022127) - STRLEN(REPLACE(?targetMotifMatchCigarQ9S5G5MF_01022127, CONCAT('^(?:[a-z]*(?:[A-Z]|-)){', STR(?step1137), '}'), '')))), '[^-]', ''))) AS ?step2138) . BIND(((?step2138 + ?targetMotifMatchRegionMatchBeginPositionMF_01022128) - 1) AS ?thisPositionOn51) . BIND(STRLEN(?thisSequenceValue) AS ?thisPositionOn52) . BIND(?this AS ?pfs2t139) . BIND(URI(CONCAT(STR(?thisSequence), '#position', STR(?thisPositionOn51))) AS ?pfsb49) . BIND(URI(CONCAT(STR(?thisSequence), '#position', STR(?thisPositionOn52))) AS ?pfse50) . FILTER ((BOUND(?thisPositionOn51) && BOUND(?thisPositionOn52))) . BIND(URI(CONCAT(STR(?this), '#MF_01022a48')) AS ?annotation48) . BIND(?this AS ?pfs47) . } OPTIONAL { ?this up:sequence ?thisSequence . ?thisSequence rdf:value ?thisSequenceValue . ?templateMotifMatch144 faldo:location ?templateMotifSequenceMatchRegionQ9S5G5145 ; edam:is_output_of ?templateMotifSequenceProfileAlignmentOperationQ9S5G5147 ; rdf:type edam:data_0869 ; rdf:value ?templateMotifCigarQ9S5G5MF_01022140 . ?templateMotifSequenceMatchRegionQ9S5G5145 faldo:begin ?templateMotifSequenceMatchBeginQ9S5G5146 . ?templateMotifSequenceMatchBeginQ9S5G5146 faldo:position ?templateMotifSequenceMatchBeginPositionQ9S5G5141 ; faldo:reference isoform:Q9S5G5-1 . ?templateMotifSequenceProfileAlignmentOperationQ9S5G5147 edam:has_input signature:MF_01022 ; rdf:type edam:operation_0300 . ?targetMotifMatch148 faldo:location ?targetMotifMatchRegionMatch149 ; edam:is_output_of ?targetMotifSequenceAlignmentOperationMF_01022151 ; rdf:type edam:data_0869 ; rdf:value ?targetMotifMatchCigarQ9S5G5MF_01022142 . ?targetMotifMatchRegionMatch149 faldo:begin ?targetMotifMatchRegionMatchBeginMF_01022150 . ?targetMotifMatchRegionMatchBeginMF_01022150 faldo:position ?targetMotifMatchRegionMatchBeginPositionMF_01022143 ; faldo:reference ?thisSequence . ?targetMotifSequenceAlignmentOperationMF_01022151 edam:has_input signature:MF_01022 ; rdf:type edam:operation_0300 . BIND(STRLEN(REPLACE(SUBSTR(?templateMotifCigarQ9S5G5MF_01022140, 1, (STRLEN(?templateMotifCigarQ9S5G5MF_01022140) - STRLEN(REPLACE(?templateMotifCigarQ9S5G5MF_01022140, CONCAT('^(?:-*[^-]){', STR(((9 - ?templateMotifSequenceMatchBeginPositionQ9S5G5141) + 1)), '}'), '')))), '[a-z]', '')) AS ?step1152) . BIND((STRLEN(SUBSTR(?targetMotifMatchCigarQ9S5G5MF_01022142, 1, (STRLEN(?targetMotifMatchCigarQ9S5G5MF_01022142) - STRLEN(REPLACE(?targetMotifMatchCigarQ9S5G5MF_01022142, CONCAT('^(?:[a-z]*(?:[A-Z]|-)){', STR(?step1152), '}'), ''))))) - STRLEN(REPLACE(SUBSTR(?targetMotifMatchCigarQ9S5G5MF_01022142, 1, (STRLEN(?targetMotifMatchCigarQ9S5G5MF_01022142) - STRLEN(REPLACE(?targetMotifMatchCigarQ9S5G5MF_01022142, CONCAT('^(?:[a-z]*(?:[A-Z]|-)){', STR(?step1152), '}'), '')))), '[^-]', ''))) AS ?step2153) . BIND(((?step2153 + ?targetMotifMatchRegionMatchBeginPositionMF_01022143) - 1) AS ?thisPositionOn57) . BIND(?thisPositionOn57 AS ?thisPositionOn58) . BIND(?this AS ?pfs2t154) . BIND(URI(CONCAT(STR(?thisSequence), '#position', STR(?thisPositionOn57))) AS ?pfsb55) . BIND(URI(CONCAT(STR(?thisSequence), '#position', STR(?thisPositionOn58))) AS ?pfse56) . FILTER ((SUBSTR(?thisSequenceValue, ?thisPositionOn57, 1) = 'D')) . BIND(URI(CONCAT(STR(?this), '#MF_01022a54')) AS ?annotation54) . BIND(?this AS ?pfs53) . } OPTIONAL { ?this up:sequence ?thisSequence . ?thisSequence rdf:value ?thisSequenceValue . ?templateMotifMatch159 faldo:location ?templateMotifSequenceMatchRegionQ9S5G5160 ; edam:is_output_of ?templateMotifSequenceProfileAlignmentOperationQ9S5G5162 ; rdf:type edam:data_0869 ; rdf:value ?templateMotifCigarQ9S5G5MF_01022155 . ?templateMotifSequenceMatchRegionQ9S5G5160 faldo:begin ?templateMotifSequenceMatchBeginQ9S5G5161 . ?templateMotifSequenceMatchBeginQ9S5G5161 faldo:position ?templateMotifSequenceMatchBeginPositionQ9S5G5156 ; faldo:reference isoform:Q9S5G5-1 . ?templateMotifSequenceProfileAlignmentOperationQ9S5G5162 edam:has_input signature:MF_01022 ; rdf:type edam:operation_0300 . ?targetMotifMatch163 faldo:location ?targetMotifMatchRegionMatch164 ; edam:is_output_of ?targetMotifSequenceAlignmentOperationMF_01022166 ; rdf:type edam:data_0869 ; rdf:value ?targetMotifMatchCigarQ9S5G5MF_01022157 . ?targetMotifMatchRegionMatch164 faldo:begin ?targetMotifMatchRegionMatchBeginMF_01022165 . ?targetMotifMatchRegionMatchBeginMF_01022165 faldo:position ?targetMotifMatchRegionMatchBeginPositionMF_01022158 ; faldo:reference ?thisSequence . ?targetMotifSequenceAlignmentOperationMF_01022166 edam:has_input signature:MF_01022 ; rdf:type edam:operation_0300 . BIND(STRLEN(REPLACE(SUBSTR(?templateMotifCigarQ9S5G5MF_01022155, 1, (STRLEN(?templateMotifCigarQ9S5G5MF_01022155) - STRLEN(REPLACE(?templateMotifCigarQ9S5G5MF_01022155, CONCAT('^(?:-*[^-]){', STR(((11 - ?templateMotifSequenceMatchBeginPositionQ9S5G5156) + 1)), '}'), '')))), '[a-z]', '')) AS ?step1167) . BIND((STRLEN(SUBSTR(?targetMotifMatchCigarQ9S5G5MF_01022157, 1, (STRLEN(?targetMotifMatchCigarQ9S5G5MF_01022157) - STRLEN(REPLACE(?targetMotifMatchCigarQ9S5G5MF_01022157, CONCAT('^(?:[a-z]*(?:[A-Z]|-)){', STR(?step1167), '}'), ''))))) - STRLEN(REPLACE(SUBSTR(?targetMotifMatchCigarQ9S5G5MF_01022157, 1, (STRLEN(?targetMotifMatchCigarQ9S5G5MF_01022157) - STRLEN(REPLACE(?targetMotifMatchCigarQ9S5G5MF_01022157, CONCAT('^(?:[a-z]*(?:[A-Z]|-)){', STR(?step1167), '}'), '')))), '[^-]', ''))) AS ?step2168) . BIND(((?step2168 + ?targetMotifMatchRegionMatchBeginPositionMF_01022158) - 1) AS ?thisPositionOn63) . BIND(?thisPositionOn63 AS ?thisPositionOn64) . BIND(?this AS ?pfs2t169) . BIND(URI(CONCAT(STR(?thisSequence), '#position', STR(?thisPositionOn63))) AS ?pfsb61) . BIND(URI(CONCAT(STR(?thisSequence), '#position', STR(?thisPositionOn64))) AS ?pfse62) . FILTER ((SUBSTR(?thisSequenceValue, ?thisPositionOn63, 1) = 'D')) . BIND(URI(CONCAT(STR(?this), '#MF_01022a60')) AS ?annotation60) . BIND(?this AS ?pfs59) . } OPTIONAL { ?this up:sequence ?thisSequence . ?thisSequence rdf:value ?thisSequenceValue . ?templateMotifMatch174 faldo:location ?templateMotifSequenceMatchRegionQ9S5G5175 ; edam:is_output_of ?templateMotifSequenceProfileAlignmentOperationQ9S5G5177 ; rdf:type edam:data_0869 ; rdf:value ?templateMotifCigarQ9S5G5MF_01022170 . ?templateMotifSequenceMatchRegionQ9S5G5175 faldo:begin ?templateMotifSequenceMatchBeginQ9S5G5176 . ?templateMotifSequenceMatchBeginQ9S5G5176 faldo:position ?templateMotifSequenceMatchBeginPositionQ9S5G5171 ; faldo:reference isoform:Q9S5G5-1 . ?templateMotifSequenceProfileAlignmentOperationQ9S5G5177 edam:has_input signature:MF_01022 ; rdf:type edam:operation_0300 . ?targetMotifMatch178 faldo:location ?targetMotifMatchRegionMatch179 ; edam:is_output_of ?targetMotifSequenceAlignmentOperationMF_01022181 ; rdf:type edam:data_0869 ; rdf:value ?targetMotifMatchCigarQ9S5G5MF_01022172 . ?targetMotifMatchRegionMatch179 faldo:begin ?targetMotifMatchRegionMatchBeginMF_01022180 . ?targetMotifMatchRegionMatchBeginMF_01022180 faldo:position ?targetMotifMatchRegionMatchBeginPositionMF_01022173 ; faldo:reference ?thisSequence . ?targetMotifSequenceAlignmentOperationMF_01022181 edam:has_input signature:MF_01022 ; rdf:type edam:operation_0300 . BIND(STRLEN(REPLACE(SUBSTR(?templateMotifCigarQ9S5G5MF_01022170, 1, (STRLEN(?templateMotifCigarQ9S5G5MF_01022170) - STRLEN(REPLACE(?templateMotifCigarQ9S5G5MF_01022170, CONCAT('^(?:-*[^-]){', STR(((9 - ?templateMotifSequenceMatchBeginPositionQ9S5G5171) + 1)), '}'), '')))), '[a-z]', '')) AS ?step1182) . BIND((STRLEN(SUBSTR(?targetMotifMatchCigarQ9S5G5MF_01022172, 1, (STRLEN(?targetMotifMatchCigarQ9S5G5MF_01022172) - STRLEN(REPLACE(?targetMotifMatchCigarQ9S5G5MF_01022172, CONCAT('^(?:[a-z]*(?:[A-Z]|-)){', STR(?step1182), '}'), ''))))) - STRLEN(REPLACE(SUBSTR(?targetMotifMatchCigarQ9S5G5MF_01022172, 1, (STRLEN(?targetMotifMatchCigarQ9S5G5MF_01022172) - STRLEN(REPLACE(?targetMotifMatchCigarQ9S5G5MF_01022172, CONCAT('^(?:[a-z]*(?:[A-Z]|-)){', STR(?step1182), '}'), '')))), '[^-]', ''))) AS ?step2183) . BIND(((?step2183 + ?targetMotifMatchRegionMatchBeginPositionMF_01022173) - 1) AS ?thisPositionOn70) . BIND(?thisPositionOn70 AS ?thisPositionOn71) . BIND(?this AS ?pfs2t184) . BIND(URI(CONCAT(STR(?thisSequence), '#position', STR(?thisPositionOn70))) AS ?pfsb67) . BIND(URI(CONCAT(STR(?thisSequence), '#position', STR(?thisPositionOn71))) AS ?pfse68) . FILTER ((SUBSTR(?thisSequenceValue, ?thisPositionOn70, 1) = 'D')) . BIND(URI(CONCAT(STR(?this), '#MF_01022a66')) AS ?annotation66) . BIND(?this AS ?pfs65) . } OPTIONAL { ?this up:sequence ?thisSequence . ?thisSequence rdf:value ?thisSequenceValue . ?templateMotifMatch189 faldo:location ?templateMotifSequenceMatchRegionQ9S5G5190 ; edam:is_output_of ?templateMotifSequenceProfileAlignmentOperationQ9S5G5192 ; rdf:type edam:data_0869 ; rdf:value ?templateMotifCigarQ9S5G5MF_01022185 . ?templateMotifSequenceMatchRegionQ9S5G5190 faldo:begin ?templateMotifSequenceMatchBeginQ9S5G5191 . ?templateMotifSequenceMatchBeginQ9S5G5191 faldo:position ?templateMotifSequenceMatchBeginPositionQ9S5G5186 ; faldo:reference isoform:Q9S5G5-1 . ?templateMotifSequenceProfileAlignmentOperationQ9S5G5192 edam:has_input signature:MF_01022 ; rdf:type edam:operation_0300 . ?targetMotifMatch193 faldo:location ?targetMotifMatchRegionMatch194 ; edam:is_output_of ?targetMotifSequenceAlignmentOperationMF_01022196 ; rdf:type edam:data_0869 ; rdf:value ?targetMotifMatchCigarQ9S5G5MF_01022187 . ?targetMotifMatchRegionMatch194 faldo:begin ?targetMotifMatchRegionMatchBeginMF_01022195 . ?targetMotifMatchRegionMatchBeginMF_01022195 faldo:position ?targetMotifMatchRegionMatchBeginPositionMF_01022188 ; faldo:reference ?thisSequence . ?targetMotifSequenceAlignmentOperationMF_01022196 edam:has_input signature:MF_01022 ; rdf:type edam:operation_0300 . BIND(STRLEN(REPLACE(SUBSTR(?templateMotifCigarQ9S5G5MF_01022185, 1, (STRLEN(?templateMotifCigarQ9S5G5MF_01022185) - STRLEN(REPLACE(?templateMotifCigarQ9S5G5MF_01022185, CONCAT('^(?:-*[^-]){', STR(((11 - ?templateMotifSequenceMatchBeginPositionQ9S5G5186) + 1)), '}'), '')))), '[a-z]', '')) AS ?step1197) . BIND((STRLEN(SUBSTR(?targetMotifMatchCigarQ9S5G5MF_01022187, 1, (STRLEN(?targetMotifMatchCigarQ9S5G5MF_01022187) - STRLEN(REPLACE(?targetMotifMatchCigarQ9S5G5MF_01022187, CONCAT('^(?:[a-z]*(?:[A-Z]|-)){', STR(?step1197), '}'), ''))))) - STRLEN(REPLACE(SUBSTR(?targetMotifMatchCigarQ9S5G5MF_01022187, 1, (STRLEN(?targetMotifMatchCigarQ9S5G5MF_01022187) - STRLEN(REPLACE(?targetMotifMatchCigarQ9S5G5MF_01022187, CONCAT('^(?:[a-z]*(?:[A-Z]|-)){', STR(?step1197), '}'), '')))), '[^-]', ''))) AS ?step2198) . BIND(((?step2198 + ?targetMotifMatchRegionMatchBeginPositionMF_01022188) - 1) AS ?thisPositionOn77) . BIND(?thisPositionOn77 AS ?thisPositionOn78) . BIND(?this AS ?pfs2t199) . BIND(URI(CONCAT(STR(?thisSequence), '#position', STR(?thisPositionOn77))) AS ?pfsb74) . BIND(URI(CONCAT(STR(?thisSequence), '#position', STR(?thisPositionOn78))) AS ?pfse75) . FILTER ((SUBSTR(?thisSequenceValue, ?thisPositionOn77, 1) = 'D')) . BIND(URI(CONCAT(STR(?this), '#MF_01022a73')) AS ?annotation73) . BIND(?this