CONSTRUCT { _:733973 up:source unirule:MF_02074 . _:733974 up:source unirule:MF_02074 . _:733975 up:source unirule:MF_02074 . _:733976 up:source unirule:MF_02074 . _:733977 up:source unirule:MF_02074 . _:733978 up:source unirule:MF_02074 . _:733979 up:source unirule:MF_02074 . _:733980 up:source unirule:MF_02074 . _:733981 up:source unirule:MF_02074 . _:733982 up:source unirule:MF_02074 . _:733983 up:source unirule:MF_02074 . _:733984 up:source unirule:MF_02074 . _:733985 up:source unirule:MF_02074 . _:733986 up:source unirule:MF_02074 . _:733987 up:source unirule:MF_02074 . _:733988 up:source unirule:MF_02074 . _:733989 up:source unirule:MF_02074 . _:733990 up:source unirule:MF_02074 . _:733991 up:source unirule:MF_02074 . _:733992 up:source unirule:MF_02074 . _:733993 up:source unirule:MF_02074 . _:733994 up:source unirule:MF_02074 . _:733995 up:source unirule:MF_02074 . _:733996 up:source unirule:MF_02074 . _:733997 up:source unirule:MF_02074 . _:733998 up:source unirule:MF_02074 . _:733999 up:source unirule:MF_02074 . _:734000 up:source unirule:MF_02074 . _:734001 up:source unirule:MF_02074 . ?this up:annotation ?annotation1 , ?annotation2 , ?annotation4 , ?annotation6 , ?annotation8 , ?annotation10 , ?annotation11 ; up:classifiedWith GO:0050660 , GO:0050661 , GO:0050664 , GO:0051287 , keyword:274 , keyword:285 , keyword:520 , keyword:521 , keyword:547 , keyword:560 ; up:recommendedName ?name0 . ?name0 up:ecName '1.6.3.5' ; up:fullName 'Renalase' ; rdf:type up:Structured_Name . ?annotation1 a up:Function_Annotation ; rdfs:comment 'Catalyzes the oxidation of the 1,2-dihydro- and 1,6-dihydro- isomeric forms of beta-NAD(P) back to beta-NAD(P)+. May serve to protect primary metabolism dehydrogenases from inhibition by the 1,2-dihydro- and 1,6-dihydro-beta-NAD(P) isomers.' . ?annotation2 up:activity ?activity3 ; rdf:type up:Catalytic_Activity_Annotation . ?activity3 up:catalyticActivity <http://rdf.rhea-db.org/40395>; up:enzymeClass <http://purl.uniprot.org/enzyme/1.6.3.5>. ?annotation4 up:activity ?activity5 ; rdf:type up:Catalytic_Activity_Annotation . ?activity5 up:catalyticActivity <http://rdf.rhea-db.org/40399>; up:enzymeClass <http://purl.uniprot.org/enzyme/1.6.3.5>. ?annotation6 up:activity ?activity7 ; rdf:type up:Catalytic_Activity_Annotation . ?activity7 up:catalyticActivity <http://rdf.rhea-db.org/48000>; up:enzymeClass <http://purl.uniprot.org/enzyme/1.6.3.5>. ?annotation8 up:activity ?activity9 ; rdf:type up:Catalytic_Activity_Annotation . ?activity9 up:catalyticActivity <http://rdf.rhea-db.org/47996>; up:enzymeClass <http://purl.uniprot.org/enzyme/1.6.3.5>. ?annotation10 up:cofactor chebi:57692 ; rdf:type up:Cofactor_Annotation . ?annotation11 a up:Similarity_Annotation ; rdfs:comment 'Belongs to the bacterial renalase family.' . ?pfs12 up:annotation ?annotation13 . ?annotation13 faldo:begin ?pfsb14 ; faldo:end ?pfse15 ; up:ligand ?ligand16 ; rdf:type up:Binding_Site_Annotation . ?pfsb14 faldo:position ?thisPositionOn17 ; rdf:type faldo:ExactPosition . ?pfse15 faldo:position ?thisPositionOn18 ; rdf:type faldo:ExactPosition . ?ligand16 rdfs:subClassOf chebi:57692 . ?pfs19 up:annotation ?annotation20 . ?annotation20 faldo:begin ?pfsb21 ; faldo:end ?pfse22 ; up:ligand ?ligand23 ; rdf:type up:Binding_Site_Annotation . ?pfsb21 faldo:position ?thisPositionOn24 ; rdf:type faldo:ExactPosition . ?pfse22 faldo:position ?thisPositionOn25 ; rdf:type faldo:ExactPosition . ?ligand23 rdfs:subClassOf chebi:57692 . ?pfs26 up:annotation ?annotation27 . ?annotation27 faldo:begin ?pfsb28 ; faldo:end ?pfse29 ; up:ligand ?ligand30 ; rdf:type up:Binding_Site_Annotation . ?pfsb28 faldo:position ?thisPositionOn32 ; rdf:type faldo:ExactPosition . ?pfse29 faldo:position ?thisPositionOn33 ; rdf:type faldo:ExactPosition . ?ligand30 rdfs:subClassOf ?molecule31 . ?molecule31 rdfs:label 'substrate' . ?pfs34 up:annotation ?annotation35 . ?annotation35 faldo:begin ?pfsb36 ; faldo:end ?pfse37 ; up:ligand ?ligand38 ; rdf:type up:Binding_Site_Annotation . ?pfsb36 faldo:position ?thisPositionOn40 ; rdf:type faldo:ExactPosition . ?pfse37 faldo:position ?thisPositionOn41 ; rdf:type faldo:ExactPosition . ?ligand38 rdfs:subClassOf ?molecule39 . ?molecule39 rdfs:label 'substrate' . ?pfs42 up:annotation ?annotation43 . ?annotation43 faldo:begin ?pfsb44 ; faldo:end ?pfse45 ; up:ligand ?ligand46 ; rdf:type up:Binding_Site_Annotation . ?pfsb44 faldo:position ?thisPositionOn47 ; rdf:type faldo:ExactPosition . ?pfse45 faldo:position ?thisPositionOn48 ; rdf:type faldo:ExactPosition . ?ligand46 rdfs:subClassOf chebi:57692 . ?pfs49 up:annotation ?annotation50 . ?annotation50 faldo:begin ?pfsb51 ; faldo:end ?pfse52 ; up:ligand ?ligand53 ; rdf:type up:Binding_Site_Annotation . ?pfsb51 faldo:position ?thisPositionOn54 ; rdf:type faldo:ExactPosition . ?pfse52 faldo:position ?thisPositionOn55 ; rdf:type faldo:ExactPosition . ?ligand53 rdfs:subClassOf chebi:57692 . ?pfs56 up:annotation ?annotation57 . ?annotation57 faldo:begin ?pfsb58 ; faldo:end ?pfse59 ; up:ligand ?ligand60 ; rdf:type up:Binding_Site_Annotation . ?pfsb58 faldo:position ?thisPositionOn61 ; rdf:type faldo:ExactPosition . ?pfse59 faldo:position ?thisPositionOn62 ; rdf:type faldo:ExactPosition . ?ligand60 rdfs:subClassOf chebi:57692 . ?pfs63 up:annotation ?annotation64 . ?annotation64 faldo:begin ?pfsb65 ; faldo:end ?pfse66 ; up:ligand ?ligand67 ; rdf:type up:Binding_Site_Annotation . ?pfsb65 faldo:position ?thisPositionOn69 ; rdf:type faldo:ExactPosition . ?pfse66 faldo:position ?thisPositionOn70 ; rdf:type faldo:ExactPosition . ?ligand67 rdfs:subClassOf ?molecule68 . ?molecule68 rdfs:label 'substrate' . ?pfs71 up:annotation ?annotation72 . ?annotation72 faldo:begin ?pfsb73 ; faldo:end ?pfse74 ; up:ligand ?ligand75 ; rdf:type up:Binding_Site_Annotation . ?pfsb73 faldo:position ?thisPositionOn76 ; rdf:type faldo:ExactPosition . ?pfse74 faldo:position ?thisPositionOn77 ; rdf:type faldo:ExactPosition . ?ligand75 rdfs:subClassOf chebi:57692 . ?pfs78 up:annotation ?annotation79 . ?annotation79 faldo:begin ?pfsb80 ; faldo:end ?pfse81 ; up:ligand ?ligand82 ; rdf:type up:Binding_Site_Annotation . ?pfsb80 faldo:position ?thisPositionOn84 ; rdf:type faldo:ExactPosition . ?pfse81 faldo:position ?thisPositionOn85 ; rdf:type faldo:ExactPosition . ?ligand82 rdfs:subClassOf ?molecule83 . ?molecule83 rdfs:label 'substrate' . ?pfs86 up:annotation ?annotation87 . ?annotation87 faldo:begin ?pfsb88 ; faldo:end ?pfse89 ; up:ligand ?ligand90 ; rdf:type up:Binding_Site_Annotation . ?pfsb88 faldo:position ?thisPositionOn91 ; rdf:type faldo:ExactPosition . ?pfse89 faldo:position ?thisPositionOn92 ; rdf:type faldo:ExactPosition . ?ligand90 rdfs:subClassOf chebi:57692 . _:734002 a rdf:Statement ; up:attribution _:733973 ; rdf:subject ?this ; rdf:predicate up:recommendedName ; rdf:object ?name0 . _:734003 a rdf:Statement ; up:attribution _:733974 ; rdf:subject ?this ; rdf:predicate up:annotation ; rdf:object ?annotation1 . _:734004 a rdf:Statement ; up:attribution _:733975 ; rdf:subject ?this ; rdf:predicate up:annotation ; rdf:object ?annotation2 . _:734005 a rdf:Statement ; up:attribution _:733976 ; rdf:subject ?this ; rdf:predicate up:annotation ; rdf:object ?annotation4 . _:734006 a rdf:Statement ; up:attribution _:733977 ; rdf:subject ?this ; rdf:predicate up:annotation ; rdf:object ?annotation6 . _:734007 a rdf:Statement ; up:attribution _:733978 ; rdf:subject ?this ; rdf:predicate up:annotation ; rdf:object ?annotation8 . _:734008 a rdf:Statement ; up:attribution _:733979 ; rdf:subject ?this ; rdf:predicate up:annotation ; rdf:object ?annotation10 . _:734009 a rdf:Statement ; up:attribution _:733980 ; rdf:subject ?this ; rdf:predicate up:annotation ; rdf:object ?annotation11 . _:734010 a rdf:Statement ; up:attribution _:733981 ; rdf:subject ?this ; rdf:predicate up:classifiedWith ; rdf:object keyword:274 . _:734011 a rdf:Statement ; up:attribution _:733982 ; rdf:subject ?this ; rdf:predicate up:classifiedWith ; rdf:object keyword:285 . _:734012 a rdf:Statement ; up:attribution _:733983 ; rdf:subject ?this ; rdf:predicate up:classifiedWith ; rdf:object keyword:520 . _:734013 a rdf:Statement ; up:attribution _:733984 ; rdf:subject ?this ; rdf:predicate up:classifiedWith ; rdf:object keyword:521 . _:734014 a rdf:Statement ; up:attribution _:733985 ; rdf:subject ?this ; rdf:predicate up:classifiedWith ; rdf:object keyword:547 . _:734015 a rdf:Statement ; up:attribution _:733986 ; rdf:subject ?this ; rdf:predicate up:classifiedWith ; rdf:object keyword:560 . _:734016 a rdf:Statement ; up:attribution _:733987 ; rdf:subject ?this ; rdf:predicate up:classifiedWith ; rdf:object GO:0050660 . _:734017 a rdf:Statement ; up:attribution _:733988 ; rdf:subject ?this ; rdf:predicate up:classifiedWith ; rdf:object GO:0050661 . _:734018 a rdf:Statement ; up:attribution _:733989 ; rdf:subject ?this ; rdf:predicate up:classifiedWith ; rdf:object GO:0051287 . _:734019 a rdf:Statement ; up:attribution _:733990 ; rdf:subject ?this ; rdf:predicate up:classifiedWith ; rdf:object GO:0050664 . _:734020 a rdf:Statement ; up:source unirule:MF_02074 ; rdf:subject ?pfs12 ; rdf:predicate up:annotation ; rdf:object ?annotation13 . _:734021 a rdf:Statement ; up:attribution _:733991 ; rdf:subject ?pfs12 ; rdf:predicate up:annotation ; rdf:object ?annotation13 . _:734022 a rdf:Statement ; up:source unirule:MF_02074 ; rdf:subject ?pfs19 ; rdf:predicate up:annotation ; rdf:object ?annotation20 . _:734023 a rdf:Statement ; up:attribution _:733992 ; rdf:subject ?pfs19 ; rdf:predicate up:annotation ; rdf:object ?annotation20 . _:734024 a rdf:Statement ; up:source unirule:MF_02074 ; rdf:subject ?pfs26 ; rdf:predicate up:annotation ; rdf:object ?annotation27 . _:734025 a rdf:Statement ; up:attribution _:733993 ; rdf:subject ?pfs26 ; rdf:predicate up:annotation ; rdf:object ?annotation27 . _:734026 a rdf:Statement ; up:source unirule:MF_02074 ; rdf:subject ?pfs34 ; rdf:predicate up:annotation ; rdf:object ?annotation35 . _:734027 a rdf:Statement ; up:attribution _:733994 ; rdf:subject ?pfs34 ; rdf:predicate up:annotation ; rdf:object ?annotation35 . _:734028 a rdf:Statement ; up:source unirule:MF_02074 ; rdf:subject ?pfs42 ; rdf:predicate up:annotation ; rdf:object ?annotation43 . _:734029 a rdf:Statement ; up:attribution _:733995 ; rdf:subject ?pfs42 ; rdf:predicate up:annotation ; rdf:object ?annotation43 . _:734030 a rdf:Statement ; up:source unirule:MF_02074 ; rdf:subject ?pfs49 ; rdf:predicate up:annotation ; rdf:object ?annotation50 . _:734031 a rdf:Statement ; up:attribution _:733996 ; rdf:subject ?pfs49 ; rdf:predicate up:annotation ; rdf:object ?annotation50 . _:734032 a rdf:Statement ; up:source unirule:MF_02074 ; rdf:subject ?pfs56 ; rdf:predicate up:annotation ; rdf:object ?annotation57 . _:734033 a rdf:Statement ; up:attribution _:733997 ; rdf:subject ?pfs56 ; rdf:predicate up:annotation ; rdf:object ?annotation57 . _:734034 a rdf:Statement ; up:source unirule:MF_02074 ; rdf:subject ?pfs63 ; rdf:predicate up:annotation ; rdf:object ?annotation64 . _:734035 a rdf:Statement ; up:attribution _:733998 ; rdf:subject ?pfs63 ; rdf:predicate up:annotation ; rdf:object ?annotation64 . _:734036 a rdf:Statement ; up:source