CONSTRUCT { _:840965 up:source unirule:MF_03143 . _:840966 up:ecName '4.2.3.4' ; up:fullName '3-dehydroquinate synthase' ; up:shortName 'DHQS' ; rdf:type up:Structured_Name . _:840967 up:source unirule:MF_03143 . _:840968 up:ecName '2.5.1.19' ; up:fullName '3-phosphoshikimate 1-carboxyvinyltransferase' ; rdf:type up:Structured_Name . _:840969 up:fullName '5-enolpyruvylshikimate-3-phosphate synthase' ; up:shortName 'EPSP synthase' , 'EPSPS' ; rdf:type up:Structured_Name . _:840970 up:source unirule:MF_03143 . _:840971 up:ecName '2.7.1.71' ; up:fullName 'Shikimate kinase' ; up:shortName 'SK' ; rdf:type up:Structured_Name . _:840972 up:source unirule:MF_03143 . _:840973 up:ecName '4.2.1.10' ; up:fullName '3-dehydroquinate dehydratase' ; up:shortName '3-dehydroquinase' ; rdf:type up:Structured_Name . _:840974 up:source unirule:MF_03143 . _:840975 up:ecName '1.1.1.25' ; up:fullName 'Shikimate dehydrogenase' ; rdf:type up:Structured_Name . _:840976 up:source unirule:MF_03143 . _:840977 up:source unirule:MF_03143 . _:840978 up:source unirule:MF_03143 . _:840979 up:source unirule:MF_03143 . _:840980 up:source unirule:MF_03143 . _:840981 up:source unirule:MF_03143 . _:840982 up:source unirule:MF_03143 . _:840983 up:source unirule:MF_03143 . _:840984 up:source unirule:MF_03143 . _:840985 up:source unirule:MF_03143 . _:840986 up:source unirule:MF_03143 . _:840987 up:source unirule:MF_03143 . _:840988 up:source unirule:MF_03143 . _:840989 up:source unirule:MF_03143 . _:840990 up:source unirule:MF_03143 . _:840991 up:source unirule:MF_03143 . _:840992 up:source unirule:MF_03143 . _:840993 up:source unirule:MF_03143 . _:840994 up:source unirule:MF_03143 . _:840995 up:source unirule:MF_03143 . _:840996 up:source unirule:MF_03143 . _:840997 up:source unirule:MF_03143 . _:840998 up:source unirule:MF_03143 . _:840999 up:source unirule:MF_03143 . _:841000 up:source unirule:MF_03143 . _:841001 up:source unirule:MF_03143 . _:841002 up:source unirule:MF_03143 . _:841003 up:source unirule:MF_03143 . _:841004 up:source unirule:MF_03143 . _:841005 up:source unirule:MF_03143 . _:841006 up:source unirule:MF_03143 . _:841007 up:source unirule:MF_03143 . _:841008 up:source unirule:MF_03143 . _:841009 up:source unirule:MF_03143 . _:841010 up:source unirule:MF_03143 . _:841011 up:source unirule:MF_03143 . _:841012 up:source unirule:MF_03143 . _:841013 up:source unirule:MF_03143 . _:841014 up:source unirule:MF_03143 . _:841015 up:source unirule:MF_03143 . _:841016 up:source unirule:MF_03143 . _:841017 up:source unirule:MF_03143 . _:841018 up:source unirule:MF_03143 . _:841019 up:source unirule:MF_03143 . _:841020 up:source unirule:MF_03143 . _:841021 up:source unirule:MF_03143 . _:841022 up:source unirule:MF_03143 . _:841023 up:source unirule:MF_03143 . _:841024 up:source unirule:MF_03143 . _:841025 up:source unirule:MF_03143 . _:841026 up:source unirule:MF_03143 . _:841027 up:source unirule:MF_03143 . _:841028 up:source unirule:MF_03143 . _:841029 up:source unirule:MF_03143 . _:841030 up:source unirule:MF_03143 . _:841031 up:source unirule:MF_03143 . _:841032 up:source unirule:MF_03143 . _:841033 up:source unirule:MF_03143 . _:841034 up:source unirule:MF_03143 . _:841035 up:source unirule:MF_03143 . _:841036 up:source unirule:MF_03143 . _:841037 up:source unirule:MF_03143 . _:841038 up:source unirule:MF_03143 . _:841039 up:source unirule:MF_03143 . _:841040 up:source unirule:MF_03143 . _:841041 up:source unirule:MF_03143 . _:841042 up:source unirule:MF_03143 . _:841043 up:source unirule:MF_03143 . _:841044 up:source unirule:MF_03143 . _:841045 up:source unirule:MF_03143 . _:841046 up:source unirule:MF_03143 . _:841047 up:source unirule:MF_03143 . _:841048 up:source unirule:MF_03143 . _:841049 up:source unirule:MF_03143 . _:841050 up:source unirule:MF_03143 . ?this up:annotation ?annotation6 , ?annotation7 , ?annotation9 , ?annotation11 , ?annotation13 , ?annotation15 , ?annotation17 , ?annotation18 , ?annotation19 , ?annotation20 , ?annotation21 , ?annotation22 , ?annotation23 , ?annotation24 , ?annotation26 , ?annotation27 , ?annotation28 , ?annotation29 , ?annotation30 ; up:classifiedWith GO:0003855 , GO:0003856 , GO:0003866 , GO:0004764 , GO:0004765 , GO:0005524 , GO:0005737 , GO:0009073 , GO:0009423 , GO:0046872 , keyword:28 , keyword:418 , keyword:456 , keyword:479 , keyword:511 , keyword:521 , keyword:547 , keyword:560 , keyword:57 , keyword:67 , keyword:808 , keyword:862 , keyword:963 ; up:domain ?namedpart1 , ?namedpart2 , ?namedpart3 , ?namedpart4 , ?namedpart5 ; up:recommendedName ?name0 . ?name0 up:fullName 'Pentafunctional AROM polypeptide' ; rdf:type up:Structured_Name . ?namedpart1 up:recommendedName _:840966 . ?namedpart2 up:alternativeName _:840969 ; up:recommendedName _:840968 . ?namedpart3 up:recommendedName _:840971 . ?namedpart4 up:recommendedName _:840973 . ?namedpart5 up:recommendedName _:840975 . ?annotation6 a up:Function_Annotation ; rdfs:comment 'The AROM polypeptide catalyzes 5 consecutive enzymatic reactions in prechorismate polyaromatic amino acid biosynthesis.' . ?annotation7 up:activity ?activity8 ; rdf:type up:Catalytic_Activity_Annotation . ?activity8 up:catalyticActivity <http://rdf.rhea-db.org/21968>; up:enzymeClass <http://purl.uniprot.org/enzyme/4.2.3.4>. ?annotation9 up:activity ?activity10 ; rdf:type up:Catalytic_Activity_Annotation . ?activity10 up:catalyticActivity <http://rdf.rhea-db.org/21096>; up:enzymeClass <http://purl.uniprot.org/enzyme/4.2.1.10>. ?annotation11 up:activity ?activity12 ; rdf:type up:Catalytic_Activity_Annotation . ?activity12 up:catalyticActivity <http://rdf.rhea-db.org/17737>; up:enzymeClass <http://purl.uniprot.org/enzyme/1.1.1.25>. ?annotation13 up:activity ?activity14 ; rdf:type up:Catalytic_Activity_Annotation . ?activity14 up:catalyticActivity <http://rdf.rhea-db.org/13121>; up:enzymeClass <http://purl.uniprot.org/enzyme/2.7.1.71>. ?annotation15 up:activity ?activity16 ; rdf:type up:Catalytic_Activity_Annotation . ?activity16 up:catalyticActivity <http://rdf.rhea-db.org/21256>; up:enzymeClass <http://purl.uniprot.org/enzyme/2.5.1.19>. ?annotation17 up:cofactor chebi:29105 ; rdf:type up:Cofactor_Annotation ; rdfs:comment 'Binds 2 Zn(2+) ions per subunit.' . ?annotation18 a up:Pathway_Annotation ; rdfs:comment 'Metabolic intermediate biosynthesis; chorismate biosynthesis; chorismate from D-erythrose 4-phosphate and phosphoenolpyruvate: step 2/7.' . ?annotation19 a up:Pathway_Annotation ; rdfs:comment 'Metabolic intermediate biosynthesis; chorismate biosynthesis; chorismate from D-erythrose 4-phosphate and phosphoenolpyruvate: step 3/7.' . ?annotation20 a up:Pathway_Annotation ; rdfs:comment 'Metabolic intermediate biosynthesis; chorismate biosynthesis; chorismate from D-erythrose 4-phosphate and phosphoenolpyruvate: step 4/7.' . ?annotation21 a up:Pathway_Annotation ; rdfs:comment 'Metabolic intermediate biosynthesis; chorismate biosynthesis; chorismate from D-erythrose 4-phosphate and phosphoenolpyruvate: step 5/7.' . ?annotation22 a up:Pathway_Annotation ; rdfs:comment 'Metabolic intermediate biosynthesis; chorismate biosynthesis; chorismate from D-erythrose 4-phosphate and phosphoenolpyruvate: step 6/7.' . ?annotation23 a up:Subunit_Annotation ; rdfs:comment 'Homodimer.' . ?annotation24 a up:Subcellular_Location_Annotation . ?annotation24li25 up:cellularComponent <http://purl.uniprot.org/locations/null>. ?annotation26 a up:Similarity_Annotation ; rdfs:comment 'In the N-terminal section; belongs to the sugar phosphate cyclases superfamily. Dehydroquinate synthase family.' . ?annotation27 a up:Similarity_Annotation ; rdfs:comment 'In the 2nd section; belongs to the EPSP synthase family.' . ?annotation28 a up:Similarity_Annotation ; rdfs:comment 'In the 3rd section; belongs to the shikimate kinase family.' . ?annotation29 a up:Similarity_Annotation ; rdfs:comment 'In the 4th section; belongs to the type-I 3-dehydroquinase family.' . ?annotation30 a up:Similarity_Annotation ; rdfs:comment 'In the C-terminal section; belongs to the shikimate dehydrogenase family.' . ?pfs35 up:annotation ?annotation36 . ?annotation36 faldo:begin ?pfsb37 ; faldo:end ?pfse38 ; rdf:type up:Region_Annotation ; rdfs:comment '3-dehydroquinate synthase' . ?pfsb37 faldo:position ?thisPositionOn39 ; rdf:type faldo:ExactPosition . ?pfse38 faldo:position ?thisPositionOn40 ; rdf:type faldo:ExactPosition . ?pfs41 up:annotation ?annotation42 . ?annotation42 faldo:begin ?pfsb43 ; faldo:end ?pfse44 ; rdf:type up:Region_Annotation ; rdfs:comment 'EPSP synthase' . ?pfsb43 faldo:position ?thisPositionOn45 ; rdf:type faldo:ExactPosition . ?pfse44 faldo:position ?thisPositionOn46 ; rdf:type faldo:ExactPosition . ?pfs47 up:annotation ?annotation48 . ?annotation48 faldo:begin ?pfsb49 ; faldo:end ?pfse50 ; rdf:type up:Region_Annotation ; rdfs:comment 'Shikimate kinase' . ?pfsb49 faldo:position ?thisPositionOn51 ; rdf:type faldo:ExactPosition . ?pfse50 faldo:position ?thisPositionOn52 ; rdf:type faldo:ExactPosition . ?pfs53 up:annotation ?annotation54 . ?annotation54 faldo:begin ?pfsb55 ; faldo:end ?pfse56 ; rdf:type up:Region_Annotation ; rdfs:comment '3-dehydroquinase' . ?pfsb55 faldo:position ?thisPositionOn57 ; rdf:type faldo:ExactPosition . ?pfse56 faldo:position ?thisPositionOn58 ; rdf:type faldo:ExactPosition . ?pfs59 up:annotation ?annotation60 . ?annotation60 faldo:begin ?pfsb61 ; faldo:end ?pfse62 ; rdf:type up:Region_Annotation ; rdfs:comment 'Shikimate dehydrogenase' . ?pfsb61 faldo:position ?thisPositionOn63 ; rdf:type faldo:ExactPosition . ?pfse62 faldo:position ?thisPositionOn64 ; rdf:type faldo:ExactPosition . ?pfs65 up:annotation ?annotation66 . ?annotation66 faldo:begin ?pfsb67 ; faldo:end ?pfse68 ; up:ligand ?ligand69 ; rdf:type up:Binding_Site_Annotation . ?pfsb67 faldo:position ?thisPositionOn70 ; rdf:type faldo:ExactPosition . ?pfse68 faldo:position ?thisPositionOn71 ; rdf:type faldo:ExactPosition . ?ligand69 rdfs:subClassOf chebi:57540 . ?pfs72 up:annotation ?annotation73 . ?annotation73 faldo:begin ?pfsb74 ; faldo:end ?pfse75 ; up:ligand ?ligand76 ; rdf:type up:Binding_Site_Annotation . ?pfsb74 faldo:position ?thisPositionOn77 ; rdf:type faldo:ExactPosition . ?pfse75 faldo:position ?thisPositionOn78 ; rdf:type faldo:ExactPosition . ?ligand76 rdfs:subClassOf chebi:57540 . ?pfs79 up:annotation ?annotation80 . ?annotation80 faldo:begin ?pfsb81 ; faldo:end ?pfse82 ; up:ligand ?ligand83 ; rdf:type up:Binding_Site_Annotation . ?pfsb81 faldo:position ?thisPositionOn84 ; rdf:type faldo:ExactPosition . ?pfse82 faldo:position ?thisPositionOn85 ; rdf:type faldo:ExactPosition . ?ligand83 rdfs:subClassOf chebi:57540 . ?pfs86 up:annotation ?annotation87 . ?annotation87 faldo:begin ?pfsb88 ; faldo:end ?pfse89 ; up:ligand ?ligand90 ; rdf:type up:Binding_Site_Annotation . ?pfsb88 faldo:position ?thisPositionOn91 ; rdf:type faldo:ExactPosition . ?pfse89 faldo:position ?thisPositionOn92 ; rdf:type faldo:ExactPosition . ?ligand90 rdfs:subClassOf chebi:57540 . ?pfs93 up:annotation ?annotation94 . ?annotation94 faldo:begin ?pfsb95 ; faldo:end ?pfse96 ; up:ligand ?ligand97 ; rdf:type up:Binding_Site_Annotation . ?pfsb95 faldo:position ?thisPositionOn98 ; rdf:type faldo:ExactPosition . ?pfse96 faldo:position ?thisPositionOn99 ; rdf:type faldo:ExactPosition . ?ligand97 rdfs:subClassOf chebi:57540 . ?pfs100 up:annotation ?annotation101 . ?annotation101 faldo:begin ?pfsb102 ; faldo:end ?pfse103 ; up:ligand ?ligand104 ; rdf:type up:Binding_Site_Annotation . ?pfsb102 faldo:position ?thisPositionOn105 ; rdf:type faldo:ExactPosition . ?pfse103 faldo:position ?thisPositionOn106 ; rdf:type faldo:ExactPosition . ?ligand104 rdfs:subClassOf chebi:30616 . ?pfs107 up:annotation ?annotation108 . ?annotation108 faldo:begin ?pfsb109 ; faldo:end ?pfse110 ; up:ligand ?ligand111 ; rdf:type up:Binding_Site_Annotation . ?pfsb109 faldo:position ?thisPositionOn112 ; rdf:type faldo:ExactPosition . ?pfse110 faldo:position ?thisPositionOn113 ; rdf:type faldo:ExactPosition . ?ligand111 rdfs:subClassOf chebi:58394 . ?pfs114 up:annotation ?annotation115 . ?annotation115 faldo:begin ?pfsb116 ; faldo:end ?pfse117 ; up:ligand ?ligand118 ; rdf:type up:Binding_Site_Annotation . ?pfsb116 faldo:position ?thisPositionOn119 ; rdf:type faldo:ExactPosition . ?pfse117 faldo:position ?thisPositionOn120 ; rdf:type faldo:ExactPosition . ?ligand118 rdfs:subClassOf chebi:58394 . ?pfs121 up:annotation ?annotation122 . ?annotation122 faldo:begin ?pfsb123 ; faldo:end ?pfse124 ; rdf:type up:Active_Site_Annotation ; rdfs:comment 'Proton acceptor; for 3-dehydroquinate synthase activity' . ?pfsb123 faldo:position ?thisPositionOn125 ; rdf:type faldo:ExactPosition . ?pfse124 faldo:position ?thisPositionOn126 ; rdf:type faldo:ExactPosition . ?pfs127 up:annotation ?annotation128 . ?annotation128 faldo:begin ?pfsb129 ; faldo:end ?pfse130 ; rdf:type up:Active_Site_Annotation ; rdfs:comment 'Proton acceptor; for 3-dehydroquinate synthase activity' . ?pfsb129 faldo:position ?thisPositionOn131 ; rdf:type faldo:ExactPosition . ?pfse130 faldo:position ?thisPositionOn132 ; rdf:type faldo:ExactPosition . ?pfs133 up:annotation ?annotation134 . ?annotation134 faldo:begin ?pfsb135 ; faldo:end ?pfse136 ; rdf:type up:Active_Site_Annotation ; rdfs:comment 'For EPSP synthase activity' . ?pfsb135 faldo:position ?thisPositionOn137 ; rdf:type faldo:ExactPosition . ?pfse136 faldo:position ?thisPositionOn138 ; rdf:type faldo:ExactPosition . ?pfs139 up:annotation ?annotation140 . ?annotation140 faldo:begin ?pfsb141 ; faldo:end ?pfse142 ; rdf:type up:Active_Site_Annotation ; rdfs:comment 'Proton acceptor; for 3-dehydroquinate dehydratase activity' . ?pfsb141 faldo:position ?thisPositionOn143 ; rdf:type faldo:ExactPosition . ?pfse142 faldo:position ?thisPositionOn144 ; rdf:type faldo:ExactPosition . ?pfs145 up:annotation ?annotation146 . ?annotation146 faldo:begin ?pfsb147 ; faldo:end ?pfse148 ; rdf:type up:Active_Site_Annotation ; rdfs:comment 'Schiff-base intermediate with substrate; for 3-dehydroquinate dehydratase activity' . ?pfsb147 faldo:position ?thisPositionOn149 ; rdf:type faldo:ExactPosition . ?pfse148 faldo:position ?thisPositionOn150 ; rdf:type faldo:ExactPosition . ?pfs151 up:annotation ?annotation152 . ?annotation152 faldo:begin ?pfsb153 ; faldo:end ?pfse154 ; up:ligand ?ligand155 ; rdf:type up:Binding_Site_Annotation . ?pfsb153 faldo:position ?thisPositionOn156 ; rdf:type faldo:ExactPosition . ?pfse154 faldo:position ?thisPositionOn157 ; rdf:type faldo:ExactPosition . ?ligand155 rdfs:subClassOf chebi:29105 . ?pfs158 up:annotation ?annotation159 . ?annotation159 faldo:begin ?pfsb160 ; faldo:end ?pfse161 ; up:ligand ?ligand162 ; rdf:type up:Binding_Site_Annotation . ?pfsb160 faldo:position ?thisPositionOn163 ; rdf:type faldo:ExactPosition . ?pfse161 faldo:position ?thisPositionOn164 ; rdf:type faldo:ExactPosition . ?ligand162 rdfs:subClassOf chebi:29105 . ?pfs165 up:annotation ?annotation166 . ?annotation166 faldo:begin ?pfsb167 ; faldo:end ?pfse168 ; up:ligand ?ligand169 ; rdf:type up:Binding_Site_Annotation . ?pfsb167 faldo:position ?thisPositionOn170 ; rdf:type faldo:ExactPosition . ?pfse168 faldo:position ?thisPositionOn171 ; rdf:type faldo:ExactPosition . ?ligand169 rdfs:subClassOf chebi:29105 . ?pfs172 up:annotation ?annotation173 . ?annotation173 faldo:begin ?pfsb174 ; faldo:end ?pfse175 ; up:ligand ?ligand176 ; rdf:type up:Binding_Site_Annotation . ?pfsb174 faldo:position ?thisPositionOn177 ; rdf:type faldo:ExactPosition . ?pfse175 faldo:position ?thisPositionOn178 ; rdf:type faldo:ExactPosition . ?ligand176 rdfs:subClassOf chebi:57540 . ?pfs179 up:annotation ?annotation180 . ?annotation180 faldo:begin ?pfsb181 ; faldo:end ?pfse182 ; up:ligand ?ligand183 ; rdf:type up:Binding_Site_Annotation . ?pfsb181 faldo:position ?thisPositionOn184 ; rdf:type faldo:ExactPosition . ?pfse182 faldo:position ?thisPositionOn185 ; rdf:type faldo:ExactPosition . ?ligand183 rdfs:subClassOf chebi:58394 . ?pfs186 up:annotation ?annotation187 . ?annotation187 faldo:begin ?pfsb188 ; faldo:end ?pfse189 ; up:ligand ?ligand190 ; rdf:type up:Binding_Site_Annotation . ?pfsb188 faldo:position ?thisPositionOn191 ; rdf:type faldo:ExactPosition . ?pfse189 faldo:position ?thisPositionOn192 ; rdf:type faldo:ExactPosition . ?ligand190 rdfs:subClassOf chebi:58394 . ?pfs193 up:annotation ?annotation194 . ?annotation194 faldo:begin ?pfsb195 ; faldo:end ?pfse196 ; up:ligand ?ligand197 ; rdf:type up:Binding_Site_Annotation . ?pfsb195 faldo:position ?thisPositionOn198 ; rdf:type faldo:ExactPosition . ?pfse196 faldo:position ?thisPositionOn199 ; rdf:type faldo:ExactPosition . ?ligand197 rdfs:subClassOf chebi:58394 . ?pfs200 up:annotation ?annotation201 . ?annotation201 faldo:begin ?pfsb202 ; faldo:end ?pfse203 ; up:ligand ?ligand204 ; rdf:type up:Binding_Site_Annotation . ?pfsb202 faldo:position ?thisPositionOn205 ; rdf:type faldo:ExactPosition . ?pfse203 faldo:position ?thisPositionOn206 ; rdf:type faldo:ExactPosition . ?ligand204 rdfs:subClassOf chebi:57540 . ?pfs207 up:annotation ?annotation208 . ?annotation208 faldo:begin ?pfsb209 ; faldo:end ?pfse210 ; up:ligand ?ligand211 ; rdf:type up:Binding_Site_Annotation . ?pfsb209 faldo:position ?thisPositionOn212 ; rdf:type faldo:ExactPosition . ?pfse210 faldo:position ?thisPositionOn213 ; rdf:type faldo:ExactPosition . ?ligand211 rdfs:subClassOf chebi:58394 . ?pfs214 up:annotation ?annotation215 . ?annotation215 faldo:begin ?pfsb216 ; faldo:end ?pfse217 ; up:ligand ?ligand218 ; rdf:type up:Binding_Site_Annotation . ?pfsb216 faldo:position ?thisPositionOn219 ; rdf:type faldo:ExactPosition . ?pfse217 faldo:position ?thisPositionOn220 ; rdf:type faldo:ExactPosition . ?ligand218 rdfs:subClassOf chebi:57540 . ?pfs221 up:annotation ?annotation222 . ?annotation222 faldo:begin ?pfsb223 ; faldo:end ?pfse224 ; up:ligand ?ligand225 ; rdf:type up:Binding_Site_Annotation . ?pfsb223 faldo:position ?thisPositionOn226 ; rdf:type faldo:ExactPosition . ?pfse224 faldo:position ?thisPositionOn227 ; rdf:type faldo:ExactPosition . ?ligand225 rdfs:subClassOf chebi:58394 . ?pfs228 up:annotation ?annotation229 . ?annotation229 faldo:begin ?pfsb230 ; faldo:end ?pfse231 ; up:ligand ?ligand232 ; rdf:type up:Binding_Site_Annotation . ?pfsb230 faldo:position ?thisPositionOn233 ; rdf:type faldo:ExactPosition . ?pfse231 faldo:position ?thisPositionOn234 ; rdf:type faldo:ExactPosition . ?ligand232 rdfs:subClassOf chebi:58394 . ?pfs235 up:annotation ?annotation236 . ?annotation236 faldo:begin ?pfsb237 ; faldo:end ?pfse238 ; up:ligand ?ligand239 ; rdf:type up:Binding_Site_Annotation . ?pfsb237 faldo:position ?thisPositionOn240 ; rdf:type faldo:ExactPosition . ?pfse238 faldo:position ?thisPositionOn241 ; rdf:type faldo:ExactPosition . ?ligand239 rdfs:subClassOf chebi:58394 . ?pfs242 up:annotation ?annotation243 . ?annotation243 faldo:begin ?pfsb244 ; faldo:end ?pfse245 ; up:ligand ?ligand246 ; rdf:type up:Binding_Site_Annotation . ?pfsb244 faldo:position ?thisPositionOn247 ; rdf:type faldo:ExactPosition . ?pfse245 faldo:position ?thisPositionOn248 ; rdf:type faldo:ExactPosition . ?ligand246 rdfs:subClassOf chebi:58394 . _:841051 a rdf:Statement ; up:attribution _:840965 ; rdf:subject ?this ; rdf:predicate up:recommendedName ; rdf:object ?name0 . _:841052 a rdf:Statement ; up:attribution _:840967 ; rdf:subject ?this ; rdf:predicate up:domain ; rdf:object ?namedpart1 . _:841053 a rdf:Statement ; up:attribution _:840970 ; rdf:subject ?this ; rdf:predicate up:domain ; rdf:object ?namedpart2 . _:841054 a rdf:Statement ; up:attribution _:840972 ; rdf:subject ?this ; rdf:predicate up:domain ; rdf:object ?namedpart3 . _:841055 a rdf:Statement ; up:attribution _:840974 ; rdf:subject ?this ; rdf:predicate up:domain ; rdf:object ?namedpart4 . _:841056 a rdf:Statement ; up:attribution _:840976 ; rdf:subject ?this ; rdf:predicate up:domain ; rdf:object ?namedpart5 . _:841057 a rdf:Statement ; up:attribution _:840977 ; rdf:subject ?this ; rdf:predicate up:annotation ; rdf:object ?annotation6 . _:841058 a rdf:Statement ; up:attribution _:840978 ; rdf:subject ?this ; rdf:predicate up:annotation ; rdf:object ?annotation7 . _:841059 a rdf:Statement ; up:attribution _:840979 ; rdf:subject ?this ; rdf:predicate up:annotation ; rdf:object ?annotation9 . _:841060 a rdf:Statement ; up:attribution _:840980 ; rdf:subject ?this ; rdf:predicate up:annotation ; rdf:object ?annotation11 . _:841061 a rdf:Statement ; up:attribution _:840981 ; rdf:subject ?this ; rdf:predicate up:annotation ; rdf:object ?annotation13 . _:841062 a rdf:Statement ; up:attribution _:840982 ; rdf:subject ?this ; rdf:predicate up:annotation ; rdf:object ?annotation15 . _:841063 a rdf:Statement ; up:attribution _:840983 ; rdf:subject ?this ; rdf:predicate up:annotation ; rdf:object ?annotation17 . _:841064 a rdf:Statement ; up:attribution _:840984 ; rdf:subject ?this ; rdf:predicate up:annotation ; rdf:object ?annotation18 . _:841065 a rdf:Statement ; up:attribution _:840985 ; rdf:subject ?this ; rdf:predicate up:annotation ; rdf:object ?annotation19 . _:841066 a rdf:Statement ; up:attribution _:840986 ; rdf:subject ?this ; rdf:predicate up:annotation ; rdf:object ?annotation20 . _:841067 a rdf:Statement ; up:attribution _:840987 ; rdf:subject ?this ; rdf:predicate up:annotation ; rdf:object ?annotation21 . _:841068 a rdf:Statement ; up:attribution _:840988 ; rdf:subject ?this ; rdf:predicate up:annotation ; rdf:object ?annotation22 . _:841069 a rdf:Statement ; up:attribution _:840989 ; rdf:subject ?this ; rdf:predicate up:annotation ; rdf:object ?annotation23 . _:841070 a rdf:Statement ; up:attribution _:840990 ; rdf:subject ?this ; rdf:predicate up:annotation ; rdf:object ?annotation24 . _:841071 a rdf:Statement ; up:attribution _:840991 ; rdf:subject ?this ; rdf:predicate up:annotation ; rdf:object ?annotation26 . _:841072 a rdf:Statement ; up:attribution _:840992 ; rdf:subject ?this ; rdf:predicate up:annotation ; rdf:object ?annotation27 . _:841073 a rdf:Statement ; up:attribution _:840993 ; rdf:subject ?this ; rdf:predicate up:annotation ; rdf:object ?annotation28 . _:841074 a rdf:Statement ; up:attribution _:840994 ; rdf:subject ?this ; rdf:predicate up:annotation ; rdf:object ?annotation29 . _:841075 a rdf:Statement ; up:attribution _:840995 ; rdf:subject ?this ; rdf:predicate up:annotation ; rdf:object ?annotation30 . _:841076 a rdf:Statement ; up:attribution _:840996 ; rdf:subject ?this ; rdf:predicate up:classifiedWith ; rdf:object keyword:28 . _:841077 a rdf:Statement ; up:attribution _:840997 ; rdf:subject ?this ; rdf:predicate up:classifiedWith ; rdf:object keyword:57 . _:841078 a rdf:Statement ; up:attribution _:840998 ; rdf:subject ?this ; rdf:predicate up:classifiedWith ; rdf:object keyword:67 . _:841079 a rdf:Statement ; up:attribution _:840999 ; rdf:subject ?this ; rdf:predicate up:classifiedWith ; rdf:object keyword:963 . _:841080 a rdf:Statement ; up:attribution _:841000 ; rdf:subject ?this ; rdf:predicate up:classifiedWith ; rdf:object keyword:418 . _:841081 a rdf:Statement ; up:attribution _:841001 ; rdf:subject ?this ; rdf:predicate up:classifiedWith ; rdf:object keyword:456 . _:841082 a rdf:Statement ; up:attribution _:841002 ; rdf:subject ?this ; rdf:predicate up:classifiedWith ; rdf:object keyword:479 . _:841083 a rdf:Statement ; up:attribution _:841003 ; rdf:subject ?this ; rdf:predicate up:classifiedWith ; rdf:object keyword:511 . _:841084 a rdf:Statement ; up:attribution _:841004 ; rdf:subject ?this ; rdf:predicate up:classifiedWith ; rdf:object keyword:521 . _:841085 a rdf:Statement ; up:attribution _:841005 ; rdf:subject ?this ; rdf:predicate up:classifiedWith ; rdf:object keyword:547 . _:841086 a rdf:Statement ; up:attribution _:841006 ; rdf:subject ?this ; rdf:predicate up:classifiedWith ; rdf:object keyword:560 . _:841087 a rdf:Statement ; up:attribution _:841007 ; rdf:subject ?this ; rdf:predicate up:classifiedWith ; rdf:object keyword:808 . _:841088 a rdf:Statement ; up:attribution _:841008 ; rdf:subject ?this ; rdf:predicate up:classifiedWith ; rdf:object keyword:862 . _:841089 a rdf:Statement ; up:attribution _:841009 ; rdf:subject ?this ; rdf:predicate up:classifiedWith ; rdf:object GO:0005737 . _:841090 a rdf:Statement ; up:attribution _:841010 ; rdf:subject ?this ; rdf:predicate up:classifiedWith ; rdf:object GO:0003855 . _:841091 a rdf:Statement ; up:attribution _:841011 ; rdf:subject ?this ; rdf:predicate up:classifiedWith ; rdf:object GO:0003856 . _:841092 a rdf:Statement ; up:attribution _:841012 ; rdf:subject ?this ; rdf:predicate up:classifiedWith ; rdf:object GO:0003866 . _:841093 a rdf:Statement ; up:attribution _:841013 ; rdf:subject ?this ; rdf:predicate up:classifiedWith ; rdf:object GO:0005524 . _:841094 a rdf:Statement ; up:attribution _:841014 ; rdf:subject ?this ; rdf:predicate up:classifiedWith ; rdf:object GO:0046872 . _:841095 a rdf:Statement ; up:attribution _:841015 ; rdf:subject ?this ; rdf:predicate up:classifiedWith ; rdf:object GO:0004764 . _:841096 a rdf:Statement ; up:attribution _:841016 ; rdf:subject ?this ; rdf:predicate up:classifiedWith ; rdf:object GO:0004765 . _:841097 a rdf:Statement ; up:attribution _:841017 ; rdf:subject ?this ; rdf:predicate up:classifiedWith ; rdf:object GO:0009073 . _:841098 a rdf:Statement ; up:attribution _:841018 ; rdf:subject ?this ; rdf:predicate up:classifiedWith ; rdf:object GO:0009423 . _:841099 a rdf:Statement ; up:source unirule:MF_03143 ; rdf:subject ?pfs35 ; rdf:predicate up:annotation ; rdf:object ?annotation36 . _:841100 a rdf:Statement ; up:attribution _:841019 ; rdf:subject ?pfs35 ; rdf:predicate up:annotation ; rdf:object ?annotation36 . _:841101 a rdf:Statement ; up:source unirule:MF_03143 ; rdf:subject ?pfs41 ; rdf:predicate up:annotation ; rdf:object ?annotation42 . _:841102 a rdf:Statement ; up:attribution _:841020 ; rdf:subject ?pfs41 ; rdf:predicate up:annotation ; rdf:object ?annotation42 . _:841103 a rdf:Statement ; up:source unirule:MF_03143 ; rdf:subject ?pfs47 ; rdf:predicate up:annotation ; rdf:object ?annotation48 . _:841104 a rdf:Statement ; up:attribution _:841021 ; rdf:subject ?pfs47 ; rdf:predicate up:annotation ; rdf:object ?annotation48 . _:841105 a rdf:Statement ; up:source unirule:MF_03143 ; rdf:subject ?pfs53 ; rdf:predicate up:annotation ; rdf:object ?annotation54 . _:841106 a rdf:Statement ; up:attribution _:841022 ; rdf:subject ?pfs53 ; rdf:predicate up:annotation ; rdf:object ?annotation54 . _:841107 a rdf:Statement ; up:source unirule:MF_03143 ; rdf:subject ?pfs59 ; rdf:predicate up:annotation ; rdf:object ?annotation60 . _:841108 a rdf:Statement ; up:attribution _:841023 ; rdf:subject ?pfs59 ; rdf:predicate up:annotation ; rdf:object ?annotation60 . _:841109 a rdf:Statement ; up:source unirule:MF_03143 ; rdf:subject ?pfs65 ; rdf:predicate up:annotation ; rdf:object ?annotation66 . _:841110 a rdf:Statement ; up:attribution _:841024 ; rdf:subject ?pfs65 ; rdf:predicate up:annotation ; rdf:object ?annotation66 . _:841111 a rdf:Statement ; up:source unirule:MF_03143 ; rdf:subject ?pfs72 ; rdf:predicate up:annotation ; rdf:object ?annotation73 . _:841112 a rdf:Statement ; up:attribution _:841025 ; rdf:subject ?pfs72 ; rdf:predicate up:annotation ; rdf:object ?annotation73 . _:841113 a rdf:Statement ; up:source unirule:MF_03143 ; rdf:subject ?pfs79 ; rdf:predicate up:annotation ; rdf:object ?annotation80 . _:841114 a rdf:Statement ; up:attribution _:841026 ; rdf:subject ?pfs79 ; rdf:predicate up:annotation ; rdf:object ?annotation80 . _:841115 a rdf:Statement ; up:source unirule:MF_03143 ; rdf:subject ?pfs86 ; rdf:predicate up:annotation ; rdf:object ?annotation87 . _:841116 a rdf:Statement ; up:attribution _:841027 ; rdf:subject ?pfs86 ; rdf:predicate up:annotation ; rdf:object ?annotation87 . _:841117 a rdf:Statement ; up:source unirule:MF_03143 ; rdf:subject ?pfs93 ; rdf:predicate up:annotation ; rdf:object ?annotation94 . _:841118 a rdf:Statement ; up:attribution _:841028 ; rdf:subject ?pfs93 ; rdf:predicate up:annotation ; rdf:object ?annotation94 . _:841119 a rdf:Statement ; up:source unirule:MF_03143 ; rdf:subject ?pfs100 ; rdf:predicate up:annotation ; rdf:object ?annotation101 . _:841120 a rdf:Statement ; up:attribution _:841029 ; rdf:subject ?pfs100 ; rdf:predicate up:annotation ; rdf:object ?annotation101 . _:841121 a rdf:Statement ; up:source unirule:MF_03143 ; rdf:subject ?pfs107 ; rdf:predicate up:annotation ; rdf:object ?annotation108 . _:841122 a rdf:Statement ; up:attribution _:841030 ; rdf:subject ?pfs107 ; rdf:predicate up:annotation ; rdf:object ?annotation108 . _:841123 a rdf:Statement ; up:source unirule:MF_03143 ; rdf:subject ?pfs114 ; rdf:predicate up:annotation ; rdf:object ?annotation115 . _:841124 a rdf:Statement ; up:attribution _:841031 ; rdf:subject ?pfs114 ; rdf:predicate up:annotation ; rdf:object ?annotation115 . _:841125 a rdf:Statement ; up:source unirule:MF_03143 ; rdf:subject ?pfs121 ; rdf:predicate up:annotation ; rdf:object ?annotation122 . _:841126 a rdf:Statement ; up:attribution _:841032 ; rdf:subject ?pfs121 ; rdf:predicate up:annotation ; rdf:object ?annotation122 . _:841127 a rdf:Statement ; up:source unirule:MF_03143 ; rdf:subject ?pfs127 ; rdf:predicate up:annotation ; rdf:object ?annotation128 . _:841128 a rdf:Statement ; up:attribution _:841033 ; rdf:subject ?pfs127 ; rdf:predicate up:annotation ; rdf:object ?annotation128 . _:841129 a rdf:Statement ; up:source unirule:MF_03143 ; rdf:subject ?pfs133 ; rdf:predicate up:annotation ; rdf:object ?annotation134 . _:841130 a rdf:Statement ; up:attribution _:841034 ; rdf:subject ?pfs133 ; rdf:predicate up:annotation ; rdf:object ?annotation134 . _:841131 a rdf:Statement ; up:source unirule:MF_03143 ; rdf:subject ?pfs139 ; rdf:predicate up:annotation ; rdf:object ?annotation140 . _:841132 a rdf:Statement ; up:attribution _:841035 ; rdf:subject ?pfs139 ; rdf:predicate up:annotation ; rdf:object ?annotation140 . _:841133 a rdf:Statement ; up:source unirule:MF_03143 ; rdf:subject ?pfs145 ; rdf:predicate up:annotation ; rdf:object ?annotation146 . _:841134 a rdf:Statement ; up:attribution _:841036 ; rdf:subject ?pfs145 ; rdf:predicate up:annotation ; rdf:object ?annotation146 . _:841135 a rdf:Statement ; up:source unirule:MF_03143 ; rdf:subject ?pfs151 ; rdf:predicate up:annotation ; rdf:object ?annotation152 . _:841136 a rdf:Statement ; up:attribution _:841037 ; rdf:subject ?pfs151 ; rdf:predicate up:annotation ; rdf:object ?annotation152 . _:841137 a rdf:Statement ; up:source unirule:MF_03143 ; rdf:subject ?pfs158 ; rdf:predicate up:annotation ; rdf:object ?annotation159 . _:841138 a rdf:Statement ; up:attribution _:841038 ; rdf:subject ?pfs158 ; rdf:predicate up:annotation ; rdf:object ?annotation159 . _:841139 a rdf:Statement ; up:source unirule:MF_03143 ; rdf:subject ?pfs165 ; rdf:predicate up:annotation ; rdf:object ?annotation166 . _:841140 a rdf:Statement ; up:attribution _:841039 ; rdf:subject ?pfs165 ; rdf:predicate up:annotation ; rdf:object ?annotation166 . _:841141 a rdf:Statement ; up:source unirule:MF_03143 ; rdf:subject ?pfs172 ; rdf:predicate up:annotation ; rdf:object ?annotation173 . _:841142 a rdf:Statement ; up:attribution _:841040 ; rdf:subject ?pfs172 ; rdf:predicate up:annotation ; rdf:object ?annotation173 . _:841143 a rdf:Statement ; up:source unirule:MF_03143 ; rdf:subject ?pfs179 ; rdf:predicate up:annotation ; rdf:object ?annotation180 . _:841144 a rdf:Statement ; up:attribution _:841041 ; rdf:subject ?pfs179 ; rdf:predicate up:annotation ; rdf:object ?annotation180 . _:841145 a rdf:Statement ; up:source unirule:MF_03143 ; rdf:subject ?pfs186 ; rdf:predicate up:annotation ; rdf:object ?annotation187 . _:841146 a rdf:Statement ; up:attribution _:841042 ; rdf:subject ?pfs186 ; rdf:predicate up:annotation ; rdf:object ?annotation187 . _:841147 a rdf:Statement ; up:source unirule:MF_03143 ; rdf:subject ?pfs193 ; rdf:predicate up:annotation ; rdf:object ?annotation194 . _:841148 a rdf:Statement ; up:attribution _:841043 ; rdf:subject ?pfs193 ; rdf:predicate up:annotation ; rdf:object ?annotation194 . _:841149 a rdf:Statement ; up:source unirule:MF_03143 ; rdf:subject ?pfs200 ; rdf:predicate up:annotation ; rdf:object ?annotation201 . _:841150 a rdf:Statement ; up:attribution _:841044 ; rdf:subject ?pfs200 ; rdf:predicate up:annotation ; rdf:object ?annotation201 . _:841151 a rdf:Statement ; up:source