CONSTRUCT { _:931070 up:source unirule:MF_04084 . _:931071 up:fullName 'Stable signal peptide' ; up:shortName 'SSP' ; rdf:type up:Structured_Name . _:931072 up:source unirule:MF_04084 . _:931073 up:fullName 'Glycoprotein G1' ; up:shortName 'GP1' ; rdf:type up:Structured_Name . _:931074 up:source unirule:MF_04084 . _:931075 up:fullName 'Glycoprotein G2' ; up:shortName 'GP2' ; rdf:type up:Structured_Name . _:931076 up:source unirule:MF_04084 . _:931077 up:source unirule:MF_04084 . _:931078 up:source unirule:MF_04084 . _:931079 up:source unirule:MF_04084 . _:931080 up:source unirule:MF_04084 . _:931081 up:source unirule:MF_04084 . _:931082 up:source unirule:MF_04084 . _:931083 up:source unirule:MF_04084 . _:931084 up:source unirule:MF_04084 . _:931085 up:source unirule:MF_04084 . _:931086 up:source unirule:MF_04084 . _:931087 up:source unirule:MF_04084 . _:931088 up:source unirule:MF_04084 . _:931089 up:source unirule:MF_04084 . _:931090 up:source unirule:MF_04084 . _:931091 up:source unirule:MF_04084 . _:931092 up:source unirule:MF_04084 . _:931093 up:source unirule:MF_04084 . _:931094 up:source unirule:MF_04084 . _:931095 up:source unirule:MF_04084 . _:931096 up:source unirule:MF_04084 . _:931097 up:source unirule:MF_04084 . _:931098 up:source unirule:MF_04084 . _:931099 up:source unirule:MF_04084 . _:931100 up:source unirule:MF_04084 . _:931101 up:source unirule:MF_04084 . _:931102 up:source unirule:MF_04084 . _:931103 up:source unirule:MF_04084 . _:931104 up:source unirule:MF_04084 . _:931105 up:source unirule:MF_04084 . _:931106 up:source unirule:MF_04084 . _:931107 up:source unirule:MF_04084 . _:931108 up:source unirule:MF_04084 . _:931109 up:source unirule:MF_04084 . _:931110 up:source unirule:MF_04084 . _:931111 up:source unirule:MF_04084 . _:931112 up:source unirule:MF_04084 . _:931113 up:source unirule:MF_04084 . _:931114 up:source unirule:MF_04084 . _:931115 up:source unirule:MF_04084 . _:931116 up:source unirule:MF_04084 . _:931117 up:source unirule:MF_04084 . _:931118 up:source unirule:MF_04084 . _:931119 up:source unirule:MF_04084 . _:931120 up:source unirule:MF_04084 . _:931121 up:source unirule:MF_04084 . _:931122 up:source unirule:MF_04084 . _:931123 up:source unirule:MF_04084 . _:931124 up:source unirule:MF_04084 . _:931125 up:source unirule:MF_04084 . _:931126 up:source unirule:MF_04084 . _:931127 up:source unirule:MF_04084 . _:931128 up:source unirule:MF_04084 . _:931129 up:source unirule:MF_04084 . _:931130 up:source unirule:MF_04084 . _:931131 up:source unirule:MF_04084 . _:931132 up:source unirule:MF_04084 . _:931133 up:source unirule:MF_04084 . _:931134 up:source unirule:MF_04084 . _:931135 up:source unirule:MF_04084 . _:931136 up:source unirule:MF_04084 . _:931137 up:source unirule:MF_04084 . _:931138 up:source unirule:MF_04084 . _:931139 up:source unirule:MF_04084 . _:931140 up:source unirule:MF_04084 . _:931141 up:source unirule:MF_04084 . _:931142 up:source unirule:MF_04084 . _:931143 up:source unirule:MF_04084 . _:931144 up:source unirule:MF_04084 . _:931145 up:source unirule:MF_04084 . _:931146 up:source unirule:MF_04084 . _:931147 up:source unirule:MF_04084 . _:931148 up:source unirule:MF_04084 . _:931149 up:source unirule:MF_04084 . _:931150 up:source unirule:MF_04084 . _:931151 up:source unirule:MF_04084 . _:931152 up:source unirule:MF_04084 . _:931153 up:source unirule:MF_04084 . _:931154 up:source unirule:MF_04084 . _:931155 up:source unirule:MF_04084 . _:931156 up:source unirule:MF_04084 . _:931157 up:source unirule:MF_04084 . _:931158 up:source unirule:MF_04084 . _:931159 up:source unirule:MF_04084 . _:931160 up:source unirule:MF_04084 . _:931161 up:source unirule:MF_04084 . _:931162 up:source unirule:MF_04084 . _:931163 up:source unirule:MF_04084 . _:931164 up:source unirule:MF_04084 . ?this up:annotation ?annotation5 , ?annotation6 , ?annotation7 , ?annotation8 , ?annotation9 , ?annotation14 , ?annotation19 , ?annotation24 , ?annotation25 , ?annotation26 , ?annotation27 ; up:classifiedWith GO:0016020 , GO:0019031 , GO:0019062 , GO:0019065 , GO:0020002 , GO:0039654 , GO:0055036 , keyword:1015 , keyword:1032 , keyword:1038 , keyword:1040 , keyword:1043 , keyword:1133 , keyword:1160 , keyword:1161 , keyword:1162 , keyword:1164 , keyword:1168 , keyword:1170 , keyword:261 , keyword:325 , keyword:449 , keyword:472 , keyword:479 , keyword:519 , keyword:812 , keyword:862 , keyword:945 , keyword:946 ; up:component ?namedpart1 , ?namedpart2 , ?namedpart3 ; up:recommendedName ?name0 . ?name0 up:fullName 'Pre-glycoprotein polyprotein GP complex' ; up:shortName 'Pre-GP-C' ; rdf:type up:Structured_Name . ?namedpart1 up:recommendedName _:931071 . ?namedpart2 up:recommendedName _:931073 . ?namedpart3 up:recommendedName _:931075 . ?gene4 skos:prefLabel 'GPC' . ?annotation5 a up:Function_Annotation ; rdfs:comment '[Stable signal peptide]: Functions as a cleaved signal peptide that is retained as the third component of the GP complex (GP-C). Helps to stabilize the spike complex in its native conformation. The SSP is required for efficient glycoprotein expression, post-translational maturation cleavage of G1 and G2, glycoprotein transport to the cell surface plasma membrane, formation of infectious virus particles, and acid pH-dependent glycoprotein-mediated cell fusion.' . ?annotation6 a up:Function_Annotation ; rdfs:comment '[Glycoprotein G2]: Forms the virion spikes together with glycoprotein G1. The glycoprotein spike trimers are connected to the underlying matrix. Class I viral fusion protein that directs fusion of viral and host endosomal membranes, leading to delivery of the nucleocapsid into the cytoplasm. Membrane fusion is mediated by irreversible conformational changes induced by acidification.' . ?annotation7 a up:Subunit_Annotation ; rdfs:comment '[Stable signal peptide]: Interacts with glycoprotein G2. Part of the GP complex (GP-C) together with glycoprotein G1 and glycoprotein G2. The GP-complex interacts with protein Z, which interacts with ribonucleocapsid; these interactions may induce virion budding.' . ?annotation8 a up:Subunit_Annotation ; rdfs:comment '[Glycoprotein G2]: Homotrimer. Interacts with the stable signal peptide. In pre-fusion state, G2 homotrimers bind G1 homotrimers via ionic interactions. Part of the GP complex (GP-C) together with glycoprotein G1 and the stable signal peptide. Acidification in the endosome triggers rearrangements, which ultimately leads to a 6 helix bundle formed by the two heptad repeat domains (HR1 and HR2) in post-fusion state. The GP-complex interacts with protein Z, which interacts with ribonucleocapsid; these interactions may induce virion budding.' . ?annotation9 a up:Subcellular_Location_Annotation . ?annotation9li10 up:cellularComponent <http://purl.uniprot.org/locations/null>. ?annotation9li11 up:cellularComponent <http://purl.uniprot.org/locations/null>. ?annotation9li12 up:cellularComponent <http://purl.uniprot.org/locations/null>. ?annotation9li13 up:cellularComponent <http://purl.uniprot.org/locations/null>. ?annotation14 a up:Subcellular_Location_Annotation . ?annotation14li15 up:cellularComponent <http://purl.uniprot.org/locations/null>. ?annotation14li16 up:cellularComponent <http://purl.uniprot.org/locations/null>. ?annotation14li17 up:cellularComponent <http://purl.uniprot.org/locations/null>. ?annotation14li18 up:cellularComponent <http://purl.uniprot.org/locations/null>. ?annotation19 a up:Subcellular_Location_Annotation ; rdfs:comment 'Binding to the stable signal peptide masks endogenous ER localization signals in the cytoplasmic domain of G2 to ensure that only the fully assembled, tripartite GP complex is transported for virion assembly' . ?annotation19li20 up:cellularComponent <http://purl.uniprot.org/locations/null>. ?annotation19li21 up:cellularComponent <http://purl.uniprot.org/locations/null>. ?annotation19li22 up:cellularComponent <http://purl.uniprot.org/locations/null>. ?annotation19li23 up:cellularComponent <http://purl.uniprot.org/locations/null>. ?annotation24 a up:Domain_Annotation ; rdfs:comment '[Stable signal peptide]: The N-terminus is localized at the extracellular side of the GP-C, with a part embedded in the membrane probably.' . ?annotation25 a up:Domain_Annotation ; rdfs:comment '[Glycoprotein G2]: Contains 1 fusion peptide at the N-terminus, 2 heptad repeats domains HR1 and HR2 and, at the C-terminus, a cytoplasmic domain that plays a role in ER location. Also contains a zinc-binding domain that allows SSP retention in the GPC complex by accepting a cysteine from SSP as the fourth ligand.' . ?annotation26 a up:PTM_Annotation ; rdfs:comment '[Pre-glycoprotein polyprotein GP complex]: Specific enzymatic cleavages in vivo yield mature proteins. GP-C polyprotein is cleaved in the endoplasmic reticulum by the host protease MBTPS1. Only cleaved glycoprotein is incorporated into virions. The SSP remains stably associated with the GP complex following cleavage by signal peptidase.' . ?annotation27 a up:Similarity_Annotation ; rdfs:comment 'Belongs to the arenaviridae GPC protein family.' . ?pfs31 up:annotation ?annotation32 , ?annotation37 , ?annotation42 . ?annotation32 faldo:begin ?pfsb33 ; faldo:end ?pfse34 ; rdf:type up:Site_Annotation ; rdfs:comment 'Binding to the host receptor LAMP1' . ?pfsb33 faldo:position ?thisPositionOn35 ; rdf:type faldo:ExactPosition . ?pfse34 faldo:position ?thisPositionOn36 ; rdf:type faldo:ExactPosition . ?annotation37 faldo:begin ?pfsb38 ; faldo:end ?pfse39 ; rdf:type up:Site_Annotation ; rdfs:comment 'Binding to the host receptor LAMP1' . ?pfsb38 faldo:position ?thisPositionOn40 ; rdf:type faldo:ExactPosition . ?pfse39 faldo:position ?thisPositionOn41 ; rdf:type faldo:ExactPosition . ?annotation42 faldo:begin ?pfsb43 ; faldo:end ?pfse44 ; rdf:type up:Site_Annotation ; rdfs:comment 'Binding to the host receptor LAMP1' . ?pfsb43 faldo:position ?thisPositionOn45 ; rdf:type faldo:ExactPosition . ?pfse44 faldo:position ?thisPositionOn46 ; rdf:type faldo:ExactPosition . ?pfs47 up:annotation ?annotation48 . ?annotation48 faldo:begin ?pfsb49 ; faldo:end ?pfse50 ; up:ligand ?ligand51 ; rdf:type up:Binding_Site_Annotation . ?pfsb49 faldo:position ?thisPositionOn52 ; rdf:type faldo:ExactPosition . ?pfse50 faldo:position ?thisPositionOn53 ; rdf:type faldo:ExactPosition . ?ligand51 rdfs:subClassOf chebi:29105 . ?pfs54 up:annotation ?annotation55 . ?annotation55 faldo:begin ?pfsb56 ; faldo:end ?pfse57 ; up:ligand ?ligand58 ; rdf:type up:Binding_Site_Annotation . ?pfsb56 faldo:position ?thisPositionOn59 ; rdf:type faldo:ExactPosition . ?pfse57 faldo:position ?thisPositionOn60 ; rdf:type faldo:ExactPosition . ?ligand58 rdfs:subClassOf chebi:29105 . ?pfs61 up:annotation ?annotation62 . ?annotation62 faldo:begin ?pfsb63 ; faldo:end ?pfse64 ; up:ligand ?ligand65 ; rdf:type up:Binding_Site_Annotation . ?pfsb63 faldo:position ?thisPositionOn66 ; rdf:type faldo:ExactPosition . ?pfse64 faldo:position ?thisPositionOn67 ; rdf:type faldo:ExactPosition . ?ligand65 rdfs:subClassOf chebi:29105 . ?pfs68 up:annotation ?annotation69 . ?annotation69 faldo:begin ?pfsb70 ; faldo:end ?pfse71 ; up:ligand ?ligand72 ; rdf:type up:Binding_Site_Annotation . ?pfsb70 faldo:position ?thisPositionOn73 ; rdf:type faldo:ExactPosition . ?pfse71 faldo:position ?thisPositionOn74 ; rdf:type faldo:ExactPosition . ?ligand72 rdfs:subClassOf chebi:29105 . ?pfs75 up:annotation ?annotation76 . ?annotation76 faldo:begin ?pfsb77 ; faldo:end ?pfse78 ; up:ligand ?ligand79 ; rdf:type up:Binding_Site_Annotation . ?pfsb77 faldo:position ?thisPositionOn80 ; rdf:type faldo:ExactPosition . ?pfse78 faldo:position ?thisPositionOn81 ; rdf:type faldo:ExactPosition . ?ligand79 rdfs:subClassOf chebi:29105 . ?pfs82 up:annotation ?annotation83 . ?annotation83 faldo:begin ?pfsb84 ; faldo:end ?pfse85 ; up:ligand ?ligand86 ; rdf:type up:Binding_Site_Annotation . ?pfsb84 faldo:position ?thisPositionOn87 ; rdf:type faldo:ExactPosition . ?pfse85 faldo:position ?thisPositionOn88 ; rdf:type faldo:ExactPosition . ?ligand86 rdfs:subClassOf chebi:29105 . ?pfs89 up:annotation ?annotation90 . ?annotation90 faldo:begin ?pfsb91 ; faldo:end ?pfse92 ; up:ligand ?ligand93 ; rdf:type up:Binding_Site_Annotation . ?pfsb91 faldo:position ?thisPositionOn94 ; rdf:type faldo:ExactPosition . ?pfse92 faldo:position ?thisPositionOn95 ; rdf:type faldo:ExactPosition . ?ligand93 rdfs:subClassOf chebi:29105 . ?pfs96 up:annotation ?annotation97 . ?annotation97 faldo:begin ?pfsb98 ; faldo:end ?pfse99 ; up:ligand ?ligand100 ; rdf:type up:Binding_Site_Annotation . ?pfsb98 faldo:position ?thisPositionOn101 ; rdf:type faldo:ExactPosition . ?pfse99 faldo:position ?thisPositionOn102 ; rdf:type faldo:ExactPosition . ?ligand100 rdfs:subClassOf chebi:29105 . ?pfs103 up:annotation ?annotation104 . ?annotation104 faldo:begin ?pfsb105 ; faldo:end ?pfse106 ; rdf:type up:Chain_Annotation ; rdfs:comment 'Pre-glycoprotein polyprotein GP complex' . ?pfsb105 faldo:position ?thisPositionOn107 ; rdf:type faldo:ExactPosition . ?pfse106 faldo:position ?thisPositionOn108 ; rdf:type faldo:ExactPosition . ?pfs109 up:annotation ?annotation110 . ?annotation110 faldo:begin ?pfsb111 ; faldo:end ?pfse112 ; rdf:type up:Chain_Annotation ; rdfs:comment 'Stable signal peptide' . ?pfsb111 faldo:position ?thisPositionOn113 ; rdf:type faldo:ExactPosition . ?pfse112 faldo:position ?thisPositionOn114 ; rdf:type faldo:ExactPosition . ?pfs115 up:annotation ?annotation116 . ?annotation116 faldo:begin ?pfsb117 ; faldo:end ?pfse118 ; rdf:type up:Chain_Annotation ; rdfs:comment 'Glycoprotein G1' . ?pfsb117 faldo:position ?thisPositionOn119 ; rdf:type faldo:ExactPosition . ?pfse118 faldo:position ?thisPositionOn120 ; rdf:type faldo:ExactPosition . ?pfs121 up:annotation ?annotation122 . ?annotation122 faldo:begin ?pfsb123 ; faldo:end ?pfse124 ; rdf:type up:Chain_Annotation ; rdfs:comment 'Glycoprotein G2' . ?pfsb123 faldo:position ?thisPositionOn125 ; rdf:type faldo:ExactPosition . ?pfse124 faldo:position ?thisPositionOn126 ; rdf:type faldo:ExactPosition . ?pfs127 up:annotation ?annotation128 . ?annotation128 faldo:begin ?pfsb129 ; faldo:end ?pfse130 ; rdf:type up:Topological_Domain_Annotation ; rdfs:comment 'Extracellular' . ?pfsb129 