CONSTRUCT { _:768629 up:source unirule:MF_02247 . _:768630 up:source unirule:MF_02247 . _:768631 up:source unirule:MF_02247 . _:768632 up:source unirule:MF_02247 . _:768633 up:source unirule:MF_02247 . _:768634 up:source unirule:MF_02247 . _:768635 up:source unirule:MF_02247 . _:768636 up:source unirule:MF_02247 . _:768637 up:source unirule:MF_02247 . _:768638 up:source unirule:MF_02247 . _:768639 up:source unirule:MF_02247 . _:768640 up:source unirule:MF_02247 . _:768641 up:source unirule:MF_02247 . _:768642 up:source unirule:MF_02247 . _:768643 up:source unirule:MF_02247 . _:768644 up:source unirule:MF_02247 . _:768645 up:source unirule:MF_02247 . _:768646 up:source unirule:MF_02247 . _:768647 up:source unirule:MF_02247 . _:768648 up:source unirule:MF_02247 . _:768649 up:source unirule:MF_02247 . _:768650 up:source unirule:MF_02247 . _:768651 up:source unirule:MF_02247 . _:768652 up:source unirule:MF_02247 . _:768653 up:source unirule:MF_02247 . _:768654 up:source unirule:MF_02247 . _:768655 up:source unirule:MF_02247 . _:768656 up:source unirule:MF_02247 . _:768657 up:source unirule:MF_02247 . _:768658 up:source unirule:MF_02247 . _:768659 up:source unirule:MF_02247 . _:768660 up:source unirule:MF_02247 . _:768661 up:source unirule:MF_02247 . _:768662 up:source unirule:MF_02247 . _:768663 up:source unirule:MF_02247 . _:768664 up:source unirule:MF_02247 . ?this up:alternativeName ?name1 ; up:annotation ?annotation3 , ?annotation4 , ?annotation6 , ?annotation7 , ?annotation8 ; up:classifiedWith GO:0005524 , GO:0016620 , GO:0031177 , GO:0050661 , keyword:521 , keyword:547 , keyword:560 , keyword:596 , keyword:597 , keyword:67 ; up:recommendedName ?name0 . ?name0 up:ecName '1.2.1.-' ; up:fullName 'Carboxylic acid reductase' ; up:shortName 'CAR' ; rdf:type up:Structured_Name . ?name1 up:fullName 'ATP/NADPH-dependent carboxylic acid reductase' ; rdf:type up:Structured_Name . ?gene2 skos:prefLabel 'car' . ?annotation3 a up:Function_Annotation ; rdfs:comment 'Catalyzes the ATP- and NADPH-dependent reduction of carboxylic acids to the corresponding aldehydes.' . ?annotation4 up:activity ?activity5 ; rdf:type up:Catalytic_Activity_Annotation . ?activity5 up:catalyticActivity <http://rdf.rhea-db.org/50916>. ?annotation6 up:cofactor chebi:47942 ; rdf:type up:Cofactor_Annotation ; rdfs:comment 'Binds 1 phosphopantetheine covalently.' . ?annotation7 a up:Domain_Annotation ; rdfs:comment 'The N-terminal domain likely catalyzes substrate activation by formation of an initial acyl-AMP intermediate, the central region contains the phosphopantetheine attachment site, and the C-terminal domain catalyzes the reduction by NADPH of the intermediate thioester formed from the attack of the phosphopantetheine thiol at the carbonyl carbon of acyl-AMP.' . ?annotation8 a up:Similarity_Annotation ; rdfs:comment 'Belongs to the ATP-dependent AMP-binding enzyme family. Carboxylic acid reductase subfamily.' . ?pfs9 up:annotation ?annotation10 . ?annotation10 faldo:begin ?pfsb11 ; faldo:end ?pfse12 ; up:ligand ?ligand13 ; rdf:type up:Binding_Site_Annotation . ?pfsb11 faldo:position ?thisPositionOn14 ; rdf:type faldo:ExactPosition . ?pfse12 faldo:position ?thisPositionOn15 ; rdf:type faldo:ExactPosition . ?ligand13 rdfs:subClassOf chebi:456215 . ?pfs16 up:annotation ?annotation17 . ?annotation17 faldo:begin ?pfsb18 ; faldo:end ?pfse19 ; up:ligand ?ligand20 ; rdf:type up:Binding_Site_Annotation . ?pfsb18 faldo:position ?thisPositionOn21 ; rdf:type faldo:ExactPosition . ?pfse19 faldo:position ?thisPositionOn22 ; rdf:type faldo:ExactPosition . ?ligand20 rdfs:subClassOf chebi:456215 . ?pfs23 up:annotation ?annotation24 . ?annotation24 faldo:begin ?pfsb25 ; faldo:end ?pfse26 ; up:ligand ?ligand27 ; rdf:type up:Binding_Site_Annotation . ?pfsb25 faldo:position ?thisPositionOn28 ; rdf:type faldo:ExactPosition . ?pfse26 faldo:position ?thisPositionOn29 ; rdf:type faldo:ExactPosition . ?ligand27 rdfs:subClassOf chebi:58349 . ?pfs30 up:annotation ?annotation31 . ?annotation31 faldo:begin ?pfsb32 ; faldo:end ?pfse33 ; up:ligand ?ligand34 ; rdf:type up:Binding_Site_Annotation . ?pfsb32 faldo:position ?thisPositionOn35 ; rdf:type faldo:ExactPosition . ?pfse33 faldo:position ?thisPositionOn36 ; rdf:type faldo:ExactPosition . ?ligand34 rdfs:subClassOf chebi:58349 . ?pfs37 up:annotation ?annotation38 . ?annotation38 faldo:begin ?pfsb39 ; faldo:end ?pfse40 ; up:ligand ?ligand41 ; rdf:type up:Binding_Site_Annotation . ?pfsb39 faldo:position ?thisPositionOn42 ; rdf:type faldo:ExactPosition . ?pfse40 faldo:position ?thisPositionOn43 ; rdf:type faldo:ExactPosition . ?ligand41 rdfs:subClassOf chebi:58349 . ?pfs44 up:annotation ?annotation45 . ?annotation45 faldo:begin ?pfsb46 ; faldo:end ?pfse47 ; up:ligand ?ligand48 ; rdf:type up:Binding_Site_Annotation . ?pfsb46 faldo:position ?thisPositionOn49 ; rdf:type faldo:ExactPosition . ?pfse47 faldo:position ?thisPositionOn50 ; rdf:type faldo:ExactPosition . ?ligand48 rdfs:subClassOf chebi:456215 . ?pfs51 up:annotation ?annotation52 . ?annotation52 faldo:begin ?pfsb53 ; faldo:end ?pfse54 ; up:ligand ?ligand55 ; rdf:type up:Binding_Site_Annotation . ?pfsb53 faldo:position ?thisPositionOn56 ; rdf:type faldo:ExactPosition . ?pfse54 faldo:position ?thisPositionOn57 ; rdf:type faldo:ExactPosition . ?ligand55 rdfs:subClassOf chebi:456215 . ?pfs58 up:annotation ?annotation59 . ?annotation59 faldo:begin ?pfsb60 ; faldo:end ?pfse61 ; up:ligand ?ligand62 ; rdf:type up:Binding_Site_Annotation . ?pfsb60 faldo:position ?thisPositionOn63 ; rdf:type faldo:ExactPosition . ?pfse61 faldo:position ?thisPositionOn64 ; rdf:type faldo:ExactPosition . ?ligand62 rdfs:subClassOf chebi:456215 . ?pfs65 up:annotation ?annotation66 . ?annotation66 faldo:begin ?pfsb67 ; faldo:end ?pfse68 ; up:ligand ?ligand69 ; rdf:type up:Binding_Site_Annotation . ?pfsb67 faldo:position ?thisPositionOn70 ; rdf:type faldo:ExactPosition . ?pfse68 faldo:position ?thisPositionOn71 ; rdf:type faldo:ExactPosition . ?ligand69 rdfs:subClassOf chebi:456215 . ?pfs72 up:annotation ?annotation73 . ?annotation73 faldo:begin ?pfsb74 ; faldo:end ?pfse75 ; up:ligand ?ligand76 ; rdf:type up:Binding_Site_Annotation . ?pfsb74 faldo:position ?thisPositionOn77 ; rdf:type faldo:ExactPosition . ?pfse75 faldo:position ?thisPositionOn78 ; rdf:type faldo:ExactPosition . ?ligand76 rdfs:subClassOf chebi:456215 . ?pfs79 up:annotation ?annotation80 . ?annotation80 faldo:begin ?pfsb81 ; faldo:end ?pfse82 ; up:ligand ?ligand83 ; rdf:type up:Binding_Site_Annotation . ?pfsb81 faldo:position ?thisPositionOn84 ; rdf:type faldo:ExactPosition . ?pfse82 faldo:position ?thisPositionOn85 ; rdf:type faldo:ExactPosition . ?ligand83 rdfs:subClassOf chebi:456215 . ?pfs86 up:annotation ?annotation87 . ?annotation87 faldo:begin ?pfsb88 ; faldo:end ?pfse89 ; up:ligand ?ligand90 ; rdf:type up:Binding_Site_Annotation . ?pfsb88 faldo:position ?thisPositionOn91 ; rdf:type faldo:ExactPosition . ?pfse89 faldo:position ?thisPositionOn92 ; rdf:type faldo:ExactPosition . ?ligand90 rdfs:subClassOf chebi:58349 . ?pfs93 up:annotation ?annotation94 . ?annotation94 faldo:begin ?pfsb95 ; faldo:end ?pfse96 ; up:ligand ?ligand97 ; rdf:type up:Binding_Site_Annotation . ?pfsb95 faldo:position ?thisPositionOn98 ; rdf:type faldo:ExactPosition . ?pfse96 faldo:position ?thisPositionOn99 ; rdf:type faldo:ExactPosition . ?ligand97 rdfs:subClassOf chebi:58349 . ?pfs100 up:annotation ?annotation101 . ?annotation101 faldo:begin ?pfsb102 ; faldo:end ?pfse103 ; up:ligand ?ligand104 ; rdf:type up:Binding_Site_Annotation . ?pfsb102 faldo:position ?thisPositionOn105 ; rdf:type faldo:ExactPosition . ?pfse103 faldo:position ?thisPositionOn106 ; rdf:type faldo:ExactPosition . ?ligand104 rdfs:subClassOf chebi:58349 . ?pfs107 up:annotation ?annotation108 . ?annotation108 faldo:begin ?pfsb109 ; faldo:end ?pfse110 ; up:ligand ?ligand111 ; rdf:type up:Binding_Site_Annotation . ?pfsb109 faldo:position ?thisPositionOn112 ; rdf:type faldo:ExactPosition . ?pfse110 faldo:position ?thisPositionOn113 ; rdf:type faldo:ExactPosition . ?ligand111 rdfs:subClassOf chebi:58349 . ?pfs114 up:annotation ?annotation115 . ?annotation115 faldo:begin ?pfsb116 ; faldo:end ?pfse117 ; up:ligand ?ligand118 ; rdf:type up:Binding_Site_Annotation . ?pfsb116 faldo:position ?thisPositionOn119 ; rdf:type faldo:ExactPosition . ?pfse117 faldo:position ?thisPositionOn120 ; rdf:type faldo:ExactPosition . ?ligand118 rdfs:subClassOf chebi:58349 . ?pfs121 up:annotation ?annotation122 . ?annotation122 faldo:begin ?pfsb123 ; faldo:end ?pfse124 ; up:ligand ?ligand125 ; rdf:type up:Binding_Site_Annotation . ?pfsb123 faldo:position ?thisPositionOn126 ; rdf:type faldo:ExactPosition . ?pfse124 faldo:position ?thisPositionOn127 ; rdf:type faldo:ExactPosition . ?ligand125 rdfs:subClassOf chebi:58349 . ?pfs128 up:annotation ?annotation129 . ?annotation129 faldo:begin ?pfsb130 ; faldo:end ?pfse131 ; rdf:type up:Modified_Residue_Annotation ; rdfs:comment "O-(pantetheine 4'-phosphoryl)serine" . ?pfsb130 faldo:position ?thisPositionOn132 ; rdf:type faldo:ExactPosition . ?pfse131 faldo:position ?thisPositionOn133 ; rdf:type faldo:ExactPosition . _:768665 a rdf:Statement ; up:attribution _:768629 ; rdf:subject ?this ; rdf:predicate up:recommendedName ; rdf:object ?name0 . _:768666 a rdf:Statement ; up:attribution _:768630 ; rdf:subject ?this ; rdf:predicate up:alternativeName ; rdf:object ?name1 . _:768667 a rdf:Statement ; up:attribution _:768631 ; rdf:subject ?gene2 ; rdf:predicate up:encodedBy ; rdf:object ?gene2 . _:768668 a rdf:Statement ; up:attribution _:768632 ; rdf:subject ?this ; rdf:predicate up:annotation ; rdf:object ?annotation3 . _:768669 a rdf:Statement ; up:attribution _:768633 ; rdf:subject ?this ; rdf:predicate up:annotation ; rdf:object ?annotation4 . _:768670 a rdf:Statement ; up:attribution _:768634 ; rdf:subject ?this ; rdf:predicate up:annotation ; rdf:object ?annotation6 . _:768671 a rdf:Statement ; up:attribution _:768635 ; rdf:subject ?this ; rdf:predicate up:annotation ; rdf:object ?annotation7 . _:768672 a rdf:Statement ; up:attribution _:768636 ; rdf:subject ?this ; rdf:predicate up:annotation ; rdf:object ?annotation8 . _:768673 a rdf:Statement ; up:attribution _:768637 ; rdf:subject ?this ; rdf:predicate up:classifiedWith ; rdf:object keyword:67 . _:768674 a rdf:Statement ; up:attribution _:768638 ; rdf:subject ?this ; rdf:predicate up:classifiedWith ; rdf:object keyword:521 . _:768675 a rdf:Statement ; up:attribution _:768639 ; rdf:subject ?this ; rdf:predicate up:classifiedWith ; rdf:object keyword:547 . _:768676 a rdf:Statement ; up:attribution _:768640 ; rdf:subject ?this ; rdf:predicate up:classifiedWith ; rdf:object keyword:560 . _:768677 a rdf:Statement ; up:attribution _:768641 ; rdf:subject ?this ; rdf:predicate up:classifiedWith ; rdf:object keyword:596 . _:768678 a rdf:Statement ; up:attribution _:768642 ; rdf:subject ?this ; rdf:predicate up:classifiedWith ; rdf:object keyword:597 . _:768679 a rdf:Statement ; up:attribution _:768643 ; rdf:subject ?this ; rdf:predicate up:classifiedWith ; rdf:object GO:0005524 . _:768680 a rdf:Statement ; up:attribution _:768644 ; rdf:subject ?this ; rdf:predicate up:classifiedWith ; rdf:object GO:0050661 . _:768681 a rdf:Statement ; up:attribution _:768645 ; rdf:subject ?this ; rdf:predicate up:classifiedWith ; rdf:object GO:0016620 . _:768682 a rdf:Statement ; up:attribution _:768646 ; rdf:subject ?this ; rdf:predicate up:classifiedWith ; rdf:object GO:0031177 . _:768683 a rdf:Statement ; up:source unirule:MF_02247 ; rdf:subject ?pfs9 ; rdf:predicate up:annotation ; rdf:object ?annotation10 . _:768684 a rdf:Statement ; up:attribution _:768647 ; rdf:subject ?pfs9 ; rdf:predicate up:annotation ; rdf:object ?annotation10 . _:768685 a rdf:Statement ; up:source unirule:MF_02247 ; rdf:subject ?pfs16 ; rdf:predicate up:annotation ; rdf:object ?annotation17 . _:768686 a rdf:Statement ; up:attribution _:768648 ; rdf:subject ?pfs16 ; rdf:predicate up:annotation ; rdf:object ?annotation17 . _:768687 a rdf:Statement ; up:source unirule:MF_02247 ; rdf:subject ?pfs23 ; rdf:predicate up:annotation ; rdf:object ?annotation24 . _:768688 a rdf:Statement ; up:attribution _:768649 ; rdf:subject ?pfs23 ; rdf:predicate up:annotation ; rdf:object ?annotation24 . _:768689 a rdf:Statement ; up:source unirule:MF_02247 ; rdf:subject ?pfs30 ; rdf:predicate up:annotation ; rdf:object ?annotation31 . _:768690 a rdf:Statement ; up:attribution _:768650 ; rdf:subject ?pfs30 ; rdf:predicate up:annotation ; rdf:object ?annotation31 . _:768691 a rdf:Statement ; up:source unirule:MF_02247 ; rdf:subject ?pfs37 ; rdf:predicate up:annotation ; rdf:object ?annotation38 . _:768692 a rdf:Statement ; up:attribution _:768651 ; rdf:subject ?pfs37 ; rdf:predicate up:annotation ; rdf:object ?annotation38 . _:768693 a rdf:Statement ; up:source unirule:MF_02247 ; rdf:subject ?pfs44 ; rdf:predicate up:annotation ; rdf:object ?annotation45 . _:768694 a rdf:Statement ; up:attribution _:768652 ; rdf:subject ?pfs44 ; rdf:predicate up:annotation ; rdf:object ?annotation45 . _:768695 a rdf:Statement ; up:source unirule:MF_02247 ; rdf:subject ?pfs51 ; rdf:predicate up:annotation ; rdf:object ?annotation52 . _:768696 a rdf:Statement ; up:attribution _:768653 ; rdf:subject ?pfs51 ; rdf:predicate up:annotation ; rdf:object ?annotation52 . _:768697 a rdf:Statement ; up:source unirule:MF_02247 ; rdf:subject ?pfs58 ; rdf:predicate up:annotation ; rdf:object ?annotation59 . _:768698 a rdf:Statement ; up:attribution _:768654 ; rdf:subject ?pfs58 ; rdf:predicate up:annotation ; rdf:object ?annotation59 . _:768699 a rdf:Statement ; up:source unirule:MF_02247 ; rdf:subject ?pfs65 ; rdf:predicate up:annotation ; rdf:object ?annotation66 . _:768700 a rdf:Statement ; up:attribution _:768655 ; rdf:subject ?pfs65 ; rdf:predicate up:annotation ; rdf:object ?annotation66 . _:768701 a rdf:Statement ; up:source unirule:MF_02247 ; rdf:subject ?pfs72 ; rdf:predicate up:annotation ; rdf:object ?annotation73 . _:768702 a rdf:Statement ; up:attribution _:768656 ; rdf:subject ?pfs72 ; rdf:predicate up:annotation ; rdf:object ?annotation73 . _:768703 a rdf:Statement ; up:source unirule:MF_02247 ; rdf:subject ?pfs79 ; rdf:predicate up:annotation ; rdf:object ?annotation80 . _:768704 a rdf:Statement ; up:attribution _:768657 ; rdf:subject ?pfs79 ; rdf:predicate up:annotation ; rdf:object ?annotation80 . _:768705 a rdf:Statement ; up:source unirule:MF_02247 ; rdf:subject ?pfs86 ; rdf:predicate up:annotation ; rdf:object ?annotation87 . _:768706 a rdf:Statement ; up:attribution _:768658 ; rdf:subject ?pfs86 ; rdf:predicate up:annotation ; rdf:object ?annotation87 . _:768707 a rdf:Statement ; up:source unirule:MF_02247 ; rdf:subject ?pfs93 ; rdf:predicate up:annotation ; rdf:object ?annotation94 . _:768708 a rdf:Statement ; up:attribution _:768659 ; rdf:subject ?pfs93 ; rdf:predicate up:annotation ; rdf:object ?annotation94 . _:768709 a rdf:Statement ; up:source unirule:MF_02247 ; rdf:subject ?pfs100 ; rdf:predicate up:annotation ; rdf:object ?annotation101 . _:768710 a rdf:Statement ; up:attribution _:768660 ; rdf:subject ?pfs100 ; rdf:predicate up:annotation ; rdf:object ?annotation101 . _:768711 a rdf:Statement ; up:source unirule:MF_02247 ; rdf:subject ?pfs107 ; rdf:predicate up:annotation ; rdf:object ?annotation108 . _:768712 a rdf:Statement ; up:attribution _:768661 ; rdf:subject ?pfs107 ; rdf:predicate up:annotation ; rdf:object ?annotation108 . _:768713 a rdf:Statement ; up:source unirule:MF_02247 ; rdf:subject ?pfs114 ; rdf:predicate up:annotation ; rdf:object ?annotation115 . _:768714 a rdf:Statement ; up:attribution _:768662 ; rdf:subject ?pfs114 ; rdf:predicate up:annotation ; rdf:object ?annotation115 . _:768715 a rdf:Statement ; up:source unirule:MF_02247 ; rdf:subject ?pfs121 ; rdf:predicate up:annotation ; rdf:object ?annotation122 . _:768716 a rdf:Statement ; up:attribution _:768663 ; rdf:subject ?pfs121 ; rdf:predicate up:annotation ; rdf:object ?annotation122 . _:768717 a rdf:Statement ; up:source unirule:MF_02247 ; rdf:subject ?pfs128 ; rdf:predicate up:annotation ; rdf:object ?annotation129 . _:768718 a rdf:Statement ; up:attribution _:768664 ; rdf:subject ?pfs128 ; rdf:predicate up:annotation ; rdf:object ?annotation129 . } WHERE { #baseURI: http://purl.uniprot.org/unirule/MF_02247 #Rule MF_02247 Created by:crivoire on:2021-03-01 Modified by:ecastro on:2023-06-01 ?this up:organism ?thisOrganism ; rdfs:seeAlso signature:MF_02247 . ?thisOrganism rdfs:subClassOf+ taxon:201174 . BIND(URI(CONCAT(STR(?this), '#MF_02247a0')) AS ?name0) . BIND(URI(CONCAT(STR(?this), '#MF_02247a1')) AS ?name1) . BIND(URI(CONCAT(STR(?this), '#MF_02247a3')) AS ?annotation3) . BIND(URI(CONCAT(STR(?this), '#MF_02247a4')) AS ?annotation4) . BIND(URI(CONCAT(STR(?this), '#MF_02247a6')) AS ?annotation6) . BIND(URI(CONCAT(STR(?this), '#MF_02247a7')) AS ?annotation7) . BIND(URI(CONCAT(STR(?this), '#MF_02247a8')) AS ?annotation8) . OPTIONAL { ?this up:sequence ?thisSequence . ?thisSequence rdf:value ?thisSequenceValue . ?templateMotifMatch138 faldo:location ?templateMotifSequenceMatchRegionE5XP76139 ; edam:is_output_of ?templateMotifSequenceProfileAlignmentOperationE5XP76141 ; rdf:type edam:data_0869 ; rdf:value ?templateMotifCigarE5XP76MF_02247134 . ?templateMotifSequenceMatchRegionE5XP76139 faldo:begin ?templateMotifSequenceMatchBeginE5XP76140 . ?templateMotifSequenceMatchBeginE5XP76140 faldo:position ?templateMotifSequenceMatchBeginPositionE5XP76135 ; faldo:reference isoform:E5XP76-1 . ?templateMotifSequenceProfileAlignmentOperationE5XP76141 edam:has_input signature:MF_02247 ; rdf:type edam:operation_0300 . ?targetMotifMatch142 faldo:location ?targetMotifMatchRegionMatch143 ; edam:is_output_of ?targetMotifSequenceAlignmentOperationMF_02247145 ; rdf:type edam:data_0869 ; rdf:value ?targetMotifMatchCigarE5XP76MF_02247136 . ?targetMotifMatchRegionMatch143 faldo:begin ?targetMotifMatchRegionMatchBeginMF_02247144 . ?targetMotifMatchRegionMatchBeginMF_02247144 faldo:position ?targetMotifMatchRegionMatchBeginPositionMF_02247137 ; faldo:reference ?thisSequence . ?targetMotifSequenceAlignmentOperationMF_02247145 edam:has_input signature:MF_02247 ; rdf:type edam:operation_0300 . BIND(STRLEN(REPLACE(SUBSTR(?templateMotifCigarE5XP76MF_02247134, 1, (STRLEN(?templateMotifCigarE5XP76MF_02247134) - STRLEN(REPLACE(?templateMotifCigarE5XP76MF_02247134, CONCAT('^(?:-*[^-]){', STR(((429 - ?templateMotifSequenceMatchBeginPositionE5XP76135) + 1)), '}'), '')))), '[a-z]', '')) AS ?step1146) . BIND((STRLEN(SUBSTR(?targetMotifMatchCigarE5XP76MF_02247136, 1, (STRLEN(?targetMotifMatchCigarE5XP76MF_02247136) - STRLEN(REPLACE(?targetMotifMatchCigarE5XP76MF_02247136, CONCAT('^(?:[a-z]*(?:[A-Z]|-)){', STR(?step1146), '}'), ''))))) - STRLEN(REPLACE(SUBSTR(?targetMotifMatchCigarE5XP76MF_02247136, 1, (STRLEN(?targetMotifMatchCigarE5XP76MF_02247136) - STRLEN(REPLACE(?targetMotifMatchCigarE5XP76MF_02247136, CONCAT('^(?:[a-z]*(?:[A-Z]|-)){', STR(?step1146), '}'), '')))), '[^-]', ''))) AS ?step2147) . BIND(((?step2147 + ?targetMotifMatchRegionMatchBeginPositionMF_02247137) - 1) AS ?thisPositionOn14) . BIND(STRLEN(REPLACE(SUBSTR(?templateMotifCigarE5XP76MF_02247134, 1, (STRLEN(?templateMotifCigarE5XP76MF_02247134) - STRLEN(REPLACE(?templateMotifCigarE5XP76MF_02247134, CONCAT('^(?:-*[^-]){', STR(((430 - ?templateMotifSequenceMatchBeginPositionE5XP76135) + 1)), '}'), '')))), '[a-z]', '')) AS ?step1148) . BIND((STRLEN(SUBSTR(?targetMotifMatchCigarE5XP76MF_02247136, 1, (STRLEN(?targetMotifMatchCigarE5XP76MF_02247136) - STRLEN(REPLACE(?targetMotifMatchCigarE5XP76MF_02247136, CONCAT('^(?:[a-z]*(?:[A-Z]|-)){', STR(?step1148), '}'), ''))))) - STRLEN(REPLACE(SUBSTR(?targetMotifMatchCigarE5XP76MF_02247136, 1, (STRLEN(?targetMotifMatchCigarE5XP76MF_02247136) - STRLEN(REPLACE(?targetMotifMatchCigarE5XP76MF_02247136, CONCAT('^(?:[a-z]*(?:[A-Z]|-)){', STR(?step1148), '}'), '')))), '[^-]', ''))) AS ?step2149) . BIND(((?step2149 + ?targetMotifMatchRegionMatchBeginPositionMF_02247137) - 1) AS ?thisPositionOn15) . BIND(?this AS ?pfs1t150) . BIND(URI(CONCAT(STR(?thisSequence), '#position', STR(?thisPositionOn14))) AS ?pfsb11) . BIND(URI(CONCAT(STR(?thisSequence), '#position', STR(?thisPositionOn15))) AS ?pfse12) . FILTER (REGEX('[DE]G', SUBSTR(?thisSequenceValue, ?thisPositionOn14, (?thisPositionOn15 - ?thisPositionOn14)))) . BIND(URI(CONCAT(STR(?this), '#MF_02247a10')) AS ?annotation10) . BIND(?this AS ?pfs9) . } OPTIONAL { ?this up:sequence ?thisSequence . ?thisSequence rdf:value ?thisSequenceValue . ?templateMotifMatch155 faldo:location ?templateMotifSequenceMatchRegionE5XP76156 ; edam:is_output_of ?templateMotifSequenceProfileAlignmentOperationE5XP76158 ; rdf:type edam:data_0869 ; rdf:value ?templateMotifCigarE5XP76MF_02247151 . ?templateMotifSequenceMatchRegionE5XP76156 faldo:begin ?templateMotifSequenceMatchBeginE5XP76157 . ?templateMotifSequenceMatchBeginE5XP76157 faldo:position ?templateMotifSequenceMatchBeginPositionE5XP76152 ; faldo:reference isoform:E5XP76-1 . ?templateMotifSequenceProfileAlignmentOperationE5XP76158 edam:has_input signature:MF_02247 ; rdf:type edam:operation_0300 . ?targetMotifMatch159 faldo:location ?targetMotifMatchRegionMatch160 ; edam:is_output_of ?targetMotifSequenceAlignmentOperationMF_02247162 ; rdf:type edam:data_0869 ; rdf:value ?targetMotifMatchCigarE5XP76MF_02247153 . ?targetMotifMatchRegionMatch160 faldo:begin ?targetMotifMatchRegionMatchBeginMF_02247161 . ?targetMotifMatchRegionMatchBeginMF_02247161 faldo:position ?targetMotifMatchRegionMatchBeginPositionMF_02247154 ; faldo:reference ?thisSequence . ?targetMotifSequenceAlignmentOperationMF_02247162 edam:has_input signature:MF_02247 ; rdf:type edam:operation_0300 . BIND(STRLEN(REPLACE(SUBSTR(?templateMotifCigarE5XP76MF_02247151, 1, (STRLEN(?templateMotifCigarE5XP76MF_02247151) - STRLEN(REPLACE(?templateMotifCigarE5XP76MF_02247151, CONCAT('^(?:-*[^-]){', STR(((519 - ?templateMotifSequenceMatchBeginPositionE5XP76152) + 1)), '}'), '')))), '[a-z]', '')) AS ?step1163) . BIND((STRLEN(SUBSTR(?targetMotifMatchCigarE5XP76MF_02247153, 1, (STRLEN(?targetMotifMatchCigarE5XP76MF_02247153) - STRLEN(REPLACE(?targetMotifMatchCigarE5XP76MF_02247153, CONCAT('^(?:[a-z]*(?:[A-Z]|-)){', STR(?step1163), '}'), ''))))) - STRLEN(REPLACE(SUBSTR(?targetMotifMatchCigarE5XP76MF_02247153, 1, (STRLEN(?targetMotifMatchCigarE5XP76MF_02247153) - STRLEN(REPLACE(?targetMotifMatchCigarE5XP76MF_02247153, CONCAT('^(?:[a-z]*(?:[A-Z]|-)){', STR(?step1163), '}'), '')))), '[^-]', ''))) AS ?step2164) . BIND(((?step2164 + ?targetMotifMatchRegionMatchBeginPositionMF_02247154) - 1) AS ?thisPositionOn21) . BIND(STRLEN(REPLACE(SUBSTR(?templateMotifCigarE5XP76MF_02247151, 1, (STRLEN(?templateMotifCigarE5XP76MF_02247151) - STRLEN(REPLACE(?templateMotifCigarE5XP76MF_02247151, CONCAT('^(?:-*[^-]){', STR(((522 - ?templateMotifSequenceMatchBeginPositionE5XP76152) + 1)), '}'), '')))), '[a-z]', '')) AS ?step1165) . BIND((STRLEN(SUBSTR(?targetMotifMatchCigarE5XP76MF_02247153, 1, (STRLEN(?targetMotifMatchCigarE5XP76MF_02247153) - STRLEN(REPLACE(?targetMotifMatchCigarE5XP76MF_02247153, CONCAT('^(?:[a-z]*(?:[A-Z]|-)){', STR(?step1165), '}'), ''))))) - STRLEN(REPLACE(SUBSTR(?targetMotifMatchCigarE5XP76MF_02247153, 1, (STRLEN(?targetMotifMatchCigarE5XP76MF_02247153) - STRLEN(REPLACE(?targetMotifMatchCigarE5XP76MF_02247153, CONCAT('^(?:[a-z]*(?:[A-Z]|-)){', STR(?step1165), '}'), '')))), '[^-]', ''))) AS ?step2166) . BIND(((?step2166 + ?targetMotifMatchRegionMatchBeginPositionMF_02247154) - 1) AS ?thisPositionOn22) . BIND(?this AS ?pfs1t167) . BIND(URI(CONCAT(STR(?thisSequence), '#position', STR(?thisPositionOn21))) AS ?pfsb18) . BIND(URI(CONCAT(STR(?thisSequence), '#position', STR(?thisPositionOn22))) AS ?pfse19) . FILTER (REGEX('Y[VL]DR', SUBSTR(?thisSequenceValue, ?thisPositionOn21, (?thisPositionOn22 - ?thisPositionOn21)))) . BIND(URI(CONCAT(STR(?this), '#MF_02247a17')) AS ?annotation17) . BIND(?this AS ?pfs16) . } OPTIONAL { ?this up:sequence ?thisSequence . ?thisSequence rdf:value ?thisSequenceValue . ?templateMotifMatch172 faldo:location ?templateMotifSequenceMatchRegionE5XP76173 ; edam:is_output_of ?templateMotifSequenceProfileAlignmentOperationE5XP76175 ; rdf:type edam:data_0869 ; rdf:value ?templateMotifCigarE5XP76MF_02247168 . ?templateMotifSequenceMatchRegionE5XP76173 faldo:begin ?templateMotifSequenceMatchBeginE5XP76174 . ?templateMotifSequenceMatchBeginE5XP76174 faldo:position ?templateMotifSequenceMatchBeginPositionE5XP76169 ; faldo:reference isoform:E5XP76-1 . ?templateMotifSequenceProfileAlignmentOperationE5XP76175 edam:has_input signature:MF_02247 ; rdf:type edam:operation_0300 . ?targetMotifMatch176 faldo:location ?targetMotifMatchRegionMatch177 ; edam:is_output_of ?targetMotifSequenceAlignmentOperationMF_02247179 ; rdf:type edam:data_0869 ; rdf:value ?targetMotifMatchCigarE5XP76MF_02247170 . ?targetMotifMatchRegionMatch177 faldo:begin ?targetMotifMatchRegionMatchBeginMF_02247178 . ?targetMotifMatchRegionMatchBeginMF_02247178 faldo:position ?targetMotifMatchRegionMatchBeginPositionMF_02247171 ; faldo:reference ?thisSequence . ?targetMotifSequenceAlignmentOperationMF_02247179 edam:has_input signature:MF_02247 ; rdf:type edam:operation_0300 . BIND(STRLEN(REPLACE(SUBSTR(?templateMotifCigarE5XP76MF_02247168, 1, (STRLEN(?templateMotifCigarE5XP76MF_02247168) - STRLEN(REPLACE(?templateMotifCigarE5XP76MF_02247168, CONCAT('^(?:-*[^-]){', STR(((801 - ?templateMotifSequenceMatchBeginPositionE5XP76169) + 1)), '}'), '')))), '[a-z]', '')) AS ?step1180) . BIND((STRLEN(SUBSTR(?targetMotifMatchCigarE5XP76MF_02247170, 