AS ?pfs72) . } OPTIONAL { ?this up:sequence ?thisSequence . ?thisSequence rdf:value ?thisSequenceValue . ?templateMotifMatch204 faldo:location ?templateMotifSequenceMatchRegionQ9S5G5205 ; edam:is_output_of ?templateMotifSequenceProfileAlignmentOperationQ9S5G5207 ; rdf:type edam:data_0869 ; rdf:value ?templateMotifCigarQ9S5G5MF_01022200 . ?templateMotifSequenceMatchRegionQ9S5G5205 faldo:begin ?templateMotifSequenceMatchBeginQ9S5G5206 . ?templateMotifSequenceMatchBeginQ9S5G5206 faldo:position ?templateMotifSequenceMatchBeginPositionQ9S5G5201 ; faldo:reference isoform:Q9S5G5-1 . ?templateMotifSequenceProfileAlignmentOperationQ9S5G5207 edam:has_input signature:MF_01022 ; rdf:type edam:operation_0300 . ?targetMotifMatch208 faldo:location ?targetMotifMatchRegionMatch209 ; edam:is_output_of ?targetMotifSequenceAlignmentOperationMF_01022211 ; rdf:type edam:data_0869 ; rdf:value ?targetMotifMatchCigarQ9S5G5MF_01022202 . ?targetMotifMatchRegionMatch209 faldo:begin ?targetMotifMatchRegionMatchBeginMF_01022210 . ?targetMotifMatchRegionMatchBeginMF_01022210 faldo:position ?targetMotifMatchRegionMatchBeginPositionMF_01022203 ; faldo:reference ?thisSequence . ?targetMotifSequenceAlignmentOperationMF_01022211 edam:has_input signature:MF_01022 ; rdf:type edam:operation_0300 . BIND(STRLEN(REPLACE(SUBSTR(?templateMotifCigarQ9S5G5MF_01022200, 1, (STRLEN(?templateMotifCigarQ9S5G5MF_01022200) - STRLEN(REPLACE(?templateMotifCigarQ9S5G5MF_01022200, CONCAT('^(?:-*[^-]){', STR(((130 - ?templateMotifSequenceMatchBeginPositionQ9S5G5201) + 1)), '}'), '')))), '[a-z]', '')) AS ?step1212) . BIND((STRLEN(SUBSTR(?targetMotifMatchCigarQ9S5G5MF_01022202, 1, (STRLEN(?targetMotifMatchCigarQ9S5G5MF_01022202) - STRLEN(REPLACE(?targetMotifMatchCigarQ9S5G5MF_01022202, CONCAT('^(?:[a-z]*(?:[A-Z]|-)){', STR(?step1212), '}'), ''))))) - STRLEN(REPLACE(SUBSTR(?targetMotifMatchCigarQ9S5G5MF_01022202, 1, (STRLEN(?targetMotifMatchCigarQ9S5G5MF_01022202) - STRLEN(REPLACE(?targetMotifMatchCigarQ9S5G5MF_01022202, CONCAT('^(?:[a-z]*(?:[A-Z]|-)){', STR(?step1212), '}'), '')))), '[^-]', ''))) AS ?step2213) . BIND(((?step2213 + ?targetMotifMatchRegionMatchBeginPositionMF_01022203) - 1) AS ?thisPositionOn84) . BIND(?thisPositionOn84 AS ?thisPositionOn85) . BIND(?this AS ?pfs2t214) . BIND(URI(CONCAT(STR(?thisSequence), '#position', STR(?thisPositionOn84))) AS ?pfsb81) . BIND(URI(CONCAT(STR(?thisSequence), '#position', STR(?thisPositionOn85))) AS ?pfse82) . FILTER ((SUBSTR(?thisSequenceValue, ?thisPositionOn84, 1) = 'D')) . BIND(URI(CONCAT(STR(?this), '#MF_01022a80')) AS ?annotation80) . BIND(?this AS ?pfs79) . } OPTIONAL { ?this a up:Protein . BIND(?this AS ?caseWithTag215) . } BIND(IF(BOUND(?tagFTGRP_1), ?caseWithTag215, ?UNBOUND_VARIABLE) AS ?case15) . }