unirule:MF_02074 ; rdf:subject ?pfs71 ; rdf:predicate up:annotation ; rdf:object ?annotation72 . _:734037 a rdf:Statement ; up:attribution _:733999 ; rdf:subject ?pfs71 ; rdf:predicate up:annotation ; rdf:object ?annotation72 . _:734038 a rdf:Statement ; up:source unirule:MF_02074 ; rdf:subject ?pfs78 ; rdf:predicate up:annotation ; rdf:object ?annotation79 . _:734039 a rdf:Statement ; up:attribution _:734000 ; rdf:subject ?pfs78 ; rdf:predicate up:annotation ; rdf:object ?annotation79 . _:734040 a rdf:Statement ; up:source unirule:MF_02074 ; rdf:subject ?pfs86 ; rdf:predicate up:annotation ; rdf:object ?annotation87 . _:734041 a rdf:Statement ; up:attribution _:734001 ; rdf:subject ?pfs86 ; rdf:predicate up:annotation ; rdf:object ?annotation87 . } WHERE { #baseURI: http://purl.uniprot.org/unirule/MF_02074 #Rule MF_02074 Created by:? on:2016-08-30 Modified by:Edouard de Castro on:2024-09-03 ?this up:organism ?thisOrganism ; rdfs:seeAlso signature:MF_02074 . ?thisOrganism rdfs:subClassOf+ taxon:72274 . BIND(URI(CONCAT(STR(?this), '#MF_02074a0')) AS ?name0) . BIND(URI(CONCAT(STR(?this), '#MF_02074a1')) AS ?annotation1) . BIND(URI(CONCAT(STR(?this), '#MF_02074a2')) AS ?annotation2) . BIND(URI(CONCAT(STR(?this), '#MF_02074a4')) AS ?annotation4) . BIND(URI(CONCAT(STR(?this), '#MF_02074a6')) AS ?annotation6) . BIND(URI(CONCAT(STR(?this), '#MF_02074a8')) AS ?annotation8) . BIND(URI(CONCAT(STR(?this), '#MF_02074a10')) AS ?annotation10) . BIND(URI(CONCAT(STR(?this), '#MF_02074a11')) AS ?annotation11) . OPTIONAL { ?this up:sequence ?thisSequence . ?thisSequence rdf:value ?thisSequenceValue . ?templateMotifMatch97 faldo:location ?templateMotifSequenceMatchRegionQ48MT798 ; edam:is_output_of ?templateMotifSequenceProfileAlignmentOperationQ48MT7100 ; rdf:type edam:data_0869 ; rdf:value ?templateMotifCigarQ48MT7MF_0207493 . ?templateMotifSequenceMatchRegionQ48MT798 faldo:begin ?templateMotifSequenceMatchBeginQ48MT799 . ?templateMotifSequenceMatchBeginQ48MT799 faldo:position ?templateMotifSequenceMatchBeginPositionQ48MT794 ; faldo:reference isoform:Q48MT7-1 . ?templateMotifSequenceProfileAlignmentOperationQ48MT7100 edam:has_input signature:MF_02074 ; rdf:type edam:operation_0300 . ?targetMotifMatch101 faldo:location ?targetMotifMatchRegionMatch102 ; edam:is_output_of ?targetMotifSequenceAlignmentOperationMF_02074104 ; rdf:type edam:data_0869 ; rdf:value ?targetMotifMatchCigarQ48MT7MF_0207495 . ?targetMotifMatchRegionMatch102 faldo:begin ?targetMotifMatchRegionMatchBeginMF_02074103 . ?targetMotifMatchRegionMatchBeginMF_02074103 faldo:position ?targetMotifMatchRegionMatchBeginPositionMF_0207496 ; faldo:reference ?thisSequence . ?targetMotifSequenceAlignmentOperationMF_02074104 edam:has_input signature:MF_02074 ; rdf:type edam:operation_0300 . BIND(STRLEN(REPLACE(SUBSTR(?templateMotifCigarQ48MT7MF_0207493, 1, (STRLEN(?templateMotifCigarQ48MT7MF_0207493) - STRLEN(REPLACE(?templateMotifCigarQ48MT7MF_0207493, CONCAT('^(?:-*[^-]){', STR(((32 - ?templateMotifSequenceMatchBeginPositionQ48MT794) + 1)), '}'), '')))), '[a-z]', '')) AS ?step1105) . BIND((STRLEN(SUBSTR(?targetMotifMatchCigarQ48MT7MF_0207495, 1, (STRLEN(?targetMotifMatchCigarQ48MT7MF_0207495) - STRLEN(REPLACE(?targetMotifMatchCigarQ48MT7MF_0207495, CONCAT('^(?:[a-z]*(?:[A-Z]|-)){', STR(?step1105), '}'), ''))))) - STRLEN(REPLACE(SUBSTR(?targetMotifMatchCigarQ48MT7MF_0207495, 1, (STRLEN(?targetMotifMatchCigarQ48MT7MF_0207495) - STRLEN(REPLACE(?targetMotifMatchCigarQ48MT7MF_0207495, CONCAT('^(?:[a-z]*(?:[A-Z]|-)){', STR(?step1105), '}'), '')))), '[^-]', ''))) AS ?step2106) . BIND(((?step2106 + ?targetMotifMatchRegionMatchBeginPositionMF_0207496) - 1) AS ?thisPositionOn17) . BIND(STRLEN(REPLACE(SUBSTR(?templateMotifCigarQ48MT7MF_0207493, 1, (STRLEN(?templateMotifCigarQ48MT7MF_0207493) - STRLEN(REPLACE(?templateMotifCigarQ48MT7MF_0207493, CONCAT('^(?:-*[^-]){', STR(((33 - ?templateMotifSequenceMatchBeginPositionQ48MT794) + 1)), '}'), '')))), '[a-z]', '')) AS ?step1107) . BIND((STRLEN(SUBSTR(?targetMotifMatchCigarQ48MT7MF_0207495, 1, (STRLEN(?targetMotifMatchCigarQ48MT7MF_0207495) - STRLEN(REPLACE(?targetMotifMatchCigarQ48MT7MF_0207495, CONCAT('^(?:[a-z]*(?:[A-Z]|-)){', STR(?step1107), '}'), ''))))) - STRLEN(REPLACE(SUBSTR(?targetMotifMatchCigarQ48MT7MF_0207495, 1, (STRLEN(?targetMotifMatchCigarQ48MT7MF_0207495) - STRLEN(REPLACE(?targetMotifMatchCigarQ48MT7MF_0207495, CONCAT('^(?:[a-z]*(?:[A-Z]|-)){', STR(?step1107), '}'), '')))), '[^-]', ''))) AS ?step2108) . BIND(((?step2108 + ?targetMotifMatchRegionMatchBeginPositionMF_0207496) - 1) AS ?thisPositionOn18) . BIND(?this AS ?pfs1t109) . BIND(URI(CONCAT(STR(?thisSequence), '#position', STR(?thisPositionOn17))) AS ?pfsb14) . BIND(URI(CONCAT(STR(?thisSequence), '#position', STR(?thisPositionOn18))) AS ?pfse15) . FILTER (REGEX('[DE]K', SUBSTR(?thisSequenceValue, ?thisPositionOn17, (?thisPositionOn18 - ?thisPositionOn17)))) . BIND(URI(CONCAT(STR(?this), '#MF_02074a13')) AS ?annotation13) . BIND(?this AS ?pfs12) . } OPTIONAL { ?this up:sequence ?thisSequence . ?thisSequence rdf:value ?thisSequenceValue . ?templateMotifMatch114 faldo:location ?templateMotifSequenceMatchRegionQ48MT7115 ; edam:is_output_of ?templateMotifSequenceProfileAlignmentOperationQ48MT7117 ; rdf:type edam:data_0869 ; rdf:value ?templateMotifCigarQ48MT7MF_02074110 . ?templateMotifSequenceMatchRegionQ48MT7115 faldo:begin ?templateMotifSequenceMatchBeginQ48MT7116 . ?templateMotifSequenceMatchBeginQ48MT7116 faldo:position ?templateMotifSequenceMatchBeginPositionQ48MT7111 ; faldo:reference isoform:Q48MT7-1 . ?templateMotifSequenceProfileAlignmentOperationQ48MT7117 