1, (STRLEN(?targetMotifMatchCigarE5XP76MF_02247170) - STRLEN(REPLACE(?targetMotifMatchCigarE5XP76MF_02247170, CONCAT('^(?:[a-z]*(?:[A-Z]|-)){', STR(?step1180), '}'), ''))))) - STRLEN(REPLACE(SUBSTR(?targetMotifMatchCigarE5XP76MF_02247170, 1, (STRLEN(?targetMotifMatchCigarE5XP76MF_02247170) - STRLEN(REPLACE(?targetMotifMatchCigarE5XP76MF_02247170, CONCAT('^(?:[a-z]*(?:[A-Z]|-)){', STR(?step1180), '}'), '')))), '[^-]', ''))) AS ?step2181) . BIND(((?step2181 + ?targetMotifMatchRegionMatchBeginPositionMF_02247171) - 1) AS ?thisPositionOn28) . BIND(STRLEN(REPLACE(SUBSTR(?templateMotifCigarE5XP76MF_02247168, 1, (STRLEN(?templateMotifCigarE5XP76MF_02247168) - STRLEN(REPLACE(?templateMotifCigarE5XP76MF_02247168, CONCAT('^(?:-*[^-]){', STR(((804 - ?templateMotifSequenceMatchBeginPositionE5XP76169) + 1)), '}'), '')))), '[a-z]', '')) AS ?step1182) . BIND((STRLEN(SUBSTR(?targetMotifMatchCigarE5XP76MF_02247170, 1, (STRLEN(?targetMotifMatchCigarE5XP76MF_02247170) - STRLEN(REPLACE(?targetMotifMatchCigarE5XP76MF_02247170, CONCAT('^(?:[a-z]*(?:[A-Z]|-)){', STR(?step1182), '}'), ''))))) - STRLEN(REPLACE(SUBSTR(?targetMotifMatchCigarE5XP76MF_02247170, 1, (STRLEN(?targetMotifMatchCigarE5XP76MF_02247170) - STRLEN(REPLACE(?targetMotifMatchCigarE5XP76MF_02247170, CONCAT('^(?:[a-z]*(?:[A-Z]|-)){', STR(?step1182), '}'), '')))), '[^-]', ''))) AS ?step2183) . BIND(((?step2183 + ?targetMotifMatchRegionMatchBeginPositionMF_02247171) - 1) AS ?thisPositionOn29) . BIND(?this AS ?pfs1t184) . BIND(URI(CONCAT(STR(?thisSequence), '#position', STR(?thisPositionOn28))) AS ?pfsb25) . BIND(URI(CONCAT(STR(?thisSequence), '#position', STR(?thisPositionOn29))) AS ?pfse26) . FILTER (REGEX('[NT]G[FYW]L', SUBSTR(?thisSequenceValue, ?thisPositionOn28, (?thisPositionOn29 - ?thisPositionOn28)))) . BIND(URI(CONCAT(STR(?this), '#MF_02247a24')) AS ?annotation24) . BIND(?this AS ?pfs23) . } OPTIONAL { ?this up:sequence ?thisSequence . ?thisSequence rdf:value ?thisSequenceValue . ?templateMotifMatch189 faldo:location ?templateMotifSequenceMatchRegionE5XP76190 ; edam:is_output_of ?templateMotifSequenceProfileAlignmentOperationE5XP76192 ; rdf:type edam:data_0869 ; rdf:value ?templateMotifCigarE5XP76MF_02247185 . ?templateMotifSequenceMatchRegionE5XP76190 faldo:begin ?templateMotifSequenceMatchBeginE5XP76191 . ?templateMotifSequenceMatchBeginE5XP76191 faldo:position ?templateMotifSequenceMatchBeginPositionE5XP76186 ; faldo:reference isoform:E5XP76-1 . ?templateMotifSequenceProfileAlignmentOperationE5XP76192 edam:has_input signature:MF_02247 ; rdf:type edam:operation_0300 . ?targetMotifMatch193 faldo:location ?targetMotifMatchRegionMatch194 ; edam:is_output_of ?targetMotifSequenceAlignmentOperationMF_02247196 ; rdf:type edam:data_0869 ; rdf:value ?targetMotifMatchCigarE5XP76MF_02247187 . ?targetMotifMatchRegionMatch194 faldo:begin ?targetMotifMatchRegionMatchBeginMF_02247195 . ?targetMotifMatchRegionMatchBeginMF_02247195 faldo:position ?targetMotifMatchRegionMatchBeginPositionMF_02247188 ; faldo:reference ?thisSequence . ?targetMotifSequenceAlignmentOperationMF_02247196 edam:has_input signature:MF_02247 ; rdf:type edam:operation_0300 . BIND(STRLEN(REPLACE(SUBSTR(?templateMotifCigarE5XP76MF_02247185, 1, (STRLEN(?templateMotifCigarE5XP76MF_02247185) - STRLEN(REPLACE(?templateMotifCigarE5XP76MF_02247185, CONCAT('^(?:-*[^-]){', STR(((868 - ?templateMotifSequenceMatchBeginPositionE5XP76186) + 1)), '}'), '')))), '[a-z]', '')) AS ?step1197) . BIND((STRLEN(SUBSTR(?targetMotifMatchCigarE5XP76MF_02247187, 1, (STRLEN(?targetMotifMatchCigarE5XP76MF_02247187) - STRLEN(REPLACE(?targetMotifMatchCigarE5XP76MF_02247187, CONCAT('^(?:[a-z]*(?:[A-Z]|-)){', STR(?step1197), '}'), ''))))) - STRLEN(REPLACE(SUBSTR(?targetMotifMatchCigarE5XP76MF_02247187, 1, (STRLEN(?targetMotifMatchCigarE5XP76MF_02247187) - STRLEN(REPLACE(?targetMotifMatchCigarE5XP76MF_02247187, CONCAT('^(?:[a-z]*(?:[A-Z]|-)){', STR(?step1197), '}'), '')))), '[^-]', ''))) AS ?step2198) . BIND(((?step2198 + ?targetMotifMatchRegionMatchBeginPositionMF_02247188) - 1) AS ?thisPositionOn35) . BIND(STRLEN(REPLACE(SUBSTR(?templateMotifCigarE5XP76MF_02247185, 1, (STRLEN(?templateMotifCigarE5XP76MF_02247185) - STRLEN(REPLACE(?templateMotifCigarE5XP76MF_02247185, CONCAT('^(?:-*[^-]){', STR(((869 - ?templateMotifSequenceMatchBeginPositionE5XP76186) + 1)), '}'), '')))), '[a-z]', '')) AS ?step1199) . BIND((STRLEN(SUBSTR(?targetMotifMatchCigarE5XP76MF_02247187, 1, (STRLEN(?targetMotifMatchCigarE5XP76MF_02247187) - STRLEN(REPLACE(?targetMotifMatchCigarE5XP76MF_02247187, CONCAT('^(?:[a-z]*(?:[A-Z]|-)){', STR(?step1199), '}'), ''))))) - STRLEN(REPLACE(SUBSTR(?targetMotifMatchCigarE5XP76MF_02247187, 1, (STRLEN(?targetMotifMatchCigarE5XP76MF_02247187) - STRLEN(REPLACE(?targetMotifMatchCigarE5XP76MF_02247187, CONCAT('^(?:[a-z]*(?:[A-Z]|-)){', STR(?step1199), '}'), '')))), '[^-]', ''))) AS ?step2200) . BIND(((?step2200 + ?targetMotifMatchRegionMatchBeginPositionMF_02247188) - 1) AS ?thisPositionOn36) . BIND(?this AS ?pfs1t201) . BIND(URI(CONCAT(STR(?thisSequence), '#position', STR(?thisPositionOn35))) AS ?pfsb32) . BIND(URI(CONCAT(STR(?thisSequence), '#position', STR(?thisPositionOn36))) AS ?pfse33) . FILTER (REGEX('D[FK]', SUBSTR(?thisSequenceValue, ?thisPositionOn35, (?thisPositionOn36 - ?thisPositionOn35)))) . BIND(URI(CONCAT(STR(?this), '#MF_02247a31')) AS ?annotation31) . BIND(?this AS ?pfs30) . } OPTIONAL { ?this up:sequence ?thisSequence . ?thisSequence rdf:value ?thisSequenceValue . ?templateMotifMatch206 faldo:location ?templateMotifSequenceMatchRegionE5XP76207 ; edam:is_output_of ?templateMotifSequenceProfileAlignmentOperationE5XP76209 ; rdf:type edam:data_0869 ; rdf:value ?templateMotifCigarE5XP76MF_02247202 . ?templateMotifSequenceMatchRegionE5XP76207 faldo:begin ?templateMotifSequenceMatchBeginE5XP76208 . ?templateMotifSequenceMatchBeginE5XP76208 faldo:position ?templateMotifSequenceMatchBeginPositionE5XP76203 ; faldo:reference isoform:E5XP76-1 . ?templateMotifSequenceProfileAlignmentOperationE5XP76209 edam:has_input signature:MF_02247 ; rdf:type edam:operation_0300 . ?targetMotifMatch210 faldo:location ?targetMotifMatchRegionMatch211 ; edam:is_output_of ?targetMotifSequenceAlignmentOperationMF_02247213 ; rdf:type edam:data_0869 ; rdf:value ?targetMotifMatchCigarE5XP76MF_02247204 . ?targetMotifMatchRegionMatch211 faldo:begin ?targetMotifMatchRegionMatchBeginMF_02247212 . ?targetMotifMatchRegionMatchBeginMF_02247212 faldo:position ?targetMotifMatchRegionMatchBeginPositionMF_02247205 ; faldo:reference ?thisSequence . ?targetMotifSequenceAlignmentOperationMF_02247213 edam:has_input signature:MF_02247 ; rdf:type edam:operation_0300 . BIND(STRLEN(REPLACE(SUBSTR(?templateMotifCigarE5XP76MF_02247202, 1, (STRLEN(?templateMotifCigarE5XP76MF_02247202) - STRLEN(REPLACE(?templateMotifCigarE5XP76MF_02247202, CONCAT('^(?:-*[^-]){', STR(((894 - ?templateMotifSequenceMatchBeginPositionE5XP76203) + 1)), '}'), '')))), '[a-z]', '')) AS ?step1214) . BIND((STRLEN(SUBSTR(?targetMotifMatchCigarE5XP76MF_02247204, 1, (STRLEN(?targetMotifMatchCigarE5XP76MF_02247204) - STRLEN(REPLACE(?targetMotifMatchCigarE5XP76MF_02247204, CONCAT('^(?:[a-z]*(?:[A-Z]|-)){', STR(?step1214), '}'), ''))))) - STRLEN(REPLACE(SUBSTR(?targetMotifMatchCigarE5XP76MF_02247204, 1, (STRLEN(?targetMotifMatchCigarE5XP76MF_02247204) - STRLEN(REPLACE(?targetMotifMatchCigarE5XP76MF_02247204, CONCAT('^(?:[a-z]*(?:[A-Z]|-)){', STR(?step1214), '}'), '')))), '[^-]', ''))) AS ?step2215) . BIND(((?step2215 + ?targetMotifMatchRegionMatchBeginPositionMF_02247205) - 1) AS ?thisPositionOn42) . BIND(STRLEN(REPLACE(SUBSTR(?templateMotifCigarE5XP76MF_02247202, 1, (STRLEN(?templateMotifCigarE5XP76MF_02247202) - STRLEN(REPLACE(?templateMotifCigarE5XP76MF_02247202, CONCAT('^(?:-*[^-]){', STR(((896 - ?templateMotifSequenceMatchBeginPositionE5XP76203) + 1)), '}'), '')))), '[a-z]', '')) AS ?step1216) . BIND((STRLEN(SUBSTR(?targetMotifMatchCigarE5XP76MF_02247204, 1, (STRLEN(?targetMotifMatchCigarE5XP76MF_02247204) - STRLEN(REPLACE(?targetMotifMatchCigarE5XP76MF_02247204, CONCAT('^(?:[a-z]*(?:[A-Z]|-)){', STR(?step1216), '}'), ''))))) - STRLEN(REPLACE(SUBSTR(?targetMotifMatchCigarE5XP76MF_02247204, 1, (STRLEN(?targetMotifMatchCigarE5XP76MF_02247204) - STRLEN(REPLACE(?targetMotifMatchCigarE5XP76MF_02247204, CONCAT('^(?:[a-z]*(?:[A-Z]|-)){', STR(?step1216), '}'), '')))), '[^-]', ''))) AS ?step2217) . BIND(((?step2217 + ?targetMotifMatchRegionMatchBeginPositionMF_02247205) - 1) AS ?thisPositionOn43) . BIND(?this AS ?pfs1t218) . BIND(URI(CONCAT(STR(?thisSequence), '#position', STR(?thisPositionOn42))) AS ?pfsb39) . BIND(URI(CONCAT(STR(?thisSequence), '#position', STR(?thisPositionOn43))) AS ?pfse40) . FILTER (REGEX('[SP][GA]A', SUBSTR(?thisSequenceValue, ?thisPositionOn42, (?thisPositionOn43 - ?thisPositionOn42)))) . BIND(URI(CONCAT(STR(?this), '#MF_02247a38')) AS ?annotation38) . BIND(?this AS ?pfs37) . } OPTIONAL { ?this up:sequence ?thisSequence . ?thisSequence rdf:value ?thisSequenceValue . ?templateMotifMatch223 faldo:location ?templateMotifSequenceMatchRegionE5XP76224 ; edam:is_output_of ?templateMotifSequenceProfileAlignmentOperationE5XP76226 ; rdf:type edam:data_0869 ; rdf:value ?templateMotifCigarE5XP76MF_02247219 . ?templateMotifSequenceMatchRegionE5XP76224 faldo:begin ?templateMotifSequenceMatchBeginE5XP76225 . ?templateMotifSequenceMatchBeginE5XP76225 faldo:position ?templateMotifSequenceMatchBeginPositionE5XP76220 ; faldo:reference isoform:E5XP76-1 . ?templateMotifSequenceProfileAlignmentOperationE5XP76226 edam:has_input signature:MF_02247 ; rdf:type edam:operation_0300 . ?targetMotifMatch227 faldo:location ?targetMotifMatchRegionMatch228 ; edam:is_output_of ?targetMotifSequenceAlignmentOperationMF_02247230 ; rdf:type edam:data_0869 ; rdf:value ?targetMotifMatchCigarE5XP76MF_02247221 . ?targetMotifMatchRegionMatch228 faldo:begin ?targetMotifMatchRegionMatchBeginMF_02247229 . ?targetMotifMatchRegionMatchBeginMF_02247229 faldo:position ?targetMotifMatchRegionMatchBeginPositionMF_02247222 ; faldo:reference ?thisSequence . ?targetMotifSequenceAlignmentOperationMF_02247230 edam:has_input signature:MF_02247 ; rdf:type edam:operation_0300 . BIND(STRLEN(REPLACE(SUBSTR(?templateMotifCigarE5XP76MF_02247219, 1, (STRLEN(?templateMotifCigarE5XP76MF_02247219) - STRLEN(REPLACE(?templateMotifCigarE5XP76MF_02247219, CONCAT('^(?:-*[^-]){', STR(((315 - ?templateMotifSequenceMatchBeginPositionE5XP76220) + 1)), '}'), '')))), '[a-z]', '')) AS ?step1231) . BIND((STRLEN(SUBSTR(?targetMotifMatchCigarE5XP76MF_02247221, 1, (STRLEN(?targetMotifMatchCigarE5XP76MF_02247221) - STRLEN(REPLACE(?targetMotifMatchCigarE5XP76MF_02247221, CONCAT('^(?:[a-z]*(?:[A-Z]|-)){', STR(?step1231), '}'), ''))))) - STRLEN(REPLACE(SUBSTR(?targetMotifMatchCigarE5XP76MF_02247221, 1, (STRLEN(?targetMotifMatchCigarE5XP76MF_02247221) - STRLEN(REPLACE(?targetMotifMatchCigarE5XP76MF_02247221, CONCAT('^(?:[a-z]*(?:[A-Z]|-)){', STR(?step1231), '}'), '')))), '[^-]', ''))) AS ?step2232) . BIND(((?step2232 + ?targetMotifMatchRegionMatchBeginPositionMF_02247222) - 1) AS ?thisPositionOn49) . BIND(?thisPositionOn49 AS ?thisPositionOn50) . BIND(?this AS ?pfs1t233) . BIND(URI(CONCAT(STR(?thisSequence), '#position', STR(?thisPositionOn49))) AS ?pfsb46) . BIND(URI(CONCAT(STR(?thisSequence), '#position', STR(?thisPositionOn50))) AS ?pfse47) . FILTER ((SUBSTR(?thisSequenceValue, ?thisPositionOn49, 1) = 'H')) . BIND(URI(CONCAT(STR(?this), '#MF_02247a45')) AS ?annotation45) . BIND(?this AS ?pfs44) . } OPTIONAL { ?this up:sequence ?thisSequence . ?thisSequence rdf:value ?thisSequenceValue . ?templateMotifMatch238 faldo:location ?templateMotifSequenceMatchRegionE5XP76239 ; edam:is_output_of ?templateMotifSequenceProfileAlignmentOperationE5XP76241 ; rdf:type edam:data_0869 ; rdf:value ?templateMotifCigarE5XP76MF_02247234 . ?templateMotifSequenceMatchRegionE5XP76239 faldo:begin ?templateMotifSequenceMatchBeginE5XP76240 . ?templateMotifSequenceMatchBeginE5XP76240 faldo:position ?templateMotifSequenceMatchBeginPositionE5XP76235 ; faldo:reference isoform:E5XP76-1 . ?templateMotifSequenceProfileAlignmentOperationE5XP76241 edam:has_input signature:MF_02247 ; rdf:type edam:operation_0300 . ?targetMotifMatch242 faldo:location ?targetMotifMatchRegionMatch243 ; edam:is_output_of ?targetMotifSequenceAlignmentOperationMF_02247245 ; rdf:type edam:data_0869 ; rdf:value ?targetMotifMatchCigarE5XP76MF_02247236 . ?targetMotifMatchRegionMatch243 faldo:begin ?targetMotifMatchRegionMatchBeginMF_02247244 . ?targetMotifMatchRegionMatchBeginMF_02247244 faldo:position ?targetMotifMatchRegionMatchBeginPositionMF_02247237 ; faldo:reference ?thisSequence . ?targetMotifSequenceAlignmentOperationMF_02247245 edam:has_input signature:MF_02247 ; rdf:type edam:operation_0300 . BIND(STRLEN(REPLACE(SUBSTR(?templateMotifCigarE5XP76MF_02247234, 1, (STRLEN(?templateMotifCigarE5XP76MF_02247234) - STRLEN(REPLACE(?templateMotifCigarE5XP76MF_02247234, CONCAT('^(?:-*[^-]){', STR(((408 - ?templateMotifSequenceMatchBeginPositionE5XP76235) + 1)), '}'), '')))), '[a-z]', '')) AS ?step1246) . BIND((STRLEN(SUBSTR(?targetMotifMatchCigarE5XP76MF_02247236, 1, (STRLEN(?targetMotifMatchCigarE5XP76MF_02247236) - STRLEN(REPLACE(?targetMotifMatchCigarE5XP76MF_02247236, CONCAT('^(?:[a-z]*(?:[A-Z]|-)){', STR(?step1246), '}'), ''))))) - STRLEN(REPLACE(SUBSTR(?targetMotifMatchCigarE5XP76MF_02247236, 1, (STRLEN(?targetMotifMatchCigarE5XP76MF_02247236) - STRLEN(REPLACE(?targetMotifMatchCigarE5XP76MF_02247236, CONCAT('^(?:[a-z]*(?:[A-Z]|-)){', STR(?step1246), '}'), '')))), '[^-]', ''))) AS ?step2247) . BIND(((?step2247 + ?targetMotifMatchRegionMatchBeginPositionMF_02247237) - 1) AS ?thisPositionOn56) . BIND(?thisPositionOn56 AS ?thisPositionOn57) . BIND(?this AS ?pfs1t248) . BIND(URI(CONCAT(STR(?thisSequence), '#position', STR(?thisPositionOn56))) AS ?pfsb53) . BIND(URI(CONCAT(STR(?thisSequence), '#position', STR(?thisPositionOn57))) AS ?pfse54) . FILTER (REGEX('[ST]', SUBSTR(?thisSequenceValue, ?thisPositionOn56, 1))) . BIND(URI(CONCAT(STR(?this), '#MF_02247a52')) AS ?annotation52) . BIND(?this AS ?pfs51) . } OPTIONAL { ?this up:sequence ?thisSequence . ?thisSequence rdf:value ?thisSequenceValue . ?templateMotifMatch253 faldo:location ?templateMotifSequenceMatchRegionE5XP76254 ; edam:is_output_of ?templateMotifSequenceProfileAlignmentOperationE5XP76256 ; rdf:type edam:data_0869 ; rdf:value ?templateMotifCigarE5XP76MF_02247249 . ?templateMotifSequenceMatchRegionE5XP76254 faldo:begin ?templateMotifSequenceMatchBeginE5XP76255 . ?templateMotifSequenceMatchBeginE5XP76255 faldo:position ?templateMotifSequenceMatchBeginPositionE5XP76250 ; faldo:reference isoform:E5XP76-1 . ?templateMotifSequenceProfileAlignmentOperationE5XP76256 edam:has_input signature:MF_02247 ; rdf:type edam:operation_0300 . ?targetMotifMatch257 faldo:location ?targetMotifMatchRegionMatch258 ; edam:is_output_of ?targetMotifSequenceAlignmentOperationMF_02247260 ; rdf:type edam:data_0869 ; rdf:value ?targetMotifMatchCigarE5XP76MF_02247251 . ?targetMotifMatchRegionMatch258 faldo:begin ?targetMotifMatchRegionMatchBeginMF_02247259 . ?targetMotifMatchRegionMatchBeginMF_02247259 faldo:position ?targetMotifMatchRegionMatchBeginPositionMF_02247252 ; faldo:reference ?thisSequence . ?targetMotifSequenceAlignmentOperationMF_02247260 edam:has_input signature:MF_02247 ; rdf:type edam:operation_0300 . BIND(STRLEN(REPLACE(SUBSTR(?templateMotifCigarE5XP76MF_02247249, 1, (STRLEN(?templateMotifCigarE5XP76MF_02247249) - STRLEN(REPLACE(?templateMotifCigarE5XP76MF_02247249, CONCAT('^(?:-*[^-]){', STR(((434 - ?templateMotifSequenceMatchBeginPositionE5XP76250) + 1)), '}'), '')))), '[a-z]', '')) AS ?step1261) . BIND((STRLEN(SUBSTR(?targetMotifMatchCigarE5XP76MF_02247251, 1, (STRLEN(?targetMotifMatchCigarE5XP76MF_02247251) - STRLEN(REPLACE(?targetMotifMatchCigarE5XP76MF_02247251, CONCAT('^(?:[a-z]*(?:[A-Z]|-)){', STR(?step1261), '}'), ''))))) - STRLEN(REPLACE(SUBSTR(?targetMotifMatchCigarE5XP76MF_02247251, 1, (STRLEN(?targetMotifMatchCigarE5XP76MF_02247251) - STRLEN(REPLACE(?targetMotifMatchCigarE5XP76MF_02247251, CONCAT('^(?:[a-z]*(?:[A-Z]|-)){', STR(?step1261), '}'), '')))), '[^-]', ''))) AS ?step2262) . BIND(((?step2262 + ?targetMotifMatchRegionMatchBeginPositionMF_02247252) - 1) AS ?thisPositionOn63) . BIND(?thisPositionOn63 AS ?thisPositionOn64) . BIND(?this AS ?pfs1t263) . BIND(URI(CONCAT(STR(?thisSequence), '#position', STR(?thisPositionOn63))) AS ?pfsb60) . BIND(URI(CONCAT(STR(?thisSequence), '#position', STR(?thisPositionOn64))) AS ?pfse61) . FILTER ((SUBSTR(?thisSequenceValue, ?thisPositionOn63, 1) = 'T')) . BIND(URI(CONCAT(STR(?this), '#MF_02247a59')) AS ?annotation59) . BIND(?this AS ?pfs58) . } OPTIONAL { ?this up:sequence ?thisSequence . ?thisSequence rdf:value ?thisSequenceValue . ?templateMotifMatch268 faldo:location ?templateMotifSequenceMatchRegionE5XP76269 ; edam:is_output_of ?templateMotifSequenceProfileAlignmentOperationE5XP76271 ; rdf:type edam:data_0869 ; rdf:value ?templateMotifCigarE5XP76MF_02247264 . ?templateMotifSequenceMatchRegionE5XP76269 