unirule:MF_03143 ; rdf:subject ?pfs207 ; rdf:predicate up:annotation ; rdf:object ?annotation208 . _:841152 a rdf:Statement ; up:attribution _:841045 ; rdf:subject ?pfs207 ; rdf:predicate up:annotation ; rdf:object ?annotation208 . _:841153 a rdf:Statement ; up:source unirule:MF_03143 ; rdf:subject ?pfs214 ; rdf:predicate up:annotation ; rdf:object ?annotation215 . _:841154 a rdf:Statement ; up:attribution _:841046 ; rdf:subject ?pfs214 ; rdf:predicate up:annotation ; rdf:object ?annotation215 . _:841155 a rdf:Statement ; up:source unirule:MF_03143 ; rdf:subject ?pfs221 ; rdf:predicate up:annotation ; rdf:object ?annotation222 . _:841156 a rdf:Statement ; up:attribution _:841047 ; rdf:subject ?pfs221 ; rdf:predicate up:annotation ; rdf:object ?annotation222 . _:841157 a rdf:Statement ; up:source unirule:MF_03143 ; rdf:subject ?pfs228 ; rdf:predicate up:annotation ; rdf:object ?annotation229 . _:841158 a rdf:Statement ; up:attribution _:841048 ; rdf:subject ?pfs228 ; rdf:predicate up:annotation ; rdf:object ?annotation229 . _:841159 a rdf:Statement ; up:source unirule:MF_03143 ; rdf:subject ?pfs235 ; rdf:predicate up:annotation ; rdf:object ?annotation236 . _:841160 a rdf:Statement ; up:attribution _:841049 ; rdf:subject ?pfs235 ; rdf:predicate up:annotation ; rdf:object ?annotation236 . _:841161 a rdf:Statement ; up:source unirule:MF_03143 ; rdf:subject ?pfs242 ; rdf:predicate up:annotation ; rdf:object ?annotation243 . _:841162 a rdf:Statement ; up:attribution _:841050 ; rdf:subject ?pfs242 ; rdf:predicate up:annotation ; rdf:object ?annotation243 . } WHERE { #baseURI: http://purl.uniprot.org/unirule/MF_03143 #Rule MF_03143 Created by:? on:2012-11-01 Modified by:Edouard de Castro on:2024-09-03 ?this up:organism ?thisOrganism ; rdfs:seeAlso signature:MF_03143 . ?thisOrganism rdfs:subClassOf+ taxon:4751 . BIND(URI(CONCAT(STR(?this), '#MF_03143a0')) AS ?name0) . BIND(URI(CONCAT(STR(?this), '#MF_03143a1')) AS ?namedpart1) . BIND(URI(CONCAT(STR(?this), '#MF_03143a2')) AS ?namedpart2) . BIND(URI(CONCAT(STR(?this), '#MF_03143a3')) AS ?namedpart3) . BIND(URI(CONCAT(STR(?this), '#MF_03143a4')) AS ?namedpart4) . BIND(URI(CONCAT(STR(?this), '#MF_03143a5')) AS ?namedpart5) . BIND(URI(CONCAT(STR(?this), '#MF_03143a6')) AS ?annotation6) . BIND(URI(CONCAT(STR(?this), '#MF_03143a7')) AS ?annotation7) . BIND(URI(CONCAT(STR(?this), '#MF_03143a9')) AS ?annotation9) . BIND(URI(CONCAT(STR(?this), '#MF_03143a11')) AS ?annotation11) . BIND(URI(CONCAT(STR(?this), '#MF_03143a13')) AS ?annotation13) . BIND(URI(CONCAT(STR(?this), '#MF_03143a15')) AS ?annotation15) . BIND(URI(CONCAT(STR(?this), '#MF_03143a17')) AS ?annotation17) . BIND(URI(CONCAT(STR(?this), '#MF_03143a18')) AS ?annotation18) . BIND(URI(CONCAT(STR(?this), '#MF_03143a19')) AS ?annotation19) . BIND(URI(CONCAT(STR(?this), '#MF_03143a20')) AS ?annotation20) . BIND(URI(CONCAT(STR(?this), '#MF_03143a21')) AS ?annotation21) . BIND(URI(CONCAT(STR(?this), '#MF_03143a22')) AS ?annotation22) . BIND(URI(CONCAT(STR(?this), '#MF_03143a23')) AS ?annotation23) . BIND(URI(CONCAT(STR(?this), '#MF_03143a24')) AS ?annotation24) . BIND(URI(CONCAT(STR(?this), '#MF_03143a26')) AS ?annotation26) . BIND(URI(CONCAT(STR(?this), '#MF_03143a27')) AS ?annotation27) . BIND(URI(CONCAT(STR(?this), '#MF_03143a28')) AS ?annotation28) . BIND(URI(CONCAT(STR(?this), '#MF_03143a29')) AS ?annotation29) . BIND(URI(CONCAT(STR(?this), '#MF_03143a30')) AS ?annotation30) . OPTIONAL { ?this up:sequence ?thisSequence . ?thisSequence rdf:value ?thisSequenceValue . ?templateMotifMatch253 faldo:location ?templateMotifSequenceMatchRegionP07547254 ; edam:is_output_of ?templateMotifSequenceProfileAlignmentOperationP07547256 ; rdf:type edam:data_0869 ; rdf:value ?templateMotifCigarP07547MF_03143249 . ?templateMotifSequenceMatchRegionP07547254 faldo:begin ?templateMotifSequenceMatchBeginP07547255 . ?templateMotifSequenceMatchBeginP07547255 faldo:position ?templateMotifSequenceMatchBeginPositionP07547250 ; faldo:reference isoform:P07547-1 . ?templateMotifSequenceProfileAlignmentOperationP07547256 edam:has_input signature:MF_03143 ; rdf:type edam:operation_0300 . ?targetMotifMatch257 faldo:location ?targetMotifMatchRegionMatch258 ; edam:is_output_of ?targetMotifSequenceAlignmentOperationMF_03143260 ; rdf:type edam:data_0869 ; rdf:value ?targetMotifMatchCigarP07547MF_03143251 . ?targetMotifMatchRegionMatch258 faldo:begin ?targetMotifMatchRegionMatchBeginMF_03143259 . ?targetMotifMatchRegionMatchBeginMF_03143259 faldo:position ?targetMotifMatchRegionMatchBeginPositionMF_03143252 ; faldo:reference ?thisSequence . ?targetMotifSequenceAlignmentOperationMF_03143260 edam:has_input signature:MF_03143 ; rdf:type edam:operation_0300 . BIND(1 AS ?thisPositionOn39) . BIND(STRLEN(REPLACE(SUBSTR(?templateMotifCigarP07547MF_03143249, 1, (STRLEN(?templateMotifCigarP07547MF_03143249) - STRLEN(REPLACE(?templateMotifCigarP07547MF_03143249, CONCAT('^(?:-*[^-]){', STR(((384 - ?templateMotifSequenceMatchBeginPositionP07547250) + 1)), '}'), '')))), '[a-z]', '')) AS ?step1261) . BIND((STRLEN(SUBSTR(?targetMotifMatchCigarP07547MF_03143251, 1, (STRLEN(?targetMotifMatchCigarP07547MF_03143251) - STRLEN(REPLACE(?targetMotifMatchCigarP07547MF_03143251, CONCAT('^(?:[a-z]*(?:[A-Z]|-)){', STR(?step1261), '}'), ''))))) - STRLEN(REPLACE(SUBSTR(?targetMotifMatchCigarP07547MF_03143251, 1, (STRLEN(?targetMotifMatchCigarP07547MF_03143251) - STRLEN(REPLACE(?targetMotifMatchCigarP07547MF_03143251, CONCAT('^(?:[a-z]*(?:[A-Z]|-)){', STR(?step1261), '}'), '')))), '[^-]', ''))) AS ?step2262) . BIND(((?step2262 + ?targetMotifMatchRegionMatchBeginPositionMF_03143252) - 1) AS ?thisPositionOn40) . BIND(?this AS ?pfs1t263) . BIND(URI(CONCAT(STR(?thisSequence), '#position', STR(?thisPositionOn39))) AS ?pfsb37) . BIND(URI(CONCAT(STR(?thisSequence), '#position', STR(?thisPositionOn40))) AS ?pfse38) . FILTER ((BOUND(?thisPositionOn39) && BOUND(?thisPositionOn40))) . BIND(URI(CONCAT(STR(?this), '#MF_03143a36')) AS ?annotation36) . BIND(?this AS ?pfs35) . } OPTIONAL { ?this up:sequence ?thisSequence . ?thisSequence rdf:value ?thisSequenceValue . ?templateMotifMatch268 faldo:location ?templateMotifSequenceMatchRegionP07547269 ; edam:is_output_of ?templateMotifSequenceProfileAlignmentOperationP07547271 ; rdf:type edam:data_0869 ; rdf:value ?templateMotifCigarP07547MF_03143264 . ?templateMotifSequenceMatchRegionP07547269 faldo:begin ?templateMotifSequenceMatchBeginP07547270 . ?templateMotifSequenceMatchBeginP07547270 faldo:position ?templateMotifSequenceMatchBeginPositionP07547265 ; faldo:reference isoform:P07547-1 . ?templateMotifSequenceProfileAlignmentOperationP07547271 edam:has_input signature:MF_03143 ; rdf:type edam:operation_0300 . ?targetMotifMatch272 faldo:location ?targetMotifMatchRegionMatch273 ; edam:is_output_of ?targetMotifSequenceAlignmentOperationMF_03143275 ; rdf:type edam:data_0869 ; rdf:value ?targetMotifMatchCigarP07547MF_03143266 . ?targetMotifMatchRegionMatch273 faldo:begin ?targetMotifMatchRegionMatchBeginMF_03143274 . ?targetMotifMatchRegionMatchBeginMF_03143274 faldo:position ?targetMotifMatchRegionMatchBeginPositionMF_03143267 ; faldo:reference ?thisSequence . ?targetMotifSequenceAlignmentOperationMF_03143275 edam:has_input signature:MF_03143 ; rdf:type edam:operation_0300 . BIND(STRLEN(REPLACE(SUBSTR(?templateMotifCigarP07547MF_03143264, 1, (STRLEN(?templateMotifCigarP07547MF_03143264) - STRLEN(REPLACE(?templateMotifCigarP07547MF_03143264, CONCAT('^(?:-*[^-]){', STR(((397 - ?templateMotifSequenceMatchBeginPositionP07547265) + 1)), '}'), '')))), '[a-z]', '')) AS ?step1276) . BIND((STRLEN(SUBSTR(?targetMotifMatchCigarP07547MF_03143266, 1, (STRLEN(?targetMotifMatchCigarP07547MF_03143266) - STRLEN(REPLACE(?targetMotifMatchCigarP07547MF_03143266, CONCAT('^(?:[a-z]*(?:[A-Z]|-)){', STR(?step1276), '}'), ''))))) - STRLEN(REPLACE(SUBSTR(?targetMotifMatchCigarP07547MF_03143266, 1, (STRLEN(?targetMotifMatchCigarP07547MF_03143266) - STRLEN(REPLACE(?targetMotifMatchCigarP07547MF_03143266, CONCAT('^(?:[a-z]*(?:[A-Z]|-)){', STR(?step1276), '}'), '')))), '[^-]', ''))) AS ?step2277) . BIND(((?step2277 + ?targetMotifMatchRegionMatchBeginPositionMF_03143267) - 1) AS ?thisPositionOn45) . BIND(STRLEN(REPLACE(SUBSTR(?templateMotifCigarP07547MF_03143264, 1, (STRLEN(?templateMotifCigarP07547MF_03143264) - STRLEN(REPLACE(?templateMotifCigarP07547MF_03143264, CONCAT('^(?:-*[^-]){', STR(((842 - ?templateMotifSequenceMatchBeginPositionP07547265) + 1)), '}'), '')))), '[a-z]', '')) AS ?step1278) . BIND((STRLEN(SUBSTR(?targetMotifMatchCigarP07547MF_03143266, 1, (STRLEN(?targetMotifMatchCigarP07547MF_03143266) - STRLEN(REPLACE(?targetMotifMatchCigarP07547MF_03143266, CONCAT('^(?:[a-z]*(?:[A-Z]|-)){', STR(?step1278), '}'), ''))))) - STRLEN(REPLACE(SUBSTR(?targetMotifMatchCigarP07547MF_03143266, 1, (STRLEN(?targetMotifMatchCigarP07547MF_03143266) - STRLEN(REPLACE(?targetMotifMatchCigarP07547MF_03143266, CONCAT('^(?:[a-z]*(?:[A-Z]|-)){', STR(?step1278), '}'), '')))), '[^-]', ''))) AS ?step2279) . BIND(((?step2279 + ?targetMotifMatchRegionMatchBeginPositionMF_03143267) - 1) AS ?thisPositionOn46) . BIND(?this AS ?pfs1t280) . BIND(URI(CONCAT(STR(?thisSequence), '#position', STR(?thisPositionOn45))) AS ?pfsb43) . BIND(URI(CONCAT(STR(?thisSequence), '#position', STR(?thisPositionOn46))) AS ?pfse44) . FILTER ((BOUND(?thisPositionOn45) && BOUND(?thisPositionOn46))) . BIND(URI(CONCAT(STR(?this), '#MF_03143a42')) AS ?annotation42) . BIND(?this AS ?pfs41) . } OPTIONAL { ?this up:sequence ?thisSequence . ?thisSequence rdf:value ?thisSequenceValue . ?templateMotifMatch285 faldo:location ?templateMotifSequenceMatchRegionP07547286 ; edam:is_output_of ?templateMotifSequenceProfileAlignmentOperationP07547288 ; rdf:type edam:data_0869 ; rdf:value ?templateMotifCigarP07547MF_03143281 . ?templateMotifSequenceMatchRegionP07547286 faldo:begin ?templateMotifSequenceMatchBeginP07547287 . ?templateMotifSequenceMatchBeginP07547287 faldo:position ?templateMotifSequenceMatchBeginPositionP07547282 ; faldo:reference isoform:P07547-1 . ?templateMotifSequenceProfileAlignmentOperationP07547288 edam:has_input signature:MF_03143 ; rdf:type edam:operation_0300 . ?targetMotifMatch289 faldo:location ?targetMotifMatchRegionMatch290 ; edam:is_output_of ?targetMotifSequenceAlignmentOperationMF_03143292 ; rdf:type edam:data_0869 ; rdf:value ?targetMotifMatchCigarP07547MF_03143283 . ?targetMotifMatchRegionMatch290 faldo:begin ?targetMotifMatchRegionMatchBeginMF_03143291 . ?targetMotifMatchRegionMatchBeginMF_03143291 faldo:position ?targetMotifMatchRegionMatchBeginPositionMF_03143284 ; faldo:reference ?thisSequence . ?targetMotifSequenceAlignmentOperationMF_03143292 edam:has_input signature:MF_03143 ; rdf:type edam:operation_0300 . BIND(STRLEN(REPLACE(SUBSTR(?templateMotifCigarP07547MF_03143281, 1, (STRLEN(?templateMotifCigarP07547MF_03143281) - STRLEN(REPLACE(?templateMotifCigarP07547MF_03143281, CONCAT('^(?:-*[^-]){', STR(((863 - ?templateMotifSequenceMatchBeginPositionP07547282) + 1)), '}'), '')))), '[a-z]', '')) AS ?step1293) . BIND((STRLEN(SUBSTR(?targetMotifMatchCigarP07547MF_03143283, 1, (STRLEN(?targetMotifMatchCigarP07547MF_03143283) - STRLEN(REPLACE(?targetMotifMatchCigarP07547MF_03143283, CONCAT('^(?:[a-z]*(?:[A-Z]|-)){', STR(?step1293), '}'), ''))))) - STRLEN(REPLACE(SUBSTR(?targetMotifMatchCigarP07547MF_03143283, 1, (STRLEN(?targetMotifMatchCigarP07547MF_03143283) - STRLEN(REPLACE(?targetMotifMatchCigarP07547MF_03143283, CONCAT('^(?:[a-z]*(?:[A-Z]|-)){', STR(?step1293), '}'), '')))), '[^-]', ''))) AS ?step2294) . BIND(((?step2294 + ?targetMotifMatchRegionMatchBeginPositionMF_03143284) - 1) AS ?thisPositionOn51) . BIND(STRLEN(REPLACE(SUBSTR(?templateMotifCigarP07547MF_03143281, 1, (STRLEN(?templateMotifCigarP07547MF_03143281) - STRLEN(REPLACE(?templateMotifCigarP07547MF_03143281, CONCAT('^(?:-*[^-]){', STR(((1055 - ?templateMotifSequenceMatchBeginPositionP07547282) + 1)), '}'), '')))), '[a-z]', '')) AS ?step1295) . BIND((STRLEN(SUBSTR(?targetMotifMatchCigarP07547MF_03143283, 1, (STRLEN(?targetMotifMatchCigarP07547MF_03143283) - STRLEN(REPLACE(?targetMotifMatchCigarP07547MF_03143283, CONCAT('^(?:[a-z]*(?:[A-Z]|-)){', STR(?step1295), '}'), ''))))) - STRLEN(REPLACE(SUBSTR(?targetMotifMatchCigarP07547MF_03143283, 1, (STRLEN(?targetMotifMatchCigarP07547MF_03143283) - STRLEN(REPLACE(?targetMotifMatchCigarP07547MF_03143283, CONCAT('^(?:[a-z]*(?:[A-Z]|-)){', STR(?step1295), '}'), '')))), '[^-]', ''))) AS ?step2296) . BIND(((?step2296 + ?targetMotifMatchRegionMatchBeginPositionMF_03143284) - 1) AS ?thisPositionOn52) . BIND(?this AS ?pfs1t297) . BIND(URI(CONCAT(STR(?thisSequence), '#position', STR(?thisPositionOn51))) AS ?pfsb49) . BIND(URI(CONCAT(STR(?thisSequence), '#position', STR(?thisPositionOn52))) AS ?pfse50) . FILTER ((BOUND(?thisPositionOn51) && BOUND(?thisPositionOn52))) . BIND(URI(CONCAT(STR(?this), '#MF_03143a48')) AS ?annotation48) . BIND(?this AS ?pfs47) . } OPTIONAL { ?this up:sequence ?thisSequence . ?thisSequence rdf:value ?thisSequenceValue . ?templateMotifMatch302 faldo:location ?templateMotifSequenceMatchRegionP07547303 ; edam:is_output_of ?templateMotifSequenceProfileAlignmentOperationP07547305 ; rdf:type edam:data_0869 ; rdf:value ?templateMotifCigarP07547MF_03143298 . ?templateMotifSequenceMatchRegionP07547303 faldo:begin ?templateMotifSequenceMatchBeginP07547304 . ?templateMotifSequenceMatchBeginP07547304 faldo:position ?templateMotifSequenceMatchBeginPositionP07547299 ; faldo:reference isoform:P07547-1 . ?templateMotifSequenceProfileAlignmentOperationP07547305 edam:has_input signature:MF_03143 ; rdf:type edam:operation_0300 . ?targetMotifMatch306 faldo:location ?targetMotifMatchRegionMatch307 ; edam:is_output_of ?targetMotifSequenceAlignmentOperationMF_03143309 ; rdf:type edam:data_0869 ; rdf:value ?targetMotifMatchCigarP07547MF_03143300 . ?targetMotifMatchRegionMatch307 faldo:begin ?targetMotifMatchRegionMatchBeginMF_03143308 . ?targetMotifMatchRegionMatchBeginMF_03143308 faldo:position ?targetMotifMatchRegionMatchBeginPositionMF_03143301 ; faldo:reference ?thisSequence . ?targetMotifSequenceAlignmentOperationMF_03143309 edam:has_input signature:MF_03143 ; rdf:type edam:operation_0300 . BIND(STRLEN(REPLACE(SUBSTR(?templateMotifCigarP07547MF_03143298, 1, (STRLEN(?templateMotifCigarP07547MF_03143298) - STRLEN(REPLACE(?templateMotifCigarP07547MF_03143298, CONCAT('^(?:-*[^-]){', STR(((1056 - ?templateMotifSequenceMatchBeginPositionP07547299) + 1)), '}'), '')))), '[a-z]', '')) AS ?step1310) . BIND((STRLEN(SUBSTR(?targetMotifMatchCigarP07547MF_03143300, 1, (STRLEN(?targetMotifMatchCigarP07547MF_03143300) - STRLEN(REPLACE(?targetMotifMatchCigarP07547MF_03143300, CONCAT('^(?:[a-z]*(?:[A-Z]|-)){', STR(?step1310), '}'), ''))))) - STRLEN(REPLACE(SUBSTR(?targetMotifMatchCigarP07547MF_03143300, 1, (STRLEN(?targetMotifMatchCigarP07547MF_03143300) - STRLEN(REPLACE(?targetMotifMatchCigarP07547MF_03143300, CONCAT('^(?:[a-z]*(?:[A-Z]|-)){', STR(?step1310), '}'), '')))), '[^-]', ''))) AS ?step2311) . BIND(((?step2311 + ?targetMotifMatchRegionMatchBeginPositionMF_03143301) - 1) AS ?thisPositionOn57) . BIND(STRLEN(REPLACE(SUBSTR(?templateMotifCigarP07547MF_03143298, 1, (STRLEN(?templateMotifCigarP07547MF_03143298) - STRLEN(REPLACE(?templateMotifCigarP07547MF_03143298, CONCAT('^(?:-*[^-]){', STR(((1276 - ?templateMotifSequenceMatchBeginPositionP07547299) + 1)), '}'), '')))), '[a-z]', '')) AS ?step1312) . BIND((STRLEN(SUBSTR(?targetMotifMatchCigarP07547MF_03143300, 1, (STRLEN(?targetMotifMatchCigarP07547MF_03143300) - STRLEN(REPLACE(?targetMotifMatchCigarP07547MF_03143300, CONCAT('^(?:[a-z]*(?:[A-Z]|-)){', STR(?step1312), '}'), ''))))) - STRLEN(REPLACE(SUBSTR(?targetMotifMatchCigarP07547MF_03143300, 1, (STRLEN(?targetMotifMatchCigarP07547MF_03143300) - STRLEN(REPLACE(?targetMotifMatchCigarP07547MF_03143300, CONCAT('^(?:[a-z]*(?:[A-Z]|-)){', STR(?step1312), '}'), '')))), '[^-]', ''))) AS ?step2313) . BIND(((?step2313 + ?targetMotifMatchRegionMatchBeginPositionMF_03143301) - 1) AS ?thisPositionOn58) . BIND(?this AS ?pfs1t314) . BIND(URI(CONCAT(STR(?thisSequence), '#position', STR(?thisPositionOn57))) AS ?pfsb55) . BIND(URI(CONCAT(STR(?thisSequence), '#position', STR(?thisPositionOn58))) AS ?pfse56) . FILTER ((BOUND(?thisPositionOn57) && BOUND(?thisPositionOn58))) . BIND(URI(CONCAT(STR(?this), '#MF_03143a54')) AS ?annotation54) . BIND(?this AS ?pfs53) . } OPTIONAL { ?this up:sequence ?thisSequence . ?thisSequence rdf:value ?thisSequenceValue . ?templateMotifMatch319 faldo:location ?templateMotifSequenceMatchRegionP07547320 ; edam:is_output_of ?templateMotifSequenceProfileAlignmentOperationP07547322 ; rdf:type edam:data_0869 ; rdf:value ?templateMotifCigarP07547MF_03143315 . ?templateMotifSequenceMatchRegionP07547320 faldo:begin ?templateMotifSequenceMatchBeginP07547321 . ?templateMotifSequenceMatchBeginP07547321 faldo:position ?templateMotifSequenceMatchBeginPositionP07547316 ; faldo:reference isoform:P07547-1 . ?templateMotifSequenceProfileAlignmentOperationP07547322 edam:has_input signature:MF_03143 ; rdf:type edam:operation_0300 . ?targetMotifMatch323 faldo:location ?targetMotifMatchRegionMatch324 ; edam:is_output_of ?targetMotifSequenceAlignmentOperationMF_03143326 ; rdf:type edam:data_0869 ; rdf:value ?targetMotifMatchCigarP07547MF_03143317 . ?targetMotifMatchRegionMatch324 faldo:begin ?targetMotifMatchRegionMatchBeginMF_03143325 . ?targetMotifMatchRegionMatchBeginMF_03143325 faldo:position ?targetMotifMatchRegionMatchBeginPositionMF_03143318 ; faldo:reference ?thisSequence . ?targetMotifSequenceAlignmentOperationMF_03143326 edam:has_input signature:MF_03143 ; rdf:type edam:operation_0300 . BIND(STRLEN(REPLACE(SUBSTR(?templateMotifCigarP07547MF_03143315, 1, (STRLEN(?templateMotifCigarP07547MF_03143315) - STRLEN(REPLACE(?templateMotifCigarP07547MF_03143315, CONCAT('^(?:-*[^-]){', STR(((1289 - ?templateMotifSequenceMatchBeginPositionP07547316) + 1)), '}'), '')))), '[a-z]', '')) AS ?step1327) . BIND((STRLEN(SUBSTR(?targetMotifMatchCigarP07547MF_03143317, 1, (STRLEN(?targetMotifMatchCigarP07547MF_03143317) - STRLEN(REPLACE(?targetMotifMatchCigarP07547MF_03143317, CONCAT('^(?:[a-z]*(?:[A-Z]|-)){', STR(?step1327), '}'), ''))))) - STRLEN(REPLACE(SUBSTR(?targetMotifMatchCigarP07547MF_03143317, 1, (STRLEN(?targetMotifMatchCigarP07547MF_03143317) - STRLEN(REPLACE(?targetMotifMatchCigarP07547MF_03143317, CONCAT('^(?:[a-z]*(?:[A-Z]|-)){', STR(?step1327), '}'), '')))), '[^-]', ''))) AS ?step2328) . BIND(((?step2328 + ?targetMotifMatchRegionMatchBeginPositionMF_03143318) - 1) AS ?thisPositionOn63) . BIND(STRLEN(?thisSequenceValue) AS ?thisPositionOn64) . BIND(?this AS ?pfs1t329) . BIND(URI(CONCAT(STR(?thisSequence), '#position', STR(?thisPositionOn63))) AS ?pfsb61) . BIND(URI(CONCAT(STR(?thisSequence), '#position', STR(?thisPositionOn64))) AS ?pfse62) . FILTER ((BOUND(?thisPositionOn63) && BOUND(?thisPositionOn64))) . BIND(URI(CONCAT(STR(?this), '#MF_03143a60')) AS ?annotation60) . BIND(?this AS ?pfs59) . } OPTIONAL { ?this up:sequence ?thisSequence . ?thisSequence rdf:value ?thisSequenceValue . ?templateMotifMatch334 faldo:location ?templateMotifSequenceMatchRegionP07547335 ; edam:is_output_of ?templateMotifSequenceProfileAlignmentOperationP07547337 ; rdf:type edam:data_0869 ; rdf:value ?templateMotifCigarP07547MF_03143330 . ?templateMotifSequenceMatchRegionP07547335 faldo:begin ?templateMotifSequenceMatchBeginP07547336 . ?templateMotifSequenceMatchBeginP07547336 faldo:position ?templateMotifSequenceMatchBeginPositionP07547331 ; faldo:reference isoform:P07547-1 . ?templateMotifSequenceProfileAlignmentOperationP07547337 edam:has_input signature:MF_03143 ; rdf:type edam:operation_0300 . ?targetMotifMatch338 faldo:location ?targetMotifMatchRegionMatch339 ; edam:is_output_of ?targetMotifSequenceAlignmentOperationMF_03143341 ; rdf:type edam:data_0869 ; rdf:value ?targetMotifMatchCigarP07547MF_03143332 . ?targetMotifMatchRegionMatch339 faldo:begin ?targetMotifMatchRegionMatchBeginMF_03143340 . ?targetMotifMatchRegionMatchBeginMF_03143340 faldo:position ?targetMotifMatchRegionMatchBeginPositionMF_03143333 ; faldo:reference ?thisSequence . ?targetMotifSequenceAlignmentOperationMF_03143341 edam:has_input signature:MF_03143 ; rdf:type edam:operation_0300 . BIND(STRLEN(REPLACE(SUBSTR(?templateMotifCigarP07547MF_03143330, 1, (STRLEN(?templateMotifCigarP07547MF_03143330) - STRLEN(REPLACE(?templateMotifCigarP07547MF_03143330, CONCAT('^(?:-*[^-]){', STR(((44 - ?templateMotifSequenceMatchBeginPositionP07547331) + 1)), '}'), '')))), '[a-z]', '')) AS ?step1342) . BIND((STRLEN(SUBSTR(?targetMotifMatchCigarP07547MF_03143332, 1, (STRLEN(?targetMotifMatchCigarP07547MF_03143332) - STRLEN(REPLACE(?targetMotifMatchCigarP07547MF_03143332, CONCAT('^(?:[a-z]*(?:[A-Z]|-)){', STR(?step1342), '}'), ''))))) - STRLEN(REPLACE(SUBSTR(?targetMotifMatchCigarP07547MF_03143332, 1, (STRLEN(?targetMotifMatchCigarP07547MF_03143332) - STRLEN(REPLACE(?targetMotifMatchCigarP07547MF_03143332, CONCAT('^(?:[a-z]*(?:[A-Z]|-)){', STR(?step1342), '}'), '')))), '[^-]', ''))) AS ?step2343) . BIND(((?step2343 + ?targetMotifMatchRegionMatchBeginPositionMF_03143333) - 1) AS ?thisPositionOn70) . BIND(STRLEN(REPLACE(SUBSTR(?templateMotifCigarP07547MF_03143330, 1, (STRLEN(?templateMotifCigarP07547MF_03143330) - STRLEN(REPLACE(?templateMotifCigarP07547MF_03143330, CONCAT('^(?:-*[^-]){', STR(((46 - ?templateMotifSequenceMatchBeginPositionP07547331) + 1)), '}'), '')))), '[a-z]', '')) AS ?step1344) . BIND((STRLEN(SUBSTR(?targetMotifMatchCigarP07547MF_03143332, 1, (STRLEN(?targetMotifMatchCigarP07547MF_03143332) - STRLEN(REPLACE(?targetMotifMatchCigarP07547MF_03143332, CONCAT('^(?:[a-z]*(?:[A-Z]|-)){', STR(?step1344), '}'), ''))))) - STRLEN(REPLACE(SUBSTR(?targetMotifMatchCigarP07547MF_03143332, 1, (STRLEN(?targetMotifMatchCigarP07547MF_03143332) - STRLEN(REPLACE(?targetMotifMatchCigarP07547MF_03143332, CONCAT('^(?:[a-z]*(?:[A-Z]|-)){', STR(?step1344), '}'), '')))), '[^-]', ''))) AS ?step2345) . BIND(((?step2345 + ?targetMotifMatchRegionMatchBeginPositionMF_03143333) - 1) AS ?thisPositionOn71) . BIND(?this AS ?pfs1t346) . BIND(URI(CONCAT(STR(?thisSequence), '#position', STR(?thisPositionOn70))) AS ?pfsb67) . BIND(URI(CONCAT(STR(?thisSequence), '#position', STR(?thisPositionOn71))) AS ?pfse68) . FILTER (REGEX('D[TSDQ][NRT]', SUBSTR(?thisSequenceValue, ?thisPositionOn70, (?thisPositionOn71 - ?thisPositionOn70)))) . BIND(URI(CONCAT(STR(?this), '#MF_03143a66')) AS ?annotation66) . BIND(?this AS ?pfs65) . } OPTIONAL { ?this up:sequence ?thisSequence . ?thisSequence rdf:value ?thisSequenceValue . ?templateMotifMatch351 faldo:location ?templateMotifSequenceMatchRegionP07547352 ; edam:is_output_of ?templateMotifSequenceProfileAlignmentOperationP07547354 ; rdf:type edam:data_0869 ; rdf:value ?templateMotifCigarP07547MF_03143347 . ?templateMotifSequenceMatchRegionP07547352 faldo:begin ?templateMotifSequenceMatchBeginP07547353 . ?templateMotifSequenceMatchBeginP07547353 faldo:position ?templateMotifSequenceMatchBeginPositionP07547348 ; faldo:reference isoform:P07547-1 . ?templateMotifSequenceProfileAlignmentOperationP07547354 edam:has_input signature:MF_03143 ; rdf:type edam:operation_0300 . ?targetMotifMatch355 faldo:location ?targetMotifMatchRegionMatch356 ; edam:is_output_of ?targetMotifSequenceAlignmentOperationMF_03143358 ; rdf:type edam:data_0869 ; rdf:value ?targetMotifMatchCigarP07547MF_03143349 . ?targetMotifMatchRegionMatch356 faldo:begin ?targetMotifMatchRegionMatchBeginMF_03143357 . ?targetMotifMatchRegionMatchBeginMF_03143357 faldo:position ?targetMotifMatchRegionMatchBeginPositionMF_03143350 ; faldo:reference ?thisSequence . ?targetMotifSequenceAlignmentOperationMF_03143358 edam:has_input signature:MF_03143 ; rdf:type edam:operation_0300 . BIND(STRLEN(REPLACE(SUBSTR(?templateMotifCigarP07547MF_03143347, 1, (STRLEN(?templateMotifCigarP07547MF_03143347) - STRLEN(REPLACE(?templateMotifCigarP07547MF_03143347, CONCAT('^(?:-*[^-]){', STR(((81 - ?templateMotifSequenceMatchBeginPositionP07547348) + 1)), '}'), '')))), '[a-z]', '')) AS ?step1359) . BIND((STRLEN(SUBSTR(?targetMotifMatchCigarP07547MF_03143349, 1, (STRLEN(?targetMotifMatchCigarP07547MF_03143349) - STRLEN(REPLACE(?targetMotifMatchCigarP07547MF_03143349, CONCAT('^(?:[a-z]*(?:[A-Z]|-)){', STR(?step1359), '}'), ''))))) - STRLEN(REPLACE(SUBSTR(?targetMotifMatchCigarP07547MF_03143349, 1, (STRLEN(?targetMotifMatchCigarP07547MF_03143349) - STRLEN(REPLACE(?targetMotifMatchCigarP07547MF_03143349, CONCAT('^(?:[a-z]*(?:[A-Z]|-)){', STR(?step1359), '}'), '')))), '[^-]', ''))) AS ?step2360) . BIND(((?step2360 + ?targetMotifMatchRegionMatchBeginPositionMF_03143350) - 1) AS ?thisPositionOn77) . BIND(STRLEN(REPLACE(SUBSTR(?templateMotifCigarP07547MF_03143347, 1, (STRLEN(?templateMotifCigarP07547MF_03143347) - STRLEN(REPLACE(?templateMotifCigarP07547MF_03143347, CONCAT('^(?:-*[^-]){', STR(((84 - ?templateMotifSequenceMatchBeginPositionP07547348) + 1)), '}'), '')))), '[a-z]', '')) AS ?step1361) . BIND((STRLEN(SUBSTR(?targetMotifMatchCigarP07547MF_03143349, 1, (STRLEN(?targetMotifMatchCigarP07547MF_03143349) - STRLEN(REPLACE(?targetMotifMatchCigarP07547MF_03143349, CONCAT('^(?:[a-z]*(?:[A-Z]|-)){', STR(?step1361), '}'), ''))))) - STRLEN(REPLACE(SUBSTR(?targetMotifMatchCigarP07547MF_03143349, 1, (STRLEN(?targetMotifMatchCigarP07547MF_03143349) - STRLEN(REPLACE(?targetMotifMatchCigarP07547MF_03143349, CONCAT('^(?:[a-z]*(?:[A-Z]|-)){', STR(?step1361), '}'), '')))), '[^-]', ''))) AS ?step2362) . BIND(((?step2362 + ?targetMotifMatchRegionMatchBeginPositionMF_03143350) - 1) AS ?thisPositionOn78) . BIND(?this AS ?pfs1t363) . BIND(URI(CONCAT(STR(?thisSequence), '#position', STR(?thisPositionOn77))) AS ?pfsb74) . BIND(URI(CONCAT(STR(?thisSequence), '#position', STR(?thisPositionOn78))) AS ?pfse75) . FILTER (REGEX('E[ARNDCQEGHILKMFPSTWYVBZJUOX]{2)K', SUBSTR(?thisSequenceValue, ?thisPositionOn77, (?thisPositionOn78 - ?thisPositionOn77)))) . BIND(URI(CONCAT(STR(?this), '#MF_03143a73')) AS ?annotation73) . BIND(?this AS ?pfs72) . } OPTIONAL { ?this up:sequence ?thisSequence . ?thisSequence rdf:value ?thisSequenceValue . ?templateMotifMatch368 faldo:location ?templateMotifSequenceMatchRegionP07547369 ; edam:is_output_of ?templateMotifSequenceProfileAlignmentOperationP07547371 ; rdf:type edam:data_0869 ; rdf:value ?templateMotifCigarP07547MF_03143364 . ?templateMotifSequenceMatchRegionP07547369 faldo:begin ?templateMotifSequenceMatchBeginP07547370 . ?templateMotifSequenceMatchBeginP07547370 faldo:position ?templateMotifSequenceMatchBeginPositionP07547365 ; faldo:reference isoform:P07547-1 . ?templateMotifSequenceProfileAlignmentOperationP07547371 edam:has_input signature:MF_03143 ; rdf:type edam:operation_0300 . ?targetMotifMatch372 faldo:location ?targetMotifMatchRegionMatch373 ; edam:is_output_of ?targetMotifSequenceAlignmentOperationMF_03143375 ; rdf:type edam:data_0869 ; rdf:value ?targetMotifMatchCigarP07547MF_03143366 . ?targetMotifMatchRegionMatch373 faldo:begin ?targetMotifMatchRegionMatchBeginMF_03143374 . ?targetMotifMatchRegionMatchBeginMF_03143374 faldo:position ?targetMotifMatchRegionMatchBeginPositionMF_03143367 ; faldo:reference ?thisSequence . ?targetMotifSequenceAlignmentOperationMF_03143375 edam:has_input signature:MF_03143 ; rdf:type edam:operation_0300 . BIND(STRLEN(REPLACE(SUBSTR(?templateMotifCigarP07547MF_03143364, 1, (STRLEN(?templateMotifCigarP07547MF_03143364) - STRLEN(REPLACE(?templateMotifCigarP07547MF_03143364, CONCAT('^(?:-*[^-]){', STR(((114 - ?templateMotifSequenceMatchBeginPositionP07547365) + 1)), '}'), '')))), '[a-z]', '')) AS ?step1376) . BIND((STRLEN(SUBSTR(?targetMotifMatchCigarP07547MF_03143366, 1, (STRLEN(?targetMotifMatchCigarP07547MF_03143366) - STRLEN(REPLACE(?targetMotifMatchCigarP07547MF_03143366, CONCAT('^(?:[a-z]*(?:[A-Z]|-)){', STR(?step1376), '}'), ''))))) - STRLEN(REPLACE(SUBSTR(?targetMotifMatchCigarP07547MF_03143366, 1, (STRLEN(?targetMotifMatchCigarP07547MF_03143366) - STRLEN(REPLACE(?targetMotifMatchCigarP07547MF_03143366, CONCAT('^(?:[a-z]*(?:[A-Z]|-)){', STR(?step1376), '}'), '')))), '[^-]', ''))) AS ?step2377) . BIND(((?step2377 + ?targetMotifMatchRegionMatchBeginPositionMF_03143367) - 1) AS ?thisPositionOn84) . BIND(STRLEN(REPLACE(SUBSTR(?templateMotifCigarP07547MF_03143364, 1, (STRLEN(?templateMotifCigarP07547MF_03143364) - STRLEN(REPLACE(?templateMotifCigarP07547MF_03143364, CONCAT('^(?:-*[^-]){', STR(((116 - ?templateMotifSequenceMatchBeginPositionP07547365) + 1)), '}'), '')))), '[a-z]', '')) AS ?step1378) . BIND((STRLEN(SUBSTR(?targetMotifMatchCigarP07547MF_03143366, 1, (STRLEN(?targetMotifMatchCigarP07547MF_03143366) - STRLEN(REPLACE(?targetMotifMatchCigarP07547MF_03143366, CONCAT('^(?:[a-z]*(?:[A-Z]|-)){', STR(?step1378), '}'), ''))))) - STRLEN(REPLACE(SUBSTR(?targetMotifMatchCigarP07547MF_03143366, 1, (STRLEN(?targetMotifMatchCigarP07547MF_03143366) - STRLEN(REPLACE(?targetMotifMatchCigarP07547MF_03143366, CONCAT('^(?:[a-z]*(?:[A-Z]|-)){', STR(?step1378), '}'), '')))), '[^-]', ''))) AS ?step2379) . BIND(((?step2379 + ?targetMotifMatchRegionMatchBeginPositionMF_03143367) - 1) AS ?thisPositionOn85) . BIND(?this AS ?pfs1t380) . BIND(URI(CONCAT(STR(?thisSequence), '#position', STR(?thisPositionOn84))) AS ?pfsb81) . BIND(URI(CONCAT(STR(?thisSequence), '#position', STR(?thisPositionOn85))) AS ?pfse82) . FILTER (REGEX('GG[VI]', SUBSTR(?thisSequenceValue, ?thisPositionOn84, (?thisPositionOn85 - ?thisPositionOn84)))) . BIND(URI(CONCAT(STR(?this), '#MF_03143a80')) AS ?annotation80) . BIND(?this AS ?pfs79) . } OPTIONAL { ?this up:sequence ?thisSequence . ?thisSequence rdf:value ?thisSequenceValue . ?templateMotifMatch385 faldo:location ?templateMotifSequenceMatchRegionP07547386 ; edam:is_output_of ?templateMotifSequenceProfileAlignmentOperationP07547388 ; rdf:type edam:data_0869 ; rdf:value ?templateMotifCigarP07547MF_03143381 . ?templateMotifSequenceMatchRegionP07547386 faldo:begin ?templateMotifSequenceMatchBeginP07547387 . ?templateMotifSequenceMatchBeginP07547387 faldo:position ?templateMotifSequenceMatchBeginPositionP07547382 ; faldo:reference isoform:P07547-1 . ?templateMotifSequenceProfileAlignmentOperationP07547388 edam:has_input signature:MF_03143 ; rdf:type edam:operation_0300 . ?targetMotifMatch389 faldo:location ?targetMotifMatchRegionMatch390 ; edam:is_output_of ?targetMotifSequenceAlignmentOperationMF_03143392 ; rdf:type edam:data_0869 ; rdf:value ?targetMotifMatchCigarP07547MF_03143383 . ?targetMotifMatchRegionMatch390 faldo:begin ?targetMotifMatchRegionMatchBeginMF_03143391 . ?targetMotifMatchRegionMatchBeginMF_03143391 faldo:position ?targetMotifMatchRegionMatchBeginPositionMF_03143384 ; faldo:reference ?thisSequence . ?targetMotifSequenceAlignmentOperationMF_03143392 edam:has_input signature:MF_03143 ; rdf:type edam:operation_0300 . BIND(STRLEN(REPLACE(SUBSTR(?templateMotifCigarP07547MF_03143381, 1, (STRLEN(?templateMotifCigarP07547MF_03143381) - STRLEN(REPLACE(?templateMotifCigarP07547MF_03143381, CONCAT('^(?:-*[^-]){', STR(((139 - ?templateMotifSequenceMatchBeginPositionP07547382) + 1)), '}'), '')))), '[a-z]', '')) AS ?step1393) . BIND((STRLEN(SUBSTR(?targetMotifMatchCigarP07547MF_03143383, 1, (STRLEN(?targetMotifMatchCigarP07547MF_03143383) - STRLEN(REPLACE(?targetMotifMatchCigarP07547MF_03143383, CONCAT('^(?:[a-z]*(?:[A-Z]|-)){', STR(?step1393), '}'), ''))))) - STRLEN(REPLACE(SUBSTR(?targetMotifMatchCigarP07547MF_03143383, 1, (STRLEN(?targetMotifMatchCigarP07547MF_03143383) - STRLEN(REPLACE(?targetMotifMatchCigarP07547MF_03143383, CONCAT('^(?:[a-z]*(?:[A-Z]|-)){', STR(?step1393), '}'), '')))), '[^-]', ''))) AS ?step2394) . BIND(((?step2394 + ?targetMotifMatchRegionMatchBeginPositionMF_03143384) - 1) AS ?thisPositionOn91) . BIND(STRLEN(REPLACE(SUBSTR(?templateMotifCigarP07547MF_03143381, 1, (STRLEN(?templateMotifCigarP07547MF_03143381) - STRLEN(REPLACE(?templateMotifCigarP07547MF_03143381, CONCAT('^(?:-*[^-]){', STR(((140 - ?templateMotifSequenceMatchBeginPositionP07547382) + 1)), '}'), '')))), '[a-z]', '')) AS ?step1395) . BIND((STRLEN(SUBSTR(?targetMotifMatchCigarP07547MF_03143383, 1, (STRLEN(?targetMotifMatchCigarP07547MF_03143383) - STRLEN(REPLACE(?targetMotifMatchCigarP07547MF_03143383, CONCAT('^(?:[a-z]*(?:[A-Z]|-)){', STR(?step1395), '}'), ''))))) - STRLEN(REPLACE(SUBSTR(?targetMotifMatchCigarP07547MF_03143383, 