faldo:position ?thisPositionOn131 ; rdf:type faldo:ExactPosition . ?pfse130 faldo:position ?thisPositionOn132 ; rdf:type faldo:ExactPosition . ?pfs133 up:annotation ?annotation134 . ?annotation134 faldo:begin ?pfsb135 ; faldo:end ?pfse136 ; rdf:type up:Transmembrane_Annotation ; rdfs:comment 'Helical' . ?pfsb135 faldo:position ?thisPositionOn137 ; rdf:type faldo:ExactPosition . ?pfse136 faldo:position ?thisPositionOn138 ; rdf:type faldo:ExactPosition . ?pfs139 up:annotation ?annotation140 . ?annotation140 faldo:begin ?pfsb141 ; faldo:end ?pfse142 ; rdf:type up:Topological_Domain_Annotation ; rdfs:comment 'Cytoplasmic' . ?pfsb141 faldo:position ?thisPositionOn143 ; rdf:type faldo:ExactPosition . ?pfse142 faldo:position ?thisPositionOn144 ; rdf:type faldo:ExactPosition . ?pfs145 up:annotation ?annotation146 . ?annotation146 faldo:begin ?pfsb147 ; faldo:end ?pfse148 ; rdf:type up:Topological_Domain_Annotation ; rdfs:comment 'Extracellular' . ?pfsb147 faldo:position ?thisPositionOn149 ; rdf:type faldo:ExactPosition . ?pfse148 faldo:position ?thisPositionOn150 ; rdf:type faldo:ExactPosition . ?pfs151 up:annotation ?annotation152 . ?annotation152 faldo:begin ?pfsb153 ; faldo:end ?pfse154 ; rdf:type up:Transmembrane_Annotation ; rdfs:comment 'Helical' . ?pfsb153 faldo:position ?thisPositionOn155 ; rdf:type faldo:ExactPosition . ?pfse154 faldo:position ?thisPositionOn156 ; rdf:type faldo:ExactPosition . ?pfs157 up:annotation ?annotation158 . ?annotation158 faldo:begin ?pfsb159 ; faldo:end ?pfse160 ; rdf:type up:Topological_Domain_Annotation ; rdfs:comment 'Cytoplasmic' . ?pfsb159 faldo:position ?thisPositionOn161 ; rdf:type faldo:ExactPosition . ?pfse160 faldo:position ?thisPositionOn162 ; rdf:type faldo:ExactPosition . ?pfs163 up:annotation ?annotation164 . ?annotation164 faldo:begin ?pfsb165 ; faldo:end ?pfse166 ; rdf:type up:Site_Annotation ; rdfs:comment 'Cleavage; by host signal peptidase' . ?pfsb165 faldo:position ?thisPositionOn167 ; rdf:type faldo:ExactPosition . ?pfse166 faldo:position ?thisPositionOn168 ; rdf:type faldo:ExactPosition . ?pfs169 up:annotation ?annotation170 . ?annotation170 faldo:begin ?pfsb171 ; faldo:end ?pfse172 ; rdf:type up:Site_Annotation ; rdfs:comment 'Cleavage; by host MBTPS1' . ?pfsb171 faldo:position ?thisPositionOn173 ; rdf:type faldo:ExactPosition . ?pfse172 faldo:position ?thisPositionOn174 ; rdf:type faldo:ExactPosition . ?pfs175 up:annotation ?annotation176 . ?annotation176 faldo:begin ?pfsb177 ; faldo:end ?pfse178 ; rdf:type up:Region_Annotation ; rdfs:comment 'Fusion' . ?pfsb177 faldo:position ?thisPositionOn179 ; rdf:type faldo:ExactPosition . ?pfse178 faldo:position ?thisPositionOn180 ; rdf:type faldo:ExactPosition . ?pfs181 up:annotation ?annotation182 . ?annotation182 faldo:begin ?pfsb183 ; faldo:end ?pfse184 ; rdf:type up:Region_Annotation ; rdfs:comment 'HR1' . ?pfsb183 faldo:position ?thisPositionOn185 ; rdf:type faldo:ExactPosition . ?pfse184 faldo:position ?thisPositionOn186 ; rdf:type faldo:ExactPosition . ?pfs187 up:annotation ?annotation188 . ?annotation188 faldo:begin ?pfsb189 ; faldo:end ?pfse190 ; rdf:type up:Region_Annotation ; rdfs:comment 'HR2' . ?pfsb189 faldo:position ?thisPositionOn191 ; rdf:type faldo:ExactPosition . ?pfse190 faldo:position ?thisPositionOn192 ; rdf:type faldo:ExactPosition . ?pfs193 up:annotation ?annotation194 . ?annotation194 faldo:begin ?pfsb195 ; faldo:end ?pfse196 ; rdf:type up:Initiator_Methionine_Annotation ; rdfs:comment 'Removed; by host' . ?pfsb195 faldo:position ?thisPositionOn197 ; rdf:type faldo:ExactPosition . ?pfse196 faldo:position ?thisPositionOn198 ; rdf:type faldo:ExactPosition . ?pfs199 up:annotation ?annotation200 . ?annotation200 faldo:begin ?pfsb201 ; faldo:end ?pfse202 ; rdf:type up:Lipidation_Annotation ; rdfs:comment 'N-myristoyl glycine; by host' . ?pfsb201 faldo:position ?thisPositionOn203 ; rdf:type faldo:ExactPosition . ?pfse202 faldo:position ?thisPositionOn204 ; rdf:type faldo:ExactPosition . ?pfs205 up:annotation ?annotation206 . ?annotation206 faldo:begin ?pfsb207 ; faldo:end ?pfse208 ; rdf:type up:Glycosylation_Annotation ; rdfs:comment 'N-linked (GlcNAc...) asparagine; by host' . ?pfsb207 faldo:position ?thisPositionOn209 ; rdf:type faldo:ExactPosition . ?pfse208 faldo:position ?thisPositionOn210 ; rdf:type faldo:ExactPosition . ?pfs211 up:annotation ?annotation212 . ?annotation212 faldo:begin ?pfsb213 ; faldo:end ?pfse214 ; rdf:type up:Glycosylation_Annotation ; rdfs:comment 'N-linked (GlcNAc...) asparagine; by host' . ?pfsb213 faldo:position ?thisPositionOn215 ; rdf:type faldo:ExactPosition . ?pfse214 faldo:position ?thisPositionOn216 ; rdf:type faldo:ExactPosition . ?pfs217 up:annotation ?annotation218 . ?annotation218 faldo:begin ?pfsb219 ; faldo:end ?pfse220 ; rdf:type up:Glycosylation_Annotation ; rdfs:comment 'N-linked (GlcNAc...) asparagine; by host' . ?pfsb219 faldo:position ?thisPositionOn221 ; rdf:type faldo:ExactPosition . ?pfse220 faldo:position ?thisPositionOn222 ; rdf:type faldo:ExactPosition . ?pfs223 up:annotation ?annotation224 . ?annotation224 faldo:begin ?pfsb225 ; faldo:end ?pfse226 ; rdf:type up:Glycosylation_Annotation ; rdfs:comment 'N-linked (GlcNAc...) asparagine; by host' . ?pfsb225 faldo:position ?thisPositionOn227 ; rdf:type faldo:ExactPosition . ?pfse226 faldo:position ?thisPositionOn228 ; rdf:type faldo:ExactPosition . ?pfs229 up:annotation ?annotation230 . ?annotation230 faldo:begin ?pfsb231 ; faldo:end ?pfse232 ; rdf:type up:Glycosylation_Annotation ; rdfs:comment 'N-linked (GlcNAc...) asparagine; by host' . ?pfsb231 faldo:position ?thisPositionOn233 ; rdf:type faldo:ExactPosition . ?pfse232 faldo:position ?thisPositionOn234 ; rdf:type faldo:ExactPosition . ?pfs235 up:annotation ?annotation236 . ?annotation236 faldo:begin ?pfsb237 ; faldo:end ?pfse238 ; rdf:type up:Glycosylation_Annotation ; rdfs:comment 'N-linked (GlcNAc...) asparagine; by host' . ?pfsb237 faldo:position ?thisPositionOn239 ; rdf:type faldo:ExactPosition . ?pfse238 faldo:position ?thisPositionOn240 ; rdf:type faldo:ExactPosition . ?pfs241 up:annotation ?annotation242 . ?annotation242 faldo:begin ?pfsb243 ; faldo:end ?pfse244 ; rdf:type up:Glycosylation_Annotation ; rdfs:comment 'N-linked (GlcNAc...) asparagine; by host' . ?pfsb243 faldo:position ?thisPositionOn245 ; rdf:type faldo:ExactPosition . ?pfse244 faldo:position ?thisPositionOn246 ; rdf:type faldo:ExactPosition . ?pfs247 up:annotation ?annotation248 . ?annotation248 faldo:begin ?pfsb249 ; faldo:end ?pfse250 ; rdf:type up:Glycosylation_Annotation ; rdfs:comment 'N-linked (GlcNAc...) asparagine; by host' . ?pfsb249 faldo:position ?thisPositionOn251 ; rdf:type faldo:ExactPosition . ?pfse250 faldo:position ?thisPositionOn252 ; rdf:type faldo:ExactPosition . ?pfs253 up:annotation ?annotation254 . ?annotation254 faldo:begin ?pfsb255 ; faldo:end ?pfse256 ; rdf:type up:Glycosylation_Annotation ; rdfs:comment 'N-linked (GlcNAc...) asparagine; by host' . ?pfsb255 faldo:position ?thisPositionOn257 ; rdf:type faldo:ExactPosition . ?pfse256 faldo:position ?thisPositionOn258 ; rdf:type faldo:ExactPosition . ?pfs259 up:annotation ?annotation260 . ?annotation260 faldo:begin ?pfsb261 ; faldo:end ?pfse262 ; rdf:type up:Glycosylation_Annotation ; rdfs:comment 'N-linked (GlcNAc...) asparagine; by host' . ?pfsb261 faldo:position ?thisPositionOn263 ; rdf:type faldo:ExactPosition . ?pfse262 faldo:position ?thisPositionOn264 ; rdf:type faldo:ExactPosition . ?pfs265 up:annotation ?annotation266 . ?annotation266 faldo:begin ?pfsb267 ; faldo:end ?pfse268 ; rdf:type up:Glycosylation_Annotation ; rdfs:comment 'N-linked (GlcNAc...) asparagine; by host' . ?pfsb267 faldo:position ?thisPositionOn269 ; rdf:type faldo:ExactPosition . ?pfse268 faldo:position ?thisPositionOn270 ; rdf:type faldo:ExactPosition . ?pfs271 up:annotation ?annotation272 . ?annotation272 faldo:begin ?pfsb273 ; faldo:end ?pfse274 ; rdf:type up:Disulfide_Bond_Annotation . ?pfsb273 faldo:position ?thisPositionOn275 ; rdf:type faldo:ExactPosition . ?pfse274 faldo:position ?thisPositionOn276 ; rdf:type faldo:ExactPosition . ?pfs277 up:annotation ?annotation278 . ?annotation278 faldo:begin ?pfsb279 ; faldo:end ?pfse280 ; rdf:type up:Disulfide_Bond_Annotation . ?pfsb279 faldo:position ?thisPositionOn281 ; rdf:type faldo:ExactPosition . ?pfse280 faldo:position ?thisPositionOn282 ; rdf:type faldo:ExactPosition . ?pfs283 up:annotation ?annotation284 . ?annotation284 faldo:begin ?pfsb285 ; faldo:end ?pfse286 ; rdf:type up:Disulfide_Bond_Annotation . ?pfsb285 faldo:position ?thisPositionOn287 ; rdf:type faldo:ExactPosition . ?pfse286 faldo:position ?thisPositionOn288 ; rdf:type faldo:ExactPosition . ?pfs289 up:annotation ?annotation290 . ?annotation290 faldo:begin ?pfsb291 ; faldo:end ?pfse292 ; rdf:type up:Disulfide_Bond_Annotation . ?pfsb291 faldo:position ?thisPositionOn293 ; rdf:type faldo:ExactPosition . ?pfse292 faldo:position ?thisPositionOn294 ; rdf:type faldo:ExactPosition . ?pfs295 up:annotation ?annotation296 . ?annotation296 faldo:begin ?pfsb297 ; faldo:end ?pfse298 ; rdf:type up:Disulfide_Bond_Annotation . ?pfsb297 faldo:position ?thisPositionOn299 ; rdf:type faldo:ExactPosition . ?pfse298 faldo:position ?thisPositionOn300 ; rdf:type faldo:ExactPosition . ?pfs301 up:annotation ?annotation302 . ?annotation302 faldo:begin ?pfsb303 ; faldo:end ?pfse304 ; rdf:type up:Disulfide_Bond_Annotation . ?pfsb303 faldo:position ?thisPositionOn305 ; rdf:type faldo:ExactPosition . ?pfse304 faldo:position ?thisPositionOn306 ; rdf:type faldo:ExactPosition . ?pfs307 up:annotation ?annotation308 . ?annotation308 faldo:begin ?pfsb309 ; faldo:end ?pfse310 ; rdf:type up:Disulfide_Bond_Annotation . ?pfsb309 faldo:position ?thisPositionOn311 ; rdf:type faldo:ExactPosition . ?pfse310 faldo:position ?thisPositionOn312 ; rdf:type faldo:ExactPosition . ?pfs313 up:annotation ?annotation314 . ?annotation314 faldo:begin ?pfsb315 ; faldo:end ?pfse316 ; rdf:type up:Region_Annotation ; rdfs:comment 'Binding to the host receptor LAMP1' . ?pfsb315 faldo:position ?thisPositionOn317 ; rdf:type faldo:ExactPosition . ?pfse316 faldo:position ?thisPositionOn318 ; rdf:type faldo:ExactPosition . _:931165 a rdf:Statement ; up:attribution _:931070 ; rdf:subject ?this ; rdf:predicate up:recommendedName ; rdf:object ?name0 . _:931166 a rdf:Statement ; up:attribution _:931072 ; rdf:subject ?this ; rdf:predicate up:component ; rdf:object ?namedpart1 . _:931167 a rdf:Statement ; up:attribution _:931074 ; rdf:subject ?this ; rdf:predicate up:component ; rdf:object ?namedpart2 . _:931168 a rdf:Statement ; up:attribution _:931076 ; rdf:subject ?this ; rdf:predicate up:component ; rdf:object ?namedpart3 . _:931169 a rdf:Statement ; up:attribution _:931077 ; rdf:subject ?gene4 ; rdf:predicate up:encodedBy ; rdf:object ?gene4 . _:931170 a rdf:Statement ; up:attribution _:931078 ; rdf:subject ?this ; rdf:predicate up:annotation ; rdf:object ?annotation5 . _:931171 a rdf:Statement ; up:attribution _:931079 ; rdf:subject ?this ; rdf:predicate up:annotation ; rdf:object ?annotation6 . _:931172 a rdf:Statement ; up:attribution _:931080 ; rdf:subject ?this ; rdf:predicate up:annotation ; rdf:object ?annotation7 . _:931173 a rdf:Statement ; up:attribution _:931081 ; rdf:subject ?this ; rdf:predicate up:annotation ; rdf:object ?annotation8 . _:931174 a rdf:Statement ; up:attribution _:931082 ; rdf:subject ?this ; rdf:predicate up:annotation ; rdf:object ?annotation9 . _:931175 a rdf:Statement ; up:attribution _:931083 ; rdf:subject ?this ; rdf:predicate up:annotation ; rdf:object ?annotation14 . _:931176 a rdf:Statement ; up:attribution _:931084 ; rdf:subject ?this ; rdf:predicate up:annotation ; rdf:object ?annotation19 . _:931177 a rdf:Statement ; up:attribution _:931085 ; rdf:subject ?this ; rdf:predicate up:annotation ; rdf:object ?annotation24 . _:931178 a rdf:Statement ; up:attribution _:931086 ; rdf:subject ?this ; rdf:predicate up:annotation ; rdf:object ?annotation25 . _:931179 a rdf:Statement ; up:attribution _:931087 ; rdf:subject ?this ; rdf:predicate up:annotation ; rdf:object ?annotation26 . _:931180 a rdf:Statement ; up:attribution _:931088 ; rdf:subject ?this ; rdf:predicate up:annotation ; rdf:object ?annotation27 . _:931181 a rdf:Statement ; up:attribution _:931089 ; rdf:subject ?this ; rdf:predicate up:classifiedWith ; rdf:object keyword:1015 . _:931182 a rdf:Statement ; up:attribution _:931090 ; rdf:subject ?this ; rdf:predicate up:classifiedWith ; rdf:object keyword:1170 . _:931183 a rdf:Statement ; up:attribution _:931091 ; rdf:subject ?this ; rdf:predicate up:classifiedWith ; rdf:object keyword:1168 . _:931184 a rdf:Statement ; up:attribution _:931092 ; rdf:subject ?this ; rdf:predicate up:classifiedWith ; rdf:object keyword:325 . _:931185 a rdf:Statement ; up:attribution _:931093 ; rdf:subject ?this ; rdf:predicate up:classifiedWith ; rdf:object keyword:1032 . _:931186 a rdf:Statement ; up:attribution _:931094 ; rdf:subject ?this ; rdf:predicate up:classifiedWith ; rdf:object keyword:1038 . _:931187 a rdf:Statement ; up:attribution _:931095 ; rdf:subject ?this ; rdf:predicate up:classifiedWith ; rdf:object keyword:1040 . _:931188 a rdf:Statement ; up:attribution _:931096 ; rdf:subject ?this ; rdf:predicate up:classifiedWith ; rdf:object keyword:1043 . _:931189 a rdf:Statement ; up:attribution _:931097 ; rdf:subject ?this ; rdf:predicate up:classifiedWith ; rdf:object keyword:945 . _:931190 a rdf:Statement ; up:attribution _:931098 ; rdf:subject ?this ; rdf:predicate up:classifiedWith ; rdf:object keyword:449 . _:931191 a rdf:Statement ; up:attribution _:931099 ; rdf:subject ?this ; rdf:predicate up:classifiedWith ; rdf:object keyword:472 . _:931192 a rdf:Statement ; up:attribution _:931100 ; rdf:subject ?this ; rdf:predicate up:classifiedWith ; rdf:object keyword:479 . _:931193 a rdf:Statement ; up:attribution _:931101 ; rdf:subject ?this ; rdf:predicate up:classifiedWith ; rdf:object keyword:519 . _:931194 a rdf:Statement ; up:attribution _:931102 ; rdf:subject ?this ; rdf:predicate up:classifiedWith ; rdf:object keyword:812 . _:931195 a rdf:Statement ; up:attribution _:931103 ; rdf:subject ?this ; rdf:predicate up:classifiedWith ; rdf:object keyword:1133 . _:931196 a