edam:has_input signature:MF_02074 ; rdf:type edam:operation_0300 . ?targetMotifMatch118 faldo:location ?targetMotifMatchRegionMatch119 ; edam:is_output_of ?targetMotifSequenceAlignmentOperationMF_02074121 ; rdf:type edam:data_0869 ; rdf:value ?targetMotifMatchCigarQ48MT7MF_02074112 . ?targetMotifMatchRegionMatch119 faldo:begin ?targetMotifMatchRegionMatchBeginMF_02074120 . ?targetMotifMatchRegionMatchBeginMF_02074120 faldo:position ?targetMotifMatchRegionMatchBeginPositionMF_02074113 ; faldo:reference ?thisSequence . ?targetMotifSequenceAlignmentOperationMF_02074121 edam:has_input signature:MF_02074 ; rdf:type edam:operation_0300 . BIND(STRLEN(REPLACE(SUBSTR(?templateMotifCigarQ48MT7MF_02074110, 1, (STRLEN(?templateMotifCigarQ48MT7MF_02074110) - STRLEN(REPLACE(?templateMotifCigarQ48MT7MF_02074110, CONCAT('^(?:-*[^-]){', STR(((56 - ?templateMotifSequenceMatchBeginPositionQ48MT7111) + 1)), '}'), '')))), '[a-z]', '')) AS ?step1122) . BIND((STRLEN(SUBSTR(?targetMotifMatchCigarQ48MT7MF_02074112, 1, (STRLEN(?targetMotifMatchCigarQ48MT7MF_02074112) - STRLEN(REPLACE(?targetMotifMatchCigarQ48MT7MF_02074112, CONCAT('^(?:[a-z]*(?:[A-Z]|-)){', STR(?step1122), '}'), ''))))) - STRLEN(REPLACE(SUBSTR(?targetMotifMatchCigarQ48MT7MF_02074112, 1, (STRLEN(?targetMotifMatchCigarQ48MT7MF_02074112) - STRLEN(REPLACE(?targetMotifMatchCigarQ48MT7MF_02074112, CONCAT('^(?:[a-z]*(?:[A-Z]|-)){', STR(?step1122), '}'), '')))), '[^-]', ''))) AS ?step2123) . BIND(((?step2123 + ?targetMotifMatchRegionMatchBeginPositionMF_02074113) - 1) AS ?thisPositionOn24) . BIND(STRLEN(REPLACE(SUBSTR(?templateMotifCigarQ48MT7MF_02074110, 1, (STRLEN(?templateMotifCigarQ48MT7MF_02074110) - STRLEN(REPLACE(?templateMotifCigarQ48MT7MF_02074110, CONCAT('^(?:-*[^-]){', STR(((57 - ?templateMotifSequenceMatchBeginPositionQ48MT7111) + 1)), '}'), '')))), '[a-z]', '')) AS ?step1124) . BIND((STRLEN(SUBSTR(?targetMotifMatchCigarQ48MT7MF_02074112, 1, (STRLEN(?targetMotifMatchCigarQ48MT7MF_02074112) - STRLEN(REPLACE(?targetMotifMatchCigarQ48MT7MF_02074112, CONCAT('^(?:[a-z]*(?:[A-Z]|-)){', STR(?step1124), '}'), ''))))) - STRLEN(REPLACE(SUBSTR(?targetMotifMatchCigarQ48MT7MF_02074112, 1, (STRLEN(?targetMotifMatchCigarQ48MT7MF_02074112) - STRLEN(REPLACE(?targetMotifMatchCigarQ48MT7MF_02074112, CONCAT('^(?:[a-z]*(?:[A-Z]|-)){', STR(?step1124), '}'), '')))), '[^-]', ''))) AS ?step2125) . BIND(((?step2125 + ?targetMotifMatchRegionMatchBeginPositionMF_02074113) - 1) AS ?thisPositionOn25) . BIND(?this AS ?pfs1t126) . BIND(URI(CONCAT(STR(?thisSequence), '#position', STR(?thisPositionOn24))) AS ?pfsb21) . BIND(URI(CONCAT(STR(?thisSequence), '#position', STR(?thisPositionOn25))) AS ?pfse22) . FILTER ((SUBSTR(?thisSequenceValue, ?thisPositionOn24, (?thisPositionOn25 - ?thisPositionOn24)) = 'QY')) . BIND(URI(CONCAT(STR(?this), '#MF_02074a20')) AS ?annotation20) . BIND(?this AS ?pfs19) . } OPTIONAL { ?this up:sequence ?thisSequence . ?thisSequence rdf:value ?thisSequenceValue . ?templateMotifMatch131 faldo:location ?templateMotifSequenceMatchRegionQ48MT7132 ; edam:is_output_of ?templateMotifSequenceProfileAlignmentOperationQ48MT7134 ; rdf:type edam:data_0869 ; rdf:value ?templateMotifCigarQ48MT7MF_02074127 . ?templateMotifSequenceMatchRegionQ48MT7132 faldo:begin ?templateMotifSequenceMatchBeginQ48MT7133 . ?templateMotifSequenceMatchBeginQ48MT7133 faldo:position ?templateMotifSequenceMatchBeginPositionQ48MT7128 ; faldo:reference isoform:Q48MT7-1 . ?templateMotifSequenceProfileAlignmentOperationQ48MT7134 edam:has_input signature:MF_02074 ; rdf:type edam:operation_0300 . ?targetMotifMatch135 faldo:location ?targetMotifMatchRegionMatch136 ; edam:is_output_of ?targetMotifSequenceAlignmentOperationMF_02074138 ; rdf:type edam:data_0869 ; rdf:value ?targetMotifMatchCigarQ48MT7MF_02074129 . ?targetMotifMatchRegionMatch136 faldo:begin ?targetMotifMatchRegionMatchBeginMF_02074137 . ?targetMotifMatchRegionMatchBeginMF_02074137 faldo:position ?targetMotifMatchRegionMatchBeginPositionMF_02074130 ; faldo:reference ?thisSequence . ?targetMotifSequenceAlignmentOperationMF_02074138 edam:has_input signature:MF_02074 ; rdf:type edam:operation_0300 . BIND(STRLEN(REPLACE(SUBSTR(?templateMotifCigarQ48MT7MF_02074127, 1, (STRLEN(?templateMotifCigarQ48MT7MF_02074127) - STRLEN(REPLACE(?templateMotifCigarQ48MT7MF_02074127, CONCAT('^(?:-*[^-]){', STR(((57 - ?templateMotifSequenceMatchBeginPositionQ48MT7128) + 1)), '}'), '')))), '[a-z]', '')) AS ?step1139) . BIND((STRLEN(SUBSTR(?targetMotifMatchCigarQ48MT7MF_02074129, 1, (STRLEN(?targetMotifMatchCigarQ48MT7MF_02074129) - STRLEN(REPLACE(?targetMotifMatchCigarQ48MT7MF_02074129, CONCAT('^(?:[a-z]*(?:[A-Z]|-)){', STR(?step1139), '}'), ''))))) - STRLEN(REPLACE(SUBSTR(?targetMotifMatchCigarQ48MT7MF_02074129, 1, (STRLEN(?targetMotifMatchCigarQ48MT7MF_02074129) - STRLEN(REPLACE(?targetMotifMatchCigarQ48MT7MF_02074129, CONCAT('^(?:[a-z]*(?:[A-Z]|-)){', STR(?step1139), '}'), '')))), '[^-]', ''))) AS ?step2140) . BIND(((?step2140 + ?targetMotifMatchRegionMatchBeginPositionMF_02074130) - 1) AS ?thisPositionOn32) . BIND(STRLEN(REPLACE(SUBSTR(?templateMotifCigarQ48MT7MF_02074127, 1, (STRLEN(?templateMotifCigarQ48MT7MF_02074127) - STRLEN(REPLACE(?templateMotifCigarQ48MT7MF_02074127, CONCAT('^(?:-*[^-]){', STR(((61 - ?templateMotifSequenceMatchBeginPositionQ48MT7128) + 1)), '}'), '')))), '[a-z]', '')) AS ?step1141) . BIND((STRLEN(SUBSTR(?targetMotifMatchCigarQ48MT7MF_02074129, 1, (STRLEN(?targetMotifMatchCigarQ48MT7MF_02074129) - STRLEN(REPLACE(?targetMotifMatchCigarQ48MT7MF_02074129, CONCAT('^(?:[a-z]*(?:[A-Z]|-)){', STR(?step1141), '}'), ''))))) - STRLEN(REPLACE(SUBSTR(?targetMotifMatchCigarQ48MT7MF_02074129, 