CONSTRUCT { _:690991 up:source unirule:MF_01983 . _:690992 up:source unirule:MF_01983 . _:690993 up:source unirule:MF_01983 . _:690994 up:source unirule:MF_01983 . _:690995 up:source unirule:MF_01983 . _:690996 up:source unirule:MF_01983 . _:690997 up:source unirule:MF_01983 . _:690998 up:source unirule:MF_01983 . _:690999 up:source unirule:MF_01983 . _:691000 up:source unirule:MF_01983 . _:691001 up:source unirule:MF_01983 . _:691002 up:source unirule:MF_01983 . _:691003 up:source unirule:MF_01983 . _:691004 up:source unirule:MF_01983 . _:691005 up:source unirule:MF_01983 . _:691006 up:source unirule:MF_01983 . _:691007 up:source unirule:MF_01983 . _:691008 up:source unirule:MF_01983 . _:691009 up:source unirule:MF_01983 . _:691010 up:source unirule:MF_01983 . _:691011 up:source unirule:MF_01983 . _:691012 up:source unirule:MF_01983 . _:691013 up:source unirule:MF_01983 . _:691014 up:source unirule:MF_01983 . _:691015 up:source unirule:MF_01983 . _:691016 up:source unirule:MF_01983 . _:691017 up:source unirule:MF_01983 . _:691018 up:source unirule:MF_01983 . _:691019 up:source unirule:MF_01983 . _:691020 up:source unirule:MF_01983 . _:691021 up:source unirule:MF_01983 . _:691022 up:source unirule:MF_01983 . ?this up:annotation ?annotation1 , ?annotation2 , ?annotation4 , ?annotation6 , ?annotation7 , ?annotation8 , ?annotation9 , ?annotation10 ; up:classifiedWith GO:0016831 , keyword:210 , keyword:285 , keyword:288 , keyword:456 , keyword:464 , keyword:479 , keyword:58 , keyword:630 ; up:recommendedName ?name0 . ?name0 up:ecName '4.1.1.93' ; up:fullName 'Pyrrole-2-carboxylic acid decarboxylase' ; up:shortName 'P2C decarboxylase' ; rdf:type up:Structured_Name . ?annotation1 a up:Function_Annotation ; rdfs:comment 'Catalyzes the prenyl-FMN-dependent decarboxylation of pyrrole-2-carboxylate (P2C). Can also catalyze the carboxylation of pyrrole in the presence of elevated concentrations of CO(2) or bicarbonate.' . ?annotation2 up:activity ?activity3 ; rdf:type up:Catalytic_Activity_Annotation . ?activity3 up:catalyticActivity <http://rdf.rhea-db.org/31375>; up:enzymeClass <http://purl.uniprot.org/enzyme/4.1.1.93>. ?annotation4 up:activity ?activity5 ; rdf:type up:Catalytic_Activity_Annotation . ?activity5 up:catalyticActivity <http://rdf.rhea-db.org/31379>; up:enzymeClass <http://purl.uniprot.org/enzyme/4.1.1.93>. ?annotation6 up:cofactor chebi:87746 ; rdf:type up:Cofactor_Annotation ; rdfs:comment 'Binds 1 prenylated FMN (prenyl-FMN) per subunit.' . ?annotation7 up:cofactor chebi:29035 ; rdf:type up:Cofactor_Annotation ; rdfs:comment 'Binds 1 Mn(2+) per subunit.' . ?annotation8 up:cofactor chebi:29103 ; rdf:type up:Cofactor_Annotation ; rdfs:comment 'Binds 1 K(+) per subunit.' . ?annotation9 a up:Subunit_Annotation ; rdfs:comment 'Homodimer.' . ?annotation10 a up:Similarity_Annotation ; rdfs:comment 'Belongs to the UbiD family. UbiD-like/FDC subfamily.' . ?pfs11 up:annotation ?annotation12 . ?annotation12 faldo:begin ?pfsb13 ; faldo:end ?pfse14 ; rdf:type up:Active_Site_Annotation ; rdfs:comment 'Proton donor' . ?pfsb13 faldo:position ?thisPositionOn15 ; rdf:type faldo:ExactPosition . ?pfse14 faldo:position ?thisPositionOn16 ; rdf:type faldo:ExactPosition . ?pfs17 up:annotation ?annotation18 . ?annotation18 faldo:begin ?pfsb19 ; faldo:end ?pfse20 ; up:ligand ?ligand21 ; rdf:type up:Binding_Site_Annotation . ?pfsb19 faldo:position ?thisPositionOn22 ; rdf:type faldo:ExactPosition . ?pfse20 faldo:position ?thisPositionOn23 ; rdf:type faldo:ExactPosition . ?ligand21 rdfs:subClassOf chebi:29103 . ?pfs24 up:annotation ?annotation25 . ?annotation25 faldo:begin ?pfsb26 ; faldo:end ?pfse27 ; up:ligand ?ligand28 ; rdf:type up:Binding_Site_Annotation . ?pfsb26 faldo:position ?thisPositionOn29 ; rdf:type faldo:ExactPosition . ?pfse27 faldo:position ?thisPositionOn30 ; rdf:type faldo:ExactPosition . ?ligand28 rdfs:subClassOf chebi:87746 . ?pfs31 up:annotation ?annotation32 . ?annotation32 faldo:begin ?pfsb33 ; faldo:end ?pfse34 ; up:ligand ?ligand35 ; rdf:type up:Binding_Site_Annotation . ?pfsb33 faldo:position ?thisPositionOn36 ; rdf:type faldo:ExactPosition . ?pfse34 faldo:position ?thisPositionOn37 ; rdf:type faldo:ExactPosition . ?ligand35 rdfs:subClassOf chebi:87746 . ?pfs38 up:annotation ?annotation39 . ?annotation39 faldo:begin ?pfsb40 ; faldo:end ?pfse41 ; up:ligand ?ligand42 ; rdf:type up:Binding_Site_Annotation . ?pfsb40 faldo:position ?thisPositionOn43 ; rdf:type faldo:ExactPosition . ?pfse41 faldo:position ?thisPositionOn44 ; rdf:type faldo:ExactPosition . ?ligand42 rdfs:subClassOf chebi:87746 . ?pfs45 up:annotation ?annotation46 . ?annotation46 faldo:begin ?pfsb47 ; faldo:end ?pfse48 ; up:ligand ?ligand49 ; rdf:type up:Binding_Site_Annotation . ?pfsb47 faldo:position ?thisPositionOn50 ; rdf:type faldo:ExactPosition . ?pfse48 faldo:position ?thisPositionOn51 ; rdf:type faldo:ExactPosition . ?ligand49 rdfs:subClassOf chebi:29035 . ?pfs52 up:annotation ?annotation53 . ?annotation53 faldo:begin ?pfsb54 ; faldo:end ?pfse55 ; up:ligand ?ligand56 ; rdf:type up:Binding_Site_Annotation . ?pfsb54 faldo:position ?thisPositionOn57 ; rdf:type faldo:ExactPosition . ?pfse55 faldo:position ?thisPositionOn58 ; rdf:type faldo:ExactPosition . ?ligand56 rdfs:subClassOf chebi:87746 . ?pfs59 up:annotation ?annotation60 . ?annotation60 faldo:begin ?pfsb61 ; faldo:end ?pfse62 ; up:ligand ?ligand63 ; rdf:type up:Binding_Site_Annotation . ?pfsb61 faldo:position ?thisPositionOn64 ; rdf:type faldo:ExactPosition . ?pfse62 faldo:position ?thisPositionOn65 ; rdf:type faldo:ExactPosition . ?ligand63 rdfs:subClassOf chebi:29103 . ?pfs66 up:annotation ?annotation67 . ?annotation67 faldo:begin ?pfsb68 ; faldo:end ?pfse69 ; up:ligand ?ligand70 ; rdf:type up:Binding_Site_Annotation . ?pfsb68 faldo:position ?thisPositionOn71 ; rdf:type faldo:ExactPosition . ?pfse69 faldo:position ?thisPositionOn72 ; rdf:type faldo:ExactPosition . ?ligand70 rdfs:subClassOf chebi:29103 . ?pfs73 up:annotation ?annotation74 . ?annotation74 faldo:begin ?pfsb75 ; faldo:end ?pfse76 ; up:ligand ?ligand77 ; rdf:type up:Binding_Site_Annotation . ?pfsb75 faldo:position ?thisPositionOn78 ; rdf:type faldo:ExactPosition . ?pfse76 faldo:position ?thisPositionOn79 ; rdf:type faldo:ExactPosition . ?ligand77 rdfs:subClassOf chebi:29103 . ?pfs80 up:annotation ?annotation81 . ?annotation81 faldo:begin ?pfsb82 ; faldo:end ?pfse83 ; up:ligand ?ligand84 ; rdf:type up:Binding_Site_Annotation . ?pfsb82 faldo:position ?thisPositionOn85 ; rdf:type faldo:ExactPosition . ?pfse83 faldo:position ?thisPositionOn86 ; rdf:type faldo:ExactPosition . ?ligand84 rdfs:subClassOf chebi:29103 . ?pfs87 up:annotation ?annotation88 . ?annotation88 faldo:begin ?pfsb89 ; faldo:end ?pfse90 ; up:ligand ?ligand91 ; rdf:type up:Binding_Site_Annotation . ?pfsb89 faldo:position ?thisPositionOn92 ; rdf:type faldo:ExactPosition . ?pfse90 faldo:position ?thisPositionOn93 ; rdf:type faldo:ExactPosition . ?ligand91 rdfs:subClassOf chebi:29035 . ?pfs94 up:annotation ?annotation95 . ?annotation95 faldo:begin ?pfsb96 ; faldo:end ?pfse97 ; up:ligand ?ligand98 ; rdf:type up:Binding_Site_Annotation . ?pfsb96 faldo:position ?thisPositionOn99 ; rdf:type faldo:ExactPosition . ?pfse97 faldo:position ?thisPositionOn100 ; rdf:type faldo:ExactPosition . ?ligand98 rdfs:subClassOf chebi:87746 . ?pfs101 up:annotation ?annotation102 . ?annotation102 faldo:begin ?pfsb103 ; faldo:end ?pfse104 ; up:ligand ?ligand105 ; rdf:type up:Binding_Site_Annotation . ?pfsb103 faldo:position ?thisPositionOn106 ; rdf:type faldo:ExactPosition . ?pfse104 faldo:position ?thisPositionOn107 ; rdf:type faldo:ExactPosition . ?ligand105 rdfs:subClassOf chebi:87746 . _:691023 a rdf:Statement ; up:attribution _:690991 ; rdf:subject ?this ; rdf:predicate up:recommendedName ; rdf:object ?name0 . _:691024 a rdf:Statement ; up:attribution _:690992 ; rdf:subject ?this ; rdf:predicate up:annotation ; rdf:object ?annotation1 . _:691025 a rdf:Statement ; up:attribution _:690993 ; rdf:subject ?this ; rdf:predicate up:annotation ; rdf:object ?annotation2 . _:691026 a rdf:Statement ; up:attribution _:690994 ; rdf:subject ?this ; rdf:predicate up:annotation ; rdf:object ?annotation4 . _:691027 a rdf:Statement ; up:attribution _:690995 ; rdf:subject ?this ; rdf:predicate up:annotation ; rdf:object ?annotation6 . _:691028 a rdf:Statement ; up:attribution _:690996 ; rdf:subject ?this ; rdf:predicate up:annotation ; rdf:object ?annotation7 . _:691029 a rdf:Statement ; up:attribution _:690997 ; rdf:subject ?this ; rdf:predicate up:annotation ; rdf:object ?annotation8 . _:691030 a rdf:Statement ; up:attribution _:690998 ; rdf:subject ?this ; rdf:predicate up:annotation ; rdf:object ?annotation9 . _:691031 a rdf:Statement ; up:attribution _:690999 ; rdf:subject ?this ; rdf:predicate up:annotation ; rdf:object ?annotation10 . _:691032 a rdf:Statement ; up:attribution _:691000 ; rdf:subject ?this ; rdf:predicate up:classifiedWith ; rdf:object keyword:58 . _:691033 a rdf:Statement ; up:attribution _:691001 ; rdf:subject ?this ; rdf:predicate up:classifiedWith ; rdf:object keyword:210 . _:691034 a rdf:Statement ; up:attribution _:691002 ; rdf:subject ?this ; rdf:predicate up:classifiedWith ; rdf:object keyword:288 . _:691035 a rdf:Statement ; up:attribution _:691003 ; rdf:subject ?this ; rdf:predicate up:classifiedWith ; rdf:object keyword:285 . _:691036 a rdf:Statement ; up:attribution _:691004 ; rdf:subject ?this ; rdf:predicate up:classifiedWith ; rdf:object keyword:456 . _:691037 a rdf:Statement ; up:attribution _:691005 ; rdf:subject ?this ; rdf:predicate up:classifiedWith ; rdf:object keyword:464 . _:691038 a rdf:Statement ; up:attribution _:691006 ; rdf:subject ?this ; rdf:predicate up:classifiedWith ; rdf:object keyword:479 . _:691039 a rdf:Statement ; up:attribution _:691007 ; rdf:subject ?this ; rdf:predicate up:classifiedWith ; rdf:object keyword:630 . _:691040 a rdf:Statement ; up:attribution _:691008 ; rdf:subject ?this ; rdf:predicate up:classifiedWith ; rdf:object GO:0016831 . _:691041 a rdf:Statement ; up:source unirule:MF_01983 ; rdf:subject ?pfs11 ; rdf:predicate up:annotation ; rdf:object ?annotation12 . _:691042 a rdf:Statement ; up:attribution _:691009 ; rdf:subject ?pfs11 ; rdf:predicate up:annotation ; rdf:object ?annotation12 . _:691043 a rdf:Statement ; up:source unirule:MF_01983 ; rdf:subject ?pfs17 ; rdf:predicate up:annotation ; rdf:object ?annotation18 . _:691044 a rdf:Statement ; up:attribution _:691010 ; rdf:subject ?pfs17 ; rdf:predicate up:annotation ; rdf:object ?annotation18 . _:691045 a rdf:Statement ; up:source unirule:MF_01983 ; rdf:subject ?pfs24 ; rdf:predicate up:annotation ; rdf:object ?annotation25 . _:691046 a rdf:Statement ; up:attribution _:691011 ; rdf:subject ?pfs24 ; rdf:predicate up:annotation ; rdf:object ?annotation25 . _:691047 a rdf:Statement ; up:source unirule:MF_01983 ; rdf:subject ?pfs31 ; rdf:predicate up:annotation ; rdf:object ?annotation32 . _:691048 a rdf:Statement ; up:attribution _:691012 ; rdf:subject ?pfs31 ; rdf:predicate up:annotation ; rdf:object ?annotation32 . _:691049 a rdf:Statement ; up:source unirule:MF_01983 ; rdf:subject ?pfs38 ; rdf:predicate up:annotation ; rdf:object ?annotation39 . _:691050 a rdf:Statement ; up:attribution _:691013 ; rdf:subject ?pfs38 ; rdf:predicate up:annotation ; rdf:object ?annotation39 . _:691051 a rdf:Statement ; up:source unirule:MF_01983 ; rdf:subject ?pfs45 ; rdf:predicate up:annotation ; rdf:object ?annotation46 . _:691052 a rdf:Statement ; up:attribution _:691014 ; rdf:subject ?pfs45 ; rdf:predicate up:annotation ; rdf:object ?annotation46 . _:691053 a rdf:Statement ; up:source unirule:MF_01983 ; rdf:subject ?pfs52 ; rdf:predicate up:annotation ; rdf:object ?annotation53 . _:691054 a rdf:Statement ; up:attribution _:691015 ; rdf:subject ?pfs52 ; rdf:predicate up:annotation ; rdf:object ?annotation53 . _:691055 a rdf:Statement ; up:source unirule:MF_01983 ; rdf:subject ?pfs59 ; rdf:predicate up:annotation ; rdf:object ?annotation60 . _:691056 a rdf:Statement ; up:attribution _:691016 ; rdf:subject ?pfs59 ; rdf:predicate up:annotation ; rdf:object ?annotation60 . _:691057 a rdf:Statement ; up:source unirule:MF_01983 ; rdf:subject ?pfs66 ; rdf:predicate up:annotation ; rdf:object ?annotation67 . _:691058 a rdf:Statement ; up:attribution _:691017 ; rdf:subject ?pfs66 ; rdf:predicate up:annotation ; rdf:object ?annotation67 . _:691059 a rdf:Statement ; up:source unirule:MF_01983 ; rdf:subject ?pfs73 ; rdf:predicate up:annotation ; rdf:object ?annotation74 . _:691060 a rdf:Statement ; up:attribution _:691018 ; rdf:subject ?pfs73 ; rdf:predicate up:annotation ; rdf:object ?annotation74 . _:691061 a rdf:Statement ; up:source