rdf:Statement ; up:attribution _:931104 ; rdf:subject ?this ; rdf:predicate up:classifiedWith ; rdf:object keyword:1161 . _:931197 a rdf:Statement ; up:attribution _:931105 ; rdf:subject ?this ; rdf:predicate up:classifiedWith ; rdf:object keyword:261 . _:931198 a rdf:Statement ; up:attribution _:931106 ; rdf:subject ?this ; rdf:predicate up:classifiedWith ; rdf:object keyword:1162 . _:931199 a rdf:Statement ; up:attribution _:931107 ; rdf:subject ?this ; rdf:predicate up:classifiedWith ; rdf:object keyword:946 . _:931200 a rdf:Statement ; up:attribution _:931108 ; rdf:subject ?this ; rdf:predicate up:classifiedWith ; rdf:object keyword:1164 . _:931201 a rdf:Statement ; up:attribution _:931109 ; rdf:subject ?this ; rdf:predicate up:classifiedWith ; rdf:object keyword:1160 . _:931202 a rdf:Statement ; up:attribution _:931110 ; rdf:subject ?this ; rdf:predicate up:classifiedWith ; rdf:object keyword:862 . _:931203 a rdf:Statement ; up:attribution _:931111 ; rdf:subject ?this ; rdf:predicate up:classifiedWith ; rdf:object GO:0020002 . _:931204 a rdf:Statement ; up:attribution _:931112 ; rdf:subject ?this ; rdf:predicate up:classifiedWith ; rdf:object GO:0016020 . _:931205 a rdf:Statement ; up:attribution _:931113 ; rdf:subject ?this ; rdf:predicate up:classifiedWith ; rdf:object GO:0019031 . _:931206 a rdf:Statement ; up:attribution _:931114 ; rdf:subject ?this ; rdf:predicate up:classifiedWith ; rdf:object GO:0055036 . _:931207 a rdf:Statement ; up:attribution _:931115 ; rdf:subject ?this ; rdf:predicate up:classifiedWith ; rdf:object GO:0039654 . _:931208 a rdf:Statement ; up:attribution _:931116 ; rdf:subject ?this ; rdf:predicate up:classifiedWith ; rdf:object GO:0019065 . _:931209 a rdf:Statement ; up:attribution _:931117 ; rdf:subject ?this ; rdf:predicate up:classifiedWith ; rdf:object GO:0019062 . _:931210 a rdf:Statement ; up:source unirule:MF_04084 ; rdf:subject ?pfs31 ; rdf:predicate up:annotation ; rdf:object ?annotation32 . _:931211 a rdf:Statement ; up:attribution _:931118 ; rdf:subject ?pfs31 ; rdf:predicate up:annotation ; rdf:object ?annotation32 . _:931212 a rdf:Statement ; up:source unirule:MF_04084 ; rdf:subject ?pfs31 ; rdf:predicate up:annotation ; rdf:object ?annotation37 . _:931213 a rdf:Statement ; up:attribution _:931119 ; rdf:subject ?pfs31 ; rdf:predicate up:annotation ; rdf:object ?annotation37 . _:931214 a rdf:Statement ; up:source unirule:MF_04084 ; rdf:subject ?pfs31 ; rdf:predicate up:annotation ; rdf:object ?annotation42 . _:931215 a rdf:Statement ; up:attribution _:931120 ; rdf:subject ?pfs31 ; rdf:predicate up:annotation ; rdf:object ?annotation42 . _:931216 a rdf:Statement ; up:source unirule:MF_04084 ; rdf:subject ?pfs47 ; rdf:predicate up:annotation ; rdf:object ?annotation48 . _:931217 a rdf:Statement ; up:attribution _:931121 ; rdf:subject ?pfs47 ; rdf:predicate up:annotation ; rdf:object ?annotation48 . _:931218 a rdf:Statement ; up:source unirule:MF_04084 ; rdf:subject ?pfs54 ; rdf:predicate up:annotation ; rdf:object ?annotation55 . _:931219 a rdf:Statement ; up:attribution _:931122 ; rdf:subject ?pfs54 ; rdf:predicate up:annotation ; rdf:object ?annotation55 . _:931220 a rdf:Statement ; up:source unirule:MF_04084 ; rdf:subject ?pfs61 ; rdf:predicate up:annotation ; rdf:object ?annotation62 . _:931221 a rdf:Statement ; up:attribution _:931123 ; rdf:subject ?pfs61 ; rdf:predicate up:annotation ; rdf:object ?annotation62 . _:931222 a rdf:Statement ; up:source unirule:MF_04084 ; rdf:subject ?pfs68 ; rdf:predicate up:annotation ; rdf:object ?annotation69 . _:931223 a rdf:Statement ; up:attribution _:931124 ; rdf:subject ?pfs68 ; rdf:predicate up:annotation ; rdf:object ?annotation69 . _:931224 a rdf:Statement ; up:source unirule:MF_04084 ; rdf:subject ?pfs75 ; rdf:predicate up:annotation ; rdf:object ?annotation76 . _:931225 a rdf:Statement ; up:attribution _:931125 ; rdf:subject ?pfs75 ; rdf:predicate up:annotation ; rdf:object ?annotation76 . _:931226 a rdf:Statement ; up:source unirule:MF_04084 ; rdf:subject ?pfs82 ; rdf:predicate up:annotation ; rdf:object ?annotation83 . _:931227 a rdf:Statement ; up:attribution _:931126 ; rdf:subject ?pfs82 ; rdf:predicate up:annotation ; rdf:object ?annotation83 . _:931228 a rdf:Statement ; up:source unirule:MF_04084 ; rdf:subject ?pfs89 ; rdf:predicate up:annotation ; rdf:object ?annotation90 . _:931229 a rdf:Statement ; up:attribution _:931127 ; rdf:subject ?pfs89 ; rdf:predicate up:annotation ; rdf:object ?annotation90 . _:931230 a rdf:Statement ; up:source unirule:MF_04084 ; rdf:subject ?pfs96 ; rdf:predicate up:annotation ; rdf:object ?annotation97 . _:931231 a rdf:Statement ; up:attribution _:931128 ; rdf:subject ?pfs96 ; rdf:predicate up:annotation ; rdf:object ?annotation97 . _:931232 a rdf:Statement ; up:source unirule:MF_04084 ; rdf:subject ?pfs103 ; rdf:predicate up:annotation ; rdf:object ?annotation104 . _:931233 a rdf:Statement ; up:attribution _:931129 ; rdf:subject ?pfs103 ; rdf:predicate up:annotation ; rdf:object ?annotation104 . _:931234 a rdf:Statement ; up:source unirule:MF_04084 ; rdf:subject ?pfs109 ; rdf:predicate up:annotation ; rdf:object ?annotation110 . _:931235 a rdf:Statement ; up:attribution _:931130 ; rdf:subject ?pfs109 ; rdf:predicate up:annotation ; rdf:object ?annotation110 . _:931236 a rdf:Statement ; up:source unirule:MF_04084 ; rdf:subject ?pfs115 ; rdf:predicate up:annotation ; rdf:object ?annotation116 . _:931237 a rdf:Statement ; up:attribution _:931131 ; rdf:subject ?pfs115 ; rdf:predicate up:annotation ; rdf:object ?annotation116 . _:931238 a rdf:Statement ; up:source unirule:MF_04084 ; rdf:subject ?pfs121 ; rdf:predicate up:annotation ; rdf:object ?annotation122 . _:931239 a rdf:Statement ; up:attribution _:931132 ; rdf:subject ?pfs121 ; rdf:predicate up:annotation ; rdf:object ?annotation122 . _:931240 a rdf:Statement ; up:source unirule:MF_04084 ; rdf:subject ?pfs127 ; rdf:predicate up:annotation ; rdf:object ?annotation128 . _:931241 a rdf:Statement ; up:attribution _:931133 ; rdf:subject ?pfs127 ; rdf:predicate up:annotation ; rdf:object ?annotation128 . _:931242 a rdf:Statement ; up:source unirule:MF_04084 ; rdf:subject ?pfs133 ; rdf:predicate up:annotation ; rdf:object ?annotation134 . _:931243 a rdf:Statement ; up:attribution _:931134 ; rdf:subject ?pfs133 ; rdf:predicate up:annotation ; rdf:object ?annotation134 . _:931244 a rdf:Statement ; up:source unirule:MF_04084 ; rdf:subject ?pfs139 ; rdf:predicate up:annotation ; rdf:object ?annotation140 . _:931245 a rdf:Statement ; up:attribution _:931135 ; rdf:subject ?pfs139 ; rdf:predicate up:annotation ; rdf:object ?annotation140 . _:931246 a rdf:Statement ; up:source unirule:MF_04084 ; rdf:subject ?pfs145 ; rdf:predicate up:annotation ; rdf:object ?annotation146 . _:931247 a rdf:Statement ; up:attribution _:931136 ; rdf:subject ?pfs145 ; rdf:predicate up:annotation ; rdf:object ?annotation146 . _:931248 a rdf:Statement ; up:source unirule:MF_04084 ; rdf:subject ?pfs151 ; rdf:predicate up:annotation ; rdf:object ?annotation152 . _:931249 a rdf:Statement ; up:attribution _:931137 ; rdf:subject ?pfs151 ; rdf:predicate up:annotation ; rdf:object ?annotation152 . _:931250 a rdf:Statement ; up:source unirule:MF_04084 ; rdf:subject ?pfs157 ; rdf:predicate up:annotation ; rdf:object ?annotation158 . _:931251 a rdf:Statement ; up:attribution _:931138 ; rdf:subject ?pfs157 ; rdf:predicate up:annotation ; rdf:object ?annotation158 . _:931252 a rdf:Statement ; up:source unirule:MF_04084 ; rdf:subject ?pfs163 ; rdf:predicate up:annotation ; rdf:object ?annotation164 . _:931253 a rdf:Statement ; up:attribution _:931139 ; rdf:subject ?pfs163 ; rdf:predicate up:annotation ; rdf:object ?annotation164 . _:931254 a rdf:Statement ; up:source unirule:MF_04084 ; rdf:subject ?pfs169 ; rdf:predicate up:annotation ; rdf:object ?annotation170 . _:931255 a rdf:Statement ; up:attribution _:931140 ; rdf:subject ?pfs169 ; rdf:predicate up:annotation ; rdf:object ?annotation170 . _:931256 a rdf:Statement ; up:source unirule:MF_04084 ; rdf:subject ?pfs175 ; rdf:predicate up:annotation ; rdf:object ?annotation176 . _:931257 a rdf:Statement ; up:attribution _:931141 ; rdf:subject ?pfs175 ; rdf:predicate up:annotation ; rdf:object ?annotation176 . _:931258 a rdf:Statement ; up:source unirule:MF_04084 ; rdf:subject ?pfs181 ; rdf:predicate up:annotation ; rdf:object ?annotation182 . _:931259 a rdf:Statement ; up:attribution _:931142 ; rdf:subject ?pfs181 ; rdf:predicate up:annotation ; rdf:object ?annotation182 . _:931260 a rdf:Statement ; up:source unirule:MF_04084 ; rdf:subject ?pfs187 ; rdf:predicate up:annotation ; rdf:object ?annotation188 . _:931261 a rdf:Statement ; up:attribution _:931143 ; rdf:subject ?pfs187 ; rdf:predicate up:annotation ; rdf:object ?annotation188 . _:931262 a rdf:Statement ; up:source unirule:MF_04084 ; rdf:subject ?pfs193 ; rdf:predicate up:annotation ; rdf:object ?annotation194 . _:931263 a rdf:Statement ; up:attribution _:931144 ; rdf:subject ?pfs193 ; rdf:predicate up:annotation ; rdf:object ?annotation194 . _:931264 a rdf:Statement ; up:source unirule:MF_04084 ; rdf:subject ?pfs199 ; rdf:predicate up:annotation ; rdf:object ?annotation200 . _:931265 a rdf:Statement ; up:attribution _:931145 ; rdf:subject ?pfs199 ; rdf:predicate up:annotation ; rdf:object ?annotation200 . _:931266 a rdf:Statement ; up:source unirule:MF_04084 ; rdf:subject ?pfs205 ; rdf:predicate up:annotation ; rdf:object ?annotation206 . _:931267 a rdf:Statement ; up:attribution _:931146 ; rdf:subject ?pfs205 ; rdf:predicate up:annotation ; rdf:object ?annotation206 . _:931268 a rdf:Statement ; up:source unirule:MF_04084 ; rdf:subject ?pfs211 ; rdf:predicate up:annotation ; rdf:object ?annotation212 . _:931269 a rdf:Statement ; up:attribution _:931147 ; rdf:subject ?pfs211 ; rdf:predicate up:annotation ; rdf:object ?annotation212 . _:931270 a rdf:Statement ; up:source unirule:MF_04084 ; rdf:subject ?pfs217 ; rdf:predicate up:annotation ; rdf:object ?annotation218 . _:931271 a rdf:Statement ; up:attribution _:931148 ; rdf:subject ?pfs217 ; rdf:predicate up:annotation ; rdf:object ?annotation218 . _:931272 a rdf:Statement ; up:source unirule:MF_04084 ; rdf:subject ?pfs223 ; rdf:predicate up:annotation ; rdf:object ?annotation224 . _:931273 a rdf:Statement ; up:attribution _:931149 ; rdf:subject ?pfs223 ; rdf:predicate up:annotation ; rdf:object ?annotation224 . _:931274 a rdf:Statement ; up:source unirule:MF_04084 ; rdf:subject ?pfs229 ; rdf:predicate up:annotation ; rdf:object ?annotation230 . _:931275 a rdf:Statement ; up:attribution _:931150 ; rdf:subject ?pfs229 ; rdf:predicate up:annotation ; rdf:object ?annotation230 . _:931276 a rdf:Statement ; up:source unirule:MF_04084 ; rdf:subject ?pfs235 ; rdf:predicate up:annotation ; rdf:object ?annotation236 . _:931277 a rdf:Statement ; up:attribution _:931151 ; rdf:subject ?pfs235 ; rdf:predicate up:annotation ; rdf:object ?annotation236 . _:931278 a rdf:Statement ; up:source unirule:MF_04084 ; rdf:subject ?pfs241 ; rdf:predicate up:annotation ; rdf:object ?annotation242 . _:931279 a rdf:Statement ; up:attribution _:931152 ; rdf:subject ?pfs241 ; rdf:predicate up:annotation ; rdf:object ?annotation242 . _:931280 a rdf:Statement ; up:source unirule:MF_04084 ; rdf:subject ?pfs247 ; rdf:predicate up:annotation ; rdf:object ?annotation248 . _:931281 a rdf:Statement ; up:attribution _:931153 ; rdf:subject ?pfs247 ; rdf:predicate up:annotation ; rdf:object ?annotation248 . _:931282 a rdf:Statement ; up:source unirule:MF_04084 ; rdf:subject ?pfs253 ; rdf:predicate up:annotation ; rdf:object ?annotation254 . _:931283 a rdf:Statement ; up:attribution _:931154 ; rdf:subject ?pfs253 ; rdf:predicate up:annotation ; rdf:object ?annotation254 . _:931284 a rdf:Statement ; up:source unirule:MF_04084 ; rdf:subject ?pfs259 ; rdf:predicate up:annotation ; rdf:object ?annotation260 . _:931285 a rdf:Statement ; up:attribution _:931155 ; rdf:subject ?pfs259 ; rdf:predicate up:annotation ; rdf:object ?annotation260 . _:931286 a rdf:Statement ; up:source unirule:MF_04084 ; rdf:subject ?pfs265 ; rdf:predicate up:annotation ; rdf:object ?annotation266 . _:931287 a rdf:Statement ; up:attribution _:931156 ; rdf:subject ?pfs265 ; rdf:predicate up:annotation ; rdf:object ?annotation266 . _:931288 a rdf:Statement ; up:source unirule:MF_04084 ; rdf:subject ?pfs271 ; rdf:predicate up:annotation ; rdf:object ?annotation272 . _:931289 a rdf:Statement ; up:attribution _:931157 ; rdf:subject ?pfs271 ; rdf:predicate up:annotation ; rdf:object ?annotation272 . _:931290 a rdf:Statement ; up:source unirule:MF_04084 ; rdf:subject ?pfs277 ; rdf:predicate up:annotation ; rdf:object ?annotation278 . _:931291 a rdf:Statement ; up:attribution _:931158 ; rdf:subject ?pfs277 ; rdf:predicate up:annotation ; rdf:object ?annotation278 . _:931292 a rdf:Statement ; up:source unirule:MF_04084 ; rdf:subject ?pfs283 ; rdf:predicate up:annotation ; rdf:object ?annotation284 . _:931293 a rdf:Statement ; up:attribution _:931159 ; rdf:subject ?pfs283 ; rdf:predicate up:annotation ; rdf:object ?annotation284 . _:931294 a rdf:Statement ; up:source unirule:MF_04084 ; rdf:subject ?pfs289 ; rdf:predicate up:annotation ; rdf:object ?annotation290 . _:931295 a rdf:Statement ; up:attribution _:931160 ; rdf:subject ?pfs289 ; rdf:predicate up:annotation ; rdf:object ?annotation290 . _:931296 a rdf:Statement ; up:source unirule:MF_04084 ; rdf:subject ?pfs295 ; rdf:predicate up:annotation ; rdf:object ?annotation296 . _:931297 a rdf:Statement ; up:attribution _:931161 ; rdf:subject ?pfs295 ; rdf:predicate up:annotation ; rdf:object ?annotation296 . _:931298 a rdf:Statement ; up:source unirule:MF_04084 ; rdf:subject ?pfs301 ; rdf:predicate up:annotation ; rdf:object ?annotation302 . _:931299 a rdf:Statement ; up:attribution _:931162 ; rdf:subject ?pfs301 ; rdf:predicate up:annotation ; rdf:object ?annotation302 . _:931300 a rdf:Statement ; up:source unirule:MF_04084 ; rdf:subject ?pfs307 ; rdf:predicate up:annotation ; rdf:object ?annotation308 . _:931301 a rdf:Statement ; up:attribution _:931163 ; rdf:subject ?pfs307 ; rdf:predicate up:annotation ; rdf:object ?annotation308 . _:931302 a rdf:Statement ; up:source