faldo:begin ?templateMotifSequenceMatchBeginE5XP76270 . ?templateMotifSequenceMatchBeginE5XP76270 faldo:position ?templateMotifSequenceMatchBeginPositionE5XP76265 ; faldo:reference isoform:E5XP76-1 . ?templateMotifSequenceProfileAlignmentOperationE5XP76271 edam:has_input signature:MF_02247 ; rdf:type edam:operation_0300 . ?targetMotifMatch272 faldo:location ?targetMotifMatchRegionMatch273 ; edam:is_output_of ?targetMotifSequenceAlignmentOperationMF_02247275 ; rdf:type edam:data_0869 ; rdf:value ?targetMotifMatchCigarE5XP76MF_02247266 . ?targetMotifMatchRegionMatch273 faldo:begin ?targetMotifMatchRegionMatchBeginMF_02247274 . ?targetMotifMatchRegionMatchBeginMF_02247274 faldo:position ?targetMotifMatchRegionMatchBeginPositionMF_02247267 ; faldo:reference ?thisSequence . ?targetMotifSequenceAlignmentOperationMF_02247275 edam:has_input signature:MF_02247 ; rdf:type edam:operation_0300 . BIND(STRLEN(REPLACE(SUBSTR(?templateMotifCigarE5XP76MF_02247264, 1, (STRLEN(?templateMotifCigarE5XP76MF_02247264) - STRLEN(REPLACE(?templateMotifCigarE5XP76MF_02247264, CONCAT('^(?:-*[^-]){', STR(((507 - ?templateMotifSequenceMatchBeginPositionE5XP76265) + 1)), '}'), '')))), '[a-z]', '')) AS ?step1276) . BIND((STRLEN(SUBSTR(?targetMotifMatchCigarE5XP76MF_02247266, 1, (STRLEN(?targetMotifMatchCigarE5XP76MF_02247266) - STRLEN(REPLACE(?targetMotifMatchCigarE5XP76MF_02247266, CONCAT('^(?:[a-z]*(?:[A-Z]|-)){', STR(?step1276), '}'), ''))))) - STRLEN(REPLACE(SUBSTR(?targetMotifMatchCigarE5XP76MF_02247266, 1, (STRLEN(?targetMotifMatchCigarE5XP76MF_02247266) - STRLEN(REPLACE(?targetMotifMatchCigarE5XP76MF_02247266, CONCAT('^(?:[a-z]*(?:[A-Z]|-)){', STR(?step1276), '}'), '')))), '[^-]', ''))) AS ?step2277) . BIND(((?step2277 + ?targetMotifMatchRegionMatchBeginPositionMF_02247267) - 1) AS ?thisPositionOn70) . BIND(?thisPositionOn70 AS ?thisPositionOn71) . BIND(?this AS ?pfs1t278) . BIND(URI(CONCAT(STR(?thisSequence), '#position', STR(?thisPositionOn70))) AS ?pfsb67) . BIND(URI(CONCAT(STR(?thisSequence), '#position', STR(?thisPositionOn71))) AS ?pfse68) . FILTER ((SUBSTR(?thisSequenceValue, ?thisPositionOn70, 1) = 'D')) . BIND(URI(CONCAT(STR(?this), '#MF_02247a66')) AS ?annotation66) . BIND(?this AS ?pfs65) . } OPTIONAL { ?this up:sequence ?thisSequence . ?thisSequence rdf:value ?thisSequenceValue . ?templateMotifMatch283 faldo:location ?templateMotifSequenceMatchRegionE5XP76284 ; edam:is_output_of ?templateMotifSequenceProfileAlignmentOperationE5XP76286 ; rdf:type edam:data_0869 ; rdf:value ?templateMotifCigarE5XP76MF_02247279 . ?templateMotifSequenceMatchRegionE5XP76284 faldo:begin ?templateMotifSequenceMatchBeginE5XP76285 . ?templateMotifSequenceMatchBeginE5XP76285 faldo:position ?templateMotifSequenceMatchBeginPositionE5XP76280 ; faldo:reference isoform:E5XP76-1 . ?templateMotifSequenceProfileAlignmentOperationE5XP76286 edam:has_input signature:MF_02247 ; rdf:type edam:operation_0300 . ?targetMotifMatch287 faldo:location ?targetMotifMatchRegionMatch288 ; edam:is_output_of ?targetMotifSequenceAlignmentOperationMF_02247290 ; rdf:type edam:data_0869 ; rdf:value ?targetMotifMatchCigarE5XP76MF_02247281 . ?targetMotifMatchRegionMatch288 faldo:begin ?targetMotifMatchRegionMatchBeginMF_02247289 . ?targetMotifMatchRegionMatchBeginMF_02247289 faldo:position ?targetMotifMatchRegionMatchBeginPositionMF_02247282 ; faldo:reference ?thisSequence . ?targetMotifSequenceAlignmentOperationMF_02247290 edam:has_input signature:MF_02247 ; rdf:type edam:operation_0300 . BIND(STRLEN(REPLACE(SUBSTR(?templateMotifCigarE5XP76MF_02247279, 1, (STRLEN(?templateMotifCigarE5XP76MF_02247279) - STRLEN(REPLACE(?templateMotifCigarE5XP76MF_02247279, CONCAT('^(?:-*[^-]){', STR(((528 - ?templateMotifSequenceMatchBeginPositionE5XP76280) + 1)), '}'), '')))), '[a-z]', '')) AS ?step1291) . BIND((STRLEN(SUBSTR(?targetMotifMatchCigarE5XP76MF_02247281, 1, (STRLEN(?targetMotifMatchCigarE5XP76MF_02247281) - STRLEN(REPLACE(?targetMotifMatchCigarE5XP76MF_02247281, CONCAT('^(?:[a-z]*(?:[A-Z]|-)){', STR(?step1291), '}'), ''))))) - STRLEN(REPLACE(SUBSTR(?targetMotifMatchCigarE5XP76MF_02247281, 1, (STRLEN(?targetMotifMatchCigarE5XP76MF_02247281) - STRLEN(REPLACE(?targetMotifMatchCigarE5XP76MF_02247281, CONCAT('^(?:[a-z]*(?:[A-Z]|-)){', STR(?step1291), '}'), '')))), '[^-]', ''))) AS ?step2292) . BIND(((?step2292 + ?targetMotifMatchRegionMatchBeginPositionMF_02247282) - 1) AS ?thisPositionOn77) . BIND(?thisPositionOn77 AS ?thisPositionOn78) . BIND(?this AS ?pfs1t293) . BIND(URI(CONCAT(STR(?thisSequence), '#position', STR(?thisPositionOn77))) AS ?pfsb74) . BIND(URI(CONCAT(STR(?thisSequence), '#position', STR(?thisPositionOn78))) AS ?pfse75) . FILTER ((SUBSTR(?thisSequenceValue, ?thisPositionOn77, 1) = 'K')) . BIND(URI(CONCAT(STR(?this), '#MF_02247a73')) AS ?annotation73) . BIND(?this AS ?pfs72) . } OPTIONAL { ?this up:sequence ?thisSequence . ?thisSequence rdf:value ?thisSequenceValue . ?templateMotifMatch298 faldo:location ?templateMotifSequenceMatchRegionE5XP76299 ; edam:is_output_of ?templateMotifSequenceProfileAlignmentOperationE5XP76301 ; rdf:type edam:data_0869 ; rdf:value ?templateMotifCigarE5XP76MF_02247294 . ?templateMotifSequenceMatchRegionE5XP76299 faldo:begin ?templateMotifSequenceMatchBeginE5XP76300 . ?templateMotifSequenceMatchBeginE5XP76300 faldo:position ?templateMotifSequenceMatchBeginPositionE5XP76295 ; faldo:reference isoform:E5XP76-1 . ?templateMotifSequenceProfileAlignmentOperationE5XP76301 edam:has_input signature:MF_02247 ; rdf:type edam:operation_0300 . ?targetMotifMatch302 faldo:location ?targetMotifMatchRegionMatch303 ; edam:is_output_of ?targetMotifSequenceAlignmentOperationMF_02247305 ; rdf:type edam:data_0869 ; rdf:value ?targetMotifMatchCigarE5XP76MF_02247296 . ?targetMotifMatchRegionMatch303 faldo:begin ?targetMotifMatchRegionMatchBeginMF_02247304 . ?targetMotifMatchRegionMatchBeginMF_02247304 faldo:position ?targetMotifMatchRegionMatchBeginPositionMF_02247297 ; faldo:reference ?thisSequence . ?targetMotifSequenceAlignmentOperationMF_02247305 edam:has_input signature:MF_02247 ; rdf:type edam:operation_0300 . BIND(STRLEN(REPLACE(SUBSTR(?templateMotifCigarE5XP76MF_02247294, 1, (STRLEN(?templateMotifCigarE5XP76MF_02247294) - STRLEN(REPLACE(?templateMotifCigarE5XP76MF_02247294, CONCAT('^(?:-*[^-]){', STR(((629 - ?templateMotifSequenceMatchBeginPositionE5XP76295) + 1)), '}'), '')))), '[a-z]', '')) AS ?step1306) . BIND((STRLEN(SUBSTR(?targetMotifMatchCigarE5XP76MF_02247296, 1, (STRLEN(?targetMotifMatchCigarE5XP76MF_02247296) - STRLEN(REPLACE(?targetMotifMatchCigarE5XP76MF_02247296, CONCAT('^(?:[a-z]*(?:[A-Z]|-)){', STR(?step1306), '}'), ''))))) - STRLEN(REPLACE(SUBSTR(?targetMotifMatchCigarE5XP76MF_02247296, 1, (STRLEN(?targetMotifMatchCigarE5XP76MF_02247296) - STRLEN(REPLACE(?targetMotifMatchCigarE5XP76MF_02247296, CONCAT('^(?:[a-z]*(?:[A-Z]|-)){', STR(?step1306), '}'), '')))), '[^-]', ''))) AS ?step2307) . BIND(((?step2307 + ?targetMotifMatchRegionMatchBeginPositionMF_02247297) - 1) AS ?thisPositionOn84) . BIND(?thisPositionOn84 AS ?thisPositionOn85) . BIND(?this AS ?pfs1t308) . BIND(URI(CONCAT(STR(?thisSequence), '#position', STR(?thisPositionOn84))) AS ?pfsb81) . BIND(URI(CONCAT(STR(?thisSequence), '#position', STR(?thisPositionOn85))) AS ?pfse82) . FILTER ((SUBSTR(?thisSequenceValue, ?thisPositionOn84, 1) = 'K')) . BIND(URI(CONCAT(STR(?this), '#MF_02247a80')) AS ?annotation80) . BIND(?this AS ?pfs79) . } OPTIONAL { ?this up:sequence ?thisSequence . ?thisSequence rdf:value ?thisSequenceValue . ?templateMotifMatch313 faldo:location ?templateMotifSequenceMatchRegionE5XP76314 ; edam:is_output_of ?templateMotifSequenceProfileAlignmentOperationE5XP76316 ; rdf:type edam:data_0869 ; rdf:value ?templateMotifCigarE5XP76MF_02247309 . ?templateMotifSequenceMatchRegionE5XP76314 faldo:begin ?templateMotifSequenceMatchBeginE5XP76315 . ?templateMotifSequenceMatchBeginE5XP76315 faldo:position ?templateMotifSequenceMatchBeginPositionE5XP76310 ; faldo:reference isoform:E5XP76-1 . ?templateMotifSequenceProfileAlignmentOperationE5XP76316 edam:has_input signature:MF_02247 ; rdf:type edam:operation_0300 . ?targetMotifMatch317 faldo:location ?targetMotifMatchRegionMatch318 ; edam:is_output_of ?targetMotifSequenceAlignmentOperationMF_02247320 ; rdf:type edam:data_0869 ; rdf:value ?targetMotifMatchCigarE5XP76MF_02247311 . ?targetMotifMatchRegionMatch318 faldo:begin ?targetMotifMatchRegionMatchBeginMF_02247319 . ?targetMotifMatchRegionMatchBeginMF_02247319 faldo:position ?targetMotifMatchRegionMatchBeginPositionMF_02247312 ; faldo:reference ?thisSequence . ?targetMotifSequenceAlignmentOperationMF_02247320 edam:has_input signature:MF_02247 ; rdf:type edam:operation_0300 . BIND(STRLEN(REPLACE(SUBSTR(?templateMotifCigarE5XP76MF_02247309, 1, (STRLEN(?templateMotifCigarE5XP76MF_02247309) - STRLEN(REPLACE(?templateMotifCigarE5XP76MF_02247309, CONCAT('^(?:-*[^-]){', STR(((828 - ?templateMotifSequenceMatchBeginPositionE5XP76310) + 1)), '}'), '')))), '[a-z]', '')) AS ?step1321) . BIND((STRLEN(SUBSTR(?targetMotifMatchCigarE5XP76MF_02247311, 1, (STRLEN(?targetMotifMatchCigarE5XP76MF_02247311) - STRLEN(REPLACE(?targetMotifMatchCigarE5XP76MF_02247311, CONCAT('^(?:[a-z]*(?:[A-Z]|-)){', STR(?step1321), '}'), ''))))) - STRLEN(REPLACE(SUBSTR(?targetMotifMatchCigarE5XP76MF_02247311, 1, (STRLEN(?targetMotifMatchCigarE5XP76MF_02247311) - STRLEN(REPLACE(?targetMotifMatchCigarE5XP76MF_02247311, CONCAT('^(?:[a-z]*(?:[A-Z]|-)){', STR(?step1321), '}'), '')))), '[^-]', ''))) AS ?step2322) . BIND(((?step2322 + ?targetMotifMatchRegionMatchBeginPositionMF_02247312) - 1) AS ?thisPositionOn91) . BIND(?thisPositionOn91 AS ?thisPositionOn92) . BIND(?this AS ?pfs1t323) . BIND(URI(CONCAT(STR(?thisSequence), '#position', STR(?thisPositionOn91))) AS ?pfsb88) . BIND(URI(CONCAT(STR(?thisSequence), '#position', STR(?thisPositionOn92))) AS ?pfse89) . FILTER ((SUBSTR(?thisSequenceValue, ?thisPositionOn91, 1) = 'R')) . BIND(URI(CONCAT(STR(?this), '#MF_02247a87')) AS ?annotation87) . BIND(?this AS ?pfs86) . } OPTIONAL { ?this up:sequence ?thisSequence . ?thisSequence rdf:value ?thisSequenceValue . ?templateMotifMatch328 faldo:location ?templateMotifSequenceMatchRegionE5XP76329 ; edam:is_output_of ?templateMotifSequenceProfileAlignmentOperationE5XP76331 ; rdf:type edam:data_0869 ; rdf:value ?templateMotifCigarE5XP76MF_02247324 . ?templateMotifSequenceMatchRegionE5XP76329 faldo:begin ?templateMotifSequenceMatchBeginE5XP76330 . ?templateMotifSequenceMatchBeginE5XP76330 faldo:position ?templateMotifSequenceMatchBeginPositionE5XP76325 ; faldo:reference isoform:E5XP76-1 . ?templateMotifSequenceProfileAlignmentOperationE5XP76331 edam:has_input signature:MF_02247 ; rdf:type edam:operation_0300 . ?targetMotifMatch332 faldo:location ?targetMotifMatchRegionMatch333 ; edam:is_output_of ?targetMotifSequenceAlignmentOperationMF_02247335 ; rdf:type edam:data_0869 ; rdf:value ?targetMotifMatchCigarE5XP76MF_02247326 . ?targetMotifMatchRegionMatch333 faldo:begin ?targetMotifMatchRegionMatchBeginMF_02247334 . ?targetMotifMatchRegionMatchBeginMF_02247334 faldo:position ?targetMotifMatchRegionMatchBeginPositionMF_02247327 ; faldo:reference ?thisSequence . ?targetMotifSequenceAlignmentOperationMF_02247335 edam:has_input signature:MF_02247 ; rdf:type edam:operation_0300 . BIND(STRLEN(REPLACE(SUBSTR(?templateMotifCigarE5XP76MF_02247324, 1, (STRLEN(?templateMotifCigarE5XP76MF_02247324) - STRLEN(REPLACE(?templateMotifCigarE5XP76MF_02247324, CONCAT('^(?:-*[^-]){', STR(((838 - ?templateMotifSequenceMatchBeginPositionE5XP76325) + 1)), '}'), '')))), '[a-z]', '')) AS ?step1336) . BIND((STRLEN(SUBSTR(?targetMotifMatchCigarE5XP76MF_02247326, 1, (STRLEN(?targetMotifMatchCigarE5XP76MF_02247326) - STRLEN(REPLACE(?targetMotifMatchCigarE5XP76MF_02247326, CONCAT('^(?:[a-z]*(?:[A-Z]|-)){', STR(?step1336), '}'), ''))))) - STRLEN(REPLACE(SUBSTR(?targetMotifMatchCigarE5XP76MF_02247326, 1, (STRLEN(?targetMotifMatchCigarE5XP76MF_02247326) - STRLEN(REPLACE(?targetMotifMatchCigarE5XP76MF_02247326, CONCAT('^(?:[a-z]*(?:[A-Z]|-)){', STR(?step1336), '}'), '')))), '[^-]', ''))) AS ?step2337) . BIND(((?step2337 + ?targetMotifMatchRegionMatchBeginPositionMF_02247327) - 1) AS ?thisPositionOn98) . BIND(?thisPositionOn98 AS ?thisPositionOn99) . BIND(?this AS ?pfs1t338) . BIND(URI(CONCAT(STR(?thisSequence), '#position', STR(?thisPositionOn98))) AS ?pfsb95) . BIND(URI(CONCAT(STR(?thisSequence), '#position', STR(?thisPositionOn99))) AS ?pfse96) . FILTER ((SUBSTR(?thisSequenceValue, ?thisPositionOn98, 1) = 'R')) . BIND(URI(CONCAT(STR(?this), '#MF_02247a94')) AS ?annotation94) . BIND(?this AS ?pfs93) . } OPTIONAL { ?this up:sequence ?thisSequence . ?thisSequence rdf:value ?thisSequenceValue . ?templateMotifMatch343 faldo:location ?templateMotifSequenceMatchRegionE5XP76344 ; edam:is_output_of ?templateMotifSequenceProfileAlignmentOperationE5XP76346 ; rdf:type edam:data_0869 ; rdf:value ?templateMotifCigarE5XP76MF_02247339 . ?templateMotifSequenceMatchRegionE5XP76344 faldo:begin ?templateMotifSequenceMatchBeginE5XP76345 . ?templateMotifSequenceMatchBeginE5XP76345 faldo:position ?templateMotifSequenceMatchBeginPositionE5XP76340 ; faldo:reference isoform:E5XP76-1 . ?templateMotifSequenceProfileAlignmentOperationE5XP76346 edam:has_input signature:MF_02247 ; rdf:type edam:operation_0300 . ?targetMotifMatch347 faldo:location ?targetMotifMatchRegionMatch348 ; edam:is_output_of ?targetMotifSequenceAlignmentOperationMF_02247350 ; rdf:type edam:data_0869 ; rdf:value ?targetMotifMatchCigarE5XP76MF_02247341 . ?targetMotifMatchRegionMatch348 faldo:begin ?targetMotifMatchRegionMatchBeginMF_02247349 . ?targetMotifMatchRegionMatchBeginMF_02247349 faldo:position ?targetMotifMatchRegionMatchBeginPositionMF_02247342 ; faldo:reference ?thisSequence . ?targetMotifSequenceAlignmentOperationMF_02247350 edam:has_input signature:MF_02247 ; rdf:type edam:operation_0300 . BIND(STRLEN(REPLACE(SUBSTR(?templateMotifCigarE5XP76MF_02247339, 1, (STRLEN(?templateMotifCigarE5XP76MF_02247339) - STRLEN(REPLACE(?templateMotifCigarE5XP76MF_02247339, CONCAT('^(?:-*[^-]){', STR(((934 - ?templateMotifSequenceMatchBeginPositionE5XP76340) + 1)), '}'), '')))), '[a-z]', '')) AS ?step1351) . BIND((STRLEN(SUBSTR(?targetMotifMatchCigarE5XP76MF_02247341, 1, (STRLEN(?targetMotifMatchCigarE5XP76MF_02247341) - STRLEN(REPLACE(?targetMotifMatchCigarE5XP76MF_02247341, CONCAT('^(?:[a-z]*(?:[A-Z]|-)){', STR(?step1351), '}'), ''))))) - STRLEN(REPLACE(SUBSTR(?targetMotifMatchCigarE5XP76MF_02247341, 1, (STRLEN(?targetMotifMatchCigarE5XP76MF_02247341) - STRLEN(REPLACE(?targetMotifMatchCigarE5XP76MF_02247341, CONCAT('^(?:[a-z]*(?:[A-Z]|-)){', STR(?step1351), '}'), '')))), '[^-]', ''))) AS ?step2352) . BIND(((?step2352 + ?targetMotifMatchRegionMatchBeginPositionMF_02247342) - 1) AS ?thisPositionOn105) . BIND(?thisPositionOn105 AS ?thisPositionOn106) . BIND(?this AS ?pfs1t353) . BIND(URI(CONCAT(STR(?thisSequence), '#position', STR(?thisPositionOn105))) AS ?pfsb102) . BIND(URI(CONCAT(STR(?thisSequence), '#position', STR(?thisPositionOn106))) AS ?pfse103) . FILTER ((SUBSTR(?thisSequenceValue, ?thisPositionOn105, 1) = 'S')) . BIND(URI(CONCAT(STR(?this), '#MF_02247a101')) AS ?annotation101) . BIND(?this AS ?pfs100) . } OPTIONAL { ?this up:sequence ?thisSequence . ?thisSequence rdf:value ?thisSequenceValue . ?templateMotifMatch358 faldo:location ?templateMotifSequenceMatchRegionE5XP76359 ; edam:is_output_of ?templateMotifSequenceProfileAlignmentOperationE5XP76361 ; rdf:type edam:data_0869 ; rdf:value ?templateMotifCigarE5XP76MF_02247354 . ?templateMotifSequenceMatchRegionE5XP76359 faldo:begin ?templateMotifSequenceMatchBeginE5XP76360 . ?templateMotifSequenceMatchBeginE5XP76360 faldo:position ?templateMotifSequenceMatchBeginPositionE5XP76355 ; faldo:reference isoform:E5XP76-1 . ?templateMotifSequenceProfileAlignmentOperationE5XP76361 edam:has_input signature:MF_02247 ; rdf:type edam:operation_0300 . ?targetMotifMatch362 faldo:location ?targetMotifMatchRegionMatch363 ; edam:is_output_of ?targetMotifSequenceAlignmentOperationMF_02247365 ; rdf:type edam:data_0869 ; rdf:value ?targetMotifMatchCigarE5XP76MF_02247356 . ?targetMotifMatchRegionMatch363 faldo:begin ?targetMotifMatchRegionMatchBeginMF_02247364 . ?targetMotifMatchRegionMatchBeginMF_02247364 faldo:position ?targetMotifMatchRegionMatchBeginPositionMF_02247357 ; faldo:reference ?thisSequence . ?targetMotifSequenceAlignmentOperationMF_02247365 edam:has_input signature:MF_02247 ; rdf:type edam:operation_0300 . BIND(STRLEN(REPLACE(SUBSTR(?templateMotifCigarE5XP76MF_02247354, 1, (STRLEN(?templateMotifCigarE5XP76MF_02247354) - STRLEN(REPLACE(?templateMotifCigarE5XP76MF_02247354, CONCAT('^(?:-*[^-]){', STR(((970 - ?templateMotifSequenceMatchBeginPositionE5XP76355) + 1)), '}'), '')))), '[a-z]', '')) AS ?step1366) . BIND((STRLEN(SUBSTR(?targetMotifMatchCigarE5XP76MF_02247356, 1, (STRLEN(?targetMotifMatchCigarE5XP76MF_02247356) - STRLEN(REPLACE(?targetMotifMatchCigarE5XP76MF_02247356, CONCAT('^(?:[a-z]*(?:[A-Z]|-)){', STR(?step1366), '}'), ''))))) - STRLEN(REPLACE(SUBSTR(?targetMotifMatchCigarE5XP76MF_02247356, 