unirule:MF_01983 ; rdf:subject ?pfs80 ; rdf:predicate up:annotation ; rdf:object ?annotation81 . _:691062 a rdf:Statement ; up:attribution _:691019 ; rdf:subject ?pfs80 ; rdf:predicate up:annotation ; rdf:object ?annotation81 . _:691063 a rdf:Statement ; up:source unirule:MF_01983 ; rdf:subject ?pfs87 ; rdf:predicate up:annotation ; rdf:object ?annotation88 . _:691064 a rdf:Statement ; up:attribution _:691020 ; rdf:subject ?pfs87 ; rdf:predicate up:annotation ; rdf:object ?annotation88 . _:691065 a rdf:Statement ; up:source unirule:MF_01983 ; rdf:subject ?pfs94 ; rdf:predicate up:annotation ; rdf:object ?annotation95 . _:691066 a rdf:Statement ; up:attribution _:691021 ; rdf:subject ?pfs94 ; rdf:predicate up:annotation ; rdf:object ?annotation95 . _:691067 a rdf:Statement ; up:source unirule:MF_01983 ; rdf:subject ?pfs101 ; rdf:predicate up:annotation ; rdf:object ?annotation102 . _:691068 a rdf:Statement ; up:attribution _:691022 ; rdf:subject ?pfs101 ; rdf:predicate up:annotation ; rdf:object ?annotation102 . } WHERE { #baseURI: http://purl.uniprot.org/unirule/MF_01983 #Rule MF_01983 Created by:ipedruzz on:2015-09-01 Modified by:ecastro on:2023-06-01 ?this up:organism ?thisOrganism ; rdfs:seeAlso signature:MF_01983 . ?thisOrganism rdfs:subClassOf+ taxon:2 . BIND(URI(CONCAT(STR(?this), '#MF_01983a0')) AS ?name0) . BIND(URI(CONCAT(STR(?this), '#MF_01983a1')) AS ?annotation1) . BIND(URI(CONCAT(STR(?this), '#MF_01983a2')) AS ?annotation2) . BIND(URI(CONCAT(STR(?this), '#MF_01983a4')) AS ?annotation4) . BIND(URI(CONCAT(STR(?this), '#MF_01983a6')) AS ?annotation6) . BIND(URI(CONCAT(STR(?this), '#MF_01983a7')) AS ?annotation7) . BIND(URI(CONCAT(STR(?this), '#MF_01983a8')) AS ?annotation8) . BIND(URI(CONCAT(STR(?this), '#MF_01983a9')) AS ?annotation9) . BIND(URI(CONCAT(STR(?this), '#MF_01983a10')) AS ?annotation10) . OPTIONAL { ?this up:sequence ?thisSequence . ?thisSequence rdf:value ?thisSequenceValue . ?templateMotifMatch112 faldo:location ?templateMotifSequenceMatchRegionQ9I6N5113 ; edam:is_output_of ?templateMotifSequenceProfileAlignmentOperationQ9I6N5115 ; rdf:type edam:data_0869 ; rdf:value ?templateMotifCigarQ9I6N5MF_01983108 . ?templateMotifSequenceMatchRegionQ9I6N5113 faldo:begin ?templateMotifSequenceMatchBeginQ9I6N5114 . ?templateMotifSequenceMatchBeginQ9I6N5114 faldo:position ?templateMotifSequenceMatchBeginPositionQ9I6N5109 ; faldo:reference isoform:Q9I6N5-1 . ?templateMotifSequenceProfileAlignmentOperationQ9I6N5115 edam:has_input signature:MF_01983 ; rdf:type edam:operation_0300 . ?targetMotifMatch116 faldo:location ?targetMotifMatchRegionMatch117 ; edam:is_output_of ?targetMotifSequenceAlignmentOperationMF_01983119 ; rdf:type edam:data_0869 ; rdf:value ?targetMotifMatchCigarQ9I6N5MF_01983110 . ?targetMotifMatchRegionMatch117 faldo:begin ?targetMotifMatchRegionMatchBeginMF_01983118 . ?targetMotifMatchRegionMatchBeginMF_01983118 faldo:position ?targetMotifMatchRegionMatchBeginPositionMF_01983111 ; faldo:reference ?thisSequence . ?targetMotifSequenceAlignmentOperationMF_01983119 edam:has_input signature:MF_01983 ; rdf:type edam:operation_0300 . BIND(STRLEN(REPLACE(SUBSTR(?templateMotifCigarQ9I6N5MF_01983108, 1, (STRLEN(?templateMotifCigarQ9I6N5MF_01983108) - STRLEN(REPLACE(?templateMotifCigarQ9I6N5MF_01983108, CONCAT('^(?:-*[^-]){', STR(((278 - ?templateMotifSequenceMatchBeginPositionQ9I6N5109) + 1)), '}'), '')))), '[a-z]', '')) AS ?step1120) . BIND((STRLEN(SUBSTR(?targetMotifMatchCigarQ9I6N5MF_01983110, 1, (STRLEN(?targetMotifMatchCigarQ9I6N5MF_01983110) - STRLEN(REPLACE(?targetMotifMatchCigarQ9I6N5MF_01983110, CONCAT('^(?:[a-z]*(?:[A-Z]|-)){', STR(?step1120), '}'), ''))))) - STRLEN(REPLACE(SUBSTR(?targetMotifMatchCigarQ9I6N5MF_01983110, 1, (STRLEN(?targetMotifMatchCigarQ9I6N5MF_01983110) - STRLEN(REPLACE(?targetMotifMatchCigarQ9I6N5MF_01983110, CONCAT('^(?:[a-z]*(?:[A-Z]|-)){', STR(?step1120), '}'), '')))), '[^-]', ''))) AS ?step2121) . BIND(((?step2121 + ?targetMotifMatchRegionMatchBeginPositionMF_01983111) - 1) AS ?thisPositionOn15) . BIND(?thisPositionOn15 AS ?thisPositionOn16) . BIND(?this AS ?pfs1t122) . BIND(URI(CONCAT(STR(?thisSequence), '#position', STR(?thisPositionOn15))) AS ?pfsb13) . BIND(URI(CONCAT(STR(?thisSequence), '#position', STR(?thisPositionOn16))) AS ?pfse14) . FILTER ((SUBSTR(?thisSequenceValue, ?thisPositionOn15, 1) = 'E')) . BIND(URI(CONCAT(STR(?this), '#MF_01983a12')) AS ?annotation12) . BIND(?this AS ?pfs11) . } OPTIONAL { ?this up:sequence ?thisSequence . ?thisSequence rdf:value ?thisSequenceValue . ?templateMotifMatch127 faldo:location ?templateMotifSequenceMatchRegionQ9I6N5128 ; edam:is_output_of ?templateMotifSequenceProfileAlignmentOperationQ9I6N5130 ; rdf:type edam:data_0869 ; rdf:value ?templateMotifCigarQ9I6N5MF_01983123 . ?templateMotifSequenceMatchRegionQ9I6N5128 faldo:begin ?templateMotifSequenceMatchBeginQ9I6N5129 . ?templateMotifSequenceMatchBeginQ9I6N5129 faldo:position ?templateMotifSequenceMatchBeginPositionQ9I6N5124 ; faldo:reference isoform:Q9I6N5-1 . ?templateMotifSequenceProfileAlignmentOperationQ9I6N5130 edam:has_input signature:MF_01983 ; rdf:type edam:operation_0300 . ?targetMotifMatch131 faldo:location ?targetMotifMatchRegionMatch132 ; edam:is_output_of ?targetMotifSequenceAlignmentOperationMF_01983134 ; rdf:type edam:data_0869 ; rdf:value ?targetMotifMatchCigarQ9I6N5MF_01983125 . ?targetMotifMatchRegionMatch132 faldo:begin ?targetMotifMatchRegionMatchBeginMF_01983133 . ?targetMotifMatchRegionMatchBeginMF_01983133 faldo:position ?targetMotifMatchRegionMatchBeginPositionMF_01983126 ; faldo:reference ?thisSequence . ?targetMotifSequenceAlignmentOperationMF_01983134 edam:has_input signature:MF_01983 ; rdf:type edam:operation_0300 . BIND(STRLEN(REPLACE(SUBSTR(?templateMotifCigarQ9I6N5MF_01983123, 1, (STRLEN(?templateMotifCigarQ9I6N5MF_01983123) - STRLEN(REPLACE(?templateMotifCigarQ9I6N5MF_01983123, CONCAT('^(?:-*[^-]){', STR(((166 - ?templateMotifSequenceMatchBeginPositionQ9I6N5124) + 1)), '}'), '')))), '[a-z]', '')) AS ?step1135) . BIND((STRLEN(SUBSTR(?targetMotifMatchCigarQ9I6N5MF_01983125, 1, (STRLEN(?targetMotifMatchCigarQ9I6N5MF_01983125) - STRLEN(REPLACE(?targetMotifMatchCigarQ9I6N5MF_01983125, CONCAT('^(?:[a-z]*(?:[A-Z]|-)){', STR(?step1135), '}'), ''))))) - STRLEN(REPLACE(SUBSTR(?targetMotifMatchCigarQ9I6N5MF_01983125, 