1, (STRLEN(?targetMotifMatchCigarP07547MF_03143383) - STRLEN(REPLACE(?targetMotifMatchCigarP07547MF_03143383, CONCAT('^(?:[a-z]*(?:[A-Z]|-)){', STR(?step1395), '}'), '')))), '[^-]', ''))) AS ?step2396) . BIND(((?step2396 + ?targetMotifMatchRegionMatchBeginPositionMF_03143384) - 1) AS ?thisPositionOn92) . BIND(?this AS ?pfs1t397) . BIND(URI(CONCAT(STR(?thisSequence), '#position', STR(?thisPositionOn91))) AS ?pfsb88) . BIND(URI(CONCAT(STR(?thisSequence), '#position', STR(?thisPositionOn92))) AS ?pfse89) . FILTER (REGEX('T[TS]', SUBSTR(?thisSequenceValue, ?thisPositionOn91, (?thisPositionOn92 - ?thisPositionOn91)))) . BIND(URI(CONCAT(STR(?this), '#MF_03143a87')) AS ?annotation87) . BIND(?this AS ?pfs86) . } OPTIONAL { ?this up:sequence ?thisSequence . ?thisSequence rdf:value ?thisSequenceValue . ?templateMotifMatch402 faldo:location ?templateMotifSequenceMatchRegionP07547403 ; edam:is_output_of ?templateMotifSequenceProfileAlignmentOperationP07547405 ; rdf:type edam:data_0869 ; rdf:value ?templateMotifCigarP07547MF_03143398 . ?templateMotifSequenceMatchRegionP07547403 faldo:begin ?templateMotifSequenceMatchBeginP07547404 . ?templateMotifSequenceMatchBeginP07547404 faldo:position ?templateMotifSequenceMatchBeginPositionP07547399 ; faldo:reference isoform:P07547-1 . ?templateMotifSequenceProfileAlignmentOperationP07547405 edam:has_input signature:MF_03143 ; rdf:type edam:operation_0300 . ?targetMotifMatch406 faldo:location ?targetMotifMatchRegionMatch407 ; edam:is_output_of ?targetMotifSequenceAlignmentOperationMF_03143409 ; rdf:type edam:data_0869 ; rdf:value ?targetMotifMatchCigarP07547MF_03143400 . ?targetMotifMatchRegionMatch407 faldo:begin ?targetMotifMatchRegionMatchBeginMF_03143408 . ?targetMotifMatchRegionMatchBeginMF_03143408 faldo:position ?targetMotifMatchRegionMatchBeginPositionMF_03143401 ; faldo:reference ?thisSequence . ?targetMotifSequenceAlignmentOperationMF_03143409 edam:has_input signature:MF_03143 ; rdf:type edam:operation_0300 . BIND(STRLEN(REPLACE(SUBSTR(?templateMotifCigarP07547MF_03143398, 1, (STRLEN(?templateMotifCigarP07547MF_03143398) - STRLEN(REPLACE(?templateMotifCigarP07547MF_03143398, CONCAT('^(?:-*[^-]){', STR(((179 - ?templateMotifSequenceMatchBeginPositionP07547399) + 1)), '}'), '')))), '[a-z]', '')) AS ?step1410) . BIND((STRLEN(SUBSTR(?targetMotifMatchCigarP07547MF_03143400, 1, (STRLEN(?targetMotifMatchCigarP07547MF_03143400) - STRLEN(REPLACE(?targetMotifMatchCigarP07547MF_03143400, CONCAT('^(?:[a-z]*(?:[A-Z]|-)){', STR(?step1410), '}'), ''))))) - STRLEN(REPLACE(SUBSTR(?targetMotifMatchCigarP07547MF_03143400, 1, (STRLEN(?targetMotifMatchCigarP07547MF_03143400) - STRLEN(REPLACE(?targetMotifMatchCigarP07547MF_03143400, CONCAT('^(?:[a-z]*(?:[A-Z]|-)){', STR(?step1410), '}'), '')))), '[^-]', ''))) AS ?step2411) . BIND(((?step2411 + ?targetMotifMatchRegionMatchBeginPositionMF_03143401) - 1) AS ?thisPositionOn98) . BIND(STRLEN(REPLACE(SUBSTR(?templateMotifCigarP07547MF_03143398, 1, (STRLEN(?templateMotifCigarP07547MF_03143398) - STRLEN(REPLACE(?templateMotifCigarP07547MF_03143398, CONCAT('^(?:-*[^-]){', STR(((182 - ?templateMotifSequenceMatchBeginPositionP07547399) + 1)), '}'), '')))), '[a-z]', '')) AS ?step1412) . BIND((STRLEN(SUBSTR(?targetMotifMatchCigarP07547MF_03143400, 1, (STRLEN(?targetMotifMatchCigarP07547MF_03143400) - STRLEN(REPLACE(?targetMotifMatchCigarP07547MF_03143400, CONCAT('^(?:[a-z]*(?:[A-Z]|-)){', STR(?step1412), '}'), ''))))) - STRLEN(REPLACE(SUBSTR(?targetMotifMatchCigarP07547MF_03143400, 1, (STRLEN(?targetMotifMatchCigarP07547MF_03143400) - STRLEN(REPLACE(?targetMotifMatchCigarP07547MF_03143400, CONCAT('^(?:[a-z]*(?:[A-Z]|-)){', STR(?step1412), '}'), '')))), '[^-]', ''))) AS ?step2413) . BIND(((?step2413 + ?targetMotifMatchRegionMatchBeginPositionMF_03143401) - 1) AS ?thisPositionOn99) . BIND(?this AS ?pfs1t414) . BIND(URI(CONCAT(STR(?thisSequence), '#position', STR(?thisPositionOn98))) AS ?pfsb95) . BIND(URI(CONCAT(STR(?thisSequence), '#position', STR(?thisPositionOn99))) AS ?pfse96) . FILTER (REGEX('[FYW][LI][ARNDCQEGHILKMFPSTWYVBZJUOX][TS]', SUBSTR(?thisSequenceValue, ?thisPositionOn98, (?thisPositionOn99 - ?thisPositionOn98)))) . BIND(URI(CONCAT(STR(?this), '#MF_03143a94')) AS ?annotation94) . BIND(?this AS ?pfs93) . } OPTIONAL { ?this up:sequence ?thisSequence . ?thisSequence rdf:value ?thisSequenceValue . ?templateMotifMatch419 faldo:location ?templateMotifSequenceMatchRegionP07547420 ; edam:is_output_of ?templateMotifSequenceProfileAlignmentOperationP07547422 ; rdf:type edam:data_0869 ; rdf:value ?templateMotifCigarP07547MF_03143415 . ?templateMotifSequenceMatchRegionP07547420 faldo:begin ?templateMotifSequenceMatchBeginP07547421 . ?templateMotifSequenceMatchBeginP07547421 faldo:position ?templateMotifSequenceMatchBeginPositionP07547416 ; faldo:reference isoform:P07547-1 . ?templateMotifSequenceProfileAlignmentOperationP07547422 edam:has_input signature:MF_03143 ; rdf:type edam:operation_0300 . ?targetMotifMatch423 faldo:location ?targetMotifMatchRegionMatch424 ; edam:is_output_of ?targetMotifSequenceAlignmentOperationMF_03143426 ; rdf:type edam:data_0869 ; rdf:value ?targetMotifMatchCigarP07547MF_03143417 . ?targetMotifMatchRegionMatch424 faldo:begin ?targetMotifMatchRegionMatchBeginMF_03143425 . ?targetMotifMatchRegionMatchBeginMF_03143425 faldo:position ?targetMotifMatchRegionMatchBeginPositionMF_03143418 ; faldo:reference ?thisSequence . ?targetMotifSequenceAlignmentOperationMF_03143426 edam:has_input signature:MF_03143 ; rdf:type edam:operation_0300 . BIND(STRLEN(REPLACE(SUBSTR(?templateMotifCigarP07547MF_03143415, 1, (STRLEN(?templateMotifCigarP07547MF_03143415) - STRLEN(REPLACE(?templateMotifCigarP07547MF_03143415, CONCAT('^(?:-*[^-]){', STR(((870 - ?templateMotifSequenceMatchBeginPositionP07547416) + 1)), '}'), '')))), '[a-z]', '')) AS ?step1427) . BIND((STRLEN(SUBSTR(?targetMotifMatchCigarP07547MF_03143417, 1, (STRLEN(?targetMotifMatchCigarP07547MF_03143417) - STRLEN(REPLACE(?targetMotifMatchCigarP07547MF_03143417, CONCAT('^(?:[a-z]*(?:[A-Z]|-)){', STR(?step1427), '}'), ''))))) - STRLEN(REPLACE(SUBSTR(?targetMotifMatchCigarP07547MF_03143417, 1, (STRLEN(?targetMotifMatchCigarP07547MF_03143417) - STRLEN(REPLACE(?targetMotifMatchCigarP07547MF_03143417, CONCAT('^(?:[a-z]*(?:[A-Z]|-)){', STR(?step1427), '}'), '')))), '[^-]', ''))) AS ?step2428) . BIND(((?step2428 + ?targetMotifMatchRegionMatchBeginPositionMF_03143418) - 1) AS ?thisPositionOn105) . BIND(STRLEN(REPLACE(SUBSTR(?templateMotifCigarP07547MF_03143415, 1, (STRLEN(?templateMotifCigarP07547MF_03143415) - STRLEN(REPLACE(?templateMotifCigarP07547MF_03143415, CONCAT('^(?:-*[^-]){', STR(((877 - ?templateMotifSequenceMatchBeginPositionP07547416) + 1)), '}'), '')))), '[a-z]', '')) AS ?step1429) . BIND((STRLEN(SUBSTR(?targetMotifMatchCigarP07547MF_03143417, 1, (STRLEN(?targetMotifMatchCigarP07547MF_03143417) - STRLEN(REPLACE(?targetMotifMatchCigarP07547MF_03143417, CONCAT('^(?:[a-z]*(?:[A-Z]|-)){', STR(?step1429), '}'), ''))))) - STRLEN(REPLACE(SUBSTR(?targetMotifMatchCigarP07547MF_03143417, 1, (STRLEN(?targetMotifMatchCigarP07547MF_03143417) - STRLEN(REPLACE(?targetMotifMatchCigarP07547MF_03143417, CONCAT('^(?:[a-z]*(?:[A-Z]|-)){', STR(?step1429), '}'), '')))), '[^-]', ''))) AS ?step2430) . BIND(((?step2430 + ?targetMotifMatchRegionMatchBeginPositionMF_03143418) - 1) AS ?thisPositionOn106) . BIND(?this AS ?pfs1t431) . BIND(URI(CONCAT(STR(?thisSequence), '#position', STR(?thisPositionOn105))) AS ?pfsb102) . BIND(URI(CONCAT(STR(?thisSequence), '#position', STR(?thisPositionOn106))) AS ?pfse103) . FILTER (REGEX('GMR[GA][AST]GK[ST]', SUBSTR(?thisSequenceValue, ?thisPositionOn105, (?thisPositionOn106 - ?thisPositionOn105)))) . BIND(URI(CONCAT(STR(?this), '#MF_03143a101')) AS ?annotation101) . BIND(?this AS ?pfs100) . } OPTIONAL { ?this up:sequence ?thisSequence . ?thisSequence rdf:value ?thisSequenceValue . ?templateMotifMatch436 faldo:location ?templateMotifSequenceMatchRegionP07547437 ; edam:is_output_of ?templateMotifSequenceProfileAlignmentOperationP07547439 ; rdf:type edam:data_0869 ; rdf:value ?templateMotifCigarP07547MF_03143432 . ?templateMotifSequenceMatchRegionP07547437 faldo:begin ?templateMotifSequenceMatchBeginP07547438 . ?templateMotifSequenceMatchBeginP07547438 faldo:position ?templateMotifSequenceMatchBeginPositionP07547433 ; faldo:reference isoform:P07547-1 . ?templateMotifSequenceProfileAlignmentOperationP07547439 edam:has_input signature:MF_03143 ; rdf:type edam:operation_0300 . ?targetMotifMatch440 faldo:location ?targetMotifMatchRegionMatch441 ; edam:is_output_of ?targetMotifSequenceAlignmentOperationMF_03143443 ; rdf:type edam:data_0869 ; rdf:value ?targetMotifMatchCigarP07547MF_03143434 . ?targetMotifMatchRegionMatch441 faldo:begin ?targetMotifMatchRegionMatchBeginMF_03143442 . ?targetMotifMatchRegionMatchBeginMF_03143442 faldo:position ?targetMotifMatchRegionMatchBeginPositionMF_03143435 ; faldo:reference ?thisSequence . ?targetMotifSequenceAlignmentOperationMF_03143443 edam:has_input signature:MF_03143 ; rdf:type edam:operation_0300 . BIND(STRLEN(REPLACE(SUBSTR(?templateMotifCigarP07547MF_03143432, 1, (STRLEN(?templateMotifCigarP07547MF_03143432) - STRLEN(REPLACE(?templateMotifCigarP07547MF_03143432, CONCAT('^(?:-*[^-]){', STR(((194 - ?templateMotifSequenceMatchBeginPositionP07547433) + 1)), '}'), '')))), '[a-z]', '')) AS ?step1444) . BIND((STRLEN(SUBSTR(?targetMotifMatchCigarP07547MF_03143434, 1, (STRLEN(?targetMotifMatchCigarP07547MF_03143434) - STRLEN(REPLACE(?targetMotifMatchCigarP07547MF_03143434, CONCAT('^(?:[a-z]*(?:[A-Z]|-)){', STR(?step1444), '}'), ''))))) - STRLEN(REPLACE(SUBSTR(?targetMotifMatchCigarP07547MF_03143434, 1, (STRLEN(?targetMotifMatchCigarP07547MF_03143434) - STRLEN(REPLACE(?targetMotifMatchCigarP07547MF_03143434, CONCAT('^(?:[a-z]*(?:[A-Z]|-)){', STR(?step1444), '}'), '')))), '[^-]', ''))) AS ?step2445) . BIND(((?step2445 + ?targetMotifMatchRegionMatchBeginPositionMF_03143435) - 1) AS ?thisPositionOn112) . BIND(STRLEN(REPLACE(SUBSTR(?templateMotifCigarP07547MF_03143432, 1, (STRLEN(?templateMotifCigarP07547MF_03143432) - STRLEN(REPLACE(?templateMotifCigarP07547MF_03143432, CONCAT('^(?:-*[^-]){', STR(((197 - ?templateMotifSequenceMatchBeginPositionP07547433) + 1)), '}'), '')))), '[a-z]', '')) AS ?step1446) . BIND((STRLEN(SUBSTR(?targetMotifMatchCigarP07547MF_03143434, 1, (STRLEN(?targetMotifMatchCigarP07547MF_03143434) - STRLEN(REPLACE(?targetMotifMatchCigarP07547MF_03143434, CONCAT('^(?:[a-z]*(?:[A-Z]|-)){', STR(?step1446), '}'), ''))))) - STRLEN(REPLACE(SUBSTR(?targetMotifMatchCigarP07547MF_03143434, 1, (STRLEN(?targetMotifMatchCigarP07547MF_03143434) - STRLEN(REPLACE(?targetMotifMatchCigarP07547MF_03143434, CONCAT('^(?:[a-z]*(?:[A-Z]|-)){', STR(?step1446), '}'), '')))), '[^-]', ''))) AS ?step2447) . BIND(((?step2447 + ?targetMotifMatchRegionMatchBeginPositionMF_03143435) - 1) AS ?thisPositionOn113) . BIND(?this AS ?pfs1t448) . BIND(URI(CONCAT(STR(?thisSequence), '#position', STR(?thisPositionOn112))) AS ?pfsb109) . BIND(URI(CONCAT(STR(?thisSequence), '#position', STR(?thisPositionOn113))) AS ?pfse110) . FILTER (REGEX('E[VIL][IV]K', SUBSTR(?thisSequenceValue, ?thisPositionOn112, (?thisPositionOn113 - ?thisPositionOn112)))) . BIND(URI(CONCAT(STR(?this), '#MF_03143a108')) AS ?annotation108) . BIND(?this AS ?pfs107) . } OPTIONAL { ?this up:sequence ?thisSequence . ?thisSequence rdf:value ?thisSequenceValue . ?templateMotifMatch453 faldo:location ?templateMotifSequenceMatchRegionP07547454 ; edam:is_output_of ?templateMotifSequenceProfileAlignmentOperationP07547456 ; rdf:type edam:data_0869 ; rdf:value ?templateMotifCigarP07547MF_03143449 . ?templateMotifSequenceMatchRegionP07547454 faldo:begin ?templateMotifSequenceMatchBeginP07547455 . ?templateMotifSequenceMatchBeginP07547455 faldo:position ?templateMotifSequenceMatchBeginPositionP07547450 ; faldo:reference isoform:P07547-1 . ?templateMotifSequenceProfileAlignmentOperationP07547456 edam:has_input signature:MF_03143 ; rdf:type edam:operation_0300 . ?targetMotifMatch457 faldo:location ?targetMotifMatchRegionMatch458 ; edam:is_output_of ?targetMotifSequenceAlignmentOperationMF_03143460 ; rdf:type edam:data_0869 ; rdf:value ?targetMotifMatchCigarP07547MF_03143451 . ?targetMotifMatchRegionMatch458 faldo:begin ?targetMotifMatchRegionMatchBeginMF_03143459 . ?targetMotifMatchRegionMatchBeginMF_03143459 faldo:position ?targetMotifMatchRegionMatchBeginPositionMF_03143452 ; faldo:reference ?thisSequence . ?targetMotifSequenceAlignmentOperationMF_03143460 edam:has_input signature:MF_03143 ; rdf:type edam:operation_0300 . BIND(STRLEN(REPLACE(SUBSTR(?templateMotifCigarP07547MF_03143449, 1, (STRLEN(?templateMotifCigarP07547MF_03143449) - STRLEN(REPLACE(?templateMotifCigarP07547MF_03143449, CONCAT('^(?:-*[^-]){', STR(((264 - ?templateMotifSequenceMatchBeginPositionP07547450) + 1)), '}'), '')))), '[a-z]', '')) AS ?step1461) . BIND((STRLEN(SUBSTR(?targetMotifMatchCigarP07547MF_03143451, 1, (STRLEN(?targetMotifMatchCigarP07547MF_03143451) - STRLEN(REPLACE(?targetMotifMatchCigarP07547MF_03143451, CONCAT('^(?:[a-z]*(?:[A-Z]|-)){', STR(?step1461), '}'), ''))))) - STRLEN(REPLACE(SUBSTR(?targetMotifMatchCigarP07547MF_03143451, 1, (STRLEN(?targetMotifMatchCigarP07547MF_03143451) - STRLEN(REPLACE(?targetMotifMatchCigarP07547MF_03143451, CONCAT('^(?:[a-z]*(?:[A-Z]|-)){', STR(?step1461), '}'), '')))), '[^-]', ''))) AS ?step2462) . BIND(((?step2462 + ?targetMotifMatchRegionMatchBeginPositionMF_03143452) - 1) AS ?thisPositionOn119) . BIND(STRLEN(REPLACE(SUBSTR(?templateMotifCigarP07547MF_03143449, 1, (STRLEN(?templateMotifCigarP07547MF_03143449) - STRLEN(REPLACE(?templateMotifCigarP07547MF_03143449, CONCAT('^(?:-*[^-]){', STR(((268 - ?templateMotifSequenceMatchBeginPositionP07547450) + 1)), '}'), '')))), '[a-z]', '')) AS ?step1463) . BIND((STRLEN(SUBSTR(?targetMotifMatchCigarP07547MF_03143451, 1, (STRLEN(?targetMotifMatchCigarP07547MF_03143451) - STRLEN(REPLACE(?targetMotifMatchCigarP07547MF_03143451, CONCAT('^(?:[a-z]*(?:[A-Z]|-)){', STR(?step1463), '}'), ''))))) - STRLEN(REPLACE(SUBSTR(?targetMotifMatchCigarP07547MF_03143451, 1, (STRLEN(?targetMotifMatchCigarP07547MF_03143451) - STRLEN(REPLACE(?targetMotifMatchCigarP07547MF_03143451, CONCAT('^(?:[a-z]*(?:[A-Z]|-)){', STR(?step1463), '}'), '')))), '[^-]', ''))) AS ?step2464) . BIND(((?step2464 + ?targetMotifMatchRegionMatchBeginPositionMF_03143452) - 1) AS ?thisPositionOn120) . BIND(?this AS ?pfs1t465) . BIND(URI(CONCAT(STR(?thisSequence), '#position', STR(?thisPositionOn119))) AS ?pfsb116) . BIND(URI(CONCAT(STR(?thisSequence), '#position', STR(?thisPositionOn120))) AS ?pfse117) . FILTER (REGEX('R[NT][LI][LV]N', SUBSTR(?thisSequenceValue, ?thisPositionOn119, (?thisPositionOn120 - ?thisPositionOn119)))) . BIND(URI(CONCAT(STR(?this), '#MF_03143a115')) AS ?annotation115) . BIND(?this AS ?pfs114) . } OPTIONAL { ?this up:sequence ?thisSequence . ?thisSequence rdf:value ?thisSequenceValue . ?templateMotifMatch470 faldo:location ?templateMotifSequenceMatchRegionP07547471 ; edam:is_output_of ?templateMotifSequenceProfileAlignmentOperationP07547473 ; rdf:type edam:data_0869 ; rdf:value ?templateMotifCigarP07547MF_03143466 . ?templateMotifSequenceMatchRegionP07547471 faldo:begin ?templateMotifSequenceMatchBeginP07547472 . ?templateMotifSequenceMatchBeginP07547472 faldo:position ?templateMotifSequenceMatchBeginPositionP07547467 ; faldo:reference isoform:P07547-1 . ?templateMotifSequenceProfileAlignmentOperationP07547473 edam:has_input signature:MF_03143 ; rdf:type edam:operation_0300 . ?targetMotifMatch474 faldo:location ?targetMotifMatchRegionMatch475 ; edam:is_output_of ?targetMotifSequenceAlignmentOperationMF_03143477 ; rdf:type edam:data_0869 ; rdf:value ?targetMotifMatchCigarP07547MF_03143468 . ?targetMotifMatchRegionMatch475 faldo:begin ?targetMotifMatchRegionMatchBeginMF_03143476 . ?targetMotifMatchRegionMatchBeginMF_03143476 faldo:position ?targetMotifMatchRegionMatchBeginPositionMF_03143469 ; faldo:reference ?thisSequence . ?targetMotifSequenceAlignmentOperationMF_03143477 edam:has_input signature:MF_03143 ; rdf:type edam:operation_0300 . BIND(STRLEN(REPLACE(SUBSTR(?templateMotifCigarP07547MF_03143466, 1, (STRLEN(?templateMotifCigarP07547MF_03143466) - STRLEN(REPLACE(?templateMotifCigarP07547MF_03143466, CONCAT('^(?:-*[^-]){', STR(((260 - ?templateMotifSequenceMatchBeginPositionP07547467) + 1)), '}'), '')))), '[a-z]', '')) AS ?step1478) . BIND((STRLEN(SUBSTR(?targetMotifMatchCigarP07547MF_03143468, 1, (STRLEN(?targetMotifMatchCigarP07547MF_03143468) - STRLEN(REPLACE(?targetMotifMatchCigarP07547MF_03143468, CONCAT('^(?:[a-z]*(?:[A-Z]|-)){', STR(?step1478), '}'), ''))))) - STRLEN(REPLACE(SUBSTR(?targetMotifMatchCigarP07547MF_03143468, 1, (STRLEN(?targetMotifMatchCigarP07547MF_03143468) - STRLEN(REPLACE(?targetMotifMatchCigarP07547MF_03143468, CONCAT('^(?:[a-z]*(?:[A-Z]|-)){', STR(?step1478), '}'), '')))), '[^-]', ''))) AS ?step2479) . BIND(((?step2479 + ?targetMotifMatchRegionMatchBeginPositionMF_03143469) - 1) AS ?thisPositionOn125) . BIND(?thisPositionOn125 AS ?thisPositionOn126) . BIND(?this AS ?pfs1t480) . BIND(URI(CONCAT(STR(?thisSequence), '#position', STR(?thisPositionOn125))) AS ?pfsb123) . BIND(URI(CONCAT(STR(?thisSequence), '#position', STR(?thisPositionOn126))) AS ?pfse124) . FILTER ((SUBSTR(?thisSequenceValue, ?thisPositionOn125, 1) = 'E')) . BIND(URI(CONCAT(STR(?this), '#MF_03143a122')) AS ?annotation122) . BIND(?this AS ?pfs121) . } OPTIONAL { ?this up:sequence ?thisSequence . ?thisSequence rdf:value ?thisSequenceValue . ?templateMotifMatch485 faldo:location ?templateMotifSequenceMatchRegionP07547486 ; edam:is_output_of ?templateMotifSequenceProfileAlignmentOperationP07547488 ; rdf:type edam:data_0869 ; rdf:value ?templateMotifCigarP07547MF_03143481 . ?templateMotifSequenceMatchRegionP07547486 faldo:begin ?templateMotifSequenceMatchBeginP07547487 . ?templateMotifSequenceMatchBeginP07547487 faldo:position ?templateMotifSequenceMatchBeginPositionP07547482 ; faldo:reference isoform:P07547-1 . ?templateMotifSequenceProfileAlignmentOperationP07547488 edam:has_input signature:MF_03143 ; rdf:type edam:operation_0300 . ?targetMotifMatch489 faldo:location ?targetMotifMatchRegionMatch490 ; edam:is_output_of ?targetMotifSequenceAlignmentOperationMF_03143492 ; rdf:type edam:data_0869 ; rdf:value ?targetMotifMatchCigarP07547MF_03143483 . ?targetMotifMatchRegionMatch490 faldo:begin ?targetMotifMatchRegionMatchBeginMF_03143491 . ?targetMotifMatchRegionMatchBeginMF_03143491 faldo:position ?targetMotifMatchRegionMatchBeginPositionMF_03143484 ; faldo:reference ?thisSequence . ?targetMotifSequenceAlignmentOperationMF_03143492 edam:has_input signature:MF_03143 ; rdf:type edam:operation_0300 . BIND(STRLEN(REPLACE(SUBSTR(?templateMotifCigarP07547MF_03143481, 1, (STRLEN(?templateMotifCigarP07547MF_03143481) - STRLEN(REPLACE(?templateMotifCigarP07547MF_03143481, CONCAT('^(?:-*[^-]){', STR(((275 - ?templateMotifSequenceMatchBeginPositionP07547482) + 1)), '}'), '')))), '[a-z]', '')) AS ?step1493) . BIND((STRLEN(SUBSTR(?targetMotifMatchCigarP07547MF_03143483, 1, (STRLEN(?targetMotifMatchCigarP07547MF_03143483) - STRLEN(REPLACE(?targetMotifMatchCigarP07547MF_03143483, CONCAT('^(?:[a-z]*(?:[A-Z]|-)){', STR(?step1493), '}'), ''))))) - STRLEN(REPLACE(SUBSTR(?targetMotifMatchCigarP07547MF_03143483, 1, (STRLEN(?targetMotifMatchCigarP07547MF_03143483) - STRLEN(REPLACE(?targetMotifMatchCigarP07547MF_03143483, CONCAT('^(?:[a-z]*(?:[A-Z]|-)){', STR(?step1493), '}'), '')))), '[^-]', ''))) AS ?step2494) . BIND(((?step2494 + ?targetMotifMatchRegionMatchBeginPositionMF_03143484) - 1) AS ?thisPositionOn131) . BIND(?thisPositionOn131 AS ?thisPositionOn132) . BIND(?this AS ?pfs1t495) . BIND(URI(CONCAT(STR(?thisSequence), '#position', STR(?thisPositionOn131))) AS ?pfsb129) . BIND(URI(CONCAT(STR(?thisSequence), '#position', STR(?thisPositionOn132))) AS ?pfse130) . FILTER ((SUBSTR(?thisSequenceValue, ?thisPositionOn131, 1) = 'H')) . BIND(URI(CONCAT(STR(?this), '#MF_03143a128')) AS ?annotation128) . BIND(?this AS ?pfs127) . } OPTIONAL { ?this up:sequence ?thisSequence . ?thisSequence rdf:value ?thisSequenceValue . ?templateMotifMatch500 faldo:location ?templateMotifSequenceMatchRegionP07547501 ; edam:is_output_of ?templateMotifSequenceProfileAlignmentOperationP07547503 ; rdf:type edam:data_0869 ; rdf:value ?templateMotifCigarP07547MF_03143496 . ?templateMotifSequenceMatchRegionP07547501 faldo:begin ?templateMotifSequenceMatchBeginP07547502 . ?templateMotifSequenceMatchBeginP07547502 faldo:position ?templateMotifSequenceMatchBeginPositionP07547497 ; faldo:reference isoform:P07547-1 . ?templateMotifSequenceProfileAlignmentOperationP07547503 edam:has_input signature:MF_03143 ; rdf:type edam:operation_0300 . ?targetMotifMatch504 faldo:location ?targetMotifMatchRegionMatch505 ; edam:is_output_of ?targetMotifSequenceAlignmentOperationMF_03143507 ; rdf:type edam:data_0869 ; rdf:value ?targetMotifMatchCigarP07547MF_03143498 . ?targetMotifMatchRegionMatch505 faldo:begin ?targetMotifMatchRegionMatchBeginMF_03143506 . ?targetMotifMatchRegionMatchBeginMF_03143506 faldo:position ?targetMotifMatchRegionMatchBeginPositionMF_03143499 ; faldo:reference ?thisSequence . ?targetMotifSequenceAlignmentOperationMF_03143507 edam:has_input signature:MF_03143 ; rdf:type edam:operation_0300 . BIND(STRLEN(REPLACE(SUBSTR(?templateMotifCigarP07547MF_03143496, 1, (STRLEN(?templateMotifCigarP07547MF_03143496) - STRLEN(REPLACE(?templateMotifCigarP07547MF_03143496, CONCAT('^(?:-*[^-]){', STR(((824 - ?templateMotifSequenceMatchBeginPositionP07547497) + 1)), '}'), '')))), '[a-z]', '')) AS ?step1508) . BIND((STRLEN(SUBSTR(?targetMotifMatchCigarP07547MF_03143498, 1, (STRLEN(?targetMotifMatchCigarP07547MF_03143498) - STRLEN(REPLACE(?targetMotifMatchCigarP07547MF_03143498, CONCAT('^(?:[a-z]*(?:[A-Z]|-)){', STR(?step1508), '}'), ''))))) - STRLEN(REPLACE(SUBSTR(?targetMotifMatchCigarP07547MF_03143498, 1, (STRLEN(?targetMotifMatchCigarP07547MF_03143498) - STRLEN(REPLACE(?targetMotifMatchCigarP07547MF_03143498, CONCAT('^(?:[a-z]*(?:[A-Z]|-)){', STR(?step1508), '}'), '')))), '[^-]', ''))) AS ?step2509) . BIND(((?step2509 + ?targetMotifMatchRegionMatchBeginPositionMF_03143499) - 1) AS ?thisPositionOn137) . BIND(?thisPositionOn137 AS ?thisPositionOn138) . BIND(?this AS ?pfs1t510) . BIND(URI(CONCAT(STR(?thisSequence), '#position', STR(?thisPositionOn137))) AS ?pfsb135) . BIND(URI(CONCAT(STR(?thisSequence), '#position', STR(?thisPositionOn138))) AS ?pfse136) . FILTER ((SUBSTR(?thisSequenceValue, ?thisPositionOn137, 1) = 'C')) . BIND(URI(CONCAT(STR(?this), '#MF_03143a134')) AS ?annotation134) . BIND(?this AS ?pfs133) . } OPTIONAL { ?this up:sequence ?thisSequence . ?thisSequence rdf:value ?thisSequenceValue . ?templateMotifMatch515 faldo:location ?templateMotifSequenceMatchRegionP07547516 ; edam:is_output_of ?templateMotifSequenceProfileAlignmentOperationP07547518 ; rdf:type edam:data_0869 ; rdf:value ?templateMotifCigarP07547MF_03143511 . ?templateMotifSequenceMatchRegionP07547516 faldo:begin ?templateMotifSequenceMatchBeginP07547517 . ?templateMotifSequenceMatchBeginP07547517 faldo:position ?templateMotifSequenceMatchBeginPositionP07547512 ; faldo:reference isoform:P07547-1 . ?templateMotifSequenceProfileAlignmentOperationP07547518 edam:has_input signature:MF_03143 ; rdf:type edam:operation_0300 . ?targetMotifMatch519 faldo:location ?targetMotifMatchRegionMatch520 ; edam:is_output_of ?targetMotifSequenceAlignmentOperationMF_03143522 ; rdf:type edam:data_0869 ; rdf:value ?targetMotifMatchCigarP07547MF_03143513 . ?targetMotifMatchRegionMatch520 faldo:begin ?targetMotifMatchRegionMatchBeginMF_03143521 . ?targetMotifMatchRegionMatchBeginMF_03143521 faldo:position ?targetMotifMatchRegionMatchBeginPositionMF_03143514 ; faldo:reference ?thisSequence . ?targetMotifSequenceAlignmentOperationMF_03143522 edam:has_input signature:MF_03143 ; rdf:type edam:operation_0300 . BIND(STRLEN(REPLACE(SUBSTR(?templateMotifCigarP07547MF_03143511, 1, (STRLEN(?templateMotifCigarP07547MF_03143511) - STRLEN(REPLACE(?templateMotifCigarP07547MF_03143511, CONCAT('^(?:-*[^-]){', STR(((1179 - ?templateMotifSequenceMatchBeginPositionP07547512) + 1)), '}'), '')))), '[a-z]', '')) AS ?step1523) . BIND((STRLEN(SUBSTR(?targetMotifMatchCigarP07547MF_03143513, 1, (STRLEN(?targetMotifMatchCigarP07547MF_03143513) - STRLEN(REPLACE(?targetMotifMatchCigarP07547MF_03143513, CONCAT('^(?:[a-z]*(?:[A-Z]|-)){', STR(?step1523), '}'), ''))))) - STRLEN(REPLACE(SUBSTR(?targetMotifMatchCigarP07547MF_03143513, 1, (STRLEN(?targetMotifMatchCigarP07547MF_03143513) - STRLEN(REPLACE(?targetMotifMatchCigarP07547MF_03143513, CONCAT('^(?:[a-z]*(?:[A-Z]|-)){', STR(?step1523), '}'), '')))), '[^-]', ''))) AS ?step2524) . BIND(((?step2524 + ?targetMotifMatchRegionMatchBeginPositionMF_03143514) - 1) AS ?thisPositionOn143) . BIND(?thisPositionOn143 AS ?thisPositionOn144) . BIND(?this AS ?pfs1t525) . BIND(URI(CONCAT(STR(?thisSequence), '#position', STR(?thisPositionOn143))) AS ?pfsb141) . BIND(URI(CONCAT(STR(?thisSequence), '#position', STR(?thisPositionOn144))) AS ?pfse142) . FILTER ((SUBSTR(?thisSequenceValue, ?thisPositionOn143, 1) = 'H')) . BIND(URI(CONCAT(STR(?this), '#MF_03143a140')) AS ?annotation140) . BIND(?this AS ?pfs139) . } OPTIONAL { ?this up:sequence ?thisSequence . ?thisSequence rdf:value ?thisSequenceValue . ?templateMotifMatch530 faldo:location ?templateMotifSequenceMatchRegionP07547531 ; edam:is_output_of ?templateMotifSequenceProfileAlignmentOperationP07547533 ; rdf:type edam:data_0869 ; rdf:value ?templateMotifCigarP07547MF_03143526 . ?templateMotifSequenceMatchRegionP07547531 faldo:begin ?templateMotifSequenceMatchBeginP07547532 . ?templateMotifSequenceMatchBeginP07547532 faldo:position ?templateMotifSequenceMatchBeginPositionP07547527 ; faldo:reference isoform:P07547-1 . ?templateMotifSequenceProfileAlignmentOperationP07547533 edam:has_input signature:MF_03143 ; rdf:type edam:operation_0300 . ?targetMotifMatch534 faldo:location ?targetMotifMatchRegionMatch535 ; edam:is_output_of ?targetMotifSequenceAlignmentOperationMF_03143537 ; rdf:type edam:data_0869 ; rdf:value ?targetMotifMatchCigarP07547MF_03143528 . ?targetMotifMatchRegionMatch535 faldo:begin ?targetMotifMatchRegionMatchBeginMF_03143536 . ?targetMotifMatchRegionMatchBeginMF_03143536 faldo:position ?targetMotifMatchRegionMatchBeginPositionMF_03143529 ; faldo:reference ?thisSequence . ?targetMotifSequenceAlignmentOperationMF_03143537 edam:has_input signature:MF_03143 ; rdf:type edam:operation_0300 . BIND(STRLEN(REPLACE(SUBSTR(?templateMotifCigarP07547MF_03143526, 1, (STRLEN(?templateMotifCigarP07547MF_03143526) - STRLEN(REPLACE(?templateMotifCigarP07547MF_03143526, CONCAT('^(?:-*[^-]){', STR(((1207 - ?templateMotifSequenceMatchBeginPositionP07547527) + 1)), '}'), '')))), '[a-z]', '')) AS ?step1538) . BIND((STRLEN(SUBSTR(?targetMotifMatchCigarP07547MF_03143528, 1, (STRLEN(?targetMotifMatchCigarP07547MF_03143528) - STRLEN(REPLACE(?targetMotifMatchCigarP07547MF_03143528, CONCAT('^(?:[a-z]*(?:[A-Z]|-)){', STR(?step1538), '}'), ''))))) - STRLEN(REPLACE(SUBSTR(?targetMotifMatchCigarP07547MF_03143528, 1, (STRLEN(?targetMotifMatchCigarP07547MF_03143528) - STRLEN(REPLACE(?targetMotifMatchCigarP07547MF_03143528, CONCAT('^(?:[a-z]*(?:[A-Z]|-)){', STR(?step1538), '}'), '')))), '[^-]', ''))) AS ?step2539) . BIND(((?step2539 + ?targetMotifMatchRegionMatchBeginPositionMF_03143529) - 1) AS ?thisPositionOn149) . BIND(?thisPositionOn149 AS ?thisPositionOn150) . BIND(?this AS ?pfs1t540) . BIND(URI(CONCAT(STR(?thisSequence), '#position', STR(?thisPositionOn149))) AS ?pfsb147) . BIND(URI(CONCAT(STR(?thisSequence), '#position', STR(?thisPositionOn150))) AS ?pfse148) . FILTER (REGEX('[KR]', SUBSTR(?thisSequenceValue, ?thisPositionOn149, 1))) . BIND(URI(CONCAT(STR(?this), '#MF_03143a146')) AS ?annotation146) . BIND(?this AS ?pfs145) . } OPTIONAL { ?this up:sequence ?thisSequence . ?thisSequence rdf:value ?thisSequenceValue . ?templateMotifMatch545 faldo:location ?templateMotifSequenceMatchRegionP07547546 ; edam:is_output_of ?templateMotifSequenceProfileAlignmentOperationP07547548 ; rdf:type edam:data_0869 ; rdf:value ?templateMotifCigarP07547MF_03143541 . ?templateMotifSequenceMatchRegionP07547546 faldo:begin ?templateMotifSequenceMatchBeginP07547547 . ?templateMotifSequenceMatchBeginP07547547 faldo:position ?templateMotifSequenceMatchBeginPositionP07547542 ; faldo:reference isoform:P07547-1 . ?templateMotifSequenceProfileAlignmentOperationP07547548 edam:has_input signature:MF_03143 ; rdf:type edam:operation_0300 . ?targetMotifMatch549 faldo:location ?targetMotifMatchRegionMatch550 ; edam:is_output_of ?targetMotifSequenceAlignmentOperationMF_03143552 ; rdf:type edam:data_0869 ; rdf:value ?targetMotifMatchCigarP07547MF_03143543 . ?targetMotifMatchRegionMatch550 faldo:begin ?targetMotifMatchRegionMatchBeginMF_03143551 . ?targetMotifMatchRegionMatchBeginMF_03143551 faldo:position ?targetMotifMatchRegionMatchBeginPositionMF_03143544 ; faldo:reference ?thisSequence . ?targetMotifSequenceAlignmentOperationMF_03143552 edam:has_input signature:MF_03143 ; rdf:type edam:operation_0300 . BIND(STRLEN(REPLACE(SUBSTR(?templateMotifCigarP07547MF_03143541, 1, (STRLEN(?templateMotifCigarP07547MF_03143541) - STRLEN(REPLACE(?templateMotifCigarP07547MF_03143541, CONCAT('^(?:-*[^-]){', STR(((194 - ?templateMotifSequenceMatchBeginPositionP07547542) + 1)), '}'), '')))), '[a-z]', '')) AS ?step1553) . BIND((STRLEN(SUBSTR(?targetMotifMatchCigarP07547MF_03143543, 1, (STRLEN(?targetMotifMatchCigarP07547MF_03143543) - STRLEN(REPLACE(?targetMotifMatchCigarP07547MF_03143543, CONCAT('^(?:[a-z]*(?:[A-Z]|-)){', STR(?step1553), '}'), ''))))) - STRLEN(REPLACE(SUBSTR(?targetMotifMatchCigarP07547MF_03143543, 1, (STRLEN(?targetMotifMatchCigarP07547MF_03143543) - STRLEN(REPLACE(?targetMotifMatchCigarP07547MF_03143543, CONCAT('^(?:[a-z]*(?:[A-Z]|-)){', STR(?step1553), '}'), '')))), '[^-]', ''))) AS ?step2554) . BIND(((?step2554 + ?targetMotifMatchRegionMatchBeginPositionMF_03143544) - 1) AS ?thisPositionOn156) . BIND(?thisPositionOn156 AS ?thisPositionOn157) . BIND(?this AS ?pfs1t555) . BIND(URI(CONCAT(STR(?thisSequence), '#position', STR(?thisPositionOn156))) AS ?pfsb153) . BIND(URI(CONCAT(STR(?thisSequence), '#position', STR(?thisPositionOn157))) AS ?pfse154) . FILTER ((SUBSTR(?thisSequenceValue, ?thisPositionOn156, 1) = 'E')) . BIND(URI(CONCAT(STR(?this), '#MF_03143a152')) AS ?annotation152) . BIND(?this AS ?pfs151) . } OPTIONAL { ?this up:sequence ?thisSequence . ?thisSequence rdf:value ?thisSequenceValue . ?templateMotifMatch560 faldo:location ?templateMotifSequenceMatchRegionP07547561 ; edam:is_output_of ?templateMotifSequenceProfileAlignmentOperationP07547563 ; rdf:type edam:data_0869 ; rdf:value ?templateMotifCigarP07547MF_03143556 . ?templateMotifSequenceMatchRegionP07547561 faldo:begin ?templateMotifSequenceMatchBeginP07547562 . ?templateMotifSequenceMatchBeginP07547562 faldo:position ?templateMotifSequenceMatchBeginPositionP07547557 ; faldo:reference isoform:P07547-1 . ?templateMotifSequenceProfileAlignmentOperationP07547563 edam:has_input signature:MF_03143 ; rdf:type edam:operation_0300 . ?targetMotifMatch564 faldo:location ?targetMotifMatchRegionMatch565 ; edam:is_output_of ?targetMotifSequenceAlignmentOperationMF_03143567 ; rdf:type edam:data_0869 ; rdf:value ?targetMotifMatchCigarP07547MF_03143558 . ?targetMotifMatchRegionMatch565 faldo:begin ?targetMotifMatchRegionMatchBeginMF_03143566 . ?targetMotifMatchRegionMatchBeginMF_03143566 faldo:position ?targetMotifMatchRegionMatchBeginPositionMF_03143559 ; faldo:reference ?thisSequence . ?targetMotifSequenceAlignmentOperationMF_03143567 edam:has_input signature:MF_03143 ; rdf:type edam:operation_0300 . BIND(STRLEN(REPLACE(SUBSTR(?templateMotifCigarP07547MF_03143556, 1, (STRLEN(?templateMotifCigarP07547MF_03143556) - STRLEN(REPLACE(?templateMotifCigarP07547MF_03143556, CONCAT('^(?:-*[^-]){', STR(((271 - ?templateMotifSequenceMatchBeginPositionP07547557) + 1)), '}'), '')))), '[a-z]', '')) AS ?step1568) . BIND((STRLEN(SUBSTR(?targetMotifMatchCigarP07547MF_03143558, 1, (STRLEN(?targetMotifMatchCigarP07547MF_03143558) - STRLEN(REPLACE(?targetMotifMatchCigarP07547MF_03143558, CONCAT('^(?:[a-z]*(?:[A-Z]|-)){', STR(?step1568), '}'), ''))))) - STRLEN(REPLACE(SUBSTR(?targetMotifMatchCigarP07547MF_03143558, 1, (STRLEN(?targetMotifMatchCigarP07547MF_03143558) - STRLEN(REPLACE(?targetMotifMatchCigarP07547MF_03143558, CONCAT('^(?:[a-z]*(?:[A-Z]|-)){', STR(?step1568), '}'), '')))), '[^-]', ''))) AS ?step2569) . BIND(((?step2569 + ?targetMotifMatchRegionMatchBeginPositionMF_03143559) - 1) AS ?thisPositionOn163) . BIND(?thisPositionOn163 AS ?thisPositionOn164) . BIND(?this AS ?pfs1t570) . BIND(URI(CONCAT(STR(?thisSequence), '#position', STR(?thisPositionOn163))) AS ?pfsb160) . BIND(URI(CONCAT(STR(?thisSequence), '#position', STR(?thisPositionOn164))) AS ?pfse161) . FILTER ((SUBSTR(?thisSequenceValue, ?thisPositionOn163, 1) = 'H')) . BIND(URI(CONCAT(STR(?this), '#MF_03143a159')) AS ?annotation159) . BIND(?this AS ?pfs158) . } OPTIONAL { ?this up:sequence ?thisSequence . ?thisSequence rdf:value ?thisSequenceValue . ?templateMotifMatch575 faldo:location ?templateMotifSequenceMatchRegionP07547576 ; edam:is_output_of ?templateMotifSequenceProfileAlignmentOperationP07547578 ; rdf:type edam:data_0869 ; rdf:value ?templateMotifCigarP07547MF_03143571 . ?templateMotifSequenceMatchRegionP07547576 faldo:begin ?templateMotifSequenceMatchBeginP07547577 . ?templateMotifSequenceMatchBeginP07547577 faldo:position ?templateMotifSequenceMatchBeginPositionP07547572 ; faldo:reference isoform:P07547-1 . ?templateMotifSequenceProfileAlignmentOperationP07547578 edam:has_input signature:MF_03143 ; rdf:type edam:operation_0300 . ?targetMotifMatch579 faldo:location ?targetMotifMatchRegionMatch580 ; edam:is_output_of ?targetMotifSequenceAlignmentOperationMF_03143582 ; rdf:type edam:data_0869 ; rdf:value ?targetMotifMatchCigarP07547MF_03143573 . ?targetMotifMatchRegionMatch580 faldo:begin ?targetMotifMatchRegionMatchBeginMF_03143581 . ?targetMotifMatchRegionMatchBeginMF_03143581 faldo:position ?targetMotifMatchRegionMatchBeginPositionMF_03143574 ; faldo:reference ?thisSequence . ?targetMotifSequenceAlignmentOperationMF_03143582 edam:has_input signature:MF_03143 ; rdf:type edam:operation_0300 . BIND(STRLEN(REPLACE(SUBSTR(?templateMotifCigarP07547MF_03143571, 1, (STRLEN(?templateMotifCigarP07547MF_03143571) - STRLEN(REPLACE(?templateMotifCigarP07547MF_03143571, CONCAT('^(?:-*[^-]){', STR(((287 - ?templateMotifSequenceMatchBeginPositionP07547572) + 1)), '}'), '')))), '[a-z]', '')) AS ?step1583) . BIND((STRLEN(SUBSTR(?targetMotifMatchCigarP07547MF_03143573, 1, (STRLEN(?targetMotifMatchCigarP07547MF_03143573) - STRLEN(REPLACE(?targetMotifMatchCigarP07547MF_03143573, CONCAT('^(?:[a-z]*(?:[A-Z]|-)){', STR(?step1583), '}'), ''))))) - STRLEN(REPLACE(SUBSTR(?targetMotifMatchCigarP07547MF_03143573, 1, (STRLEN(?targetMotifMatchCigarP07547MF_03143573) - STRLEN(REPLACE(?targetMotifMatchCigarP07547MF_03143573, CONCAT('^(?:[a-z]*(?:[A-Z]|-)){', STR(?step1583), '}'), '')))), '[^-]', ''))) AS ?step2584) . BIND(((?step2584 + ?targetMotifMatchRegionMatchBeginPositionMF_03143574) - 1) AS ?thisPositionOn170) . BIND(?thisPositionOn170 AS ?thisPositionOn171) . BIND(?this AS ?pfs1t585) . BIND(URI(CONCAT(STR(?thisSequence), '#position', STR(?thisPositionOn170))) AS ?pfsb167) . BIND(URI(CONCAT(STR(?thisSequence), '#position', STR(?thisPositionOn171))) AS ?pfse168) . FILTER ((SUBSTR(?thisSequenceValue, ?thisPositionOn170, 1) = 'H')) . BIND(URI(CONCAT(STR(?this), '#MF_03143a166')) AS ?annotation166) . BIND(?this AS ?pfs165) . } OPTIONAL { ?this up:sequence ?thisSequence . ?thisSequence rdf:value ?thisSequenceValue . ?templateMotifMatch590 faldo:location ?templateMotifSequenceMatchRegionP07547591 ; edam:is_output_of ?templateMotifSequenceProfileAlignmentOperationP07547593 ; rdf:type edam:data_0869 ; rdf:value ?templateMotifCigarP07547MF_03143586 . ?templateMotifSequenceMatchRegionP07547591 faldo:begin ?templateMotifSequenceMatchBeginP07547592 . ?templateMotifSequenceMatchBeginP07547592 faldo:position ?templateMotifSequenceMatchBeginPositionP07547587 ; faldo:reference isoform:P07547-1 . ?templateMotifSequenceProfileAlignmentOperationP07547593 edam:has_input signature:MF_03143 ; rdf:type edam:operation_0300 . ?targetMotifMatch594 faldo:location ?targetMotifMatchRegionMatch595 ; edam:is_output_of ?targetMotifSequenceAlignmentOperationMF_03143597 ; rdf:type edam:data_0869 ; rdf:value ?targetMotifMatchCigarP07547MF_03143588 . ?targetMotifMatchRegionMatch595 faldo:begin ?targetMotifMatchRegionMatchBeginMF_03143596 . ?targetMotifMatchRegionMatchBeginMF_03143596 faldo:position ?targetMotifMatchRegionMatchBeginPositionMF_03143589 ; faldo:reference ?thisSequence . ?targetMotifSequenceAlignmentOperationMF_03143597 edam:has_input signature:MF_03143 ; rdf:type edam:operation_0300 . BIND(STRLEN(REPLACE(SUBSTR(?templateMotifCigarP07547MF_03143586, 1, (STRLEN(?templateMotifCigarP07547MF_03143586) - STRLEN(REPLACE(?templateMotifCigarP07547MF_03143586, CONCAT('^(?:-*[^-]){', STR(((119 - ?templateMotifSequenceMatchBeginPositionP07547587) + 1)), '}'), '')))), '[a-z]', '')) AS ?step1598) . BIND((STRLEN(SUBSTR(?targetMotifMatchCigarP07547MF_03143588, 1, (STRLEN(?targetMotifMatchCigarP07547MF_03143588) - STRLEN(REPLACE(?targetMotifMatchCigarP07547MF_03143588, CONCAT('^(?:[a-z]*(?:[A-Z]|-)){', STR(?step1598), '}'), ''))))) - STRLEN(REPLACE(SUBSTR(?targetMotifMatchCigarP07547MF_03143588, 1, (STRLEN(?targetMotifMatchCigarP07547MF_03143588) - STRLEN(REPLACE(?targetMotifMatchCigarP07547MF_03143588, CONCAT('^(?:[a-z]*(?:[A-Z]|-)){', STR(?step1598), '}'), '')))), '[^-]', ''))) AS ?step2599) . BIND(((?step2599 + ?targetMotifMatchRegionMatchBeginPositionMF_03143589) - 1) AS ?thisPositionOn177) . BIND(?thisPositionOn177 AS ?thisPositionOn178) . BIND(?this AS ?pfs1t600) . BIND(URI(CONCAT(STR(?thisSequence), '#position', STR(?thisPositionOn177))) AS ?pfsb174) . BIND(URI(CONCAT(STR(?thisSequence), '#position', STR(?thisPositionOn178))) AS ?pfse175) . FILTER ((SUBSTR(?thisSequenceValue, ?thisPositionOn177, 1) = 'D')) . BIND(URI(CONCAT(STR(?this), '#MF_03143a173')) AS ?annotation173) . BIND(?this AS ?pfs172) . } OPTIONAL { ?this up:sequence ?thisSequence . ?thisSequence rdf:value ?thisSequenceValue . ?templateMotifMatch605 faldo:location ?templateMotifSequenceMatchRegionP07547606 ; edam:is_output_of ?templateMotifSequenceProfileAlignmentOperationP07547608 ; rdf:type edam:data_0869 ; rdf:value ?templateMotifCigarP07547MF_03143601 . ?templateMotifSequenceMatchRegionP07547606 faldo:begin ?templateMotifSequenceMatchBeginP07547607 . ?templateMotifSequenceMatchBeginP07547607 faldo:position ?templateMotifSequenceMatchBeginPositionP07547602 ; faldo:reference isoform:P07547-1 . ?templateMotifSequenceProfileAlignmentOperationP07547608 edam:has_input signature:MF_03143 ; rdf:type edam:operation_0300 . ?targetMotifMatch609 faldo:location ?targetMotifMatchRegionMatch610 ; edam:is_output_of ?targetMotifSequenceAlignmentOperationMF_03143612 ; rdf:type edam:data_0869 ; rdf:value ?targetMotifMatchCigarP07547MF_03143603 . ?targetMotifMatchRegionMatch610 faldo:begin ?targetMotifMatchRegionMatchBeginMF_03143611 . ?targetMotifMatchRegionMatchBeginMF_03143611 faldo:position ?targetMotifMatchRegionMatchBeginPositionMF_03143604 ; faldo:reference ?thisSequence . ?targetMotifSequenceAlignmentOperationMF_03143612 edam:has_input signature:MF_03143 ; rdf:type edam:operation_0300 . BIND(STRLEN(REPLACE(SUBSTR(?templateMotifCigarP07547MF_03143601, 1, (STRLEN(?templateMotifCigarP07547MF_03143601) - STRLEN(REPLACE(?templateMotifCigarP07547MF_03143601, CONCAT('^(?:-*[^-]){', STR(((130 - ?templateMotifSequenceMatchBeginPositionP07547602) + 1)), '}'), '')))), '[a-z]', '')) AS ?step1613) . BIND((STRLEN(SUBSTR(?targetMotifMatchCigarP07547MF_03143603, 1, (STRLEN(?targetMotifMatchCigarP07547MF_03143603) - STRLEN(REPLACE(?targetMotifMatchCigarP07547MF_03143603, CONCAT('^(?:[a-z]*(?:[A-Z]|-)){', STR(?step1613), '}'), ''))))) - STRLEN(REPLACE(SUBSTR(?targetMotifMatchCigarP07547MF_03143603, 1, (STRLEN(?targetMotifMatchCigarP07547MF_03143603) - STRLEN(REPLACE(?targetMotifMatchCigarP07547MF_03143603, CONCAT('^(?:[a-z]*(?:[A-Z]|-)){', STR(?step1613), '}'), '')))), '[^-]', ''))) AS ?step2614) . BIND(((?step2614 + ?targetMotifMatchRegionMatchBeginPositionMF_03143604) - 1) AS ?thisPositionOn184) . BIND(?thisPositionOn184 AS ?thisPositionOn185) . BIND(?this AS ?pfs1t615) . BIND(URI(CONCAT(STR(?thisSequence), '#position', STR(?thisPositionOn184))) AS ?pfsb181) . BIND(URI(CONCAT(STR(?thisSequence), '#position', STR(?thisPositionOn185))) AS ?pfse182) . FILTER ((SUBSTR(?thisSequenceValue, ?thisPositionOn184, 1) = 'R')) . BIND(URI(CONCAT(STR(?this), '#MF_03143a180')) AS ?annotation180) . BIND(?this AS ?pfs179) . } OPTIONAL { ?this up:sequence ?thisSequence . ?thisSequence rdf:value ?thisSequenceValue . ?templateMotifMatch620 faldo:location ?templateMotifSequenceMatchRegionP07547621 ; edam:is_output_of ?templateMotifSequenceProfileAlignmentOperationP07547623 ; rdf:type edam:data_0869 ; rdf:value ?templateMotifCigarP07547MF_03143616 . ?templateMotifSequenceMatchRegionP07547621 faldo:begin ?templateMotifSequenceMatchBeginP07547622 . ?templateMotifSequenceMatchBeginP07547622 faldo:position ?templateMotifSequenceMatchBeginPositionP07547617 ; faldo:reference isoform:P07547-1 . ?templateMotifSequenceProfileAlignmentOperationP07547623 edam:has_input signature:MF_03143 ; rdf:type edam:operation_0300 . ?targetMotifMatch624 faldo:location ?targetMotifMatchRegionMatch625 ; edam:is_output_of ?targetMotifSequenceAlignmentOperationMF_03143627 ; rdf:type edam:data_0869 ; rdf:value ?targetMotifMatchCigarP07547MF_03143618 . ?targetMotifMatchRegionMatch625 faldo:begin ?targetMotifMatchRegionMatchBeginMF_03143626 . ?targetMotifMatchRegionMatchBeginMF_03143626 faldo:position ?targetMotifMatchRegionMatchBeginPositionMF_03143619 ; faldo:reference ?thisSequence . ?targetMotifSequenceAlignmentOperationMF_03143627 edam:has_input signature:MF_03143 ; rdf:type edam:operation_0300 . BIND(STRLEN(REPLACE(SUBSTR(?templateMotifCigarP07547MF_03143616, 1, (STRLEN(?templateMotifCigarP07547MF_03143616) - STRLEN(REPLACE(?templateMotifCigarP07547MF_03143616, CONCAT('^(?:-*[^-]){', STR(((146 - ?templateMotifSequenceMatchBeginPositionP07547617) + 1)), '}'), '')))), '[a-z]', '')) AS ?step1628) . BIND((STRLEN(SUBSTR(?targetMotifMatchCigarP07547MF_03143618, 1, (STRLEN(?targetMotifMatchCigarP07547MF_03143618) - STRLEN(REPLACE(?targetMotifMatchCigarP07547MF_03143618, CONCAT('^(?:[a-z]*(?:[A-Z]|-)){', STR(?step1628), '}'), ''))))) - STRLEN(REPLACE(SUBSTR(?targetMotifMatchCigarP07547MF_03143618, 1, (STRLEN(?targetMotifMatchCigarP07547MF_03143618) - STRLEN(REPLACE(?targetMotifMatchCigarP07547MF_03143618, CONCAT('^(?:[a-z]*(?:[A-Z]|-)){', STR(?step1628), '}'), '')))), '[^-]', ''))) AS ?step2629) . BIND(((?step2629 + ?targetMotifMatchRegionMatchBeginPositionMF_03143619) - 1) AS ?thisPositionOn191) . BIND(?thisPositionOn191 AS ?thisPositionOn192) . BIND(?this AS ?pfs1t630) . BIND(URI(CONCAT(STR(?thisSequence), '#position', STR(?thisPositionOn191))) AS ?pfsb188) . BIND(URI(CONCAT(STR(?thisSequence), '#position', STR(?thisPositionOn192))) AS ?pfse189) . FILTER ((SUBSTR(?thisSequenceValue, ?thisPositionOn191, 1) = 'D')) . BIND(URI(CONCAT(STR(?this), '#MF_03143a187')) AS ?annotation187) . BIND(?this AS ?pfs186) . } OPTIONAL { ?this up:sequence ?thisSequence . ?thisSequence rdf:value ?thisSequenceValue . ?templateMotifMatch635 faldo:location ?templateMotifSequenceMatchRegionP07547636 ; edam:is_output_of ?templateMotifSequenceProfileAlignmentOperationP07547638 ; rdf:type edam:data_0869 ; rdf:value ?templateMotifCigarP07547MF_03143631 . ?templateMotifSequenceMatchRegionP07547636 faldo:begin ?templateMotifSequenceMatchBeginP07547637 . ?templateMotifSequenceMatchBeginP07547637 faldo:position ?templateMotifSequenceMatchBeginPositionP07547632 ; faldo:reference isoform:P07547-1 . ?templateMotifSequenceProfileAlignmentOperationP07547638 edam:has_input signature:MF_03143 ; rdf:type edam:operation_0300 . ?targetMotifMatch639 faldo:location ?targetMotifMatchRegionMatch640 ; edam:is_output_of ?targetMotifSequenceAlignmentOperationMF_03143642 ; rdf:type edam:data_0869 ; rdf:value ?targetMotifMatchCigarP07547MF_03143633 . ?targetMotifMatchRegionMatch640 faldo:begin ?targetMotifMatchRegionMatchBeginMF_03143641 . ?targetMotifMatchRegionMatchBeginMF_03143641 faldo:position ?targetMotifMatchRegionMatchBeginPositionMF_03143634 ; faldo:reference ?thisSequence . ?targetMotifSequenceAlignmentOperationMF_03143642 edam:has_input signature:MF_03143 ; rdf:type edam:operation_0300 . BIND(STRLEN(REPLACE(SUBSTR(?templateMotifCigarP07547MF_03143631, 1, (STRLEN(?templateMotifCigarP07547MF_03143631) - STRLEN(REPLACE(?templateMotifCigarP07547MF_03143631, CONCAT('^(?:-*[^-]){', STR(((152 - ?templateMotifSequenceMatchBeginPositionP07547632) + 1)), '}'), '')))), '[a-z]', '')) AS ?step1643) . BIND((STRLEN(SUBSTR(?targetMotifMatchCigarP07547MF_03143633, 1, (STRLEN(?targetMotifMatchCigarP07547MF_03143633) - STRLEN(REPLACE(?targetMotifMatchCigarP07547MF_03143633, CONCAT('^(?:[a-z]*(?:[A-Z]|-)){', STR(?step1643), '}'), ''))))) - STRLEN(REPLACE(SUBSTR(?targetMotifMatchCigarP07547MF_03143633, 1, (STRLEN(?targetMotifMatchCigarP07547MF_03143633) - STRLEN(REPLACE(?targetMotifMatchCigarP07547MF_03143633, CONCAT('^(?:[a-z]*(?:[A-Z]|-)){', STR(?step1643), '}'), '')))), '[^-]', ''))) AS ?step2644) . BIND(((?step2644 + ?targetMotifMatchRegionMatchBeginPositionMF_03143634) - 1) AS ?thisPositionOn198) . BIND(?thisPositionOn198 AS ?thisPositionOn199) . BIND(?this AS ?pfs1t645) . BIND(URI(CONCAT(STR(?thisSequence), '#position', STR(?thisPositionOn198))) AS ?pfsb195) . BIND(URI(CONCAT(STR(?thisSequence), '#position', STR(?thisPositionOn199))) AS ?pfse196) . FILTER ((SUBSTR(?thisSequenceValue, ?thisPositionOn198, 1) = 'K')) . BIND(URI(CONCAT(STR(?this), '#MF_03143a194')) AS ?annotation194) . BIND(?this AS ?pfs193) . } OPTIONAL { ?this up:sequence ?thisSequence . ?thisSequence rdf:value ?thisSequenceValue . ?templateMotifMatch650 faldo:location ?templateMotifSequenceMatchRegionP07547651 ; edam:is_output_of ?templateMotifSequenceProfileAlignmentOperationP07547653 ; rdf:type edam:data_0869 ; rdf:value ?templateMotifCigarP07547MF_03143646 . ?templateMotifSequenceMatchRegionP07547651 faldo:begin ?templateMotifSequenceMatchBeginP07547652 . ?templateMotifSequenceMatchBeginP07547652 faldo:position ?templateMotifSequenceMatchBeginPositionP07547647 ; faldo:reference isoform:P07547-1 . ?templateMotifSequenceProfileAlignmentOperationP07547653 edam:has_input signature:MF_03143 ; rdf:type edam:operation_0300 . ?targetMotifMatch654 faldo:location ?targetMotifMatchRegionMatch655 ; edam:is_output_of ?targetMotifSequenceAlignmentOperationMF_03143657 ; rdf:type edam:data_0869 ; rdf:value ?targetMotifMatchCigarP07547MF_03143648 . ?targetMotifMatchRegionMatch655 faldo:begin ?targetMotifMatchRegionMatchBeginMF_03143656 . ?targetMotifMatchRegionMatchBeginMF_03143656 faldo:position ?targetMotifMatchRegionMatchBeginPositionMF_03143649 ; faldo:reference ?thisSequence . ?targetMotifSequenceAlignmentOperationMF_03143657 edam:has_input signature:MF_03143 ; rdf:type edam:operation_0300 . BIND(STRLEN(REPLACE(SUBSTR(?templateMotifCigarP07547MF_03143646, 1, (STRLEN(?templateMotifCigarP07547MF_03143646) - STRLEN(REPLACE(?templateMotifCigarP07547MF_03143646, CONCAT('^(?:-*[^-]){', STR(((161 - ?templateMotifSequenceMatchBeginPositionP07547647) + 1)), '}'), '')))), '[a-z]', '')) AS ?step1658) . BIND((STRLEN(SUBSTR(?targetMotifMatchCigarP07547MF_03143648, 1, (STRLEN(?targetMotifMatchCigarP07547MF_03143648) - STRLEN(REPLACE(?targetMotifMatchCigarP07547MF_03143648, CONCAT('^(?:[a-z]*(?:[A-Z]|-)){', STR(?step1658), '}'), ''))))) - STRLEN(REPLACE(SUBSTR(?targetMotifMatchCigarP07547MF_03143648, 1, (STRLEN(?targetMotifMatchCigarP07547MF_03143648) - STRLEN(REPLACE(?targetMotifMatchCigarP07547MF_03143648, CONCAT('^(?:[a-z]*(?:[A-Z]|-)){', STR(?step1658), '}'), '')))), '[^-]', ''))) AS ?step2659) . BIND(((?step2659 + ?targetMotifMatchRegionMatchBeginPositionMF_03143649) - 1) AS ?thisPositionOn205) . BIND(?thisPositionOn205 AS ?thisPositionOn206) . BIND(?this AS ?pfs1t660) . BIND(URI(CONCAT(STR(?thisSequence), '#position', STR(?thisPositionOn205))) AS ?pfsb202) . BIND(URI(CONCAT(STR(?thisSequence), '#position', STR(?thisPositionOn206))) AS ?pfse203) . FILTER ((SUBSTR(?thisSequenceValue, ?thisPositionOn205, 1) = 'K')) . BIND(URI(CONCAT(STR(?this), '#MF_03143a201')) AS ?annotation201) . BIND(?this