unirule:MF_04084 ; rdf:subject ?pfs313 ; rdf:predicate up:annotation ; rdf:object ?annotation314 . _:931303 a rdf:Statement ; up:attribution _:931164 ; rdf:subject ?pfs313 ; rdf:predicate up:annotation ; rdf:object ?annotation314 . } WHERE { #baseURI: http://purl.uniprot.org/unirule/MF_04084 #Rule MF_04084 Created by:pmasson on:2018-01-12 Modified by:chulo on:2023-07-04 ?this up:organism ?thisOrganism ; rdfs:seeAlso signature:MF_04084 . ?thisOrganism rdfs:subClassOf+ taxon:11617 . BIND(URI(CONCAT(STR(?this), '#MF_04084a0')) AS ?name0) . BIND(URI(CONCAT(STR(?this), '#MF_04084a1')) AS ?namedpart1) . BIND(URI(CONCAT(STR(?this), '#MF_04084a2')) AS ?namedpart2) . BIND(URI(CONCAT(STR(?this), '#MF_04084a3')) AS ?namedpart3) . BIND(URI(CONCAT(STR(?this), '#MF_04084a5')) AS ?annotation5) . BIND(URI(CONCAT(STR(?this), '#MF_04084a6')) AS ?annotation6) . BIND(URI(CONCAT(STR(?this), '#MF_04084a7')) AS ?annotation7) . BIND(URI(CONCAT(STR(?this), '#MF_04084a8')) AS ?annotation8) . BIND(URI(CONCAT(STR(?this), '#MF_04084a9')) AS ?annotation9) . BIND(URI(CONCAT(STR(?this), '#MF_04084a14')) AS ?annotation14) . BIND(URI(CONCAT(STR(?this), '#MF_04084a19')) AS ?annotation19) . BIND(URI(CONCAT(STR(?this), '#MF_04084a24')) AS ?annotation24) . BIND(URI(CONCAT(STR(?this), '#MF_04084a25')) AS ?annotation25) . BIND(URI(CONCAT(STR(?this), '#MF_04084a26')) AS ?annotation26) . BIND(URI(CONCAT(STR(?this), '#MF_04084a27')) AS ?annotation27) . OPTIONAL { ?this up:sequence ?thisSequence . ?thisSequence rdf:value ?thisSequenceValue . ?templateMotifMatch325 faldo:location ?templateMotifSequenceMatchRegionP08669326 ; edam:is_output_of ?templateMotifSequenceProfileAlignmentOperationP08669328 ; rdf:type edam:data_0869 ; rdf:value ?templateMotifCigarP08669MF_04084321 . ?templateMotifSequenceMatchRegionP08669326 faldo:begin ?templateMotifSequenceMatchBeginP08669327 . ?templateMotifSequenceMatchBeginP08669327 faldo:position ?templateMotifSequenceMatchBeginPositionP08669322 ; faldo:reference isoform:P08669-1 . ?templateMotifSequenceProfileAlignmentOperationP08669328 edam:has_input signature:MF_04084 ; rdf:type edam:operation_0300 . ?targetMotifMatch329 faldo:location ?targetMotifMatchRegionMatch330 ; edam:is_output_of ?targetMotifSequenceAlignmentOperationMF_04084332 ; rdf:type edam:data_0869 ; rdf:value ?targetMotifMatchCigarP08669MF_04084323 . ?targetMotifMatchRegionMatch330 faldo:begin ?targetMotifMatchRegionMatchBeginMF_04084331 . ?targetMotifMatchRegionMatchBeginMF_04084331 faldo:position ?targetMotifMatchRegionMatchBeginPositionMF_04084324 ; faldo:reference ?thisSequence . ?targetMotifSequenceAlignmentOperationMF_04084332 edam:has_input signature:MF_04084 ; rdf:type edam:operation_0300 . BIND(?this AS ?tagFTGRP_1) . ?this up:organism ?thisOrganism . ?thisOrganism up:scientificName ?name319 . FILTER (CONTAINS(?containsName320, ?name319)) . BIND(STRLEN(REPLACE(SUBSTR(?templateMotifCigarP08669MF_04084321, 1, (STRLEN(?templateMotifCigarP08669MF_04084321) - STRLEN(REPLACE(?templateMotifCigarP08669MF_04084321, CONCAT('^(?:-*[^-]){', STR(((92 - ?templateMotifSequenceMatchBeginPositionP08669322) + 1)), '}'), '')))), '[a-z]', '')) AS ?step1333) . BIND((STRLEN(SUBSTR(?targetMotifMatchCigarP08669MF_04084323, 1, (STRLEN(?targetMotifMatchCigarP08669MF_04084323) - STRLEN(REPLACE(?targetMotifMatchCigarP08669MF_04084323, CONCAT('^(?:[a-z]*(?:[A-Z]|-)){', STR(?step1333), '}'), ''))))) - STRLEN(REPLACE(SUBSTR(?targetMotifMatchCigarP08669MF_04084323, 1, (STRLEN(?targetMotifMatchCigarP08669MF_04084323) - STRLEN(REPLACE(?targetMotifMatchCigarP08669MF_04084323, CONCAT('^(?:[a-z]*(?:[A-Z]|-)){', STR(?step1333), '}'), '')))), '[^-]', ''))) AS ?step2334) . BIND(((?step2334 + ?targetMotifMatchRegionMatchBeginPositionMF_04084324) - 1) AS ?thisPositionOn35) . BIND(?thisPositionOn35 AS ?thisPositionOn36) . BIND(?this AS ?pfs1t335) . BIND(URI(CONCAT(STR(?thisSequence), '#position', STR(?thisPositionOn35))) AS ?pfsb33) . BIND(URI(CONCAT(STR(?thisSequence), '#position', STR(?thisPositionOn36))) AS ?pfse34) . FILTER ((SUBSTR(?thisSequenceValue, ?thisPositionOn35, 1) = 'H')) . BIND(STRLEN(REPLACE(SUBSTR(?templateMotifCigarP08669MF_04084321, 1, (STRLEN(?templateMotifCigarP08669MF_04084321) - STRLEN(REPLACE(?templateMotifCigarP08669MF_04084321, CONCAT('^(?:-*[^-]){', STR(((93 - ?templateMotifSequenceMatchBeginPositionP08669322) + 1)), '}'), '')))), '[a-z]', '')) AS ?step1336) . BIND((STRLEN(SUBSTR(?targetMotifMatchCigarP08669MF_04084323, 1, (STRLEN(?targetMotifMatchCigarP08669MF_04084323) - STRLEN(REPLACE(?targetMotifMatchCigarP08669MF_04084323, CONCAT('^(?:[a-z]*(?:[A-Z]|-)){', STR(?step1336), '}'), ''))))) - STRLEN(REPLACE(SUBSTR(?targetMotifMatchCigarP08669MF_04084323, 1, (STRLEN(?targetMotifMatchCigarP08669MF_04084323) - STRLEN(REPLACE(?targetMotifMatchCigarP08669MF_04084323, CONCAT('^(?:[a-z]*(?:[A-Z]|-)){', STR(?step1336), '}'), '')))), '[^-]', ''))) AS ?step2337) . BIND(((?step2337 + ?targetMotifMatchRegionMatchBeginPositionMF_04084324) - 1) AS ?thisPositionOn40) . BIND(?thisPositionOn40 AS ?thisPositionOn41) . BIND(?this AS ?pfs1t338) . BIND(URI(CONCAT(STR(?thisSequence), '#position', STR(?thisPositionOn40))) AS ?pfsb38) . BIND(URI(CONCAT(STR(?thisSequence), '#position', STR(?thisPositionOn41))) AS ?pfse39) . FILTER ((SUBSTR(?thisSequenceValue, ?thisPositionOn40, 1) = 'H')) . BIND(STRLEN(REPLACE(SUBSTR(?templateMotifCigarP08669MF_04084321, 1, (STRLEN(?templateMotifCigarP08669MF_04084321) - STRLEN(REPLACE(?templateMotifCigarP08669MF_04084321, CONCAT('^(?:-*[^-]){', STR(((230 - ?templateMotifSequenceMatchBeginPositionP08669322) + 1)), '}'), '')))), '[a-z]', '')) AS ?step1339) . BIND((STRLEN(SUBSTR(?targetMotifMatchCigarP08669MF_04084323, 1, (STRLEN(?targetMotifMatchCigarP08669MF_04084323) - STRLEN(REPLACE(?targetMotifMatchCigarP08669MF_04084323, CONCAT('^(?:[a-z]*(?:[A-Z]|-)){', STR(?step1339), '}'), ''))))) - STRLEN(REPLACE(SUBSTR(?targetMotifMatchCigarP08669MF_04084323, 1, (STRLEN(?targetMotifMatchCigarP08669MF_04084323) - STRLEN(REPLACE(?targetMotifMatchCigarP08669MF_04084323, CONCAT('^(?:[a-z]*(?:[A-Z]|-)){', STR(?step1339), '}'), '')))), '[^-]', ''))) AS ?step2340) . BIND(((?step2340 + ?targetMotifMatchRegionMatchBeginPositionMF_04084324) - 1) AS ?thisPositionOn45) . BIND(?thisPositionOn45 AS ?thisPositionOn46) . BIND(?this AS ?pfs1t341) . BIND(URI(CONCAT(STR(?thisSequence), '#position', STR(?thisPositionOn45))) AS ?pfsb43) . BIND(URI(CONCAT(STR(?thisSequence), '#position', STR(?thisPositionOn46))) AS ?pfse44) . FILTER ((SUBSTR(?thisSequenceValue, ?thisPositionOn45, 1) = 'H')) . BIND(?this AS ?pfs31) . } OPTIONAL { ?this up:sequence ?thisSequence . ?thisSequence rdf:value ?thisSequenceValue . ?templateMotifMatch346 faldo:location ?templateMotifSequenceMatchRegionP26313347 ; edam:is_output_of ?templateMotifSequenceProfileAlignmentOperationP26313349 ; rdf:type edam:data_0869 ; rdf:value ?templateMotifCigarP26313MF_04084342 . ?templateMotifSequenceMatchRegionP26313347 faldo:begin ?templateMotifSequenceMatchBeginP26313348 . ?templateMotifSequenceMatchBeginP26313348 faldo:position ?templateMotifSequenceMatchBeginPositionP26313343 ; faldo:reference isoform:P26313-1 . ?templateMotifSequenceProfileAlignmentOperationP26313349 edam:has_input signature:MF_04084 ; rdf:type edam:operation_0300 . ?targetMotifMatch350 faldo:location ?targetMotifMatchRegionMatch351 ; edam:is_output_of ?targetMotifSequenceAlignmentOperationMF_04084353 ; rdf:type edam:data_0869 ; rdf:value ?targetMotifMatchCigarP26313MF_04084344 . ?targetMotifMatchRegionMatch351 faldo:begin ?targetMotifMatchRegionMatchBeginMF_04084352 . ?targetMotifMatchRegionMatchBeginMF_04084352 faldo:position ?targetMotifMatchRegionMatchBeginPositionMF_04084345 ; faldo:reference ?thisSequence . ?targetMotifSequenceAlignmentOperationMF_04084353 edam:has_input signature:MF_04084 ; rdf:type edam:operation_0300 . BIND(STRLEN(REPLACE(SUBSTR(?templateMotifCigarP26313MF_04084342, 1, (STRLEN(?templateMotifCigarP26313MF_04084342) - STRLEN(REPLACE(?templateMotifCigarP26313MF_04084342, CONCAT('^(?:-*[^-]){', STR(((57 - ?templateMotifSequenceMatchBeginPositionP26313343) + 1)), '}'), '')))), '[a-z]', '')) AS ?step1354) . BIND((STRLEN(SUBSTR(?targetMotifMatchCigarP26313MF_04084344, 1, (STRLEN(?targetMotifMatchCigarP26313MF_04084344) - STRLEN(REPLACE(?targetMotifMatchCigarP26313MF_04084344, CONCAT('^(?:[a-z]*(?:[A-Z]|-)){', STR(?step1354), '}'), ''))))) - STRLEN(REPLACE(SUBSTR(?targetMotifMatchCigarP26313MF_04084344, 1, (STRLEN(?targetMotifMatchCigarP26313MF_04084344) - STRLEN(REPLACE(?targetMotifMatchCigarP26313MF_04084344, CONCAT('^(?:[a-z]*(?:[A-Z]|-)){', STR(?step1354), '}'), '')))), '[^-]', ''))) AS ?step2355) . BIND(((?step2355 + ?targetMotifMatchRegionMatchBeginPositionMF_04084345) - 1) AS ?thisPositionOn52) . BIND(?thisPositionOn52 AS ?thisPositionOn53) . BIND(?this AS ?pfs2t356) . BIND(URI(CONCAT(STR(?thisSequence), '#position', STR(?thisPositionOn52))) AS ?pfsb49) . BIND(URI(CONCAT(STR(?thisSequence), '#position', STR(?thisPositionOn53))) AS ?pfse50) . FILTER ((SUBSTR(?thisSequenceValue, ?thisPositionOn52, 1) = 'C')) . BIND(URI(CONCAT(STR(?this), '#MF_04084a48')) AS ?annotation48) . BIND(?this AS ?pfs47) . } OPTIONAL { ?this up:sequence ?thisSequence . ?thisSequence rdf:value ?thisSequenceValue . ?templateMotifMatch361 faldo:location ?templateMotifSequenceMatchRegionP26313362 ; edam:is_output_of ?templateMotifSequenceProfileAlignmentOperationP26313364 ; rdf:type edam:data_0869 ; rdf:value ?templateMotifCigarP26313MF_04084357 . ?templateMotifSequenceMatchRegionP26313362 faldo:begin ?templateMotifSequenceMatchBeginP26313363 . ?templateMotifSequenceMatchBeginP26313363 faldo:position ?templateMotifSequenceMatchBeginPositionP26313358 ; faldo:reference isoform:P26313-1 . ?templateMotifSequenceProfileAlignmentOperationP26313364 edam:has_input signature:MF_04084 ; rdf:type edam:operation_0300 . ?targetMotifMatch365 faldo:location ?targetMotifMatchRegionMatch366 ; edam:is_output_of ?targetMotifSequenceAlignmentOperationMF_04084368 ; rdf:type edam:data_0869 ; rdf:value ?targetMotifMatchCigarP26313MF_04084359 . ?targetMotifMatchRegionMatch366 faldo:begin ?targetMotifMatchRegionMatchBeginMF_04084367 . ?targetMotifMatchRegionMatchBeginMF_04084367 faldo:position ?targetMotifMatchRegionMatchBeginPositionMF_04084360 ; faldo:reference ?thisSequence . ?targetMotifSequenceAlignmentOperationMF_04084368 edam:has_input signature:MF_04084 ; rdf:type edam:operation_0300 . BIND(STRLEN(REPLACE(SUBSTR(?templateMotifCigarP26313MF_04084357, 1, (STRLEN(?templateMotifCigarP26313MF_04084357) - STRLEN(REPLACE(?templateMotifCigarP26313MF_04084357, CONCAT('^(?:-*[^-]){', STR(((447 - ?templateMotifSequenceMatchBeginPositionP26313358) + 1)), '}'), '')))), '[a-z]', '')) AS ?step1369) . BIND((STRLEN(SUBSTR(?targetMotifMatchCigarP26313MF_04084359, 1, (STRLEN(?targetMotifMatchCigarP26313MF_04084359) - STRLEN(REPLACE(?targetMotifMatchCigarP26313MF_04084359, CONCAT('^(?:[a-z]*(?:[A-Z]|-)){', STR(?step1369), '}'), ''))))) - STRLEN(REPLACE(SUBSTR(?targetMotifMatchCigarP26313MF_04084359, 1, (STRLEN(?targetMotifMatchCigarP26313MF_04084359) - STRLEN(REPLACE(?targetMotifMatchCigarP26313MF_04084359, CONCAT('^(?:[a-z]*(?:[A-Z]|-)){', STR(?step1369), '}'), '')))), '[^-]', ''))) AS ?step2370) . BIND(((?step2370 + ?targetMotifMatchRegionMatchBeginPositionMF_04084360) - 1) AS ?thisPositionOn59) . BIND(?thisPositionOn59 AS ?thisPositionOn60) . BIND(?this AS ?pfs2t371) . BIND(URI(CONCAT(STR(?thisSequence), '#position', STR(?thisPositionOn59))) AS ?pfsb56) . BIND(URI(CONCAT(STR(?thisSequence), '#position', STR(?thisPositionOn60))) AS ?pfse57) . FILTER ((SUBSTR(?thisSequenceValue, ?thisPositionOn59, 1) = 'H')) . BIND(URI(CONCAT(STR(?this), '#MF_04084a55')) AS ?annotation55) . BIND(?this AS ?pfs54) . } OPTIONAL { ?this up:sequence ?thisSequence . ?thisSequence rdf:value ?thisSequenceValue . ?templateMotifMatch376 faldo:location ?templateMotifSequenceMatchRegionP26313377 ; edam:is_output_of ?templateMotifSequenceProfileAlignmentOperationP26313379 ; rdf:type edam:data_0869 ; rdf:value ?templateMotifCigarP26313MF_04084372 . ?templateMotifSequenceMatchRegionP26313377 faldo:begin ?templateMotifSequenceMatchBeginP26313378 . ?templateMotifSequenceMatchBeginP26313378 faldo:position ?templateMotifSequenceMatchBeginPositionP26313373 ; faldo:reference isoform:P26313-1 . ?templateMotifSequenceProfileAlignmentOperationP26313379 edam:has_input signature:MF_04084 ; rdf:type edam:operation_0300 . ?targetMotifMatch380 faldo:location ?targetMotifMatchRegionMatch381 ; edam:is_output_of ?targetMotifSequenceAlignmentOperationMF_04084383 ; rdf:type edam:data_0869 ; rdf:value ?targetMotifMatchCigarP26313MF_04084374 . ?targetMotifMatchRegionMatch381 faldo:begin ?targetMotifMatchRegionMatchBeginMF_04084382 . ?targetMotifMatchRegionMatchBeginMF_04084382 faldo:position ?targetMotifMatchRegionMatchBeginPositionMF_04084375 ; faldo:reference ?thisSequence . ?targetMotifSequenceAlignmentOperationMF_04084383 edam:has_input signature:MF_04084 ; rdf:type edam:operation_0300 . BIND(STRLEN(REPLACE(SUBSTR(?templateMotifCigarP26313MF_04084372, 1, (STRLEN(?templateMotifCigarP26313MF_04084372) - STRLEN(REPLACE(?templateMotifCigarP26313MF_04084372, CONCAT('^(?:-*[^-]){', STR(((449 - ?templateMotifSequenceMatchBeginPositionP26313373) + 1)), '}'), '')))), '[a-z]', '')) AS ?step1384) . BIND((STRLEN(SUBSTR(?targetMotifMatchCigarP26313MF_04084374, 1, (STRLEN(?targetMotifMatchCigarP26313MF_04084374) - STRLEN(REPLACE(?targetMotifMatchCigarP26313MF_04084374, CONCAT('^(?:[a-z]*(?:[A-Z]|-)){', STR(?step1384), '}'), ''))))) - STRLEN(REPLACE(SUBSTR(?targetMotifMatchCigarP26313MF_04084374, 1, (STRLEN(?targetMotifMatchCigarP26313MF_04084374) - STRLEN(REPLACE(?targetMotifMatchCigarP26313MF_04084374, CONCAT('^(?:[a-z]*(?:[A-Z]|-)){', STR(?step1384), '}'), '')))), '[^-]', ''))) AS ?step2385) . BIND(((?step2385 + ?targetMotifMatchRegionMatchBeginPositionMF_04084375) - 1) AS ?thisPositionOn66) . BIND(?thisPositionOn66 AS ?thisPositionOn67) . BIND(?this AS ?pfs2t386) . BIND(URI(CONCAT(STR(?thisSequence), '#position', STR(?thisPositionOn66))) AS ?pfsb63) . BIND(URI(CONCAT(STR(?thisSequence), '#position', STR(?thisPositionOn67))) AS ?pfse64) . FILTER ((SUBSTR(?thisSequenceValue, ?thisPositionOn66, 