1, (STRLEN(?targetMotifMatchCigarQ9I6N5MF_01983125) - STRLEN(REPLACE(?targetMotifMatchCigarQ9I6N5MF_01983125, CONCAT('^(?:[a-z]*(?:[A-Z]|-)){', STR(?step1135), '}'), '')))), '[^-]', ''))) AS ?step2136) . BIND(((?step2136 + ?targetMotifMatchRegionMatchBeginPositionMF_01983126) - 1) AS ?thisPositionOn22) . BIND(?thisPositionOn22 AS ?thisPositionOn23) . BIND(?this AS ?pfs1t137) . BIND(URI(CONCAT(STR(?thisSequence), '#position', STR(?thisPositionOn22))) AS ?pfsb19) . BIND(URI(CONCAT(STR(?thisSequence), '#position', STR(?thisPositionOn23))) AS ?pfse20) . FILTER ((SUBSTR(?thisSequenceValue, ?thisPositionOn22, 1) = 'W')) . BIND(URI(CONCAT(STR(?this), '#MF_01983a18')) AS ?annotation18) . BIND(?this AS ?pfs17) . } OPTIONAL { ?this up:sequence ?thisSequence . ?thisSequence rdf:value ?thisSequenceValue . ?templateMotifMatch142 faldo:location ?templateMotifSequenceMatchRegionQ9I6N5143 ; edam:is_output_of ?templateMotifSequenceProfileAlignmentOperationQ9I6N5145 ; rdf:type edam:data_0869 ; rdf:value ?templateMotifCigarQ9I6N5MF_01983138 . ?templateMotifSequenceMatchRegionQ9I6N5143 faldo:begin ?templateMotifSequenceMatchBeginQ9I6N5144 . ?templateMotifSequenceMatchBeginQ9I6N5144 faldo:position ?templateMotifSequenceMatchBeginPositionQ9I6N5139 ; faldo:reference isoform:Q9I6N5-1 . ?templateMotifSequenceProfileAlignmentOperationQ9I6N5145 edam:has_input signature:MF_01983 ; rdf:type edam:operation_0300 . ?targetMotifMatch146 faldo:location ?targetMotifMatchRegionMatch147 ; edam:is_output_of ?targetMotifSequenceAlignmentOperationMF_01983149 ; rdf:type edam:data_0869 ; rdf:value ?targetMotifMatchCigarQ9I6N5MF_01983140 . ?targetMotifMatchRegionMatch147 faldo:begin ?targetMotifMatchRegionMatchBeginMF_01983148 . ?targetMotifMatchRegionMatchBeginMF_01983148 faldo:position ?targetMotifMatchRegionMatchBeginPositionMF_01983141 ; faldo:reference ?thisSequence . ?targetMotifSequenceAlignmentOperationMF_01983149 edam:has_input signature:MF_01983 ; rdf:type edam:operation_0300 . BIND(STRLEN(REPLACE(SUBSTR(?templateMotifCigarQ9I6N5MF_01983138, 1, (STRLEN(?templateMotifCigarQ9I6N5MF_01983138) - STRLEN(REPLACE(?templateMotifCigarQ9I6N5MF_01983138, CONCAT('^(?:-*[^-]){', STR(((168 - ?templateMotifSequenceMatchBeginPositionQ9I6N5139) + 1)), '}'), '')))), '[a-z]', '')) AS ?step1150) . BIND((STRLEN(SUBSTR(?targetMotifMatchCigarQ9I6N5MF_01983140, 1, (STRLEN(?targetMotifMatchCigarQ9I6N5MF_01983140) - STRLEN(REPLACE(?targetMotifMatchCigarQ9I6N5MF_01983140, CONCAT('^(?:[a-z]*(?:[A-Z]|-)){', STR(?step1150), '}'), ''))))) - STRLEN(REPLACE(SUBSTR(?targetMotifMatchCigarQ9I6N5MF_01983140, 1, (STRLEN(?targetMotifMatchCigarQ9I6N5MF_01983140) - STRLEN(REPLACE(?targetMotifMatchCigarQ9I6N5MF_01983140, CONCAT('^(?:[a-z]*(?:[A-Z]|-)){', STR(?step1150), '}'), '')))), '[^-]', ''))) AS ?step2151) . BIND(((?step2151 + ?targetMotifMatchRegionMatchBeginPositionMF_01983141) - 1) AS ?thisPositionOn29) . BIND(?thisPositionOn29 AS ?thisPositionOn30) . BIND(?this AS ?pfs1t152) . BIND(URI(CONCAT(STR(?thisSequence), '#position', STR(?thisPositionOn29))) AS ?pfsb26) . BIND(URI(CONCAT(STR(?thisSequence), '#position', STR(?thisPositionOn30))) AS ?pfse27) . FILTER ((SUBSTR(?thisSequenceValue, ?thisPositionOn29, 1) = 'V')) . BIND(URI(CONCAT(STR(?this), '#MF_01983a25')) AS ?annotation25) . BIND(?this AS ?pfs24) . } OPTIONAL { ?this up:sequence ?thisSequence . ?thisSequence rdf:value ?thisSequenceValue . ?templateMotifMatch157 faldo:location ?templateMotifSequenceMatchRegionQ9I6N5158 ; edam:is_output_of ?templateMotifSequenceProfileAlignmentOperationQ9I6N5160 ; rdf:type edam:data_0869 ; rdf:value ?templateMotifCigarQ9I6N5MF_01983153 . ?templateMotifSequenceMatchRegionQ9I6N5158 faldo:begin ?templateMotifSequenceMatchBeginQ9I6N5159 . ?templateMotifSequenceMatchBeginQ9I6N5159 faldo:position ?templateMotifSequenceMatchBeginPositionQ9I6N5154 ; faldo:reference isoform:Q9I6N5-1 . ?templateMotifSequenceProfileAlignmentOperationQ9I6N5160 edam:has_input signature:MF_01983 ; rdf:type edam:operation_0300 . ?targetMotifMatch161 faldo:location ?targetMotifMatchRegionMatch162 ; edam:is_output_of ?targetMotifSequenceAlignmentOperationMF_01983164 ; rdf:type edam:data_0869 ; rdf:value ?targetMotifMatchCigarQ9I6N5MF_01983155 . ?targetMotifMatchRegionMatch162 faldo:begin ?targetMotifMatchRegionMatchBeginMF_01983163 . ?targetMotifMatchRegionMatchBeginMF_01983163 faldo:position ?targetMotifMatchRegionMatchBeginPositionMF_01983156 ; faldo:reference ?thisSequence . ?targetMotifSequenceAlignmentOperationMF_01983164 edam:has_input signature:MF_01983 ; rdf:type edam:operation_0300 . BIND(STRLEN(REPLACE(SUBSTR(?templateMotifCigarQ9I6N5MF_01983153, 1, (STRLEN(?templateMotifCigarQ9I6N5MF_01983153) - STRLEN(REPLACE(?templateMotifCigarQ9I6N5MF_01983153, CONCAT('^(?:-*[^-]){', STR(((170 - ?templateMotifSequenceMatchBeginPositionQ9I6N5154) + 1)), '}'), '')))), '[a-z]', '')) AS ?step1165) . BIND((STRLEN(SUBSTR(?targetMotifMatchCigarQ9I6N5MF_01983155, 1, (STRLEN(?targetMotifMatchCigarQ9I6N5MF_01983155) - STRLEN(REPLACE(?targetMotifMatchCigarQ9I6N5MF_01983155, CONCAT('^(?:[a-z]*(?:[A-Z]|-)){', STR(?step1165), '}'), ''))))) - STRLEN(REPLACE(SUBSTR(?targetMotifMatchCigarQ9I6N5MF_01983155, 1, (STRLEN(?targetMotifMatchCigarQ9I6N5MF_01983155) - STRLEN(REPLACE(?targetMotifMatchCigarQ9I6N5MF_01983155, CONCAT('^(?:[a-z]*(?:[A-Z]|-)){', STR(?step1165), '}'), '')))), '[^-]', ''))) AS ?step2166) . BIND(((?step2166 + ?targetMotifMatchRegionMatchBeginPositionMF_01983156) - 1) AS ?thisPositionOn36) . BIND(?thisPositionOn36 AS ?thisPositionOn37) . BIND(?this AS ?pfs1t167) . BIND(URI(CONCAT(STR(?thisSequence), '#position', STR(?thisPositionOn36))) AS ?pfsb33) . BIND(URI(CONCAT(STR(?thisSequence), '#position', STR(?thisPositionOn37))) AS ?pfse34) . FILTER ((SUBSTR(?thisSequenceValue, ?thisPositionOn36, 1) = 'R')) . BIND(URI(CONCAT(STR(?this), '#MF_01983a32')) AS ?annotation32) . BIND(?this AS ?pfs31) . } OPTIONAL { ?this up:sequence ?thisSequence . ?thisSequence rdf:value ?thisSequenceValue . ?templateMotifMatch172 faldo:location ?templateMotifSequenceMatchRegionQ9I6N5173 ; edam:is_output_of ?templateMotifSequenceProfileAlignmentOperationQ9I6N5175 ; rdf:type edam:data_0869 ; rdf:value ?templateMotifCigarQ9I6N5MF_01983168 . ?templateMotifSequenceMatchRegionQ9I6N5173 faldo:begin ?templateMotifSequenceMatchBeginQ9I6N5174 . ?templateMotifSequenceMatchBeginQ9I6N5174 faldo:position ?templateMotifSequenceMatchBeginPositionQ9I6N5169 ; faldo:reference isoform:Q9I6N5-1 . ?templateMotifSequenceProfileAlignmentOperationQ9I6N5175 edam:has_input signature:MF_01983 ; rdf:type edam:operation_0300 . ?targetMotifMatch176 faldo:location ?targetMotifMatchRegionMatch177 ; edam:is_output_of ?targetMotifSequenceAlignmentOperationMF_01983179 ; rdf:type edam:data_0869 ; rdf:value ?targetMotifMatchCigarQ9I6N5MF_01983170 . ?targetMotifMatchRegionMatch177 faldo:begin ?targetMotifMatchRegionMatchBeginMF_01983178 . ?targetMotifMatchRegionMatchBeginMF_01983178 faldo:position ?targetMotifMatchRegionMatchBeginPositionMF_01983171 ; faldo:reference ?thisSequence . ?targetMotifSequenceAlignmentOperationMF_01983179 edam:has_input signature:MF_01983 ; rdf:type edam:operation_0300 . BIND(STRLEN(REPLACE(SUBSTR(?templateMotifCigarQ9I6N5MF_01983168, 1, (STRLEN(?templateMotifCigarQ9I6N5MF_01983168) - STRLEN(REPLACE(?templateMotifCigarQ9I6N5MF_01983168, CONCAT('^(?:-*[^-]){', STR(((187 - ?templateMotifSequenceMatchBeginPositionQ9I6N5169) + 1)), '}'), '')))), '[a-z]', '')) AS ?step1180) . BIND((STRLEN(SUBSTR(?targetMotifMatchCigarQ9I6N5MF_01983170, 1, (STRLEN(?targetMotifMatchCigarQ9I6N5MF_01983170) - STRLEN(REPLACE(?targetMotifMatchCigarQ9I6N5MF_01983170, CONCAT('^(?:[a-z]*(?:[A-Z]|-)){', STR(?step1180), '}'), ''))))) - STRLEN(REPLACE(SUBSTR(?targetMotifMatchCigarQ9I6N5MF_01983170, 1, (STRLEN(?targetMotifMatchCigarQ9I6N5MF_01983170) - STRLEN(REPLACE(?targetMotifMatchCigarQ9I6N5MF_01983170, CONCAT('^(?:[a-z]*(?:[A-Z]|-)){', STR(?step1180), '}'), '')))), '[^-]', ''))) AS ?step2181) . BIND(((?step2181 + ?targetMotifMatchRegionMatchBeginPositionMF_01983171) - 1) AS ?thisPositionOn43) . BIND(?thisPositionOn43 AS ?thisPositionOn44) . BIND(?this AS ?pfs1t182) . BIND(URI(CONCAT(STR(?thisSequence), '#position', STR(?thisPositionOn43))) AS ?pfsb40) . BIND(URI(CONCAT(STR(?thisSequence), '#position', STR(?thisPositionOn44))) AS ?pfse41) . FILTER ((SUBSTR(?thisSequenceValue, ?thisPositionOn43, 1) = 'Q')) . BIND(URI(CONCAT(STR(?this), '#MF_01983a39')) AS ?annotation39) . BIND(?this AS ?pfs38) . } OPTIONAL { ?this up:sequence ?thisSequence . ?thisSequence rdf:value ?thisSequenceValue . ?templateMotifMatch187 faldo:location ?templateMotifSequenceMatchRegionQ9I6N5188 ; edam:is_output_of ?templateMotifSequenceProfileAlignmentOperationQ9I6N5190 ; rdf:type edam:data_0869 ; rdf:value ?templateMotifCigarQ9I6N5MF_01983183 . ?templateMotifSequenceMatchRegionQ9I6N5188 faldo:begin ?templateMotifSequenceMatchBeginQ9I6N5189 . ?templateMotifSequenceMatchBeginQ9I6N5189 faldo:position ?templateMotifSequenceMatchBeginPositionQ9I6N5184 ; faldo:reference isoform:Q9I6N5-1 . ?templateMotifSequenceProfileAlignmentOperationQ9I6N5190 edam:has_input signature:MF_01983 ; rdf:type edam:operation_0300 . ?targetMotifMatch191 faldo:location ?targetMotifMatchRegionMatch192 ; edam:is_output_of ?targetMotifSequenceAlignmentOperationMF_01983194 ; rdf:type edam:data_0869 ; rdf:value ?targetMotifMatchCigarQ9I6N5MF_01983185 . ?targetMotifMatchRegionMatch192 faldo:begin ?targetMotifMatchRegionMatchBeginMF_01983193 . ?targetMotifMatchRegionMatchBeginMF_01983193 faldo:position ?targetMotifMatchRegionMatchBeginPositionMF_01983186 ; faldo:reference ?thisSequence . ?targetMotifSequenceAlignmentOperationMF_01983194 edam:has_input signature:MF_01983 ; rdf:type edam:operation_0300 . BIND(STRLEN(REPLACE(SUBSTR(?templateMotifCigarQ9I6N5MF_01983183, 1, (STRLEN(?templateMotifCigarQ9I6N5MF_01983183) - STRLEN(REPLACE(?templateMotifCigarQ9I6N5MF_01983183, CONCAT('^(?:-*[^-]){', STR(((188 - ?templateMotifSequenceMatchBeginPositionQ9I6N5184) + 1)), '}'), '')))), '[a-z]', '')) AS ?step1195) . BIND((STRLEN(SUBSTR(?targetMotifMatchCigarQ9I6N5MF_01983185, 1, (STRLEN(?targetMotifMatchCigarQ9I6N5MF_01983185) - STRLEN(REPLACE(?targetMotifMatchCigarQ9I6N5MF_01983185, CONCAT('^(?:[a-z]*(?:[A-Z]|-)){', STR(?step1195), '}'), ''))))) - STRLEN(REPLACE(SUBSTR(?targetMotifMatchCigarQ9I6N5MF_01983185, 1, (STRLEN(?targetMotifMatchCigarQ9I6N5MF_01983185) - STRLEN(REPLACE(?targetMotifMatchCigarQ9I6N5MF_01983185, CONCAT('^(?:[a-z]*(?:[A-Z]|-)){', STR(?step1195), '}'), '')))), '[^-]', ''))) AS ?step2196) . BIND(((?step2196 + ?targetMotifMatchRegionMatchBeginPositionMF_01983186) - 1) AS ?thisPositionOn50) . BIND(?thisPositionOn50 AS ?thisPositionOn51) . BIND(?this AS ?pfs1t197) . BIND(URI(CONCAT(STR(?thisSequence), '#position', STR(?thisPositionOn50))) AS ?pfsb47) . BIND(URI(CONCAT(STR(?thisSequence), '#position', STR(?thisPositionOn51))) AS ?pfse48) . FILTER ((SUBSTR(?thisSequenceValue, ?thisPositionOn50, 1) = 'H')) . BIND(URI(CONCAT(STR(?this), '#MF_01983a46')) AS ?annotation46) . BIND(?this AS ?pfs45) . } OPTIONAL { ?this up:sequence ?thisSequence . ?thisSequence rdf:value ?thisSequenceValue . ?templateMotifMatch202 faldo:location ?templateMotifSequenceMatchRegionQ9I6N5203 ; edam:is_output_of ?templateMotifSequenceProfileAlignmentOperationQ9I6N5205 ; rdf:type edam:data_0869 ; rdf:value ?templateMotifCigarQ9I6N5MF_01983198 . ?templateMotifSequenceMatchRegionQ9I6N5203 faldo:begin ?templateMotifSequenceMatchBeginQ9I6N5204 . ?templateMotifSequenceMatchBeginQ9I6N5204 faldo:position ?templateMotifSequenceMatchBeginPositionQ9I6N5199 ; faldo:reference isoform:Q9I6N5-1 . ?templateMotifSequenceProfileAlignmentOperationQ9I6N5205 edam:has_input signature:MF_01983 ; rdf:type edam:operation_0300 . ?targetMotifMatch206 faldo:location ?targetMotifMatchRegionMatch207 ; edam:is_output_of ?targetMotifSequenceAlignmentOperationMF_01983209 ; rdf:type edam:data_0869 ; rdf:value ?targetMotifMatchCigarQ9I6N5MF_01983200 . ?targetMotifMatchRegionMatch207 faldo:begin ?targetMotifMatchRegionMatchBeginMF_01983208 . ?targetMotifMatchRegionMatchBeginMF_01983208 faldo:position ?targetMotifMatchRegionMatchBeginPositionMF_01983201 ; faldo:reference ?thisSequence . ?targetMotifSequenceAlignmentOperationMF_01983209 edam:has_input signature:MF_01983 ; rdf:type edam:operation_0300 . BIND(STRLEN(REPLACE(SUBSTR(?templateMotifCigarQ9I6N5MF_01983198, 1, (STRLEN(?templateMotifCigarQ9I6N5MF_01983198) - STRLEN(REPLACE(?templateMotifCigarQ9I6N5MF_01983198, CONCAT('^(?:-*[^-]){', STR(((188 - ?templateMotifSequenceMatchBeginPositionQ9I6N5199) + 1)), '}'), '')))), '[a-z]', '')) AS ?step1210) . BIND((STRLEN(SUBSTR(?targetMotifMatchCigarQ9I6N5MF_01983200, 