AS ?pfs200) . } OPTIONAL { ?this up:sequence ?thisSequence . ?thisSequence rdf:value ?thisSequenceValue . ?templateMotifMatch665 faldo:location ?templateMotifSequenceMatchRegionP07547666 ; edam:is_output_of ?templateMotifSequenceProfileAlignmentOperationP07547668 ; rdf:type edam:data_0869 ; rdf:value ?templateMotifCigarP07547MF_03143661 . ?templateMotifSequenceMatchRegionP07547666 faldo:begin ?templateMotifSequenceMatchBeginP07547667 . ?templateMotifSequenceMatchBeginP07547667 faldo:position ?templateMotifSequenceMatchBeginPositionP07547662 ; faldo:reference isoform:P07547-1 . ?templateMotifSequenceProfileAlignmentOperationP07547668 edam:has_input signature:MF_03143 ; rdf:type edam:operation_0300 . ?targetMotifMatch669 faldo:location ?targetMotifMatchRegionMatch670 ; edam:is_output_of ?targetMotifSequenceAlignmentOperationMF_03143672 ; rdf:type edam:data_0869 ; rdf:value ?targetMotifMatchCigarP07547MF_03143663 . ?targetMotifMatchRegionMatch670 faldo:begin ?targetMotifMatchRegionMatchBeginMF_03143671 . ?targetMotifMatchRegionMatchBeginMF_03143671 faldo:position ?targetMotifMatchRegionMatchBeginPositionMF_03143664 ; faldo:reference ?thisSequence . ?targetMotifSequenceAlignmentOperationMF_03143672 edam:has_input signature:MF_03143 ; rdf:type edam:operation_0300 . BIND(STRLEN(REPLACE(SUBSTR(?templateMotifCigarP07547MF_03143661, 1, (STRLEN(?templateMotifCigarP07547MF_03143661) - STRLEN(REPLACE(?templateMotifCigarP07547MF_03143661, CONCAT('^(?:-*[^-]){', STR(((162 - ?templateMotifSequenceMatchBeginPositionP07547662) + 1)), '}'), '')))), '[a-z]', '')) AS ?step1673) . BIND((STRLEN(SUBSTR(?targetMotifMatchCigarP07547MF_03143663, 1, (STRLEN(?targetMotifMatchCigarP07547MF_03143663) - STRLEN(REPLACE(?targetMotifMatchCigarP07547MF_03143663, CONCAT('^(?:[a-z]*(?:[A-Z]|-)){', STR(?step1673), '}'), ''))))) - STRLEN(REPLACE(SUBSTR(?targetMotifMatchCigarP07547MF_03143663, 1, (STRLEN(?targetMotifMatchCigarP07547MF_03143663) - STRLEN(REPLACE(?targetMotifMatchCigarP07547MF_03143663, CONCAT('^(?:[a-z]*(?:[A-Z]|-)){', STR(?step1673), '}'), '')))), '[^-]', ''))) AS ?step2674) . BIND(((?step2674 + ?targetMotifMatchRegionMatchBeginPositionMF_03143664) - 1) AS ?thisPositionOn212) . BIND(?thisPositionOn212 AS ?thisPositionOn213) . BIND(?this AS ?pfs1t675) . BIND(URI(CONCAT(STR(?thisSequence), '#position', STR(?thisPositionOn212))) AS ?pfsb209) . BIND(URI(CONCAT(STR(?thisSequence), '#position', STR(?thisPositionOn213))) AS ?pfse210) . FILTER ((SUBSTR(?thisSequenceValue, ?thisPositionOn212, 1) = 'N')) . BIND(URI(CONCAT(STR(?this), '#MF_03143a208')) AS ?annotation208) . BIND(?this AS ?pfs207) . } OPTIONAL { ?this up:sequence ?thisSequence . ?thisSequence rdf:value ?thisSequenceValue . ?templateMotifMatch680 faldo:location ?templateMotifSequenceMatchRegionP07547681 ; edam:is_output_of ?templateMotifSequenceProfileAlignmentOperationP07547683 ; rdf:type edam:data_0869 ; rdf:value ?templateMotifCigarP07547MF_03143676 . ?templateMotifSequenceMatchRegionP07547681 faldo:begin ?templateMotifSequenceMatchBeginP07547682 . ?templateMotifSequenceMatchBeginP07547682 faldo:position ?templateMotifSequenceMatchBeginPositionP07547677 ; faldo:reference isoform:P07547-1 . ?templateMotifSequenceProfileAlignmentOperationP07547683 edam:has_input signature:MF_03143 ; rdf:type edam:operation_0300 . ?targetMotifMatch684 faldo:location ?targetMotifMatchRegionMatch685 ; edam:is_output_of ?targetMotifSequenceAlignmentOperationMF_03143687 ; rdf:type edam:data_0869 ; rdf:value ?targetMotifMatchCigarP07547MF_03143678 . ?targetMotifMatchRegionMatch685 faldo:begin ?targetMotifMatchRegionMatchBeginMF_03143686 . ?targetMotifMatchRegionMatchBeginMF_03143686 faldo:position ?targetMotifMatchRegionMatchBeginPositionMF_03143679 ; faldo:reference ?thisSequence . ?targetMotifSequenceAlignmentOperationMF_03143687 edam:has_input signature:MF_03143 ; rdf:type edam:operation_0300 . BIND(STRLEN(REPLACE(SUBSTR(?templateMotifCigarP07547MF_03143676, 1, (STRLEN(?templateMotifCigarP07547MF_03143676) - STRLEN(REPLACE(?templateMotifCigarP07547MF_03143676, CONCAT('^(?:-*[^-]){', STR(((190 - ?templateMotifSequenceMatchBeginPositionP07547677) + 1)), '}'), '')))), '[a-z]', '')) AS ?step1688) . BIND((STRLEN(SUBSTR(?targetMotifMatchCigarP07547MF_03143678, 1, (STRLEN(?targetMotifMatchCigarP07547MF_03143678) - STRLEN(REPLACE(?targetMotifMatchCigarP07547MF_03143678, CONCAT('^(?:[a-z]*(?:[A-Z]|-)){', STR(?step1688), '}'), ''))))) - STRLEN(REPLACE(SUBSTR(?targetMotifMatchCigarP07547MF_03143678, 1, (STRLEN(?targetMotifMatchCigarP07547MF_03143678) - STRLEN(REPLACE(?targetMotifMatchCigarP07547MF_03143678, CONCAT('^(?:[a-z]*(?:[A-Z]|-)){', STR(?step1688), '}'), '')))), '[^-]', ''))) AS ?step2689) . BIND(((?step2689 + ?targetMotifMatchRegionMatchBeginPositionMF_03143679) - 1) AS ?thisPositionOn219) . BIND(?thisPositionOn219 AS ?thisPositionOn220) . BIND(?this AS ?pfs1t690) . BIND(URI(CONCAT(STR(?thisSequence), '#position', STR(?thisPositionOn219))) AS ?pfsb216) . BIND(URI(CONCAT(STR(?thisSequence), '#position', STR(?thisPositionOn220))) AS ?pfse217) . FILTER ((SUBSTR(?thisSequenceValue, ?thisPositionOn219, 1) = 'N')) . BIND(URI(CONCAT(STR(?this), '#MF_03143a215')) AS ?annotation215) . BIND(?this AS ?pfs214) . } OPTIONAL { ?this up:sequence ?thisSequence . ?thisSequence rdf:value ?thisSequenceValue . ?templateMotifMatch695 faldo:location ?templateMotifSequenceMatchRegionP07547696 ; edam:is_output_of ?templateMotifSequenceProfileAlignmentOperationP07547698 ; rdf:type edam:data_0869 ; rdf:value ?templateMotifCigarP07547MF_03143691 . ?templateMotifSequenceMatchRegionP07547696 faldo:begin ?templateMotifSequenceMatchBeginP07547697 . ?templateMotifSequenceMatchBeginP07547697 faldo:position ?templateMotifSequenceMatchBeginPositionP07547692 ; faldo:reference isoform:P07547-1 . ?templateMotifSequenceProfileAlignmentOperationP07547698 edam:has_input signature:MF_03143 ; rdf:type edam:operation_0300 . ?targetMotifMatch699 faldo:location ?targetMotifMatchRegionMatch700 ; edam:is_output_of ?targetMotifSequenceAlignmentOperationMF_03143702 ; rdf:type edam:data_0869 ; rdf:value ?targetMotifMatchCigarP07547MF_03143693 . ?targetMotifMatchRegionMatch700 faldo:begin ?targetMotifMatchRegionMatchBeginMF_03143701 . ?targetMotifMatchRegionMatchBeginMF_03143701 faldo:position ?targetMotifMatchRegionMatchBeginPositionMF_03143694 ; faldo:reference ?thisSequence . ?targetMotifSequenceAlignmentOperationMF_03143702 edam:has_input signature:MF_03143 ; rdf:type edam:operation_0300 . BIND(STRLEN(REPLACE(SUBSTR(?templateMotifCigarP07547MF_03143691, 1, (STRLEN(?templateMotifCigarP07547MF_03143691) - STRLEN(REPLACE(?templateMotifCigarP07547MF_03143691, CONCAT('^(?:-*[^-]){', STR(((250 - ?templateMotifSequenceMatchBeginPositionP07547692) + 1)), '}'), '')))), '[a-z]', '')) AS ?step1703) . BIND((STRLEN(SUBSTR(?targetMotifMatchCigarP07547MF_03143693, 1, (STRLEN(?targetMotifMatchCigarP07547MF_03143693) - STRLEN(REPLACE(?targetMotifMatchCigarP07547MF_03143693, CONCAT('^(?:[a-z]*(?:[A-Z]|-)){', STR(?step1703), '}'), ''))))) - STRLEN(REPLACE(SUBSTR(?targetMotifMatchCigarP07547MF_03143693, 1, (STRLEN(?targetMotifMatchCigarP07547MF_03143693) - STRLEN(REPLACE(?targetMotifMatchCigarP07547MF_03143693, CONCAT('^(?:[a-z]*(?:[A-Z]|-)){', STR(?step1703), '}'), '')))), '[^-]', ''))) AS ?step2704) . BIND(((?step2704 + ?targetMotifMatchRegionMatchBeginPositionMF_03143694) - 1) AS ?thisPositionOn226) . BIND(?thisPositionOn226 AS ?thisPositionOn227) . BIND(?this AS ?pfs1t705) . BIND(URI(CONCAT(STR(?thisSequence), '#position', STR(?thisPositionOn226))) AS ?pfsb223) . BIND(URI(CONCAT(STR(?thisSequence), '#position', STR(?thisPositionOn227))) AS ?pfse224) . FILTER ((SUBSTR(?thisSequenceValue, ?thisPositionOn226, 1) = 'K')) . BIND(URI(CONCAT(STR(?this), '#MF_03143a222')) AS ?annotation222) . BIND(?this AS ?pfs221) . } OPTIONAL { ?this up:sequence ?thisSequence . ?thisSequence rdf:value ?thisSequenceValue . ?templateMotifMatch710 faldo:location ?templateMotifSequenceMatchRegionP07547711 ; edam:is_output_of ?templateMotifSequenceProfileAlignmentOperationP07547713 ; rdf:type edam:data_0869 ; rdf:value ?templateMotifCigarP07547MF_03143706 . ?templateMotifSequenceMatchRegionP07547711 faldo:begin ?templateMotifSequenceMatchBeginP07547712 . ?templateMotifSequenceMatchBeginP07547712 faldo:position ?templateMotifSequenceMatchBeginPositionP07547707 ; faldo:reference isoform:P07547-1 . ?templateMotifSequenceProfileAlignmentOperationP07547713 edam:has_input signature:MF_03143 ; rdf:type edam:operation_0300 . ?targetMotifMatch714 faldo:location ?targetMotifMatchRegionMatch715 ; edam:is_output_of ?targetMotifSequenceAlignmentOperationMF_03143717 ; rdf:type edam:data_0869 ; rdf:value ?targetMotifMatchCigarP07547MF_03143708 . ?targetMotifMatchRegionMatch715 faldo:begin ?targetMotifMatchRegionMatchBeginMF_03143716 . ?targetMotifMatchRegionMatchBeginMF_03143716 faldo:position ?targetMotifMatchRegionMatchBeginPositionMF_03143709 ; faldo:reference ?thisSequence . ?targetMotifSequenceAlignmentOperationMF_03143717 edam:has_input signature:MF_03143 ; rdf:type edam:operation_0300 . BIND(STRLEN(REPLACE(SUBSTR(?templateMotifCigarP07547MF_03143706, 1, (STRLEN(?templateMotifCigarP07547MF_03143706) - STRLEN(REPLACE(?templateMotifCigarP07547MF_03143706, CONCAT('^(?:-*[^-]){', STR(((271 - ?templateMotifSequenceMatchBeginPositionP07547707) + 1)), '}'), '')))), '[a-z]', '')) AS ?step1718) . BIND((STRLEN(SUBSTR(?targetMotifMatchCigarP07547MF_03143708, 1, (STRLEN(?targetMotifMatchCigarP07547MF_03143708) - STRLEN(REPLACE(?targetMotifMatchCigarP07547MF_03143708, CONCAT('^(?:[a-z]*(?:[A-Z]|-)){', STR(?step1718), '}'), ''))))) - STRLEN(REPLACE(SUBSTR(?targetMotifMatchCigarP07547MF_03143708, 1, (STRLEN(?targetMotifMatchCigarP07547MF_03143708) - STRLEN(REPLACE(?targetMotifMatchCigarP07547MF_03143708, CONCAT('^(?:[a-z]*(?:[A-Z]|-)){', STR(?step1718), '}'), '')))), '[^-]', ''))) AS ?step2719) . BIND(((?step2719 + ?targetMotifMatchRegionMatchBeginPositionMF_03143709) - 1) AS ?thisPositionOn233) . BIND(?thisPositionOn233 AS ?thisPositionOn234) . BIND(?this AS ?pfs1t720) . BIND(URI(CONCAT(STR(?thisSequence), '#position', STR(?thisPositionOn233))) AS ?pfsb230) . BIND(URI(CONCAT(STR(?thisSequence), '#position', STR(?thisPositionOn234))) AS ?pfse231) . FILTER ((SUBSTR(?thisSequenceValue, ?thisPositionOn233, 1) = 'H')) . BIND(URI(CONCAT(STR(?this), '#MF_03143a229')) AS ?annotation229) . BIND(?this AS ?pfs228) . } OPTIONAL { ?this up:sequence ?thisSequence . ?thisSequence rdf:value ?thisSequenceValue . ?templateMotifMatch725 faldo:location ?templateMotifSequenceMatchRegionP07547726 ; edam:is_output_of ?templateMotifSequenceProfileAlignmentOperationP07547728 ; rdf:type edam:data_0869 ; rdf:value ?templateMotifCigarP07547MF_03143721 . ?templateMotifSequenceMatchRegionP07547726 faldo:begin ?templateMotifSequenceMatchBeginP07547727 . ?templateMotifSequenceMatchBeginP07547727 faldo:position ?templateMotifSequenceMatchBeginPositionP07547722 ; faldo:reference isoform:P07547-1 . ?templateMotifSequenceProfileAlignmentOperationP07547728 edam:has_input signature:MF_03143 ; rdf:type edam:operation_0300 . ?targetMotifMatch729 faldo:location ?targetMotifMatchRegionMatch730 ; edam:is_output_of ?targetMotifSequenceAlignmentOperationMF_03143732 ; rdf:type edam:data_0869 ; rdf:value ?targetMotifMatchCigarP07547MF_03143723 . ?targetMotifMatchRegionMatch730 faldo:begin ?targetMotifMatchRegionMatchBeginMF_03143731 . ?targetMotifMatchRegionMatchBeginMF_03143731 faldo:position ?targetMotifMatchRegionMatchBeginPositionMF_03143724 ; faldo:reference ?thisSequence . ?targetMotifSequenceAlignmentOperationMF_03143732 edam:has_input signature:MF_03143 ; rdf:type edam:operation_0300 . BIND(STRLEN(REPLACE(SUBSTR(?templateMotifCigarP07547MF_03143721, 1, (STRLEN(?templateMotifCigarP07547MF_03143721) - STRLEN(REPLACE(?templateMotifCigarP07547MF_03143721, CONCAT('^(?:-*[^-]){', STR(((287 - ?templateMotifSequenceMatchBeginPositionP07547722) + 1)), '}'), '')))), '[a-z]', '')) AS ?step1733) . BIND((STRLEN(SUBSTR(?targetMotifMatchCigarP07547MF_03143723, 1, (STRLEN(?targetMotifMatchCigarP07547MF_03143723) - STRLEN(REPLACE(?targetMotifMatchCigarP07547MF_03143723, CONCAT('^(?:[a-z]*(?:[A-Z]|-)){', STR(?step1733), '}'), ''))))) - STRLEN(REPLACE(SUBSTR(?targetMotifMatchCigarP07547MF_03143723, 1, (STRLEN(?targetMotifMatchCigarP07547MF_03143723) - STRLEN(REPLACE(?targetMotifMatchCigarP07547MF_03143723, CONCAT('^(?:[a-z]*(?:[A-Z]|-)){', STR(?step1733), '}'), '')))), '[^-]', ''))) AS ?step2734) . BIND(((?step2734 + ?targetMotifMatchRegionMatchBeginPositionMF_03143724) - 1) AS ?thisPositionOn240) . BIND(?thisPositionOn240 AS ?thisPositionOn241) . BIND(?this AS ?pfs1t735) . BIND(URI(CONCAT(STR(?thisSequence), '#position', STR(?thisPositionOn240))) AS ?pfsb237) . BIND(URI(CONCAT(STR(?thisSequence), '#position', STR(?thisPositionOn241))) AS ?pfse238) . FILTER ((SUBSTR(?thisSequenceValue, ?thisPositionOn240, 1) = 'H')) . BIND(URI(CONCAT(STR(?this), '#MF_03143a236')) AS ?annotation236) . BIND(?this AS ?pfs235) . } OPTIONAL { ?this up:sequence ?thisSequence . ?thisSequence rdf:value ?thisSequenceValue . ?templateMotifMatch740 faldo:location ?templateMotifSequenceMatchRegionP07547741 ; edam:is_output_of ?templateMotifSequenceProfileAlignmentOperationP07547743 ; rdf:type edam:data_0869 ; rdf:value ?templateMotifCigarP07547MF_03143736 . ?templateMotifSequenceMatchRegionP07547741 faldo:begin ?templateMotifSequenceMatchBeginP07547742 . ?templateMotifSequenceMatchBeginP07547742 faldo:position ?templateMotifSequenceMatchBeginPositionP07547737 ; faldo:reference isoform:P07547-1 . ?templateMotifSequenceProfileAlignmentOperationP07547743 edam:has_input signature:MF_03143 ; rdf:type edam:operation_0300 . ?targetMotifMatch744 faldo:location ?targetMotifMatchRegionMatch745 ; edam:is_output_of ?targetMotifSequenceAlignmentOperationMF_03143747 ; rdf:type edam:data_0869 ; rdf:value ?targetMotifMatchCigarP07547MF_03143738 . ?targetMotifMatchRegionMatch745 faldo:begin ?targetMotifMatchRegionMatchBeginMF_03143746 . ?targetMotifMatchRegionMatchBeginMF_03143746 faldo:position ?targetMotifMatchRegionMatchBeginPositionMF_03143739 ; faldo:reference ?thisSequence . ?targetMotifSequenceAlignmentOperationMF_03143747 edam:has_input signature:MF_03143 ; rdf:type edam:operation_0300 . BIND(STRLEN(REPLACE(SUBSTR(?templateMotifCigarP07547MF_03143736, 1, (STRLEN(?templateMotifCigarP07547MF_03143736) - STRLEN(REPLACE(?templateMotifCigarP07547MF_03143736, CONCAT('^(?:-*[^-]){', STR(((356 - ?templateMotifSequenceMatchBeginPositionP07547737) + 1)), '}'), '')))), '[a-z]', '')) AS ?step1748) . BIND((STRLEN(SUBSTR(?targetMotifMatchCigarP07547MF_03143738, 1, (STRLEN(?targetMotifMatchCigarP07547MF_03143738) - STRLEN(REPLACE(?targetMotifMatchCigarP07547MF_03143738, CONCAT('^(?:[a-z]*(?:[A-Z]|-)){', STR(?step1748), '}'), ''))))) - STRLEN(REPLACE(SUBSTR(?targetMotifMatchCigarP07547MF_03143738, 1, (STRLEN(?targetMotifMatchCigarP07547MF_03143738) - STRLEN(REPLACE(?targetMotifMatchCigarP07547MF_03143738, CONCAT('^(?:[a-z]*(?:[A-Z]|-)){', STR(?step1748), '}'), '')))), '[^-]', ''))) AS ?step2749) . BIND(((?step2749 + ?targetMotifMatchRegionMatchBeginPositionMF_03143739) - 1) AS ?thisPositionOn247) . BIND(?thisPositionOn247 AS ?thisPositionOn248) . BIND(?this AS ?pfs1t750) . BIND(URI(CONCAT(STR(?thisSequence), '#position', STR(?thisPositionOn247))) AS ?pfsb244) . BIND(URI(CONCAT(STR(?thisSequence), '#position', STR(?thisPositionOn248))) AS ?pfse245) . FILTER ((SUBSTR(?thisSequenceValue, ?thisPositionOn247, 1) = 'K')) . BIND(URI(CONCAT(STR(?this), '#MF_03143a243')) AS ?annotation243) . BIND(?this AS ?pfs242) . } OPTIONAL { ?this a up:Protein . ?this up:organism ?thisOrganism . ?thisOrganism rdfs:subClassOf+ taxon:5140 . BIND(?this AS ?case31) . } OPTIONAL { ?this a up:Protein . ?this up:organism ?thisOrganism . ?thisOrganism rdfs:subClassOf+ taxon:28568 . BIND(?this AS ?case32) . } OPTIONAL { ?this a up:Protein . ?this up:organism ?thisOrganism . ?thisOrganism rdfs:subClassOf+ taxon:4892 . BIND(?this AS ?case33) . } OPTIONAL { ?this a up:Protein . ?this up:organism ?thisOrganism . ?thisOrganism rdfs:subClassOf+ taxon:4895 . BIND(?this AS ?case34) . } }