1, (STRLEN(?targetMotifMatchCigarQ48MT7MF_02074129) - STRLEN(REPLACE(?targetMotifMatchCigarQ48MT7MF_02074129, CONCAT('^(?:[a-z]*(?:[A-Z]|-)){', STR(?step1141), '}'), '')))), '[^-]', ''))) AS ?step2142) . BIND(((?step2142 + ?targetMotifMatchRegionMatchBeginPositionMF_02074130) - 1) AS ?thisPositionOn33) . BIND(?this AS ?pfs1t143) . BIND(URI(CONCAT(STR(?thisSequence), '#position', STR(?thisPositionOn32))) AS ?pfsb28) . BIND(URI(CONCAT(STR(?thisSequence), '#position', STR(?thisPositionOn33))) AS ?pfse29) . FILTER (REGEX('YFT[ARNDCQEGHILKMFPSTWYVBZJUOX]R', SUBSTR(?thisSequenceValue, ?thisPositionOn32, (?thisPositionOn33 - ?thisPositionOn32)))) . BIND(URI(CONCAT(STR(?this), '#MF_02074a27')) AS ?annotation27) . BIND(?this AS ?pfs26) . } OPTIONAL { ?this up:sequence ?thisSequence . ?thisSequence rdf:value ?thisSequenceValue . ?templateMotifMatch148 faldo:location ?templateMotifSequenceMatchRegionQ48MT7149 ; edam:is_output_of ?templateMotifSequenceProfileAlignmentOperationQ48MT7151 ; rdf:type edam:data_0869 ; rdf:value ?templateMotifCigarQ48MT7MF_02074144 . ?templateMotifSequenceMatchRegionQ48MT7149 faldo:begin ?templateMotifSequenceMatchBeginQ48MT7150 . ?templateMotifSequenceMatchBeginQ48MT7150 faldo:position ?templateMotifSequenceMatchBeginPositionQ48MT7145 ; faldo:reference isoform:Q48MT7-1 . ?templateMotifSequenceProfileAlignmentOperationQ48MT7151 edam:has_input signature:MF_02074 ; rdf:type edam:operation_0300 . ?targetMotifMatch152 faldo:location ?targetMotifMatchRegionMatch153 ; edam:is_output_of ?targetMotifSequenceAlignmentOperationMF_02074155 ; rdf:type edam:data_0869 ; rdf:value ?targetMotifMatchCigarQ48MT7MF_02074146 . ?targetMotifMatchRegionMatch153 faldo:begin ?targetMotifMatchRegionMatchBeginMF_02074154 . ?targetMotifMatchRegionMatchBeginMF_02074154 faldo:position ?targetMotifMatchRegionMatchBeginPositionMF_02074147 ; faldo:reference ?thisSequence . ?targetMotifSequenceAlignmentOperationMF_02074155 edam:has_input signature:MF_02074 ; rdf:type edam:operation_0300 . BIND(STRLEN(REPLACE(SUBSTR(?templateMotifCigarQ48MT7MF_02074144, 1, (STRLEN(?templateMotifCigarQ48MT7MF_02074144) - STRLEN(REPLACE(?templateMotifCigarQ48MT7MF_02074144, CONCAT('^(?:-*[^-]){', STR(((96 - ?templateMotifSequenceMatchBeginPositionQ48MT7145) + 1)), '}'), '')))), '[a-z]', '')) AS ?step1156) . BIND((STRLEN(SUBSTR(?targetMotifMatchCigarQ48MT7MF_02074146, 1, (STRLEN(?targetMotifMatchCigarQ48MT7MF_02074146) - STRLEN(REPLACE(?targetMotifMatchCigarQ48MT7MF_02074146, CONCAT('^(?:[a-z]*(?:[A-Z]|-)){', STR(?step1156), '}'), ''))))) - STRLEN(REPLACE(SUBSTR(?targetMotifMatchCigarQ48MT7MF_02074146, 1, (STRLEN(?targetMotifMatchCigarQ48MT7MF_02074146) - STRLEN(REPLACE(?targetMotifMatchCigarQ48MT7MF_02074146, CONCAT('^(?:[a-z]*(?:[A-Z]|-)){', STR(?step1156), '}'), '')))), '[^-]', ''))) AS ?step2157) . BIND(((?step2157 + ?targetMotifMatchRegionMatchBeginPositionMF_02074147) - 1) AS ?thisPositionOn40) . BIND(STRLEN(REPLACE(SUBSTR(?templateMotifCigarQ48MT7MF_02074144, 1, (STRLEN(?templateMotifCigarQ48MT7MF_02074144) - STRLEN(REPLACE(?templateMotifCigarQ48MT7MF_02074144, CONCAT('^(?:-*[^-]){', STR(((98 - ?templateMotifSequenceMatchBeginPositionQ48MT7145) + 1)), '}'), '')))), '[a-z]', '')) AS ?step1158) . BIND((STRLEN(SUBSTR(?targetMotifMatchCigarQ48MT7MF_02074146, 1, (STRLEN(?targetMotifMatchCigarQ48MT7MF_02074146) - STRLEN(REPLACE(?targetMotifMatchCigarQ48MT7MF_02074146, CONCAT('^(?:[a-z]*(?:[A-Z]|-)){', STR(?step1158), '}'), ''))))) - STRLEN(REPLACE(SUBSTR(?targetMotifMatchCigarQ48MT7MF_02074146, 1, (STRLEN(?targetMotifMatchCigarQ48MT7MF_02074146) - STRLEN(REPLACE(?targetMotifMatchCigarQ48MT7MF_02074146, CONCAT('^(?:[a-z]*(?:[A-Z]|-)){', STR(?step1158), '}'), '')))), '[^-]', ''))) AS ?step2159) . BIND(((?step2159 + ?targetMotifMatchRegionMatchBeginPositionMF_02074147) - 1) AS ?thisPositionOn41) . BIND(?this AS ?pfs1t160) . BIND(URI(CONCAT(STR(?thisSequence), '#position', STR(?thisPositionOn40))) AS ?pfsb36) . BIND(URI(CONCAT(STR(?thisSequence), '#position', STR(?thisPositionOn41))) AS ?pfse37) . FILTER ((SUBSTR(?thisSequenceValue, ?thisPositionOn40, (?thisPositionOn41 - ?thisPositionOn40)) = 'SPD')) . BIND(URI(CONCAT(STR(?this), '#MF_02074a35')) AS ?annotation35) . BIND(?this AS ?pfs34) . } OPTIONAL { ?this up:sequence ?thisSequence . ?thisSequence rdf:value ?thisSequenceValue . ?templateMotifMatch165 faldo:location ?templateMotifSequenceMatchRegionQ48MT7166 ; edam:is_output_of ?templateMotifSequenceProfileAlignmentOperationQ48MT7168 ; rdf:type edam:data_0869 ; rdf:value ?templateMotifCigarQ48MT7MF_02074161 . ?templateMotifSequenceMatchRegionQ48MT7166 faldo:begin ?templateMotifSequenceMatchBeginQ48MT7167 . ?templateMotifSequenceMatchBeginQ48MT7167 faldo:position ?templateMotifSequenceMatchBeginPositionQ48MT7162 ; faldo:reference isoform:Q48MT7-1 . ?templateMotifSequenceProfileAlignmentOperationQ48MT7168 edam:has_input signature:MF_02074 ; rdf:type edam:operation_0300 . ?targetMotifMatch169 faldo:location ?targetMotifMatchRegionMatch170 ; edam:is_output_of ?targetMotifSequenceAlignmentOperationMF_02074172 ; rdf:type edam:data_0869 ; rdf:value ?targetMotifMatchCigarQ48MT7MF_02074163 . ?targetMotifMatchRegionMatch170 faldo:begin ?targetMotifMatchRegionMatchBeginMF_02074171 . ?targetMotifMatchRegionMatchBeginMF_02074171 faldo:position ?targetMotifMatchRegionMatchBeginPositionMF_02074164 ; faldo:reference ?thisSequence . ?targetMotifSequenceAlignmentOperationMF_02074172 edam:has_input signature:MF_02074 ; rdf:type edam:operation_0300 . BIND(STRLEN(REPLACE(SUBSTR(?templateMotifCigarQ48MT7MF_02074161, 