1, (STRLEN(?targetMotifMatchCigarQ9I6N5MF_01983200) - STRLEN(REPLACE(?targetMotifMatchCigarQ9I6N5MF_01983200, CONCAT('^(?:[a-z]*(?:[A-Z]|-)){', STR(?step1210), '}'), ''))))) - STRLEN(REPLACE(SUBSTR(?targetMotifMatchCigarQ9I6N5MF_01983200, 1, (STRLEN(?targetMotifMatchCigarQ9I6N5MF_01983200) - STRLEN(REPLACE(?targetMotifMatchCigarQ9I6N5MF_01983200, CONCAT('^(?:[a-z]*(?:[A-Z]|-)){', STR(?step1210), '}'), '')))), '[^-]', ''))) AS ?step2211) . BIND(((?step2211 + ?targetMotifMatchRegionMatchBeginPositionMF_01983201) - 1) AS ?thisPositionOn57) . BIND(?thisPositionOn57 AS ?thisPositionOn58) . BIND(?this AS ?pfs1t212) . BIND(URI(CONCAT(STR(?thisSequence), '#position', STR(?thisPositionOn57))) AS ?pfsb54) . BIND(URI(CONCAT(STR(?thisSequence), '#position', STR(?thisPositionOn58))) AS ?pfse55) . FILTER ((SUBSTR(?thisSequenceValue, ?thisPositionOn57, 1) = 'H')) . BIND(URI(CONCAT(STR(?this), '#MF_01983a53')) AS ?annotation53) . BIND(?this AS ?pfs52) . } OPTIONAL { ?this up:sequence ?thisSequence . ?thisSequence rdf:value ?thisSequenceValue . ?templateMotifMatch217 faldo:location ?templateMotifSequenceMatchRegionQ9I6N5218 ; edam:is_output_of ?templateMotifSequenceProfileAlignmentOperationQ9I6N5220 ; rdf:type edam:data_0869 ; rdf:value ?templateMotifCigarQ9I6N5MF_01983213 . ?templateMotifSequenceMatchRegionQ9I6N5218 faldo:begin ?templateMotifSequenceMatchBeginQ9I6N5219 . ?templateMotifSequenceMatchBeginQ9I6N5219 faldo:position ?templateMotifSequenceMatchBeginPositionQ9I6N5214 ; faldo:reference isoform:Q9I6N5-1 . ?templateMotifSequenceProfileAlignmentOperationQ9I6N5220 edam:has_input signature:MF_01983 ; rdf:type edam:operation_0300 . ?targetMotifMatch221 faldo:location ?targetMotifMatchRegionMatch222 ; edam:is_output_of ?targetMotifSequenceAlignmentOperationMF_01983224 ; rdf:type edam:data_0869 ; rdf:value ?targetMotifMatchCigarQ9I6N5MF_01983215 . ?targetMotifMatchRegionMatch222 faldo:begin ?targetMotifMatchRegionMatchBeginMF_01983223 . ?targetMotifMatchRegionMatchBeginMF_01983223 faldo:position ?targetMotifMatchRegionMatchBeginPositionMF_01983216 ; faldo:reference ?thisSequence . ?targetMotifSequenceAlignmentOperationMF_01983224 edam:has_input signature:MF_01983 ; rdf:type edam:operation_0300 . BIND(STRLEN(REPLACE(SUBSTR(?templateMotifCigarQ9I6N5MF_01983213, 1, (STRLEN(?templateMotifCigarQ9I6N5MF_01983213) - STRLEN(REPLACE(?templateMotifCigarQ9I6N5MF_01983213, CONCAT('^(?:-*[^-]){', STR(((218 - ?templateMotifSequenceMatchBeginPositionQ9I6N5214) + 1)), '}'), '')))), '[a-z]', '')) AS ?step1225) . BIND((STRLEN(SUBSTR(?targetMotifMatchCigarQ9I6N5MF_01983215, 1, (STRLEN(?targetMotifMatchCigarQ9I6N5MF_01983215) - STRLEN(REPLACE(?targetMotifMatchCigarQ9I6N5MF_01983215, CONCAT('^(?:[a-z]*(?:[A-Z]|-)){', STR(?step1225), '}'), ''))))) - STRLEN(REPLACE(SUBSTR(?targetMotifMatchCigarQ9I6N5MF_01983215, 1, (STRLEN(?targetMotifMatchCigarQ9I6N5MF_01983215) - STRLEN(REPLACE(?targetMotifMatchCigarQ9I6N5MF_01983215, CONCAT('^(?:[a-z]*(?:[A-Z]|-)){', STR(?step1225), '}'), '')))), '[^-]', ''))) AS ?step2226) . BIND(((?step2226 + ?targetMotifMatchRegionMatchBeginPositionMF_01983216) - 1) AS ?thisPositionOn64) . BIND(?thisPositionOn64 AS ?thisPositionOn65) . BIND(?this AS ?pfs1t227) . BIND(URI(CONCAT(STR(?thisSequence), '#position', STR(?thisPositionOn64))) AS ?pfsb61) . BIND(URI(CONCAT(STR(?thisSequence), '#position', STR(?thisPositionOn65))) AS ?pfse62) . FILTER ((SUBSTR(?thisSequenceValue, ?thisPositionOn64, 1) = 'A')) . BIND(URI(CONCAT(STR(?this), '#MF_01983a60')) AS ?annotation60) . BIND(?this AS ?pfs59) . } OPTIONAL { ?this up:sequence ?thisSequence . ?thisSequence rdf:value ?thisSequenceValue . ?templateMotifMatch232 faldo:location ?templateMotifSequenceMatchRegionQ9I6N5233 ; edam:is_output_of ?templateMotifSequenceProfileAlignmentOperationQ9I6N5235 ; rdf:type edam:data_0869 ; rdf:value ?templateMotifCigarQ9I6N5MF_01983228 . ?templateMotifSequenceMatchRegionQ9I6N5233 faldo:begin ?templateMotifSequenceMatchBeginQ9I6N5234 . ?templateMotifSequenceMatchBeginQ9I6N5234 faldo:position ?templateMotifSequenceMatchBeginPositionQ9I6N5229 ; faldo:reference isoform:Q9I6N5-1 . ?templateMotifSequenceProfileAlignmentOperationQ9I6N5235 edam:has_input signature:MF_01983 ; rdf:type edam:operation_0300 . ?targetMotifMatch236 faldo:location ?targetMotifMatchRegionMatch237 ; edam:is_output_of ?targetMotifSequenceAlignmentOperationMF_01983239 ; rdf:type edam:data_0869 ; rdf:value ?targetMotifMatchCigarQ9I6N5MF_01983230 . ?targetMotifMatchRegionMatch237 faldo:begin ?targetMotifMatchRegionMatchBeginMF_01983238 . ?targetMotifMatchRegionMatchBeginMF_01983238 faldo:position ?targetMotifMatchRegionMatchBeginPositionMF_01983231 ; faldo:reference ?thisSequence . ?targetMotifSequenceAlignmentOperationMF_01983239 edam:has_input signature:MF_01983 ; rdf:type edam:operation_0300 . BIND(STRLEN(REPLACE(SUBSTR(?templateMotifCigarQ9I6N5MF_01983228, 1, (STRLEN(?templateMotifCigarQ9I6N5MF_01983228) - STRLEN(REPLACE(?templateMotifCigarQ9I6N5MF_01983228, CONCAT('^(?:-*[^-]){', STR(((219 - ?templateMotifSequenceMatchBeginPositionQ9I6N5229) + 1)), '}'), '')))), '[a-z]', '')) AS ?step1240) . BIND((STRLEN(SUBSTR(?targetMotifMatchCigarQ9I6N5MF_01983230, 1, (STRLEN(?targetMotifMatchCigarQ9I6N5MF_01983230) - STRLEN(REPLACE(?targetMotifMatchCigarQ9I6N5MF_01983230, CONCAT('^(?:[a-z]*(?:[A-Z]|-)){', STR(?step1240), '}'), ''))))) - STRLEN(REPLACE(SUBSTR(?targetMotifMatchCigarQ9I6N5MF_01983230, 1, (STRLEN(?targetMotifMatchCigarQ9I6N5MF_01983230) - STRLEN(REPLACE(?targetMotifMatchCigarQ9I6N5MF_01983230, CONCAT('^(?:[a-z]*(?:[A-Z]|-)){', STR(?step1240), '}'), '')))), '[^-]', ''))) AS ?step2241) . BIND(((?step2241 + ?targetMotifMatchRegionMatchBeginPositionMF_01983231) - 1) AS ?thisPositionOn71) . BIND(?thisPositionOn71 AS ?thisPositionOn72) . BIND(?this AS ?pfs1t242) . BIND(URI(CONCAT(STR(?thisSequence), '#position', STR(?thisPositionOn71))) AS ?pfsb68) . BIND(URI(CONCAT(STR(?thisSequence), '#position', STR(?thisPositionOn72))) AS ?pfse69) . FILTER ((SUBSTR(?thisSequenceValue, ?thisPositionOn71, 1) = 'A')) . BIND(URI(CONCAT(STR(?this), '#MF_01983a67')) AS ?annotation67) . BIND(?this AS ?pfs66) . } OPTIONAL { ?this up:sequence ?thisSequence . ?thisSequence rdf:value ?thisSequenceValue . ?templateMotifMatch247 faldo:location ?templateMotifSequenceMatchRegionQ9I6N5248 ; edam:is_output_of ?templateMotifSequenceProfileAlignmentOperationQ9I6N5250 ; rdf:type