1, (STRLEN(?targetMotifMatchCigarE5XP76MF_02247356) - STRLEN(REPLACE(?targetMotifMatchCigarE5XP76MF_02247356, CONCAT('^(?:[a-z]*(?:[A-Z]|-)){', STR(?step1366), '}'), '')))), '[^-]', ''))) AS ?step2367) . BIND(((?step2367 + ?targetMotifMatchRegionMatchBeginPositionMF_02247357) - 1) AS ?thisPositionOn112) . BIND(?thisPositionOn112 AS ?thisPositionOn113) . BIND(?this AS ?pfs1t368) . BIND(URI(CONCAT(STR(?thisSequence), '#position', STR(?thisPositionOn112))) AS ?pfsb109) . BIND(URI(CONCAT(STR(?thisSequence), '#position', STR(?thisPositionOn113))) AS ?pfse110) . FILTER ((SUBSTR(?thisSequenceValue, ?thisPositionOn112, 1) = 'Y')) . BIND(URI(CONCAT(STR(?this), '#MF_02247a108')) AS ?annotation108) . BIND(?this AS ?pfs107) . } OPTIONAL { ?this up:sequence ?thisSequence . ?thisSequence rdf:value ?thisSequenceValue . ?templateMotifMatch373 faldo:location ?templateMotifSequenceMatchRegionE5XP76374 ; edam:is_output_of ?templateMotifSequenceProfileAlignmentOperationE5XP76376 ; rdf:type edam:data_0869 ; rdf:value ?templateMotifCigarE5XP76MF_02247369 . ?templateMotifSequenceMatchRegionE5XP76374 faldo:begin ?templateMotifSequenceMatchBeginE5XP76375 . ?templateMotifSequenceMatchBeginE5XP76375 faldo:position ?templateMotifSequenceMatchBeginPositionE5XP76370 ; faldo:reference isoform:E5XP76-1 . ?templateMotifSequenceProfileAlignmentOperationE5XP76376 edam:has_input signature:MF_02247 ; rdf:type edam:operation_0300 . ?targetMotifMatch377 faldo:location ?targetMotifMatchRegionMatch378 ; edam:is_output_of ?targetMotifSequenceAlignmentOperationMF_02247380 ; rdf:type edam:data_0869 ; rdf:value ?targetMotifMatchCigarE5XP76MF_02247371 . ?targetMotifMatchRegionMatch378 faldo:begin ?targetMotifMatchRegionMatchBeginMF_02247379 . ?targetMotifMatchRegionMatchBeginMF_02247379 faldo:position ?targetMotifMatchRegionMatchBeginPositionMF_02247372 ; faldo:reference ?thisSequence . ?targetMotifSequenceAlignmentOperationMF_02247380 edam:has_input signature:MF_02247 ; rdf:type edam:operation_0300 . BIND(STRLEN(REPLACE(SUBSTR(?templateMotifCigarE5XP76MF_02247369, 1, (STRLEN(?templateMotifCigarE5XP76MF_02247369) - STRLEN(REPLACE(?templateMotifCigarE5XP76MF_02247369, CONCAT('^(?:-*[^-]){', STR(((974 - ?templateMotifSequenceMatchBeginPositionE5XP76370) + 1)), '}'), '')))), '[a-z]', '')) AS ?step1381) . BIND((STRLEN(SUBSTR(?targetMotifMatchCigarE5XP76MF_02247371, 1, (STRLEN(?targetMotifMatchCigarE5XP76MF_02247371) - STRLEN(REPLACE(?targetMotifMatchCigarE5XP76MF_02247371, CONCAT('^(?:[a-z]*(?:[A-Z]|-)){', STR(?step1381), '}'), ''))))) - STRLEN(REPLACE(SUBSTR(?targetMotifMatchCigarE5XP76MF_02247371, 1, (STRLEN(?targetMotifMatchCigarE5XP76MF_02247371) - STRLEN(REPLACE(?targetMotifMatchCigarE5XP76MF_02247371, CONCAT('^(?:[a-z]*(?:[A-Z]|-)){', STR(?step1381), '}'), '')))), '[^-]', ''))) AS ?step2382) . BIND(((?step2382 + ?targetMotifMatchRegionMatchBeginPositionMF_02247372) - 1) AS ?thisPositionOn119) . BIND(?thisPositionOn119 AS ?thisPositionOn120) . BIND(?this AS ?pfs1t383) . BIND(URI(CONCAT(STR(?thisSequence), '#position', STR(?thisPositionOn119))) AS ?pfsb116) . BIND(URI(CONCAT(STR(?thisSequence), '#position', STR(?thisPositionOn120))) AS ?pfse117) . FILTER ((SUBSTR(?thisSequenceValue, ?thisPositionOn119, 1) = 'K')) . BIND(URI(CONCAT(STR(?this), '#MF_02247a115')) AS ?annotation115) . BIND(?this AS ?pfs114) . } OPTIONAL { ?this up:sequence ?thisSequence . ?thisSequence rdf:value ?thisSequenceValue . ?templateMotifMatch388 faldo:location ?templateMotifSequenceMatchRegionE5XP76389 ; edam:is_output_of ?templateMotifSequenceProfileAlignmentOperationE5XP76391 ; rdf:type edam:data_0869 ; rdf:value ?templateMotifCigarE5XP76MF_02247384 . ?templateMotifSequenceMatchRegionE5XP76389 faldo:begin ?templateMotifSequenceMatchBeginE5XP76390 . ?templateMotifSequenceMatchBeginE5XP76390 faldo:position ?templateMotifSequenceMatchBeginPositionE5XP76385 ; faldo:reference isoform:E5XP76-1 . ?templateMotifSequenceProfileAlignmentOperationE5XP76391 edam:has_input signature:MF_02247 ; rdf:type edam:operation_0300 . ?targetMotifMatch392 faldo:location ?targetMotifMatchRegionMatch393 ; edam:is_output_of ?targetMotifSequenceAlignmentOperationMF_02247395 ; rdf:type edam:data_0869 ; rdf:value ?targetMotifMatchCigarE5XP76MF_02247386 . ?targetMotifMatchRegionMatch393 faldo:begin ?targetMotifMatchRegionMatchBeginMF_02247394 . ?targetMotifMatchRegionMatchBeginMF_02247394 faldo:position ?targetMotifMatchRegionMatchBeginPositionMF_02247387 ; faldo:reference ?thisSequence . ?targetMotifSequenceAlignmentOperationMF_02247395 edam:has_input signature:MF_02247 ; rdf:type edam:operation_0300 . BIND(STRLEN(REPLACE(SUBSTR(?templateMotifCigarE5XP76MF_02247384, 1, (STRLEN(?templateMotifCigarE5XP76MF_02247384) - STRLEN(REPLACE(?templateMotifCigarE5XP76MF_02247384, CONCAT('^(?:-*[^-]){', STR(((997 - ?templateMotifSequenceMatchBeginPositionE5XP76385) + 1)), '}'), '')))), '[a-z]', '')) AS ?step1396) . BIND((STRLEN(SUBSTR(?targetMotifMatchCigarE5XP76MF_02247386, 1, (STRLEN(?targetMotifMatchCigarE5XP76MF_02247386) - STRLEN(REPLACE(?targetMotifMatchCigarE5XP76MF_02247386, CONCAT('^(?:[a-z]*(?:[A-Z]|-)){', STR(?step1396), '}'), ''))))) - STRLEN(REPLACE(SUBSTR(?targetMotifMatchCigarE5XP76MF_02247386, 1, (STRLEN(?targetMotifMatchCigarE5XP76MF_02247386) - STRLEN(REPLACE(?targetMotifMatchCigarE5XP76MF_02247386, CONCAT('^(?:[a-z]*(?:[A-Z]|-)){', STR(?step1396), '}'), '')))), '[^-]', ''))) AS ?step2397) . BIND(((?step2397 + ?targetMotifMatchRegionMatchBeginPositionMF_02247387) - 1) AS ?thisPositionOn126) . BIND(?thisPositionOn126 AS ?thisPositionOn127) . BIND(?this AS ?pfs1t398) . BIND(URI(CONCAT(STR(?thisSequence), '#position', STR(?thisPositionOn126))) AS ?pfsb123) . BIND(URI(CONCAT(STR(?thisSequence), '#position', STR(?thisPositionOn127))) AS ?pfse124) . FILTER ((SUBSTR(?thisSequenceValue, ?thisPositionOn126, 1) = 'S')) . BIND(URI(CONCAT(STR(?this), '#MF_02247a122')) AS ?annotation122) . BIND(?this AS ?pfs121) . } OPTIONAL { ?this up:sequence ?thisSequence . ?thisSequence rdf:value ?thisSequenceValue . ?templateMotifMatch403 faldo:location ?templateMotifSequenceMatchRegionE5XP76404 ; edam:is_output_of ?templateMotifSequenceProfileAlignmentOperationE5XP76406 ; rdf:type edam:data_0869 ; rdf:value ?templateMotifCigarE5XP76MF_02247399 . ?templateMotifSequenceMatchRegionE5XP76404 faldo:begin ?templateMotifSequenceMatchBeginE5XP76405 . ?templateMotifSequenceMatchBeginE5XP76405 faldo:position ?templateMotifSequenceMatchBeginPositionE5XP76400 ; faldo:reference isoform:E5XP76-1 . ?templateMotifSequenceProfileAlignmentOperationE5XP76406 edam:has_input signature:MF_02247 ; rdf:type edam:operation_0300 . ?targetMotifMatch407 faldo:location ?targetMotifMatchRegionMatch408 ; edam:is_output_of ?targetMotifSequenceAlignmentOperationMF_02247410 ; rdf:type edam:data_0869 ; rdf:value ?targetMotifMatchCigarE5XP76MF_02247401 . ?targetMotifMatchRegionMatch408 faldo:begin ?targetMotifMatchRegionMatchBeginMF_02247409 . ?targetMotifMatchRegionMatchBeginMF_02247409 faldo:position ?targetMotifMatchRegionMatchBeginPositionMF_02247402 ; faldo:reference ?thisSequence . ?targetMotifSequenceAlignmentOperationMF_02247410 edam:has_input signature:MF_02247 ; rdf:type edam:operation_0300 . BIND(STRLEN(REPLACE(SUBSTR(?templateMotifCigarE5XP76MF_02247399, 1, (STRLEN(?templateMotifCigarE5XP76MF_02247399) - STRLEN(REPLACE(?templateMotifCigarE5XP76MF_02247399, CONCAT('^(?:-*[^-]){', STR(((702 - ?templateMotifSequenceMatchBeginPositionE5XP76400) + 1)), '}'), '')))), '[a-z]', '')) AS ?step1411) . BIND((STRLEN(SUBSTR(?targetMotifMatchCigarE5XP76MF_02247401, 1, (STRLEN(?targetMotifMatchCigarE5XP76MF_02247401) - STRLEN(REPLACE(?targetMotifMatchCigarE5XP76MF_02247401, CONCAT('^(?:[a-z]*(?:[A-Z]|-)){', STR(?step1411), '}'), ''))))) - STRLEN(REPLACE(SUBSTR(?targetMotifMatchCigarE5XP76MF_02247401, 1, (STRLEN(?targetMotifMatchCigarE5XP76MF_02247401) - STRLEN(REPLACE(?targetMotifMatchCigarE5XP76MF_02247401, CONCAT('^(?:[a-z]*(?:[A-Z]|-)){', STR(?step1411), '}'), '')))), '[^-]', ''))) AS ?step2412) . BIND(((?step2412 + ?targetMotifMatchRegionMatchBeginPositionMF_02247402) - 1) AS ?thisPositionOn132) . BIND(?thisPositionOn132 AS ?thisPositionOn133) . BIND(?this AS ?pfs1t413) . BIND(URI(CONCAT(STR(?thisSequence), '#position', STR(?thisPositionOn132))) AS ?pfsb130) . BIND(URI(CONCAT(STR(?thisSequence), '#position', STR(?thisPositionOn133))) AS ?pfse131) . FILTER ((SUBSTR(?thisSequenceValue, ?thisPositionOn132, 1) = 'S')) . BIND(URI(CONCAT(STR(?this), '#MF_02247a129')) AS ?annotation129) . BIND(?this AS ?pfs128) . } }