1, (STRLEN(?templateMotifCigarQ48MT7MF_02074161) - STRLEN(REPLACE(?templateMotifCigarQ48MT7MF_02074161, CONCAT('^(?:-*[^-]){', STR(((13 - ?templateMotifSequenceMatchBeginPositionQ48MT7162) + 1)), '}'), '')))), '[a-z]', '')) AS ?step1173) . BIND((STRLEN(SUBSTR(?targetMotifMatchCigarQ48MT7MF_02074163, 1, (STRLEN(?targetMotifMatchCigarQ48MT7MF_02074163) - STRLEN(REPLACE(?targetMotifMatchCigarQ48MT7MF_02074163, CONCAT('^(?:[a-z]*(?:[A-Z]|-)){', STR(?step1173), '}'), ''))))) - STRLEN(REPLACE(SUBSTR(?targetMotifMatchCigarQ48MT7MF_02074163, 1, (STRLEN(?targetMotifMatchCigarQ48MT7MF_02074163) - STRLEN(REPLACE(?targetMotifMatchCigarQ48MT7MF_02074163, CONCAT('^(?:[a-z]*(?:[A-Z]|-)){', STR(?step1173), '}'), '')))), '[^-]', ''))) AS ?step2174) . BIND(((?step2174 + ?targetMotifMatchRegionMatchBeginPositionMF_02074164) - 1) AS ?thisPositionOn47) . BIND(?thisPositionOn47 AS ?thisPositionOn48) . BIND(?this AS ?pfs1t175) . BIND(URI(CONCAT(STR(?thisSequence), '#position', STR(?thisPositionOn47))) AS ?pfsb44) . BIND(URI(CONCAT(STR(?thisSequence), '#position', STR(?thisPositionOn48))) AS ?pfse45) . FILTER (REGEX('[AS]', SUBSTR(?thisSequenceValue, ?thisPositionOn47, 1))) . BIND(URI(CONCAT(STR(?this), '#MF_02074a43')) AS ?annotation43) . BIND(?this AS ?pfs42) . } OPTIONAL { ?this up:sequence ?thisSequence . ?thisSequence rdf:value ?thisSequenceValue . ?templateMotifMatch180 faldo:location ?templateMotifSequenceMatchRegionQ48MT7181 ; edam:is_output_of ?templateMotifSequenceProfileAlignmentOperationQ48MT7183 ; rdf:type edam:data_0869 ; rdf:value ?templateMotifCigarQ48MT7MF_02074176 . ?templateMotifSequenceMatchRegionQ48MT7181 faldo:begin ?templateMotifSequenceMatchBeginQ48MT7182 . ?templateMotifSequenceMatchBeginQ48MT7182 faldo:position ?templateMotifSequenceMatchBeginPositionQ48MT7177 ; faldo:reference isoform:Q48MT7-1 . ?templateMotifSequenceProfileAlignmentOperationQ48MT7183 edam:has_input signature:MF_02074 ; rdf:type edam:operation_0300 . ?targetMotifMatch184 faldo:location ?targetMotifMatchRegionMatch185 ; edam:is_output_of ?targetMotifSequenceAlignmentOperationMF_02074187 ; rdf:type edam:data_0869 ; rdf:value ?targetMotifMatchCigarQ48MT7MF_02074178 . ?targetMotifMatchRegionMatch185 faldo:begin ?targetMotifMatchRegionMatchBeginMF_02074186 . ?targetMotifMatchRegionMatchBeginMF_02074186 faldo:position ?targetMotifMatchRegionMatchBeginPositionMF_02074179 ; faldo:reference ?thisSequence . ?targetMotifSequenceAlignmentOperationMF_02074187 edam:has_input signature:MF_02074 ; rdf:type edam:operation_0300 . BIND(STRLEN(REPLACE(SUBSTR(?templateMotifCigarQ48MT7MF_02074176, 1, (STRLEN(?templateMotifCigarQ48MT7MF_02074176) - STRLEN(REPLACE(?templateMotifCigarQ48MT7MF_02074176, CONCAT('^(?:-*[^-]){', STR(((40 - ?templateMotifSequenceMatchBeginPositionQ48MT7177) + 1)), '}'), '')))), '[a-z]', '')) AS ?step1188) . BIND((STRLEN(SUBSTR(?targetMotifMatchCigarQ48MT7MF_02074178, 1, (STRLEN(?targetMotifMatchCigarQ48MT7MF_02074178) - STRLEN(REPLACE(?targetMotifMatchCigarQ48MT7MF_02074178, CONCAT('^(?:[a-z]*(?:[A-Z]|-)){', STR(?step1188), '}'), ''))))) - STRLEN(REPLACE(SUBSTR(?targetMotifMatchCigarQ48MT7MF_02074178, 1, (STRLEN(?targetMotifMatchCigarQ48MT7MF_02074178) - STRLEN(REPLACE(?targetMotifMatchCigarQ48MT7MF_02074178, CONCAT('^(?:[a-z]*(?:[A-Z]|-)){', STR(?step1188), '}'), '')))), '[^-]', ''))) AS ?step2189) . BIND(((?step2189 + ?targetMotifMatchRegionMatchBeginPositionMF_02074179) - 1) AS ?thisPositionOn54) . BIND(?thisPositionOn54 AS ?thisPositionOn55) . BIND(?this AS ?pfs1t190) . BIND(URI(CONCAT(STR(?thisSequence), '#position', STR(?thisPositionOn54))) AS ?pfsb51) . BIND(URI(CONCAT(STR(?thisSequence), '#position', STR(?thisPositionOn55))) AS ?pfse52) . FILTER ((SUBSTR(?thisSequenceValue, ?thisPositionOn54, 1) = 'R')) . BIND(URI(CONCAT(STR(?this), '#MF_02074a50')) AS ?annotation50) . BIND(?this AS ?pfs49) . } OPTIONAL { ?this up:sequence ?thisSequence . ?thisSequence rdf:value ?thisSequenceValue . ?templateMotifMatch195 faldo:location ?templateMotifSequenceMatchRegionQ48MT7196 ; edam:is_output_of ?templateMotifSequenceProfileAlignmentOperationQ48MT7198 ; rdf:type edam:data_0869 ; rdf:value ?templateMotifCigarQ48MT7MF_02074191 . ?templateMotifSequenceMatchRegionQ48MT7196 faldo:begin ?templateMotifSequenceMatchBeginQ48MT7197 . ?templateMotifSequenceMatchBeginQ48MT7197 faldo:position ?templateMotifSequenceMatchBeginPositionQ48MT7192 ; faldo:reference isoform:Q48MT7-1 . ?templateMotifSequenceProfileAlignmentOperationQ48MT7198 edam:has_input signature:MF_02074 ; rdf:type edam:operation_0300 . ?targetMotifMatch199 faldo:location ?targetMotifMatchRegionMatch200 ; edam:is_output_of ?targetMotifSequenceAlignmentOperationMF_02074202 ; rdf:type edam:data_0869 ; rdf:value ?targetMotifMatchCigarQ48MT7MF_02074193 . ?targetMotifMatchRegionMatch200 faldo:begin ?targetMotifMatchRegionMatchBeginMF_02074201 . ?targetMotifMatchRegionMatchBeginMF_02074201 faldo:position ?targetMotifMatchRegionMatchBeginPositionMF_02074194 ; faldo:reference ?thisSequence . ?targetMotifSequenceAlignmentOperationMF_02074202 edam:has_input signature:MF_02074 ; rdf:type edam:operation_0300 . BIND(STRLEN(REPLACE(SUBSTR(?templateMotifCigarQ48MT7MF_02074191, 1, (STRLEN(?templateMotifCigarQ48MT7MF_02074191) - STRLEN(REPLACE(?templateMotifCigarQ48MT7MF_02074191, CONCAT('^(?:-*[^-]){', STR(((128 - ?templateMotifSequenceMatchBeginPositionQ48MT7192) + 1)), '}'), '')))), '[a-z]', '')) AS ?step1203) . BIND((STRLEN(SUBSTR(?targetMotifMatchCigarQ48MT7MF_02074193, 