edam:data_0869 ; rdf:value ?templateMotifCigarQ9I6N5MF_01983243 . ?templateMotifSequenceMatchRegionQ9I6N5248 faldo:begin ?templateMotifSequenceMatchBeginQ9I6N5249 . ?templateMotifSequenceMatchBeginQ9I6N5249 faldo:position ?templateMotifSequenceMatchBeginPositionQ9I6N5244 ; faldo:reference isoform:Q9I6N5-1 . ?templateMotifSequenceProfileAlignmentOperationQ9I6N5250 edam:has_input signature:MF_01983 ; rdf:type edam:operation_0300 . ?targetMotifMatch251 faldo:location ?targetMotifMatchRegionMatch252 ; edam:is_output_of ?targetMotifSequenceAlignmentOperationMF_01983254 ; rdf:type edam:data_0869 ; rdf:value ?targetMotifMatchCigarQ9I6N5MF_01983245 . ?targetMotifMatchRegionMatch252 faldo:begin ?targetMotifMatchRegionMatchBeginMF_01983253 . ?targetMotifMatchRegionMatchBeginMF_01983253 faldo:position ?targetMotifMatchRegionMatchBeginPositionMF_01983246 ; faldo:reference ?thisSequence . ?targetMotifSequenceAlignmentOperationMF_01983254 edam:has_input signature:MF_01983 ; rdf:type edam:operation_0300 . BIND(STRLEN(REPLACE(SUBSTR(?templateMotifCigarQ9I6N5MF_01983243, 1, (STRLEN(?templateMotifCigarQ9I6N5MF_01983243) - STRLEN(REPLACE(?templateMotifCigarQ9I6N5MF_01983243, CONCAT('^(?:-*[^-]){', STR(((221 - ?templateMotifSequenceMatchBeginPositionQ9I6N5244) + 1)), '}'), '')))), '[a-z]', '')) AS ?step1255) . BIND((STRLEN(SUBSTR(?targetMotifMatchCigarQ9I6N5MF_01983245, 1, (STRLEN(?targetMotifMatchCigarQ9I6N5MF_01983245) - STRLEN(REPLACE(?targetMotifMatchCigarQ9I6N5MF_01983245, CONCAT('^(?:[a-z]*(?:[A-Z]|-)){', STR(?step1255), '}'), ''))))) - STRLEN(REPLACE(SUBSTR(?targetMotifMatchCigarQ9I6N5MF_01983245, 1, (STRLEN(?targetMotifMatchCigarQ9I6N5MF_01983245) - STRLEN(REPLACE(?targetMotifMatchCigarQ9I6N5MF_01983245, CONCAT('^(?:[a-z]*(?:[A-Z]|-)){', STR(?step1255), '}'), '')))), '[^-]', ''))) AS ?step2256) . BIND(((?step2256 + ?targetMotifMatchRegionMatchBeginPositionMF_01983246) - 1) AS ?thisPositionOn78) . BIND(?thisPositionOn78 AS ?thisPositionOn79) . BIND(?this AS ?pfs1t257) . BIND(URI(CONCAT(STR(?thisSequence), '#position', STR(?thisPositionOn78))) AS ?pfsb75) . BIND(URI(CONCAT(STR(?thisSequence), '#position', STR(?thisPositionOn79))) AS ?pfse76) . FILTER ((SUBSTR(?thisSequenceValue, ?thisPositionOn78, 1) = 'M')) . BIND(URI(CONCAT(STR(?this), '#MF_01983a74')) AS ?annotation74) . BIND(?this AS ?pfs73) . } OPTIONAL { ?this up:sequence ?thisSequence . ?thisSequence rdf:value ?thisSequenceValue . ?templateMotifMatch262 faldo:location ?templateMotifSequenceMatchRegionQ9I6N5263 ; edam:is_output_of ?templateMotifSequenceProfileAlignmentOperationQ9I6N5265 ; rdf:type edam:data_0869 ; rdf:value ?templateMotifCigarQ9I6N5MF_01983258 . ?templateMotifSequenceMatchRegionQ9I6N5263 faldo:begin ?templateMotifSequenceMatchBeginQ9I6N5264 . ?templateMotifSequenceMatchBeginQ9I6N5264 faldo:position ?templateMotifSequenceMatchBeginPositionQ9I6N5259 ; faldo:reference isoform:Q9I6N5-1 . ?templateMotifSequenceProfileAlignmentOperationQ9I6N5265 edam:has_input signature:MF_01983 ; rdf:type edam:operation_0300 . ?targetMotifMatch266 faldo:location ?targetMotifMatchRegionMatch267 ; edam:is_output_of ?targetMotifSequenceAlignmentOperationMF_01983269 ; rdf:type edam:data_0869 ; rdf:value ?targetMotifMatchCigarQ9I6N5MF_01983260 . ?targetMotifMatchRegionMatch267 faldo:begin ?targetMotifMatchRegionMatchBeginMF_01983268 . ?targetMotifMatchRegionMatchBeginMF_01983268 faldo:position ?targetMotifMatchRegionMatchBeginPositionMF_01983261 ; faldo:reference ?thisSequence . ?targetMotifSequenceAlignmentOperationMF_01983269 edam:has_input signature:MF_01983 ; rdf:type edam:operation_0300 . BIND(STRLEN(REPLACE(SUBSTR(?templateMotifCigarQ9I6N5MF_01983258, 1, (STRLEN(?templateMotifCigarQ9I6N5MF_01983258) - STRLEN(REPLACE(?templateMotifCigarQ9I6N5MF_01983258, CONCAT('^(?:-*[^-]){', STR(((229 - ?templateMotifSequenceMatchBeginPositionQ9I6N5259) + 1)), '}'), '')))), '[a-z]', '')) AS ?step1270) . BIND((STRLEN(SUBSTR(?targetMotifMatchCigarQ9I6N5MF_01983260, 1, (STRLEN(?targetMotifMatchCigarQ9I6N5MF_01983260) - STRLEN(REPLACE(?targetMotifMatchCigarQ9I6N5MF_01983260, CONCAT('^(?:[a-z]*(?:[A-Z]|-)){', STR(?step1270), '}'), ''))))) - STRLEN(REPLACE(SUBSTR(?targetMotifMatchCigarQ9I6N5MF_01983260, 1, (STRLEN(?targetMotifMatchCigarQ9I6N5MF_01983260) - STRLEN(REPLACE(?targetMotifMatchCigarQ9I6N5MF_01983260, CONCAT('^(?:[a-z]*(?:[A-Z]|-)){', STR(?step1270), '}'), '')))), '[^-]', ''))) AS ?step2271) . BIND(((?step2271 + ?targetMotifMatchRegionMatchBeginPositionMF_01983261) - 1) AS ?thisPositionOn85) . BIND(?thisPositionOn85 AS ?thisPositionOn86) . BIND(?this AS ?pfs1t272) . BIND(URI(CONCAT(STR(?thisSequence), '#position', STR(?thisPositionOn85))) AS ?pfsb82) . BIND(URI(CONCAT(STR(?thisSequence), '#position', STR(?thisPositionOn86))) AS ?pfse83) . FILTER ((SUBSTR(?thisSequenceValue, ?thisPositionOn85, 1) = 'E')) . BIND(URI(CONCAT(STR(?this), '#MF_01983a81')) AS ?annotation81) . BIND(?this AS ?pfs80) . } OPTIONAL { ?this up:sequence ?thisSequence . ?thisSequence rdf:value ?thisSequenceValue . ?templateMotifMatch277 faldo:location ?templateMotifSequenceMatchRegionQ9I6N5278 ; edam:is_output_of ?templateMotifSequenceProfileAlignmentOperationQ9I6N5280 ; rdf:type edam:data_0869 ; rdf:value ?templateMotifCigarQ9I6N5MF_01983273 . ?templateMotifSequenceMatchRegionQ9I6N5278 faldo:begin ?templateMotifSequenceMatchBeginQ9I6N5279 . ?templateMotifSequenceMatchBeginQ9I6N5279 faldo:position ?templateMotifSequenceMatchBeginPositionQ9I6N5274 ; faldo:reference isoform:Q9I6N5-1 . ?templateMotifSequenceProfileAlignmentOperationQ9I6N5280 edam:has_input signature:MF_01983 ; rdf:type edam:operation_0300 . ?targetMotifMatch281 faldo:location ?targetMotifMatchRegionMatch282 ; edam:is_output_of ?targetMotifSequenceAlignmentOperationMF_01983284 ; rdf:type edam:data_0869 ; rdf:value ?targetMotifMatchCigarQ9I6N5MF_01983275 . ?targetMotifMatchRegionMatch282 faldo:begin ?targetMotifMatchRegionMatchBeginMF_01983283 . ?targetMotifMatchRegionMatchBeginMF_01983283 faldo:position ?targetMotifMatchRegionMatchBeginPositionMF_01983276 ; faldo:reference ?thisSequence . ?targetMotifSequenceAlignmentOperationMF_01983284 edam:has_input signature:MF_01983 ; rdf:type edam:operation_0300 . BIND(STRLEN(REPLACE(SUBSTR(?templateMotifCigarQ9I6N5MF_01983273, 1, (STRLEN(?templateMotifCigarQ9I6N5MF_01983273) - STRLEN(REPLACE(?templateMotifCigarQ9I6N5MF_01983273, CONCAT('^(?:-*[^-]){', STR(((229 - ?templateMotifSequenceMatchBeginPositionQ9I6N5274) + 1)), '}'), '')))), '[a-z]', '')) AS ?step1285) . BIND((STRLEN(SUBSTR(?targetMotifMatchCigarQ9I6N5MF_01983275, 1, (STRLEN(?targetMotifMatchCigarQ9I6N5MF_01983275) - STRLEN(REPLACE(?targetMotifMatchCigarQ9I6N5MF_01983275, CONCAT('^(?:[a-z]*(?:[A-Z]|-)){', STR(?step1285), '}'), ''))))) - STRLEN(REPLACE(SUBSTR(?targetMotifMatchCigarQ9I6N5MF_01983275, 1, (STRLEN(?targetMotifMatchCigarQ9I6N5MF_01983275) - STRLEN(REPLACE(?targetMotifMatchCigarQ9I6N5MF_01983275, CONCAT('^(?:[a-z]*(?:[A-Z]|-)){', STR(?step1285), '}'), '')))), '[^-]', ''))) AS ?step2286) . BIND(((?step2286 + ?targetMotifMatchRegionMatchBeginPositionMF_01983276) - 1) AS ?thisPositionOn92) . BIND(?thisPositionOn92 AS ?thisPositionOn93) . BIND(?this AS ?pfs1t287) . BIND(URI(CONCAT(STR(?thisSequence), '#position', STR(?thisPositionOn92))) AS ?pfsb89) . BIND(URI(CONCAT(STR(?thisSequence), '#position', STR(?thisPositionOn93))) AS ?pfse90) . FILTER ((SUBSTR(?thisSequenceValue, ?thisPositionOn92, 1) = 'E')) . BIND(URI(CONCAT(STR(?this), '#MF_01983a88')) AS ?annotation88) . BIND(?this AS ?pfs87) . } OPTIONAL { ?this up:sequence ?thisSequence . ?thisSequence rdf:value ?thisSequenceValue . ?templateMotifMatch292 faldo:location ?templateMotifSequenceMatchRegionQ9I6N5293 ; edam:is_output_of ?templateMotifSequenceProfileAlignmentOperationQ9I6N5295 ; rdf:type edam:data_0869 ; rdf:value ?templateMotifCigarQ9I6N5MF_01983288 . ?templateMotifSequenceMatchRegionQ9I6N5293 faldo:begin ?templateMotifSequenceMatchBeginQ9I6N5294 . ?templateMotifSequenceMatchBeginQ9I6N5294 faldo:position ?templateMotifSequenceMatchBeginPositionQ9I6N5289 ; faldo:reference isoform:Q9I6N5-1 . ?templateMotifSequenceProfileAlignmentOperationQ9I6N5295 edam:has_input signature:MF_01983 ; rdf:type edam:operation_0300 . ?targetMotifMatch296 faldo:location ?targetMotifMatchRegionMatch297 ; edam:is_output_of ?targetMotifSequenceAlignmentOperationMF_01983299 ; rdf:type edam:data_0869 ; rdf:value ?targetMotifMatchCigarQ9I6N5MF_01983290 . ?targetMotifMatchRegionMatch297 faldo:begin ?targetMotifMatchRegionMatchBeginMF_01983298 . ?targetMotifMatchRegionMatchBeginMF_01983298 faldo:position ?targetMotifMatchRegionMatchBeginPositionMF_01983291 ; faldo:reference ?thisSequence . ?targetMotifSequenceAlignmentOperationMF_01983299 edam:has_input signature:MF_01983 ; rdf:type edam:operation_0300 . BIND(STRLEN(REPLACE(SUBSTR(?templateMotifCigarQ9I6N5MF_01983288, 1, (STRLEN(?templateMotifCigarQ9I6N5MF_01983288) - STRLEN(REPLACE(?templateMotifCigarQ9I6N5MF_01983288, CONCAT('^(?:-*[^-]){', STR(((229 - ?templateMotifSequenceMatchBeginPositionQ9I6N5289) + 1)), '}'), '')))), '[a-z]', '')) AS ?step1300) . BIND((STRLEN(SUBSTR(?targetMotifMatchCigarQ9I6N5MF_01983290, 1, (STRLEN(?targetMotifMatchCigarQ9I6N5MF_01983290) - STRLEN(REPLACE(?targetMotifMatchCigarQ9I6N5MF_01983290, CONCAT('^(?:[a-z]*(?:[A-Z]|-)){', STR(?step1300), '}'), ''))))) - STRLEN(REPLACE(SUBSTR(?targetMotifMatchCigarQ9I6N5MF_01983290, 1, (STRLEN(?targetMotifMatchCigarQ9I6N5MF_01983290) - STRLEN(REPLACE(?targetMotifMatchCigarQ9I6N5MF_01983290, CONCAT('^(?:[a-z]*(?:[A-Z]|-)){', STR(?step1300), '}'), '')))), '[^-]', ''))) AS ?step2301) . BIND(((?step2301 + ?targetMotifMatchRegionMatchBeginPositionMF_01983291) - 1) AS ?thisPositionOn99) . BIND(?thisPositionOn99 AS ?thisPositionOn100) . BIND(?this AS ?pfs1t302) . BIND(URI(CONCAT(STR(?thisSequence), '#position', STR(?thisPositionOn99))) AS ?pfsb96) . BIND(URI(CONCAT(STR(?thisSequence), '#position', STR(?thisPositionOn100))) AS ?pfse97) . FILTER ((SUBSTR(?thisSequenceValue, ?thisPositionOn99, 1) = 'E')) . BIND(URI(CONCAT(STR(?this), '#MF_01983a95')) AS ?annotation95) . BIND(?this AS ?pfs94) . } OPTIONAL { ?this up:sequence ?thisSequence . ?thisSequence rdf:value ?thisSequenceValue . ?templateMotifMatch307 faldo:location ?templateMotifSequenceMatchRegionQ9I6N5308 ; edam:is_output_of ?templateMotifSequenceProfileAlignmentOperationQ9I6N5310 ; rdf:type edam:data_0869 ; rdf:value ?templateMotifCigarQ9I6N5MF_01983303 . ?templateMotifSequenceMatchRegionQ9I6N5308 faldo:begin ?templateMotifSequenceMatchBeginQ9I6N5309 . ?templateMotifSequenceMatchBeginQ9I6N5309 faldo:position ?templateMotifSequenceMatchBeginPositionQ9I6N5304 ; faldo:reference isoform:Q9I6N5-1 . ?templateMotifSequenceProfileAlignmentOperationQ9I6N5310 edam:has_input signature:MF_01983 ; rdf:type edam:operation_0300 . ?targetMotifMatch311 faldo:location ?targetMotifMatchRegionMatch312 ; edam:is_output_of ?targetMotifSequenceAlignmentOperationMF_01983314 ; rdf:type edam:data_0869 ; rdf:value ?targetMotifMatchCigarQ9I6N5MF_01983305 . ?targetMotifMatchRegionMatch312 faldo:begin ?targetMotifMatchRegionMatchBeginMF_01983313 . ?targetMotifMatchRegionMatchBeginMF_01983313 faldo:position ?targetMotifMatchRegionMatchBeginPositionMF_01983306 ; faldo:reference ?thisSequence . ?targetMotifSequenceAlignmentOperationMF_01983314 edam:has_input signature:MF_01983 ; rdf:type edam:operation_0300 . BIND(STRLEN(REPLACE(SUBSTR(?templateMotifCigarQ9I6N5MF_01983303, 1, (STRLEN(?templateMotifCigarQ9I6N5MF_01983303) - STRLEN(REPLACE(?templateMotifCigarQ9I6N5MF_01983303, CONCAT('^(?:-*[^-]){', STR(((386 - ?templateMotifSequenceMatchBeginPositionQ9I6N5304) + 1)), '}'), '')))), '[a-z]', '')) AS ?step1315) . BIND((STRLEN(SUBSTR(?targetMotifMatchCigarQ9I6N5MF_01983305, 1, (STRLEN(?targetMotifMatchCigarQ9I6N5MF_01983305) - STRLEN(REPLACE(?targetMotifMatchCigarQ9I6N5MF_01983305, CONCAT('^(?:[a-z]*(?:[A-Z]|-)){', STR(?step1315), '}'), ''))))) - STRLEN(REPLACE(SUBSTR(?targetMotifMatchCigarQ9I6N5MF_01983305, 1, (STRLEN(?targetMotifMatchCigarQ9I6N5MF_01983305) - STRLEN(REPLACE(?targetMotifMatchCigarQ9I6N5MF_01983305, CONCAT('^(?:[a-z]*(?:[A-Z]|-)){', STR(?step1315), '}'), '')))), '[^-]', ''))) AS ?step2316) . BIND(((?step2316 + ?targetMotifMatchRegionMatchBeginPositionMF_01983306) - 1) AS ?thisPositionOn106) . BIND(?thisPositionOn106 AS ?thisPositionOn107) . BIND(?this AS ?pfs1t317) . BIND(URI(CONCAT(STR(?thisSequence), '#position', STR(?thisPositionOn106))) AS ?pfsb103) . BIND(URI(CONCAT(STR(?thisSequence), '#position', STR(?thisPositionOn107))) AS ?pfse104) . FILTER ((SUBSTR(?thisSequenceValue, ?thisPositionOn106, 1) = 'H')) . BIND(URI(CONCAT(STR(?this), '#MF_01983a102')) AS ?annotation102) . BIND(?this AS ?pfs101) . } }