1, (STRLEN(?targetMotifMatchCigarQ48MT7MF_02074193) - STRLEN(REPLACE(?targetMotifMatchCigarQ48MT7MF_02074193, CONCAT('^(?:[a-z]*(?:[A-Z]|-)){', STR(?step1203), '}'), ''))))) - STRLEN(REPLACE(SUBSTR(?targetMotifMatchCigarQ48MT7MF_02074193, 1, (STRLEN(?targetMotifMatchCigarQ48MT7MF_02074193) - STRLEN(REPLACE(?targetMotifMatchCigarQ48MT7MF_02074193, CONCAT('^(?:[a-z]*(?:[A-Z]|-)){', STR(?step1203), '}'), '')))), '[^-]', ''))) AS ?step2204) . BIND(((?step2204 + ?targetMotifMatchRegionMatchBeginPositionMF_02074194) - 1) AS ?thisPositionOn61) . BIND(?thisPositionOn61 AS ?thisPositionOn62) . BIND(?this AS ?pfs1t205) . BIND(URI(CONCAT(STR(?thisSequence), '#position', STR(?thisPositionOn61))) AS ?pfsb58) . BIND(URI(CONCAT(STR(?thisSequence), '#position', STR(?thisPositionOn62))) AS ?pfse59) . FILTER (REGEX('[IV]', SUBSTR(?thisSequenceValue, ?thisPositionOn61, 1))) . BIND(URI(CONCAT(STR(?this), '#MF_02074a57')) AS ?annotation57) . BIND(?this AS ?pfs56) . } OPTIONAL { ?this up:sequence ?thisSequence . ?thisSequence rdf:value ?thisSequenceValue . ?templateMotifMatch210 faldo:location ?templateMotifSequenceMatchRegionQ48MT7211 ; edam:is_output_of ?templateMotifSequenceProfileAlignmentOperationQ48MT7213 ; rdf:type edam:data_0869 ; rdf:value ?templateMotifCigarQ48MT7MF_02074206 . ?templateMotifSequenceMatchRegionQ48MT7211 faldo:begin ?templateMotifSequenceMatchBeginQ48MT7212 . ?templateMotifSequenceMatchBeginQ48MT7212 faldo:position ?templateMotifSequenceMatchBeginPositionQ48MT7207 ; faldo:reference isoform:Q48MT7-1 . ?templateMotifSequenceProfileAlignmentOperationQ48MT7213 edam:has_input signature:MF_02074 ; rdf:type edam:operation_0300 . ?targetMotifMatch214 faldo:location ?targetMotifMatchRegionMatch215 ; edam:is_output_of ?targetMotifSequenceAlignmentOperationMF_02074217 ; rdf:type edam:data_0869 ; rdf:value ?targetMotifMatchCigarQ48MT7MF_02074208 . ?targetMotifMatchRegionMatch215 faldo:begin ?targetMotifMatchRegionMatchBeginMF_02074216 . ?targetMotifMatchRegionMatchBeginMF_02074216 faldo:position ?targetMotifMatchRegionMatchBeginPositionMF_02074209 ; faldo:reference ?thisSequence . ?targetMotifSequenceAlignmentOperationMF_02074217 edam:has_input signature:MF_02074 ; rdf:type edam:operation_0300 . BIND(STRLEN(REPLACE(SUBSTR(?templateMotifCigarQ48MT7MF_02074206, 1, (STRLEN(?templateMotifCigarQ48MT7MF_02074206) - STRLEN(REPLACE(?templateMotifCigarQ48MT7MF_02074206, CONCAT('^(?:-*[^-]){', STR(((185 - ?templateMotifSequenceMatchBeginPositionQ48MT7207) + 1)), '}'), '')))), '[a-z]', '')) AS ?step1218) . BIND((STRLEN(SUBSTR(?targetMotifMatchCigarQ48MT7MF_02074208, 1, (STRLEN(?targetMotifMatchCigarQ48MT7MF_02074208) - STRLEN(REPLACE(?targetMotifMatchCigarQ48MT7MF_02074208, CONCAT('^(?:[a-z]*(?:[A-Z]|-)){', STR(?step1218), '}'), ''))))) - STRLEN(REPLACE(SUBSTR(?targetMotifMatchCigarQ48MT7MF_02074208, 1, (STRLEN(?targetMotifMatchCigarQ48MT7MF_02074208) - STRLEN(REPLACE(?targetMotifMatchCigarQ48MT7MF_02074208, CONCAT('^(?:[a-z]*(?:[A-Z]|-)){', STR(?step1218), '}'), '')))), '[^-]', ''))) AS ?step2219) . BIND(((?step2219 + ?targetMotifMatchRegionMatchBeginPositionMF_02074209) - 1) AS ?thisPositionOn69) . BIND(?thisPositionOn69 AS ?thisPositionOn70) . BIND(?this AS ?pfs1t220) . BIND(URI(CONCAT(STR(?thisSequence), '#position', STR(?thisPositionOn69))) AS ?pfsb65) . BIND(URI(CONCAT(STR(?thisSequence), '#position', STR(?thisPositionOn70))) AS ?pfse66) . FILTER ((SUBSTR(?thisSequenceValue, ?thisPositionOn69, 1) = 'T')) . BIND(URI(CONCAT(STR(?this), '#MF_02074a64')) AS ?annotation64) . BIND(?this AS ?pfs63) . } OPTIONAL { ?this up:sequence ?thisSequence . ?thisSequence rdf:value ?thisSequenceValue . ?templateMotifMatch225 faldo:location ?templateMotifSequenceMatchRegionQ48MT7226 ; edam:is_output_of ?templateMotifSequenceProfileAlignmentOperationQ48MT7228 ; rdf:type edam:data_0869 ; rdf:value ?templateMotifCigarQ48MT7MF_02074221 . ?templateMotifSequenceMatchRegionQ48MT7226 faldo:begin ?templateMotifSequenceMatchBeginQ48MT7227 . ?templateMotifSequenceMatchBeginQ48MT7227 faldo:position ?templateMotifSequenceMatchBeginPositionQ48MT7222 ; faldo:reference isoform:Q48MT7-1 . ?templateMotifSequenceProfileAlignmentOperationQ48MT7228 edam:has_input signature:MF_02074 ; rdf:type edam:operation_0300 . ?targetMotifMatch229 faldo:location ?targetMotifMatchRegionMatch230 ; edam:is_output_of ?targetMotifSequenceAlignmentOperationMF_02074232 ; rdf:type edam:data_0869 ; rdf:value ?targetMotifMatchCigarQ48MT7MF_02074223 . ?targetMotifMatchRegionMatch230 faldo:begin ?targetMotifMatchRegionMatchBeginMF_02074231 . ?targetMotifMatchRegionMatchBeginMF_02074231 faldo:position ?targetMotifMatchRegionMatchBeginPositionMF_02074224 ; faldo:reference ?thisSequence . ?targetMotifSequenceAlignmentOperationMF_02074232 edam:has_input signature:MF_02074 ; rdf:type edam:operation_0300 . BIND(STRLEN(REPLACE(SUBSTR(?templateMotifCigarQ48MT7MF_02074221, 1, (STRLEN(?templateMotifCigarQ48MT7MF_02074221) - STRLEN(REPLACE(?templateMotifCigarQ48MT7MF_02074221, CONCAT('^(?:-*[^-]){', STR(((302 - ?templateMotifSequenceMatchBeginPositionQ48MT7222) + 1)), '}'), '')))), '[a-z]', '')) AS ?step1233) . BIND((STRLEN(SUBSTR(?targetMotifMatchCigarQ48MT7MF_02074223, 1, (STRLEN(?targetMotifMatchCigarQ48MT7MF_02074223) - STRLEN(REPLACE(?targetMotifMatchCigarQ48MT7MF_02074223, CONCAT('^(?:[a-z]*(?:[A-Z]|-)){', STR(?step1233), '}'), ''))))) - STRLEN(REPLACE(SUBSTR(?targetMotifMatchCigarQ48MT7MF_02074223, 1, (STRLEN(?targetMotifMatchCigarQ48MT7MF_02074223) - STRLEN(REPLACE(?targetMotifMatchCigarQ48MT7MF_02074223, CONCAT('^(?:[a-z]*(?:[A-Z]|-)){', STR(?step1233), '}'), '')))), '[^-]', ''))) AS ?step2234) . BIND(((?step2234 + ?targetMotifMatchRegionMatchBeginPositionMF_02074224) - 1) AS ?thisPositionOn76) . BIND(?thisPositionOn76 AS ?thisPositionOn77) . BIND(?this AS ?pfs1t235) . BIND(URI(CONCAT(STR(?thisSequence), '#position', STR(?thisPositionOn76))) AS ?pfsb73) . BIND(URI(CONCAT(STR(?thisSequence), '#position', STR(?thisPositionOn77))) AS ?pfse74) . FILTER ((SUBSTR(?thisSequenceValue, ?thisPositionOn76, 1) = 'D')) . BIND(URI(CONCAT(STR(?this), '#MF_02074a72')) AS ?annotation72) . BIND(?this AS ?pfs71) . } OPTIONAL { ?this up:sequence ?thisSequence . ?thisSequence rdf:value ?thisSequenceValue . ?templateMotifMatch240 faldo:location ?templateMotifSequenceMatchRegionQ48MT7241 ; edam:is_output_of ?templateMotifSequenceProfileAlignmentOperationQ48MT7243 ; rdf:type edam:data_0869 ; rdf:value ?templateMotifCigarQ48MT7MF_02074236 . ?templateMotifSequenceMatchRegionQ48MT7241 faldo:begin ?templateMotifSequenceMatchBeginQ48MT7242 . ?templateMotifSequenceMatchBeginQ48MT7242 faldo:position ?templateMotifSequenceMatchBeginPositionQ48MT7237 ; faldo:reference isoform:Q48MT7-1 . ?templateMotifSequenceProfileAlignmentOperationQ48MT7243 edam:has_input signature:MF_02074 ; rdf:type edam:operation_0300 . ?targetMotifMatch244 faldo:location ?targetMotifMatchRegionMatch245 ; edam:is_output_of ?targetMotifSequenceAlignmentOperationMF_02074247 ; rdf:type edam:data_0869 ; rdf:value ?targetMotifMatchCigarQ48MT7MF_02074238 . ?targetMotifMatchRegionMatch245 faldo:begin ?targetMotifMatchRegionMatchBeginMF_02074246 . ?targetMotifMatchRegionMatchBeginMF_02074246 faldo:position ?targetMotifMatchRegionMatchBeginPositionMF_02074239 ; faldo:reference ?thisSequence . ?targetMotifSequenceAlignmentOperationMF_02074247 edam:has_input signature:MF_02074 ; rdf:type edam:operation_0300 . BIND(STRLEN(REPLACE(SUBSTR(?templateMotifCigarQ48MT7MF_02074236, 1, (STRLEN(?templateMotifCigarQ48MT7MF_02074236) - STRLEN(REPLACE(?templateMotifCigarQ48MT7MF_02074236, CONCAT('^(?:-*[^-]){', STR(((308 - ?templateMotifSequenceMatchBeginPositionQ48MT7237) + 1)), '}'), '')))), '[a-z]', '')) AS ?step1248) . BIND((STRLEN(SUBSTR(?targetMotifMatchCigarQ48MT7MF_02074238, 1, (STRLEN(?targetMotifMatchCigarQ48MT7MF_02074238) - STRLEN(REPLACE(?targetMotifMatchCigarQ48MT7MF_02074238, CONCAT('^(?:[a-z]*(?:[A-Z]|-)){', STR(?step1248), '}'), ''))))) - STRLEN(REPLACE(SUBSTR(?targetMotifMatchCigarQ48MT7MF_02074238, 1, (STRLEN(?targetMotifMatchCigarQ48MT7MF_02074238) - STRLEN(REPLACE(?targetMotifMatchCigarQ48MT7MF_02074238, CONCAT('^(?:[a-z]*(?:[A-Z]|-)){', STR(?step1248), '}'), '')))), '[^-]', ''))) AS ?step2249) . BIND(((?step2249 + ?targetMotifMatchRegionMatchBeginPositionMF_02074239) - 1) AS ?thisPositionOn84) . BIND(?thisPositionOn84 AS ?thisPositionOn85) . BIND(?this AS ?pfs1t250) . BIND(URI(CONCAT(STR(?thisSequence), '#position', STR(?thisPositionOn84))) AS ?pfsb80) . BIND(URI(CONCAT(STR(?thisSequence), '#position', STR(?thisPositionOn85))) AS ?pfse81) . FILTER ((SUBSTR(?thisSequenceValue, ?thisPositionOn84, 1) = 'R')) . BIND(URI(CONCAT(STR(?this), '#MF_02074a79')) AS ?annotation79) . BIND(?this AS ?pfs78) . } OPTIONAL { ?this up:sequence ?thisSequence . ?thisSequence rdf:value ?thisSequenceValue . ?templateMotifMatch255 faldo:location ?templateMotifSequenceMatchRegionQ48MT7256 ; edam:is_output_of ?templateMotifSequenceProfileAlignmentOperationQ48MT7258 ; rdf:type edam:data_0869 ; rdf:value ?templateMotifCigarQ48MT7MF_02074251 . ?templateMotifSequenceMatchRegionQ48MT7256 faldo:begin ?templateMotifSequenceMatchBeginQ48MT7257 . ?templateMotifSequenceMatchBeginQ48MT7257 faldo:position ?templateMotifSequenceMatchBeginPositionQ48MT7252 ; faldo:reference isoform:Q48MT7-1 . ?templateMotifSequenceProfileAlignmentOperationQ48MT7258 edam:has_input signature:MF_02074 ; rdf:type edam:operation_0300 . ?targetMotifMatch259 faldo:location ?targetMotifMatchRegionMatch260 ; edam:is_output_of ?targetMotifSequenceAlignmentOperationMF_02074262 ; rdf:type edam:data_0869 ; rdf:value ?targetMotifMatchCigarQ48MT7MF_02074253 . ?targetMotifMatchRegionMatch260 faldo:begin ?targetMotifMatchRegionMatchBeginMF_02074261 . ?targetMotifMatchRegionMatchBeginMF_02074261 faldo:position ?targetMotifMatchRegionMatchBeginPositionMF_02074254 ; faldo:reference ?thisSequence . ?targetMotifSequenceAlignmentOperationMF_02074262 edam:has_input signature:MF_02074 ; rdf:type edam:operation_0300 . BIND(STRLEN(REPLACE(SUBSTR(?templateMotifCigarQ48MT7MF_02074251, 1, (STRLEN(?templateMotifCigarQ48MT7MF_02074251) - STRLEN(REPLACE(?templateMotifCigarQ48MT7MF_02074251, CONCAT('^(?:-*[^-]){', STR(((309 - ?templateMotifSequenceMatchBeginPositionQ48MT7252) + 1)), '}'), '')))), '[a-z]', '')) AS ?step1263) . BIND((STRLEN(SUBSTR(?targetMotifMatchCigarQ48MT7MF_02074253, 1, (STRLEN(?targetMotifMatchCigarQ48MT7MF_02074253) - STRLEN(REPLACE(?targetMotifMatchCigarQ48MT7MF_02074253, CONCAT('^(?:[a-z]*(?:[A-Z]|-)){', STR(?step1263), '}'), ''))))) - STRLEN(REPLACE(SUBSTR(?targetMotifMatchCigarQ48MT7MF_02074253, 1, (STRLEN(?targetMotifMatchCigarQ48MT7MF_02074253) - STRLEN(REPLACE(?targetMotifMatchCigarQ48MT7MF_02074253, CONCAT('^(?:[a-z]*(?:[A-Z]|-)){', STR(?step1263), '}'), '')))), '[^-]', ''))) AS ?step2264) . BIND(((?step2264 + ?targetMotifMatchRegionMatchBeginPositionMF_02074254) - 1) AS ?thisPositionOn91) . BIND(?thisPositionOn91 AS ?thisPositionOn92) . BIND(?this AS ?pfs1t265) . BIND(URI(CONCAT(STR(?thisSequence), '#position', STR(?thisPositionOn91))) AS ?pfsb88) . BIND(URI(CONCAT(STR(?thisSequence), '#position', STR(?thisPositionOn92))) AS ?pfse89) . FILTER ((SUBSTR(?thisSequenceValue, ?thisPositionOn91, 1) = 'V')) . BIND(URI(CONCAT(STR(?this), '#MF_02074a87')) AS ?annotation87) . BIND(?this AS ?pfs86) . } }