1) = 'H')) . BIND(URI(CONCAT(STR(?this), '#MF_04084a62')) AS ?annotation62) . BIND(?this AS ?pfs61) . } OPTIONAL { ?this up:sequence ?thisSequence . ?thisSequence rdf:value ?thisSequenceValue . ?templateMotifMatch391 faldo:location ?templateMotifSequenceMatchRegionP26313392 ; edam:is_output_of ?templateMotifSequenceProfileAlignmentOperationP26313394 ; rdf:type edam:data_0869 ; rdf:value ?templateMotifCigarP26313MF_04084387 . ?templateMotifSequenceMatchRegionP26313392 faldo:begin ?templateMotifSequenceMatchBeginP26313393 . ?templateMotifSequenceMatchBeginP26313393 faldo:position ?templateMotifSequenceMatchBeginPositionP26313388 ; faldo:reference isoform:P26313-1 . ?templateMotifSequenceProfileAlignmentOperationP26313394 edam:has_input signature:MF_04084 ; rdf:type edam:operation_0300 . ?targetMotifMatch395 faldo:location ?targetMotifMatchRegionMatch396 ; edam:is_output_of ?targetMotifSequenceAlignmentOperationMF_04084398 ; rdf:type edam:data_0869 ; rdf:value ?targetMotifMatchCigarP26313MF_04084389 . ?targetMotifMatchRegionMatch396 faldo:begin ?targetMotifMatchRegionMatchBeginMF_04084397 . ?targetMotifMatchRegionMatchBeginMF_04084397 faldo:position ?targetMotifMatchRegionMatchBeginPositionMF_04084390 ; faldo:reference ?thisSequence . ?targetMotifSequenceAlignmentOperationMF_04084398 edam:has_input signature:MF_04084 ; rdf:type edam:operation_0300 . BIND(STRLEN(REPLACE(SUBSTR(?templateMotifCigarP26313MF_04084387, 1, (STRLEN(?templateMotifCigarP26313MF_04084387) - STRLEN(REPLACE(?templateMotifCigarP26313MF_04084387, CONCAT('^(?:-*[^-]){', STR(((455 - ?templateMotifSequenceMatchBeginPositionP26313388) + 1)), '}'), '')))), '[a-z]', '')) AS ?step1399) . BIND((STRLEN(SUBSTR(?targetMotifMatchCigarP26313MF_04084389, 1, (STRLEN(?targetMotifMatchCigarP26313MF_04084389) - STRLEN(REPLACE(?targetMotifMatchCigarP26313MF_04084389, CONCAT('^(?:[a-z]*(?:[A-Z]|-)){', STR(?step1399), '}'), ''))))) - STRLEN(REPLACE(SUBSTR(?targetMotifMatchCigarP26313MF_04084389, 1, (STRLEN(?targetMotifMatchCigarP26313MF_04084389) - STRLEN(REPLACE(?targetMotifMatchCigarP26313MF_04084389, CONCAT('^(?:[a-z]*(?:[A-Z]|-)){', STR(?step1399), '}'), '')))), '[^-]', ''))) AS ?step2400) . BIND(((?step2400 + ?targetMotifMatchRegionMatchBeginPositionMF_04084390) - 1) AS ?thisPositionOn73) . BIND(?thisPositionOn73 AS ?thisPositionOn74) . BIND(?this AS ?pfs2t401) . BIND(URI(CONCAT(STR(?thisSequence), '#position', STR(?thisPositionOn73))) AS ?pfsb70) . BIND(URI(CONCAT(STR(?thisSequence), '#position', STR(?thisPositionOn74))) AS ?pfse71) . FILTER ((SUBSTR(?thisSequenceValue, ?thisPositionOn73, 1) = 'C')) . BIND(URI(CONCAT(STR(?this), '#MF_04084a69')) AS ?annotation69) . BIND(?this AS ?pfs68) . } OPTIONAL { ?this up:sequence ?thisSequence . ?thisSequence rdf:value ?thisSequenceValue . ?templateMotifMatch406 faldo:location ?templateMotifSequenceMatchRegionP26313407 ; edam:is_output_of ?templateMotifSequenceProfileAlignmentOperationP26313409 ; rdf:type edam:data_0869 ; rdf:value ?templateMotifCigarP26313MF_04084402 . ?templateMotifSequenceMatchRegionP26313407 faldo:begin ?templateMotifSequenceMatchBeginP26313408 . ?templateMotifSequenceMatchBeginP26313408 faldo:position ?templateMotifSequenceMatchBeginPositionP26313403 ; faldo:reference isoform:P26313-1 . ?templateMotifSequenceProfileAlignmentOperationP26313409 edam:has_input signature:MF_04084 ; rdf:type edam:operation_0300 . ?targetMotifMatch410 faldo:location ?targetMotifMatchRegionMatch411 ; edam:is_output_of ?targetMotifSequenceAlignmentOperationMF_04084413 ; rdf:type edam:data_0869 ; rdf:value ?targetMotifMatchCigarP26313MF_04084404 . ?targetMotifMatchRegionMatch411 faldo:begin ?targetMotifMatchRegionMatchBeginMF_04084412 . ?targetMotifMatchRegionMatchBeginMF_04084412 faldo:position ?targetMotifMatchRegionMatchBeginPositionMF_04084405 ; faldo:reference ?thisSequence . ?targetMotifSequenceAlignmentOperationMF_04084413 edam:has_input signature:MF_04084 ; rdf:type edam:operation_0300 . BIND(STRLEN(REPLACE(SUBSTR(?templateMotifCigarP26313MF_04084402, 1, (STRLEN(?templateMotifCigarP26313MF_04084402) - STRLEN(REPLACE(?templateMotifCigarP26313MF_04084402, CONCAT('^(?:-*[^-]){', STR(((459 - ?templateMotifSequenceMatchBeginPositionP26313403) + 1)), '}'), '')))), '[a-z]', '')) AS ?step1414) . BIND((STRLEN(SUBSTR(?targetMotifMatchCigarP26313MF_04084404, 1, (STRLEN(?targetMotifMatchCigarP26313MF_04084404) - STRLEN(REPLACE(?targetMotifMatchCigarP26313MF_04084404, CONCAT('^(?:[a-z]*(?:[A-Z]|-)){', STR(?step1414), '}'), ''))))) - STRLEN(REPLACE(SUBSTR(?targetMotifMatchCigarP26313MF_04084404, 1, (STRLEN(?targetMotifMatchCigarP26313MF_04084404) - STRLEN(REPLACE(?targetMotifMatchCigarP26313MF_04084404, CONCAT('^(?:[a-z]*(?:[A-Z]|-)){', STR(?step1414), '}'), '')))), '[^-]', ''))) AS ?step2415) . BIND(((?step2415 + ?targetMotifMatchRegionMatchBeginPositionMF_04084405) - 1) AS ?thisPositionOn80) . BIND(?thisPositionOn80 AS ?thisPositionOn81) . BIND(?this AS ?pfs2t416) . BIND(URI(CONCAT(STR(?thisSequence), '#position', STR(?thisPositionOn80))) AS ?pfsb77) . BIND(URI(CONCAT(STR(?thisSequence), '#position', STR(?thisPositionOn81))) AS ?pfse78) . FILTER ((SUBSTR(?thisSequenceValue, ?thisPositionOn80, 1) = 'H')) . BIND(URI(CONCAT(STR(?this), '#MF_04084a76')) AS ?annotation76) . BIND(?this AS ?pfs75) . } OPTIONAL { ?this up:sequence ?thisSequence . ?thisSequence rdf:value ?thisSequenceValue . ?templateMotifMatch421 faldo:location ?templateMotifSequenceMatchRegionP26313422 ; edam:is_output_of ?templateMotifSequenceProfileAlignmentOperationP26313424 ; rdf:type edam:data_0869 ; rdf:value ?templateMotifCigarP26313MF_04084417 . ?templateMotifSequenceMatchRegionP26313422 faldo:begin ?templateMotifSequenceMatchBeginP26313423 . ?templateMotifSequenceMatchBeginP26313423 faldo:position ?templateMotifSequenceMatchBeginPositionP26313418 ; faldo:reference isoform:P26313-1 . ?templateMotifSequenceProfileAlignmentOperationP26313424 edam:has_input signature:MF_04084 ; rdf:type edam:operation_0300 . ?targetMotifMatch425 faldo:location ?targetMotifMatchRegionMatch426 ; edam:is_output_of ?targetMotifSequenceAlignmentOperationMF_04084428 ; rdf:type edam:data_0869 ; rdf:value ?targetMotifMatchCigarP26313MF_04084419 . ?targetMotifMatchRegionMatch426 faldo:begin ?targetMotifMatchRegionMatchBeginMF_04084427 . ?targetMotifMatchRegionMatchBeginMF_04084427 faldo:position ?targetMotifMatchRegionMatchBeginPositionMF_04084420 ; faldo:reference ?thisSequence . ?targetMotifSequenceAlignmentOperationMF_04084428 edam:has_input signature:MF_04084 ; rdf:type edam:operation_0300 . BIND(STRLEN(REPLACE(SUBSTR(?templateMotifCigarP26313MF_04084417, 1, (STRLEN(?templateMotifCigarP26313MF_04084417) - STRLEN(REPLACE(?templateMotifCigarP26313MF_04084417, CONCAT('^(?:-*[^-]){', STR(((467 - ?templateMotifSequenceMatchBeginPositionP26313418) + 1)), '}'), '')))), '[a-z]', '')) AS ?step1429) . BIND((STRLEN(SUBSTR(?targetMotifMatchCigarP26313MF_04084419, 1, (STRLEN(?targetMotifMatchCigarP26313MF_04084419) - STRLEN(REPLACE(?targetMotifMatchCigarP26313MF_04084419, CONCAT('^(?:[a-z]*(?:[A-Z]|-)){', STR(?step1429), '}'), ''))))) - STRLEN(REPLACE(SUBSTR(?targetMotifMatchCigarP26313MF_04084419, 1, (STRLEN(?targetMotifMatchCigarP26313MF_04084419) - STRLEN(REPLACE(?targetMotifMatchCigarP26313MF_04084419, CONCAT('^(?:[a-z]*(?:[A-Z]|-)){', STR(?step1429), '}'), '')))), '[^-]', ''))) AS ?step2430) . BIND(((?step2430 + ?targetMotifMatchRegionMatchBeginPositionMF_04084420) - 1) AS ?thisPositionOn87) . BIND(?thisPositionOn87 AS ?thisPositionOn88) . BIND(?this AS ?pfs2t431) . BIND(URI(CONCAT(STR(?thisSequence), '#position', STR(?thisPositionOn87))) AS ?pfsb84) . BIND(URI(CONCAT(STR(?thisSequence), '#position', STR(?thisPositionOn88))) AS ?pfse85) . FILTER ((SUBSTR(?thisSequenceValue, ?thisPositionOn87, 1) = 'C')) . BIND(URI(CONCAT(STR(?this), '#MF_04084a83')) AS ?annotation83) . BIND(?this AS ?pfs82) . } OPTIONAL { ?this up:sequence ?thisSequence . ?thisSequence rdf:value ?thisSequenceValue . ?templateMotifMatch436 faldo:location ?templateMotifSequenceMatchRegionP26313437 ; edam:is_output_of ?templateMotifSequenceProfileAlignmentOperationP26313439 ; rdf:type edam:data_0869 ; rdf:value ?templateMotifCigarP26313MF_04084432 . ?templateMotifSequenceMatchRegionP26313437 faldo:begin ?templateMotifSequenceMatchBeginP26313438 . ?templateMotifSequenceMatchBeginP26313438 faldo:position ?templateMotifSequenceMatchBeginPositionP26313433 ; faldo:reference isoform:P26313-1 . ?templateMotifSequenceProfileAlignmentOperationP26313439 edam:has_input signature:MF_04084 ; rdf:type edam:operation_0300 . ?targetMotifMatch440 faldo:location ?targetMotifMatchRegionMatch441 ; edam:is_output_of ?targetMotifSequenceAlignmentOperationMF_04084443 ; rdf:type edam:data_0869 ; rdf:value ?targetMotifMatchCigarP26313MF_04084434 . ?targetMotifMatchRegionMatch441 faldo:begin ?targetMotifMatchRegionMatchBeginMF_04084442 . ?targetMotifMatchRegionMatchBeginMF_04084442 faldo:position ?targetMotifMatchRegionMatchBeginPositionMF_04084435 ; faldo:reference ?thisSequence . ?targetMotifSequenceAlignmentOperationMF_04084443 edam:has_input signature:MF_04084 ; rdf:type edam:operation_0300 . BIND(STRLEN(REPLACE(SUBSTR(?templateMotifCigarP26313MF_04084432, 1, (STRLEN(?templateMotifCigarP26313MF_04084432) - STRLEN(REPLACE(?templateMotifCigarP26313MF_04084432, CONCAT('^(?:-*[^-]){', STR(((469 - ?templateMotifSequenceMatchBeginPositionP26313433) + 1)), '}'), '')))), '[a-z]', '')) AS ?step1444) . BIND((STRLEN(SUBSTR(?targetMotifMatchCigarP26313MF_04084434, 1, (STRLEN(?targetMotifMatchCigarP26313MF_04084434) - STRLEN(REPLACE(?targetMotifMatchCigarP26313MF_04084434, CONCAT('^(?:[a-z]*(?:[A-Z]|-)){', STR(?step1444), '}'), ''))))) - STRLEN(REPLACE(SUBSTR(?targetMotifMatchCigarP26313MF_04084434, 1, (STRLEN(?targetMotifMatchCigarP26313MF_04084434) - STRLEN(REPLACE(?targetMotifMatchCigarP26313MF_04084434, CONCAT('^(?:[a-z]*(?:[A-Z]|-)){', STR(?step1444), '}'), '')))), '[^-]', ''))) AS ?step2445) . BIND(((?step2445 + ?targetMotifMatchRegionMatchBeginPositionMF_04084435) - 1) AS ?thisPositionOn94) . BIND(?thisPositionOn94 AS ?thisPositionOn95) . BIND(?this AS ?pfs2t446) . BIND(URI(CONCAT(STR(?thisSequence), '#position', STR(?thisPositionOn94))) AS ?pfsb91) . BIND(URI(CONCAT(STR(?thisSequence), '#position', STR(?thisPositionOn95))) AS ?pfse92) . FILTER ((SUBSTR(?thisSequenceValue, ?thisPositionOn94, 1) = 'C')) . BIND(URI(CONCAT(STR(?this), '#MF_04084a90')) AS ?annotation90) . BIND(?this AS ?pfs89) . } OPTIONAL { ?this up:sequence ?thisSequence . ?thisSequence rdf:value ?thisSequenceValue . ?templateMotifMatch451 faldo:location ?templateMotifSequenceMatchRegionP26313452 ; edam:is_output_of ?templateMotifSequenceProfileAlignmentOperationP26313454 ; rdf:type edam:data_0869 ; rdf:value ?templateMotifCigarP26313MF_04084447 . ?templateMotifSequenceMatchRegionP26313452 faldo:begin ?templateMotifSequenceMatchBeginP26313453 . ?templateMotifSequenceMatchBeginP26313453 faldo:position ?templateMotifSequenceMatchBeginPositionP26313448 ; faldo:reference isoform:P26313-1 . ?templateMotifSequenceProfileAlignmentOperationP26313454 edam:has_input signature:MF_04084 ; rdf:type edam:operation_0300 . ?targetMotifMatch455 faldo:location ?targetMotifMatchRegionMatch456 ; edam:is_output_of ?targetMotifSequenceAlignmentOperationMF_04084458 ; rdf:type edam:data_0869 ; rdf:value ?targetMotifMatchCigarP26313MF_04084449 . ?targetMotifMatchRegionMatch456 faldo:begin ?targetMotifMatchRegionMatchBeginMF_04084457 . ?targetMotifMatchRegionMatchBeginMF_04084457 faldo:position ?targetMotifMatchRegionMatchBeginPositionMF_04084450 ; faldo:reference ?thisSequence . ?targetMotifSequenceAlignmentOperationMF_04084458 edam:has_input signature:MF_04084 ; rdf:type edam:operation_0300 . BIND(STRLEN(REPLACE(SUBSTR(?templateMotifCigarP26313MF_04084447, 1, (STRLEN(?templateMotifCigarP26313MF_04084447) - STRLEN(REPLACE(?templateMotifCigarP26313MF_04084447, CONCAT('^(?:-*[^-]){', STR(((485 - ?templateMotifSequenceMatchBeginPositionP26313448) + 1)), '}'), '')))), '[a-z]', '')) AS ?step1459) . BIND((STRLEN(SUBSTR(?targetMotifMatchCigarP26313MF_04084449, 1, (STRLEN(?targetMotifMatchCigarP26313MF_04084449) - STRLEN(REPLACE(?targetMotifMatchCigarP26313MF_04084449, CONCAT('^(?:[a-z]*(?:[A-Z]|-)){', STR(?step1459), '}'), ''))))) - STRLEN(REPLACE(SUBSTR(?targetMotifMatchCigarP26313MF_04084449, 1, (STRLEN(?targetMotifMatchCigarP26313MF_04084449) - STRLEN(REPLACE(?targetMotifMatchCigarP26313MF_04084449, CONCAT('^(?:[a-z]*(?:[A-Z]|-)){', STR(?step1459), '}'), '')))), '[^-]', ''))) AS ?step2460) . BIND(((?step2460 + ?targetMotifMatchRegionMatchBeginPositionMF_04084450) - 1) AS ?thisPositionOn101) . BIND(?thisPositionOn101 AS ?thisPositionOn102) . BIND(?this AS ?pfs2t461) . BIND(URI(CONCAT(STR(?thisSequence), '#position', STR(?thisPositionOn101))) AS ?pfsb98) . BIND(URI(CONCAT(STR(?thisSequence), '#position', STR(?thisPositionOn102))) AS ?pfse99) . FILTER ((SUBSTR(?thisSequenceValue, ?thisPositionOn101, 1) = 'H')) . BIND(URI(CONCAT(STR(?this), '#MF_04084a97')) AS ?annotation97) . BIND(?this AS ?pfs96) . } OPTIONAL { ?this up:sequence ?thisSequence . ?thisSequence rdf:value ?thisSequenceValue . ?templateMotifMatch466 faldo:location ?templateMotifSequenceMatchRegionP08669467 ; edam:is_output_of ?templateMotifSequenceProfileAlignmentOperationP08669469 ; rdf:type edam:data_0869 ; rdf:value ?templateMotifCigarP08669MF_04084462 . ?templateMotifSequenceMatchRegionP08669467 faldo:begin ?templateMotifSequenceMatchBeginP08669468 . ?templateMotifSequenceMatchBeginP08669468 faldo:position ?templateMotifSequenceMatchBeginPositionP08669463 ; faldo:reference isoform:P08669-1 . ?templateMotifSequenceProfileAlignmentOperationP08669469 edam:has_input signature:MF_04084 ; rdf:type edam:operation_0300 . ?targetMotifMatch470 faldo:location ?targetMotifMatchRegionMatch471 ; edam:is_output_of ?targetMotifSequenceAlignmentOperationMF_04084473 ; rdf:type edam:data_0869 ; rdf:value ?targetMotifMatchCigarP08669MF_04084464 . ?targetMotifMatchRegionMatch471 faldo:begin ?targetMotifMatchRegionMatchBeginMF_04084472 . ?targetMotifMatchRegionMatchBeginMF_04084472 faldo:position ?targetMotifMatchRegionMatchBeginPositionMF_04084465 ; faldo:reference ?thisSequence . ?targetMotifSequenceAlignmentOperationMF_04084473 edam:has_input signature:MF_04084 ; rdf:type edam:operation_0300 . BIND(STRLEN(REPLACE(SUBSTR(?templateMotifCigarP08669MF_04084462, 1, (STRLEN(?templateMotifCigarP08669MF_04084462) - STRLEN(REPLACE(?templateMotifCigarP08669MF_04084462, CONCAT('^(?:-*[^-]){', STR(((2 - ?templateMotifSequenceMatchBeginPositionP08669463) + 1)), '}'), '')))), '[a-z]', '')) AS ?step1474) . BIND((STRLEN(SUBSTR(?targetMotifMatchCigarP08669MF_04084464, 1, (STRLEN(?targetMotifMatchCigarP08669MF_04084464) - STRLEN(REPLACE(?targetMotifMatchCigarP08669MF_04084464, CONCAT('^(?:[a-z]*(?:[A-Z]|-)){', STR(?step1474), '}'), ''))))) - STRLEN(REPLACE(SUBSTR(?targetMotifMatchCigarP08669MF_04084464, 1, (STRLEN(?targetMotifMatchCigarP08669MF_04084464) - STRLEN(REPLACE(?targetMotifMatchCigarP08669MF_04084464, CONCAT('^(?:[a-z]*(?:[A-Z]|-)){', STR(?step1474), '}'), '')))), '[^-]', ''))) AS ?step2475) . BIND(((?step2475 + ?targetMotifMatchRegionMatchBeginPositionMF_04084465) - 1) AS ?thisPositionOn107) . BIND(STRLEN(?thisSequenceValue) AS ?thisPositionOn108) . BIND(?this AS ?pfs3t476) . BIND(URI(CONCAT(STR(?thisSequence), '#position', STR(?thisPositionOn107))) AS ?pfsb105) . BIND(URI(CONCAT(STR(?thisSequence), '#position', STR(?thisPositionOn108))) AS ?pfse106) . FILTER ((BOUND(?thisPositionOn107) && BOUND(?thisPositionOn108))) . BIND(URI(CONCAT(STR(?this), '#MF_04084a104')) AS ?annotation104) . BIND(?this AS ?pfs103) . } OPTIONAL { ?this up:sequence ?thisSequence . ?thisSequence rdf:value ?thisSequenceValue . ?templateMotifMatch481 faldo:location ?templateMotifSequenceMatchRegionP08669482 ; edam:is_output_of ?templateMotifSequenceProfileAlignmentOperationP08669484 ; rdf:type edam:data_0869 ; rdf:value ?templateMotifCigarP08669MF_04084477 . ?templateMotifSequenceMatchRegionP08669482 faldo:begin ?templateMotifSequenceMatchBeginP08669483 . ?templateMotifSequenceMatchBeginP08669483 faldo:position ?templateMotifSequenceMatchBeginPositionP08669478 ; faldo:reference isoform:P08669-1 . ?templateMotifSequenceProfileAlignmentOperationP08669484 edam:has_input signature:MF_04084 ; rdf:type edam:operation_0300 . ?targetMotifMatch485 faldo:location ?targetMotifMatchRegionMatch486 ; edam:is_output_of ?targetMotifSequenceAlignmentOperationMF_04084488 ; rdf:type edam:data_0869 ; rdf:value ?targetMotifMatchCigarP08669MF_04084479 . ?targetMotifMatchRegionMatch486 faldo:begin ?targetMotifMatchRegionMatchBeginMF_04084487 . ?targetMotifMatchRegionMatchBeginMF_04084487 faldo:position ?targetMotifMatchRegionMatchBeginPositionMF_04084480 ; faldo:reference ?thisSequence . ?targetMotifSequenceAlignmentOperationMF_04084488 edam:has_input signature:MF_04084 ; rdf:type edam:operation_0300 . BIND(STRLEN(REPLACE(SUBSTR(?templateMotifCigarP08669MF_04084477, 1, (STRLEN(?templateMotifCigarP08669MF_04084477) - STRLEN(REPLACE(?templateMotifCigarP08669MF_04084477, CONCAT('^(?:-*[^-]){', STR(((2 - ?templateMotifSequenceMatchBeginPositionP08669478) + 1)), '}'), '')))), '[a-z]', '')) AS ?step1489) . BIND((STRLEN(SUBSTR(?targetMotifMatchCigarP08669MF_04084479, 1, (STRLEN(?targetMotifMatchCigarP08669MF_04084479) - STRLEN(REPLACE(?targetMotifMatchCigarP08669MF_04084479, CONCAT('^(?:[a-z]*(?:[A-Z]|-)){', STR(?step1489), '}'), ''))))) - STRLEN(REPLACE(SUBSTR(?targetMotifMatchCigarP08669MF_04084479, 1, (STRLEN(?targetMotifMatchCigarP08669MF_04084479) - STRLEN(REPLACE(?targetMotifMatchCigarP08669MF_04084479, CONCAT('^(?:[a-z]*(?:[A-Z]|-)){', STR(?step1489), '}'), '')))), '[^-]', ''))) AS ?step2490) . BIND(((?step2490 + ?targetMotifMatchRegionMatchBeginPositionMF_04084480) - 1) AS ?thisPositionOn113) . BIND(STRLEN(REPLACE(SUBSTR(?templateMotifCigarP08669MF_04084477, 1, (STRLEN(?templateMotifCigarP08669MF_04084477) - STRLEN(REPLACE(?templateMotifCigarP08669MF_04084477, CONCAT('^(?:-*[^-]){', STR(((58 - ?templateMotifSequenceMatchBeginPositionP08669478) + 1)), '}'), '')))), '[a-z]', '')) AS ?step1491) . BIND((STRLEN(SUBSTR(?targetMotifMatchCigarP08669MF_04084479, 1, (STRLEN(?targetMotifMatchCigarP08669MF_04084479) - STRLEN(REPLACE(?targetMotifMatchCigarP08669MF_04084479, CONCAT('^(?:[a-z]*(?:[A-Z]|-)){', STR(?step1491), '}'), ''))))) - STRLEN(REPLACE(SUBSTR(?targetMotifMatchCigarP08669MF_04084479, 1, (STRLEN(?targetMotifMatchCigarP08669MF_04084479) - STRLEN(REPLACE(?targetMotifMatchCigarP08669MF_04084479, CONCAT('^(?:[a-z]*(?:[A-Z]|-)){', STR(?step1491), '}'), '')))), '[^-]', ''))) AS ?step2492) . BIND(((?step2492 + ?targetMotifMatchRegionMatchBeginPositionMF_04084480) - 1) AS ?thisPositionOn114) . BIND(?this AS ?pfs3t493) . BIND(URI(CONCAT(STR(?thisSequence), '#position', STR(?thisPositionOn113))) AS ?pfsb111) . BIND(URI(CONCAT(STR(?thisSequence), '#position', STR(?thisPositionOn114))) AS ?pfse112) . FILTER ((BOUND(?thisPositionOn113) && BOUND(?thisPositionOn114))) . BIND(URI(CONCAT(STR(?this), '#MF_04084a110')) AS ?annotation110) . BIND(?this AS ?pfs109) . } OPTIONAL { ?this up:sequence ?thisSequence . ?thisSequence rdf:value ?thisSequenceValue . ?templateMotifMatch498 faldo:location ?templateMotifSequenceMatchRegionP08669499 ; edam:is_output_of ?templateMotifSequenceProfileAlignmentOperationP08669501 ; rdf:type edam:data_0869 ; rdf:value ?templateMotifCigarP08669MF_04084494 . ?templateMotifSequenceMatchRegionP08669499 faldo:begin ?templateMotifSequenceMatchBeginP08669500 . ?templateMotifSequenceMatchBeginP08669500 faldo:position ?templateMotifSequenceMatchBeginPositionP08669495 ; faldo:reference isoform:P08669-1 . ?templateMotifSequenceProfileAlignmentOperationP08669501 edam:has_input signature:MF_04084 ; rdf:type edam:operation_0300 . ?targetMotifMatch502 faldo:location ?targetMotifMatchRegionMatch503 ; edam:is_output_of ?targetMotifSequenceAlignmentOperationMF_04084505 ; rdf:type edam:data_0869 ; rdf:value ?targetMotifMatchCigarP08669MF_04084496 . ?targetMotifMatchRegionMatch503 faldo:begin ?targetMotifMatchRegionMatchBeginMF_04084504 . ?targetMotifMatchRegionMatchBeginMF_04084504 faldo:position ?targetMotifMatchRegionMatchBeginPositionMF_04084497 ; faldo:reference ?thisSequence . ?targetMotifSequenceAlignmentOperationMF_04084505 edam:has_input signature:MF_04084 ; rdf:type edam:operation_0300 . BIND(STRLEN(REPLACE(SUBSTR(?templateMotifCigarP08669MF_04084494, 1, (STRLEN(?templateMotifCigarP08669MF_04084494) - STRLEN(REPLACE(?templateMotifCigarP08669MF_04084494, CONCAT('^(?:-*[^-]){', STR(((59 - ?templateMotifSequenceMatchBeginPositionP08669495) + 1)), '}'), '')))), '[a-z]', '')) AS ?step1506) . BIND((STRLEN(SUBSTR(?targetMotifMatchCigarP08669MF_04084496, 1, (STRLEN(?targetMotifMatchCigarP08669MF_04084496) - STRLEN(REPLACE(?targetMotifMatchCigarP08669MF_04084496, CONCAT('^(?:[a-z]*(?:[A-Z]|-)){', STR(?step1506), '}'), ''))))) - STRLEN(REPLACE(SUBSTR(?targetMotifMatchCigarP08669MF_04084496, 1, (STRLEN(?targetMotifMatchCigarP08669MF_04084496) - STRLEN(REPLACE(?targetMotifMatchCigarP08669MF_04084496, CONCAT('^(?:[a-z]*(?:[A-Z]|-)){', STR(?step1506), '}'), '')))), '[^-]', ''))) AS ?step2507) . BIND(((?step2507 + ?targetMotifMatchRegionMatchBeginPositionMF_04084497) - 1) AS ?thisPositionOn119) . BIND(STRLEN(REPLACE(SUBSTR(?templateMotifCigarP08669MF_04084494, 1, (STRLEN(?templateMotifCigarP08669MF_04084494) - STRLEN(REPLACE(?templateMotifCigarP08669MF_04084494, CONCAT('^(?:-*[^-]){', STR(((259 - ?templateMotifSequenceMatchBeginPositionP08669495) + 1)), '}'), '')))), '[a-z]', '')) AS ?step1508) . BIND((STRLEN(SUBSTR(?targetMotifMatchCigarP08669MF_04084496, 1, (STRLEN(?targetMotifMatchCigarP08669MF_04084496) - STRLEN(REPLACE(?targetMotifMatchCigarP08669MF_04084496, CONCAT('^(?:[a-z]*(?:[A-Z]|-)){', STR(?step1508), '}'), ''))))) - STRLEN(REPLACE(SUBSTR(?targetMotifMatchCigarP08669MF_04084496, 1, (STRLEN(?targetMotifMatchCigarP08669MF_04084496) - STRLEN(REPLACE(?targetMotifMatchCigarP08669MF_04084496, CONCAT('^(?:[a-z]*(?:[A-Z]|-)){', STR(?step1508), '}'), '')))), '[^-]', ''))) AS ?step2509) . BIND(((?step2509 + ?targetMotifMatchRegionMatchBeginPositionMF_04084497) - 1) AS ?thisPositionOn120) . BIND(?this AS ?pfs3t510) . BIND(URI(CONCAT(STR(?thisSequence), '#position', STR(?thisPositionOn119))) AS ?pfsb117) . BIND(URI(CONCAT(STR(?thisSequence), '#position', STR(?thisPositionOn120))) AS ?pfse118) . FILTER ((BOUND(?thisPositionOn119) && BOUND(?thisPositionOn120))) . BIND(URI(CONCAT(STR(?this), '#MF_04084a116')) AS ?annotation116) . BIND(?this AS ?pfs115) . } OPTIONAL { ?this up:sequence ?thisSequence . ?thisSequence rdf:value ?thisSequenceValue . ?templateMotifMatch515 faldo:location ?templateMotifSequenceMatchRegionP08669516 ; edam:is_output_of ?templateMotifSequenceProfileAlignmentOperationP08669518 ; rdf:type edam:data_0869 ; rdf:value ?templateMotifCigarP08669MF_04084511 . ?templateMotifSequenceMatchRegionP08669516 faldo:begin ?templateMotifSequenceMatchBeginP08669517 . ?templateMotifSequenceMatchBeginP08669517 faldo:position ?templateMotifSequenceMatchBeginPositionP08669512 ; faldo:reference isoform:P08669-1 . ?templateMotifSequenceProfileAlignmentOperationP08669518 edam:has_input signature:MF_04084 ; rdf:type edam:operation_0300 . ?targetMotifMatch519 faldo:location ?targetMotifMatchRegionMatch520 ; edam:is_output_of ?targetMotifSequenceAlignmentOperationMF_04084522 ; rdf:type edam:data_0869 ; rdf:value ?targetMotifMatchCigarP08669MF_04084513 . ?targetMotifMatchRegionMatch520 faldo:begin ?targetMotifMatchRegionMatchBeginMF_04084521 . ?targetMotifMatchRegionMatchBeginMF_04084521 faldo:position ?targetMotifMatchRegionMatchBeginPositionMF_04084514 ; faldo:reference ?thisSequence . ?targetMotifSequenceAlignmentOperationMF_04084522 edam:has_input signature:MF_04084 ; rdf:type edam:operation_0300 . BIND(STRLEN(REPLACE(SUBSTR(?templateMotifCigarP08669MF_04084511, 1, (STRLEN(?templateMotifCigarP08669MF_04084511) - STRLEN(REPLACE(?templateMotifCigarP08669MF_04084511, CONCAT('^(?:-*[^-]){', STR(((260 - ?templateMotifSequenceMatchBeginPositionP08669512) + 1)), '}'), '')))), '[a-z]', '')) AS ?step1523) . BIND((STRLEN(SUBSTR(?targetMotifMatchCigarP08669MF_04084513, 1, (STRLEN(?targetMotifMatchCigarP08669MF_04084513) - STRLEN(REPLACE(?targetMotifMatchCigarP08669MF_04084513, CONCAT('^(?:[a-z]*(?:[A-Z]|-)){', STR(?step1523), '}'), ''))))) - STRLEN(REPLACE(SUBSTR(?targetMotifMatchCigarP08669MF_04084513, 1, (STRLEN(?targetMotifMatchCigarP08669MF_04084513) - STRLEN(REPLACE(?targetMotifMatchCigarP08669MF_04084513, CONCAT('^(?:[a-z]*(?:[A-Z]|-)){', STR(?step1523), '}'), '')))), '[^-]', ''))) AS ?step2524) . BIND(((?step2524 + ?targetMotifMatchRegionMatchBeginPositionMF_04084514) - 1) AS ?thisPositionOn125) . BIND(STRLEN(?thisSequenceValue) AS ?thisPositionOn126) . BIND(?this AS ?pfs3t525) . BIND(URI(CONCAT(STR(?thisSequence), '#position', STR(?thisPositionOn125))) AS ?pfsb123) . BIND(URI(CONCAT(STR(?thisSequence), '#position', STR(?thisPositionOn126))) AS ?pfse124) . FILTER ((BOUND(?thisPositionOn125) && BOUND(?thisPositionOn126))) . BIND(URI(CONCAT(STR(?this), '#MF_04084a122')) AS ?annotation122) . BIND(?this AS ?pfs121) . } OPTIONAL { ?this up:sequence ?thisSequence . ?thisSequence rdf:value ?thisSequenceValue . ?templateMotifMatch530 faldo:location ?templateMotifSequenceMatchRegionP08669531 ; edam:is_output_of ?templateMotifSequenceProfileAlignmentOperationP08669533 ; rdf:type edam:data_0869 ; rdf:value ?templateMotifCigarP08669MF_04084526 . ?templateMotifSequenceMatchRegionP08669531 faldo:begin ?templateMotifSequenceMatchBeginP08669532 . ?templateMotifSequenceMatchBeginP08669532 faldo:position ?templateMotifSequenceMatchBeginPositionP08669527 ; faldo:reference isoform:P08669-1 . ?templateMotifSequenceProfileAlignmentOperationP08669533 edam:has_input signature:MF_04084 ; rdf:type edam:operation_0300 . ?targetMotifMatch534 faldo:location ?targetMotifMatchRegionMatch535 ; edam:is_output_of ?targetMotifSequenceAlignmentOperationMF_04084537 ; rdf:type edam:data_0869 ; rdf:value ?targetMotifMatchCigarP08669MF_04084528 . ?targetMotifMatchRegionMatch535 faldo:begin ?targetMotifMatchRegionMatchBeginMF_04084536 . ?targetMotifMatchRegionMatchBeginMF_04084536 faldo:position ?targetMotifMatchRegionMatchBeginPositionMF_04084529 ; faldo:reference ?thisSequence . ?targetMotifSequenceAlignmentOperationMF_04084537 edam:has_input signature:MF_04084 ; rdf:type edam:operation_0300 . BIND(STRLEN(REPLACE(SUBSTR(?templateMotifCigarP08669MF_04084526, 1, (STRLEN(?templateMotifCigarP08669MF_04084526) - STRLEN(REPLACE(?templateMotifCigarP08669MF_04084526, CONCAT('^(?:-*[^-]){', STR(((2 - ?templateMotifSequenceMatchBeginPositionP08669527) + 1)), '}'), '')))), '[a-z]', '')) AS ?step1538) . BIND((STRLEN(SUBSTR(?targetMotifMatchCigarP08669MF_04084528, 1, (STRLEN(?targetMotifMatchCigarP08669MF_04084528) - STRLEN(REPLACE(?targetMotifMatchCigarP08669MF_04084528, CONCAT('^(?:[a-z]*(?:[A-Z]|-)){', STR(?step1538), '}'), ''))))) - STRLEN(REPLACE(SUBSTR(?targetMotifMatchCigarP08669MF_04084528, 1, (STRLEN(?targetMotifMatchCigarP08669MF_04084528) - STRLEN(REPLACE(?targetMotifMatchCigarP08669MF_04084528, CONCAT('^(?:[a-z]*(?:[A-Z]|-)){', STR(?step1538), '}'), '')))), '[^-]', ''))) AS ?step2539) . BIND(((?step2539 + ?targetMotifMatchRegionMatchBeginPositionMF_04084529) - 1) AS ?thisPositionOn131) . BIND(STRLEN(REPLACE(SUBSTR(?templateMotifCigarP08669MF_04084526, 1, (STRLEN(?templateMotifCigarP08669MF_04084526) - STRLEN(REPLACE(?templateMotifCigarP08669MF_04084526, CONCAT('^(?:-*[^-]){', STR(((17 - ?templateMotifSequenceMatchBeginPositionP08669527) + 1)), '}'), '')))), '[a-z]', '')) AS ?step1540) . BIND((STRLEN(SUBSTR(?targetMotifMatchCigarP08669MF_04084528, 1, (STRLEN(?targetMotifMatchCigarP08669MF_04084528) - STRLEN(REPLACE(?targetMotifMatchCigarP08669MF_04084528, CONCAT('^(?:[a-z]*(?:[A-Z]|-)){', STR(?step1540), '}'), ''))))) - STRLEN(REPLACE(SUBSTR(?targetMotifMatchCigarP08669MF_04084528, 1, (STRLEN(?targetMotifMatchCigarP08669MF_04084528) - STRLEN(REPLACE(?targetMotifMatchCigarP08669MF_04084528, CONCAT('^(?:[a-z]*(?:[A-Z]|-)){', STR(?step1540), '}'), '')))), '[^-]', ''))) AS ?step2541) . BIND(((?step2541 + ?targetMotifMatchRegionMatchBeginPositionMF_04084529) - 1) AS ?thisPositionOn132) . BIND(?this AS ?pfs3t542) . BIND(URI(CONCAT(STR(?thisSequence), '#position', STR(?thisPositionOn131))) AS ?pfsb129) . BIND(URI(CONCAT(STR(?thisSequence), '#position', STR(?thisPositionOn132))) AS ?pfse130) . FILTER ((BOUND(?thisPositionOn131) && BOUND(?thisPositionOn132))) . BIND(URI(CONCAT(STR(?this), '#MF_04084a128')) AS ?annotation128) . BIND(?this AS ?pfs127) . } OPTIONAL { ?this up:sequence ?thisSequence . ?thisSequence rdf:value ?thisSequenceValue . ?templateMotifMatch547 faldo:location ?templateMotifSequenceMatchRegionP08669548 ; edam:is_output_of ?templateMotifSequenceProfileAlignmentOperationP08669550 ; rdf:type edam:data_0869 ; rdf:value ?templateMotifCigarP08669MF_04084543 . ?templateMotifSequenceMatchRegionP08669548 faldo:begin ?templateMotifSequenceMatchBeginP08669549 . ?templateMotifSequenceMatchBeginP08669549 faldo:position ?templateMotifSequenceMatchBeginPositionP08669544 ; faldo:reference isoform:P08669-1 . ?templateMotifSequenceProfileAlignmentOperationP08669550 edam:has_input signature:MF_04084 ; rdf:type edam:operation_0300 . ?targetMotifMatch551 faldo:location ?targetMotifMatchRegionMatch552 ; edam:is_output_of ?targetMotifSequenceAlignmentOperationMF_04084554 ; rdf:type edam:data_0869 ; rdf:value ?targetMotifMatchCigarP08669MF_04084545 . ?targetMotifMatchRegionMatch552 faldo:begin ?targetMotifMatchRegionMatchBeginMF_04084553 . ?targetMotifMatchRegionMatchBeginMF_04084553 faldo:position ?targetMotifMatchRegionMatchBeginPositionMF_04084546 ; faldo:reference ?thisSequence . ?targetMotifSequenceAlignmentOperationMF_04084554 edam:has_input signature:MF_04084 ; rdf:type edam:operation_0300 . BIND(STRLEN(REPLACE(SUBSTR(?templateMotifCigarP08669MF_04084543, 1, (STRLEN(?templateMotifCigarP08669MF_04084543) - STRLEN(REPLACE(?templateMotifCigarP08669MF_04084543, CONCAT('^(?:-*[^-]){', STR(((18 - ?templateMotifSequenceMatchBeginPositionP08669544) + 1)), '}'), '')))), '[a-z]', '')) AS ?step1555) . BIND((STRLEN(SUBSTR(?targetMotifMatchCigarP08669MF_04084545, 1, (STRLEN(?targetMotifMatchCigarP08669MF_04084545) - STRLEN(REPLACE(?targetMotifMatchCigarP08669MF_04084545, CONCAT('^(?:[a-z]*(?:[A-Z]|-)){', STR(?step1555), '}'), ''))))) - STRLEN(REPLACE(SUBSTR(?targetMotifMatchCigarP08669MF_04084545, 1, (STRLEN(?targetMotifMatchCigarP08669MF_04084545) - STRLEN(REPLACE(?targetMotifMatchCigarP08669MF_04084545, CONCAT('^(?:[a-z]*(?:[A-Z]|-)){', STR(?step1555), '}'), '')))), '[^-]', ''))) AS ?step2556) . BIND(((?step2556 + ?targetMotifMatchRegionMatchBeginPositionMF_04084546) - 1) AS ?thisPositionOn137) . BIND(STRLEN(REPLACE(SUBSTR(?templateMotifCigarP08669MF_04084543, 1, (STRLEN(?templateMotifCigarP08669MF_04084543) - STRLEN(REPLACE(?templateMotifCigarP08669MF_04084543, CONCAT('^(?:-*[^-]){', STR(((33 - ?templateMotifSequenceMatchBeginPositionP08669544) + 1)), '}'), '')))), '[a-z]', '')) AS ?step1557) . BIND((STRLEN(SUBSTR(?targetMotifMatchCigarP08669MF_04084545, 1, (STRLEN(?targetMotifMatchCigarP08669MF_04084545) - STRLEN(REPLACE(?targetMotifMatchCigarP08669MF_04084545, CONCAT('^(?:[a-z]*(?:[A-Z]|-)){', STR(?step1557), '}'), ''))))) - STRLEN(REPLACE(SUBSTR(?targetMotifMatchCigarP08669MF_04084545, 1, (STRLEN(?targetMotifMatchCigarP08669MF_04084545) - STRLEN(REPLACE(?targetMotifMatchCigarP08669MF_04084545, CONCAT('^(?:[a-z]*(?:[A-Z]|-)){', STR(?step1557), '}'), '')))), '[^-]', ''))) AS ?step2558) . BIND(((?step2558 + ?targetMotifMatchRegionMatchBeginPositionMF_04084546) - 1) AS ?thisPositionOn138) . BIND(?this AS ?pfs3t559) . BIND(URI(CONCAT(STR(?thisSequence), '#position', STR(?thisPositionOn137))) AS ?pfsb135) . BIND(URI(CONCAT(STR(?thisSequence), '#position', STR(?thisPositionOn138))) AS ?pfse136) . FILTER ((BOUND(?thisPositionOn137) && BOUND(?thisPositionOn138))) . BIND(URI(CONCAT(STR(?this), '#MF_04084a134')) AS ?annotation134) . BIND(?this AS ?pfs133) . } OPTIONAL { ?this up:sequence ?thisSequence . ?thisSequence rdf:value ?thisSequenceValue . ?templateMotifMatch564 faldo:location ?templateMotifSequenceMatchRegionP08669565 ; edam:is_output_of ?templateMotifSequenceProfileAlignmentOperationP08669567 ; rdf:type edam:data_0869 ; rdf:value ?templateMotifCigarP08669MF_04084560 . ?templateMotifSequenceMatchRegionP08669565 faldo:begin ?templateMotifSequenceMatchBeginP08669566 . ?templateMotifSequenceMatchBeginP08669566 faldo:position ?templateMotifSequenceMatchBeginPositionP08669561 ; faldo:reference isoform:P08669-1 . ?templateMotifSequenceProfileAlignmentOperationP08669567 edam:has_input signature:MF_04084 ; rdf:type edam:operation_0300 . ?targetMotifMatch568 faldo:location ?targetMotifMatchRegionMatch569 ; edam:is_output_of ?targetMotifSequenceAlignmentOperationMF_04084571 ; rdf:type edam:data_0869 ; rdf:value ?targetMotifMatchCigarP08669MF_04084562 . ?targetMotifMatchRegionMatch569 faldo:begin ?targetMotifMatchRegionMatchBeginMF_04084570 . ?targetMotifMatchRegionMatchBeginMF_04084570 faldo:position ?targetMotifMatchRegionMatchBeginPositionMF_04084563 ; faldo:reference ?thisSequence . ?targetMotifSequenceAlignmentOperationMF_04084571 edam:has_input signature:MF_04084 ; rdf:type edam:operation_0300 . BIND(STRLEN(REPLACE(SUBSTR(?templateMotifCigarP08669MF_04084560, 1, (STRLEN(?templateMotifCigarP08669MF_04084560) - STRLEN(REPLACE(?templateMotifCigarP08669MF_04084560, CONCAT('^(?:-*[^-]){', STR(((34 - ?templateMotifSequenceMatchBeginPositionP08669561) + 1)), '}'), '')))), '[a-z]', '')) AS ?step1572) . BIND((STRLEN(SUBSTR(?targetMotifMatchCigarP08669MF_04084562, 1, (STRLEN(?targetMotifMatchCigarP08669MF_04084562) - STRLEN(REPLACE(?targetMotifMatchCigarP08669MF_04084562, CONCAT('^(?:[a-z]*(?:[A-Z]|-)){', STR(?step1572), '}'), ''))))) - STRLEN(REPLACE(SUBSTR(?targetMotifMatchCigarP08669MF_04084562, 1, (STRLEN(?targetMotifMatchCigarP08669MF_04084562) - STRLEN(REPLACE(?targetMotifMatchCigarP08669MF_04084562, CONCAT('^(?:[a-z]*(?:[A-Z]|-)){', STR(?step1572), '}'), '')))), '[^-]', ''))) AS ?step2573) . BIND(((?step2573 + ?targetMotifMatchRegionMatchBeginPositionMF_04084563) - 1) AS ?thisPositionOn143) . BIND(STRLEN(REPLACE(SUBSTR(?templateMotifCigarP08669MF_04084560, 1, (STRLEN(?templateMotifCigarP08669MF_04084560) - STRLEN(REPLACE(?templateMotifCigarP08669MF_04084560, CONCAT('^(?:-*[^-]){', STR(((58 - ?templateMotifSequenceMatchBeginPositionP08669561) + 1)), '}'), '')))), '[a-z]', '')) AS ?step1574) . BIND((STRLEN(SUBSTR(?targetMotifMatchCigarP08669MF_04084562, 1, (STRLEN(?targetMotifMatchCigarP08669MF_04084562) - STRLEN(REPLACE(?targetMotifMatchCigarP08669MF_04084562, CONCAT('^(?:[a-z]*(?:[A-Z]|-)){', STR(?step1574), '}'), ''))))) - STRLEN(REPLACE(SUBSTR(?targetMotifMatchCigarP08669MF_04084562, 1, (STRLEN(?targetMotifMatchCigarP08669MF_04084562) - STRLEN(REPLACE(?targetMotifMatchCigarP08669MF_04084562, CONCAT('^(?:[a-z]*(?:[A-Z]|-)){', STR(?step1574), '}'), '')))), '[^-]', ''))) AS ?step2575) . BIND(((?step2575 + ?targetMotifMatchRegionMatchBeginPositionMF_04084563) - 1) AS ?thisPositionOn144) . BIND(?this AS ?pfs3t576) . BIND(URI(CONCAT(STR(?thisSequence), '#position', STR(?thisPositionOn143))) AS ?pfsb141) . BIND(URI(CONCAT(STR(?thisSequence), '#position', STR(?thisPositionOn144))) AS ?pfse142) . FILTER ((BOUND(?thisPositionOn143) && BOUND(?thisPositionOn144))) . BIND(URI(CONCAT(STR(?this), '#MF_04084a140')) AS ?annotation140) . BIND(?this AS ?pfs139) . } OPTIONAL { ?this up:sequence ?thisSequence . ?thisSequence rdf:value ?thisSequenceValue . ?templateMotifMatch581 faldo:location ?templateMotifSequenceMatchRegionP08669582 ; edam:is_output_of ?templateMotifSequenceProfileAlignmentOperationP08669584 ; rdf:type edam:data_0869 ; rdf:value ?templateMotifCigarP08669MF_04084577 . ?templateMotifSequenceMatchRegionP08669582 faldo:begin ?templateMotifSequenceMatchBeginP08669583 . ?templateMotifSequenceMatchBeginP08669583 faldo:position ?templateMotifSequenceMatchBeginPositionP08669578 ; faldo:reference isoform:P08669-1 . ?templateMotifSequenceProfileAlignmentOperationP08669584 edam:has_input signature:MF_04084 ; rdf:type edam:operation_0300 . ?targetMotifMatch585 faldo:location ?targetMotifMatchRegionMatch586 ; edam:is_output_of ?targetMotifSequenceAlignmentOperationMF_04084588 ; rdf:type edam:data_0869 ; rdf:value ?targetMotifMatchCigarP08669MF_04084579 . ?targetMotifMatchRegionMatch586 faldo:begin ?targetMotifMatchRegionMatchBeginMF_04084587 . ?targetMotifMatchRegionMatchBeginMF_04084587 faldo:position ?targetMotifMatchRegionMatchBeginPositionMF_04084580 ; faldo:reference ?thisSequence . ?targetMotifSequenceAlignmentOperationMF_04084588 edam:has_input signature:MF_04084 ; rdf:type edam:operation_0300 . BIND(STRLEN(REPLACE(SUBSTR(?templateMotifCigarP08669MF_04084577, 1, (STRLEN(?templateMotifCigarP08669MF_04084577) - STRLEN(REPLACE(?templateMotifCigarP08669MF_04084577, CONCAT('^(?:-*[^-]){', STR(((59 - ?templateMotifSequenceMatchBeginPositionP08669578) + 1)), '}'), '')))), '[a-z]', '')) AS ?step1589) . BIND((STRLEN(SUBSTR(?targetMotifMatchCigarP08669MF_04084579, 1, (STRLEN(?targetMotifMatchCigarP08669MF_04084579) - STRLEN(REPLACE(?targetMotifMatchCigarP08669MF_04084579, CONCAT('^(?:[a-z]*(?:[A-Z]|-)){', STR(?step1589), '}'), ''))))) - STRLEN(REPLACE(SUBSTR(?targetMotifMatchCigarP08669MF_04084579, 1, (STRLEN(?targetMotifMatchCigarP08669MF_04084579) - STRLEN(REPLACE(?targetMotifMatchCigarP08669MF_04084579, CONCAT('^(?:[a-z]*(?:[A-Z]|-)){', STR(?step1589), '}'), '')))), '[^-]', ''))) AS ?step2590) . BIND(((?step2590 + ?targetMotifMatchRegionMatchBeginPositionMF_04084580) - 1) AS ?thisPositionOn149) . BIND(STRLEN(REPLACE(SUBSTR(?templateMotifCigarP08669MF_04084577, 1, (STRLEN(?templateMotifCigarP08669MF_04084577) - STRLEN(REPLACE(?templateMotifCigarP08669MF_04084577, CONCAT('^(?:-*[^-]){', STR(((432 - ?templateMotifSequenceMatchBeginPositionP08669578) + 1)), '}'), '')))), '[a-z]', '')) AS ?step1591) . BIND((STRLEN(SUBSTR(?targetMotifMatchCigarP08669MF_04084579, 1, (STRLEN(?targetMotifMatchCigarP08669MF_04084579) - STRLEN(REPLACE(?targetMotifMatchCigarP08669MF_04084579, CONCAT('^(?:[a-z]*(?:[A-Z]|-)){', STR(?step1591), '}'), ''))))) - STRLEN(REPLACE(SUBSTR(?targetMotifMatchCigarP08669MF_04084579, 1, (STRLEN(?targetMotifMatchCigarP08669MF_04084579) - STRLEN(REPLACE(?targetMotifMatchCigarP08669MF_04084579, CONCAT('^(?:[a-z]*(?:[A-Z]|-)){', STR(?step1591), '}'), '')))), '[^-]', ''))) AS ?step2592) . BIND(((?step2592 + ?targetMotifMatchRegionMatchBeginPositionMF_04084580) - 1) AS ?thisPositionOn150) . BIND(?this AS ?pfs3t593) . BIND(URI(CONCAT(STR(?thisSequence), '#position', STR(?thisPositionOn149))) AS ?pfsb147) . BIND(URI(CONCAT(STR(?thisSequence), '#position', STR(?thisPositionOn150))) AS ?pfse148) . FILTER ((BOUND(?thisPositionOn149) && BOUND(?thisPositionOn150))) . BIND(URI(CONCAT(STR(?this), '#MF_04084a146')) AS ?annotation146) . BIND(?this AS ?pfs145) . } OPTIONAL { ?this up:sequence ?thisSequence . ?thisSequence rdf:value ?thisSequenceValue . ?templateMotifMatch598 faldo:location ?templateMotifSequenceMatchRegionP08669599 ; edam:is_output_of ?templateMotifSequenceProfileAlignmentOperationP08669601 ; rdf:type edam:data_0869 ; rdf:value ?templateMotifCigarP08669MF_04084594 . ?templateMotifSequenceMatchRegionP08669599 faldo:begin ?templateMotifSequenceMatchBeginP08669600 . ?templateMotifSequenceMatchBeginP08669600 faldo:position ?templateMotifSequenceMatchBeginPositionP08669595 ; faldo:reference isoform:P08669-1 . ?templateMotifSequenceProfileAlignmentOperationP08669601 edam:has_input signature:MF_04084 ; rdf:type edam:operation_0300 . ?targetMotifMatch602 faldo:location ?targetMotifMatchRegionMatch603 ; edam:is_output_of ?targetMotifSequenceAlignmentOperationMF_04084605 ; rdf:type edam:data_0869 ; rdf:value ?targetMotifMatchCigarP08669MF_04084596 . ?targetMotifMatchRegionMatch603 faldo:begin ?targetMotifMatchRegionMatchBeginMF_04084604 . ?targetMotifMatchRegionMatchBeginMF_04084604 faldo:position ?targetMotifMatchRegionMatchBeginPositionMF_04084597 ; faldo:reference ?thisSequence . ?targetMotifSequenceAlignmentOperationMF_04084605 edam:has_input signature:MF_04084 ; rdf:type edam:operation_0300 . BIND(STRLEN(REPLACE(SUBSTR(?templateMotifCigarP08669MF_04084594, 1, (STRLEN(?templateMotifCigarP08669MF_04084594) - STRLEN(REPLACE(?templateMotifCigarP08669MF_04084594, CONCAT('^(?:-*[^-]){', STR(((433 - ?templateMotifSequenceMatchBeginPositionP08669595) + 1)), '}'), '')))), '[a-z]', '')) AS ?step1606) . BIND((STRLEN(SUBSTR(?targetMotifMatchCigarP08669MF_04084596, 1, (STRLEN(?targetMotifMatchCigarP08669MF_04084596) - STRLEN(REPLACE(?targetMotifMatchCigarP08669MF_04084596, CONCAT('^(?:[a-z]*(?:[A-Z]|-)){', STR(?step1606), '}'), ''))))) - STRLEN(REPLACE(SUBSTR(?targetMotifMatchCigarP08669MF_04084596, 1, (STRLEN(?targetMotifMatchCigarP08669MF_04084596) - STRLEN(REPLACE(?targetMotifMatchCigarP08669MF_04084596, CONCAT('^(?:[a-z]*(?:[A-Z]|-)){', STR(?step1606), '}'), '')))), '[^-]', ''))) AS ?step2607) . BIND(((?step2607 + ?targetMotifMatchRegionMatchBeginPositionMF_04084597) - 1) AS ?thisPositionOn155) . BIND(STRLEN(REPLACE(SUBSTR(?templateMotifCigarP08669MF_04084594, 1, (STRLEN(?templateMotifCigarP08669MF_04084594) - STRLEN(REPLACE(?templateMotifCigarP08669MF_04084594, CONCAT('^(?:-*[^-]){', STR(((453 - ?templateMotifSequenceMatchBeginPositionP08669595) + 1)), '}'), '')))), '[a-z]', '')) AS ?step1608) . BIND((STRLEN(SUBSTR(?targetMotifMatchCigarP08669MF_04084596, 1, (STRLEN(?targetMotifMatchCigarP08669MF_04084596) - STRLEN(REPLACE(?targetMotifMatchCigarP08669MF_04084596, CONCAT('^(?:[a-z]*(?:[A-Z]|-)){', STR(?step1608), '}'), ''))))) - STRLEN(REPLACE(SUBSTR(?targetMotifMatchCigarP08669MF_04084596, 1, (STRLEN(?targetMotifMatchCigarP08669MF_04084596) - STRLEN(REPLACE(?targetMotifMatchCigarP08669MF_04084596, CONCAT('^(?:[a-z]*(?:[A-Z]|-)){', STR(?step1608), '}'), '')))), '[^-]', ''))) AS ?step2609) . BIND(((?step2609 + ?targetMotifMatchRegionMatchBeginPositionMF_04084597) - 1) AS ?thisPositionOn156) . BIND(?this AS ?pfs3t610) . BIND(URI(CONCAT(STR(?thisSequence), '#position', STR(?thisPositionOn155))) AS ?pfsb153) . BIND(URI(CONCAT(STR(?thisSequence), '#position', STR(?thisPositionOn156))) AS ?pfse154) . FILTER ((BOUND(?thisPositionOn155) && BOUND(?thisPositionOn156))) . BIND(URI(CONCAT(STR(?this), '#MF_04084a152')) AS ?annotation152) . BIND(?this AS ?pfs151) . } OPTIONAL { ?this up:sequence ?thisSequence . ?thisSequence rdf:value ?thisSequenceValue . ?templateMotifMatch615 faldo:location ?templateMotifSequenceMatchRegionP08669616 ; edam:is_output_of ?templateMotifSequenceProfileAlignmentOperationP08669618 ; rdf:type edam:data_0869 ; rdf:value ?templateMotifCigarP08669MF_04084611 . ?templateMotifSequenceMatchRegionP08669616 faldo:begin ?templateMotifSequenceMatchBeginP08669617 . ?templateMotifSequenceMatchBeginP08669617 faldo:position ?templateMotifSequenceMatchBeginPositionP08669612 ; faldo:reference isoform:P08669-1 . ?templateMotifSequenceProfileAlignmentOperationP08669618 edam:has_input signature:MF_04084 ; rdf:type edam:operation_0300 . ?targetMotifMatch619 faldo:location ?targetMotifMatchRegionMatch620 ; edam:is_output_of ?targetMotifSequenceAlignmentOperationMF_04084622 ; rdf:type edam:data_0869 ; rdf:value ?targetMotifMatchCigarP08669MF_04084613 . ?targetMotifMatchRegionMatch620 faldo:begin ?targetMotifMatchRegionMatchBeginMF_04084621 . ?targetMotifMatchRegionMatchBeginMF_04084621 faldo:position ?targetMotifMatchRegionMatchBeginPositionMF_04084614 ; faldo:reference ?thisSequence . ?targetMotifSequenceAlignmentOperationMF_04084622 edam:has_input signature:MF_04084 ; rdf:type edam:operation_0300 . BIND(STRLEN(REPLACE(SUBSTR(?templateMotifCigarP08669MF_04084611, 1, (STRLEN(?templateMotifCigarP08669MF_04084611) - STRLEN(REPLACE(?templateMotifCigarP08669MF_04084611, CONCAT('^(?:-*[^-]){', STR(((454 - ?templateMotifSequenceMatchBeginPositionP08669612) + 1)), '}'), '')))), '[a-z]', '')) AS ?step1623) . BIND((STRLEN(SUBSTR(?targetMotifMatchCigarP08669MF_04084613, 1, (STRLEN(?targetMotifMatchCigarP08669MF_04084613) - STRLEN(REPLACE(?targetMotifMatchCigarP08669MF_04084613, CONCAT('^(?:[a-z]*(?:[A-Z]|-)){', STR(?step1623), '}'), ''))))) - STRLEN(REPLACE(SUBSTR(?targetMotifMatchCigarP08669MF_04084613, 1, (STRLEN(?targetMotifMatchCigarP08669MF_04084613) - STRLEN(REPLACE(?targetMotifMatchCigarP08669MF_04084613, CONCAT('^(?:[a-z]*(?:[A-Z]|-)){', STR(?step1623), '}'), '')))), '[^-]', ''))) AS ?step2624) . BIND(((?step2624 + ?targetMotifMatchRegionMatchBeginPositionMF_04084614) - 1) AS ?thisPositionOn161) . BIND(STRLEN(?thisSequenceValue) AS ?thisPositionOn162) . BIND(?this AS ?pfs3t625) . BIND(URI(CONCAT(STR(?thisSequence), '#position', STR(?thisPositionOn161))) AS ?pfsb159) . BIND(URI(CONCAT(STR(?thisSequence), '#position', STR(?thisPositionOn162))) AS ?pfse160) . FILTER ((BOUND(?thisPositionOn161) && BOUND(?thisPositionOn162))) . BIND(URI(CONCAT(STR(?this), '#MF_04084a158')) AS ?annotation158) . BIND(?this AS ?pfs157) . } OPTIONAL { ?this up:sequence ?thisSequence . ?thisSequence rdf:value ?thisSequenceValue . ?templateMotifMatch630 faldo:location ?templateMotifSequenceMatchRegionP08669631 ; edam:is_output_of ?templateMotifSequenceProfileAlignmentOperationP08669633 ; rdf:type edam:data_0869 ; rdf:value ?templateMotifCigarP08669MF_04084626 . ?templateMotifSequenceMatchRegionP08669631 faldo:begin ?templateMotifSequenceMatchBeginP08669632 . ?templateMotifSequenceMatchBeginP08669632 faldo:position ?templateMotifSequenceMatchBeginPositionP08669627 ; faldo:reference isoform:P08669-1 . ?templateMotifSequenceProfileAlignmentOperationP08669633 edam:has_input signature:MF_04084 ; rdf:type edam:operation_0300 . ?targetMotifMatch634 faldo:location ?targetMotifMatchRegionMatch635 ; edam:is_output_of ?targetMotifSequenceAlignmentOperationMF_04084637 ; rdf:type edam:data_0869 ; rdf:value ?targetMotifMatchCigarP08669MF_04084628 . ?targetMotifMatchRegionMatch635 faldo:begin ?targetMotifMatchRegionMatchBeginMF_04084636 . ?targetMotifMatchRegionMatchBeginMF_04084636 faldo:position ?targetMotifMatchRegionMatchBeginPositionMF_04084629 ; faldo:reference ?thisSequence . ?targetMotifSequenceAlignmentOperationMF_04084637 edam:has_input signature:MF_04084 ; rdf:type edam:operation_0300 . BIND(STRLEN(REPLACE(SUBSTR(?templateMotifCigarP08669MF_04084626, 1, (STRLEN(?templateMotifCigarP08669MF_04084626) - STRLEN(REPLACE(?templateMotifCigarP08669MF_04084626, CONCAT('^(?:-*[^-]){', STR(((58 - ?templateMotifSequenceMatchBeginPositionP08669627) + 1)), '}'), '')))), '[a-z]', '')) AS ?step1638) . BIND((STRLEN(SUBSTR(?targetMotifMatchCigarP08669MF_04084628, 1, (STRLEN(?targetMotifMatchCigarP08669MF_04084628) - STRLEN(REPLACE(?targetMotifMatchCigarP08669MF_04084628, CONCAT('^(?:[a-z]*(?:[A-Z]|-)){', STR(?step1638), '}'), ''))))) - STRLEN(REPLACE(SUBSTR(?targetMotifMatchCigarP08669MF_04084628, 1, (STRLEN(?targetMotifMatchCigarP08669MF_04084628) - STRLEN(REPLACE(?targetMotifMatchCigarP08669MF_04084628, CONCAT('^(?:[a-z]*(?:[A-Z]|-)){', STR(?step1638), '}'), '')))), '[^-]', ''))) AS ?step2639) . BIND(((?step2639 + ?targetMotifMatchRegionMatchBeginPositionMF_04084629) - 1) AS ?thisPositionOn167) . BIND(STRLEN(REPLACE(SUBSTR(?templateMotifCigarP08669MF_04084626, 1, (STRLEN(?templateMotifCigarP08669MF_04084626) - STRLEN(REPLACE(?templateMotifCigarP08669MF_04084626, CONCAT('^(?:-*[^-]){', STR(((59 - ?templateMotifSequenceMatchBeginPositionP08669627) + 1)), '}'), '')))), '[a-z]', '')) AS ?step1640) . BIND((STRLEN(SUBSTR(?targetMotifMatchCigarP08669MF_04084628, 1, (STRLEN(?targetMotifMatchCigarP08669MF_04084628) - STRLEN(REPLACE(?targetMotifMatchCigarP08669MF_04084628, CONCAT('^(?:[a-z]*(?:[A-Z]|-)){', STR(?step1640), '}'), ''))))) - STRLEN(REPLACE(SUBSTR(?targetMotifMatchCigarP08669MF_04084628, 1, (STRLEN(?targetMotifMatchCigarP08669MF_04084628) - STRLEN(REPLACE(?targetMotifMatchCigarP08669MF_04084628, CONCAT('^(?:[a-z]*(?:[A-Z]|-)){', STR(?step1640), '}'), '')))), '[^-]', ''))) AS ?step2641) . BIND(((?step2641 + ?targetMotifMatchRegionMatchBeginPositionMF_04084629) - 1) AS ?thisPositionOn168) . BIND(?this AS ?pfs3t642) . BIND(URI(CONCAT(STR(?thisSequence), '#position', STR(?thisPositionOn167))) AS ?pfsb165) . BIND(URI(CONCAT(STR(?thisSequence), '#position', STR(?thisPositionOn168))) AS ?pfse166) . FILTER ((BOUND(?thisPositionOn167) && BOUND(?thisPositionOn168))) . BIND(URI(CONCAT(STR(?this), '#MF_04084a164')) AS ?annotation164) . BIND(?this AS ?pfs163) . } OPTIONAL { ?this up:sequence ?thisSequence . ?thisSequence rdf:value ?thisSequenceValue . ?templateMotifMatch647 faldo:location ?templateMotifSequenceMatchRegionP08669648 ; edam:is_output_of ?templateMotifSequenceProfileAlignmentOperationP08669650 ; rdf:type edam:data_0869 ; rdf:value ?templateMotifCigarP08669MF_04084643 . ?templateMotifSequenceMatchRegionP08669648 faldo:begin ?templateMotifSequenceMatchBeginP08669649 . ?templateMotifSequenceMatchBeginP08669649 faldo:position ?templateMotifSequenceMatchBeginPositionP08669644 ; faldo:reference isoform:P08669-1 . ?templateMotifSequenceProfileAlignmentOperationP08669650 edam:has_input signature:MF_04084 ; rdf:type edam:operation_0300 . ?targetMotifMatch651 faldo:location ?targetMotifMatchRegionMatch652 ; edam:is_output_of ?targetMotifSequenceAlignmentOperationMF_04084654 ; rdf:type edam:data_0869 ; rdf:value ?targetMotifMatchCigarP08669MF_04084645 . ?targetMotifMatchRegionMatch652 faldo:begin ?targetMotifMatchRegionMatchBeginMF_04084653 . ?targetMotifMatchRegionMatchBeginMF_04084653 faldo:position ?targetMotifMatchRegionMatchBeginPositionMF_04084646 ; faldo:reference ?thisSequence . ?targetMotifSequenceAlignmentOperationMF_04084654 edam:has_input signature:MF_04084 ; rdf:type edam:operation_0300 . BIND(STRLEN(REPLACE(SUBSTR(?templateMotifCigarP08669MF_04084643, 1, (STRLEN(?templateMotifCigarP08669MF_04084643) - STRLEN(REPLACE(?templateMotifCigarP08669MF_04084643, CONCAT('^(?:-*[^-]){', STR(((259 - ?templateMotifSequenceMatchBeginPositionP08669644) + 1)), '}'), '')))), '[a-z]', '')) AS ?step1655) . BIND((STRLEN(SUBSTR(?targetMotifMatchCigarP08669MF_04084645, 1, (STRLEN(?targetMotifMatchCigarP08669MF_04084645) - STRLEN(REPLACE(?targetMotifMatchCigarP08669MF_04084645, CONCAT('^(?:[a-z]*(?:[A-Z]|-)){', STR(?step1655), '}'), ''))))) - STRLEN(REPLACE(SUBSTR(?targetMotifMatchCigarP08669MF_04084645, 1, (STRLEN(?targetMotifMatchCigarP08669MF_04084645) - STRLEN(REPLACE(?targetMotifMatchCigarP08669MF_04084645, CONCAT('^(?:[a-z]*(?:[A-Z]|-)){', STR(?step1655), '}'), '')))), '[^-]', ''))) AS ?step2656) . BIND(((?step2656 + ?targetMotifMatchRegionMatchBeginPositionMF_04084646) - 1) AS ?thisPositionOn173) . BIND(STRLEN(REPLACE(SUBSTR(?templateMotifCigarP08669MF_04084643, 1, (STRLEN(?templateMotifCigarP08669MF_04084643) - STRLEN(REPLACE(?templateMotifCigarP08669MF_04084643, CONCAT('^(?:-*[^-]){', STR(((260 - ?templateMotifSequenceMatchBeginPositionP08669644) + 1)), '}'), '')))), '[a-z]', '')) AS ?step1657) . BIND((STRLEN(SUBSTR(?targetMotifMatchCigarP08669MF_04084645, 1, (STRLEN(?targetMotifMatchCigarP08669MF_04084645) - STRLEN(REPLACE(?targetMotifMatchCigarP08669MF_04084645, CONCAT('^(?:[a-z]*(?:[A-Z]|-)){', STR(?step1657), '}'), ''))))) - STRLEN(REPLACE(SUBSTR(?targetMotifMatchCigarP08669MF_04084645, 1, (STRLEN(?targetMotifMatchCigarP08669MF_04084645) - STRLEN(REPLACE(?targetMotifMatchCigarP08669MF_04084645, CONCAT('^(?:[a-z]*(?:[A-Z]|-)){', STR(?step1657), '}'), '')))), '[^-]', ''))) AS ?step2658) . BIND(((?step2658 + ?targetMotifMatchRegionMatchBeginPositionMF_04084646) - 1) AS ?thisPositionOn174) . BIND(?this AS ?pfs3t659) . BIND(URI(CONCAT(STR(?thisSequence), '#position', STR(?thisPositionOn173))) AS ?pfsb171) . BIND(URI(CONCAT(STR(?thisSequence), '#position', STR(?thisPositionOn174))) AS ?pfse172) . FILTER ((BOUND(?thisPositionOn173) && BOUND(?thisPositionOn174))) . BIND(URI(CONCAT(STR(?this), '#MF_04084a170')) AS ?annotation170) . BIND(?this AS ?pfs169) . } OPTIONAL { ?this up:sequence ?thisSequence . ?thisSequence rdf:value ?thisSequenceValue . ?templateMotifMatch664 faldo:location ?templateMotifSequenceMatchRegionP08669665 ; edam:is_output_of ?templateMotifSequenceProfileAlignmentOperationP08669667 ; rdf:type edam:data_0869 ; rdf:value ?templateMotifCigarP08669MF_04084660 . ?templateMotifSequenceMatchRegionP08669665 faldo:begin ?templateMotifSequenceMatchBeginP08669666 . ?templateMotifSequenceMatchBeginP08669666 faldo:position ?templateMotifSequenceMatchBeginPositionP08669661 ; faldo:reference isoform:P08669-1 . ?templateMotifSequenceProfileAlignmentOperationP08669667 edam:has_input signature:MF_04084 ; rdf:type edam:operation_0300 . ?targetMotifMatch668 faldo:location ?targetMotifMatchRegionMatch669 ; edam:is_output_of ?targetMotifSequenceAlignmentOperationMF_04084671 ; rdf:type edam:data_0869 ; rdf:value ?targetMotifMatchCigarP08669MF_04084662 . ?targetMotifMatchRegionMatch669 faldo:begin ?targetMotifMatchRegionMatchBeginMF_04084670 . ?targetMotifMatchRegionMatchBeginMF_04084670 faldo:position ?targetMotifMatchRegionMatchBeginPositionMF_04084663 ; faldo:reference ?thisSequence . ?targetMotifSequenceAlignmentOperationMF_04084671 edam:has_input signature:MF_04084 ; rdf:type edam:operation_0300 . BIND(STRLEN(REPLACE(SUBSTR(?templateMotifCigarP08669MF_04084660, 1, (STRLEN(?templateMotifCigarP08669MF_04084660) - STRLEN(REPLACE(?templateMotifCigarP08669MF_04084660, CONCAT('^(?:-*[^-]){', STR(((258 - ?templateMotifSequenceMatchBeginPositionP08669661) + 1)), '}'), '')))), '[a-z]', '')) AS ?step1672) . BIND((STRLEN(SUBSTR(?targetMotifMatchCigarP08669MF_04084662, 1, (STRLEN(?targetMotifMatchCigarP08669MF_04084662) - STRLEN(REPLACE(?targetMotifMatchCigarP08669MF_04084662, CONCAT('^(?:[a-z]*(?:[A-Z]|-)){', STR(?step1672), '}'), ''))))) - STRLEN(REPLACE(SUBSTR(?targetMotifMatchCigarP08669MF_04084662, 1, (STRLEN(?targetMotifMatchCigarP08669MF_04084662) - STRLEN(REPLACE(?targetMotifMatchCigarP08669MF_04084662, CONCAT('^(?:[a-z]*(?:[A-Z]|-)){', STR(?step1672), '}'), '')))), '[^-]', ''))) AS ?step2673) . BIND(((?step2673 + ?targetMotifMatchRegionMatchBeginPositionMF_04084663) - 1) AS ?thisPositionOn179) . BIND(STRLEN(REPLACE(SUBSTR(?templateMotifCigarP08669MF_04084660, 1, (STRLEN(?templateMotifCigarP08669MF_04084660) - STRLEN(REPLACE(?templateMotifCigarP08669MF_04084660, CONCAT('^(?:-*[^-]){', STR(((294 - ?templateMotifSequenceMatchBeginPositionP08669661) + 1)), '}'), '')))), '[a-z]', '')) AS ?step1674) . BIND((STRLEN(SUBSTR(?targetMotifMatchCigarP08669MF_04084662, 1, (STRLEN(?targetMotifMatchCigarP08669MF_04084662) - STRLEN(REPLACE(?targetMotifMatchCigarP08669MF_04084662, CONCAT('^(?:[a-z]*(?:[A-Z]|-)){', STR(?step1674), '}'), ''))))) - STRLEN(REPLACE(SUBSTR(?targetMotifMatchCigarP08669MF_04084662, 1, (STRLEN(?targetMotifMatchCigarP08669MF_04084662) - STRLEN(REPLACE(?targetMotifMatchCigarP08669MF_04084662, CONCAT('^(?:[a-z]*(?:[A-Z]|-)){', STR(?step1674), '}'), '')))), '[^-]', ''))) AS ?step2675) . BIND(((?step2675 + ?targetMotifMatchRegionMatchBeginPositionMF_04084663) - 1) AS ?thisPositionOn180) . BIND(?this AS ?pfs3t676) . BIND(URI(CONCAT(STR(?thisSequence), '#position', STR(?thisPositionOn179))) AS ?pfsb177) . BIND(URI(CONCAT(STR(?thisSequence), '#position', STR(?thisPositionOn180))) AS ?pfse178) . FILTER ((BOUND(?thisPositionOn179) && BOUND(?thisPositionOn180))) . BIND(URI(CONCAT(STR(?this), '#MF_04084a176')) AS ?annotation176) . BIND(?this AS ?pfs175) . } OPTIONAL { ?this up:sequence ?thisSequence . ?thisSequence rdf:value ?thisSequenceValue . ?templateMotifMatch681 faldo:location ?templateMotifSequenceMatchRegionP08669682 ; edam:is_output_of ?templateMotifSequenceProfileAlignmentOperationP08669684 ; rdf:type edam:data_0869 ; rdf:value ?templateMotifCigarP08669MF_04084677 . ?templateMotifSequenceMatchRegionP08669682 faldo:begin ?templateMotifSequenceMatchBeginP08669683 . ?templateMotifSequenceMatchBeginP08669683 faldo:position ?templateMotifSequenceMatchBeginPositionP08669678 ; faldo:reference isoform:P08669-1 . ?templateMotifSequenceProfileAlignmentOperationP08669684 edam:has_input signature:MF_04084 ; rdf:type edam:operation_0300 . ?targetMotifMatch685 faldo:location ?targetMotifMatchRegionMatch686 ; edam:is_output_of ?targetMotifSequenceAlignmentOperationMF_04084688 ; rdf:type edam:data_0869 ; rdf:value ?targetMotifMatchCigarP08669MF_04084679 . ?targetMotifMatchRegionMatch686 faldo:begin ?targetMotifMatchRegionMatchBeginMF_04084687 . ?targetMotifMatchRegionMatchBeginMF_04084687 faldo:position ?targetMotifMatchRegionMatchBeginPositionMF_04084680 ; faldo:reference ?thisSequence . ?targetMotifSequenceAlignmentOperationMF_04084688 edam:has_input signature:MF_04084 ; rdf:type edam:operation_0300 . BIND(STRLEN(REPLACE(SUBSTR(?templateMotifCigarP08669MF_04084677, 1, (STRLEN(?templateMotifCigarP08669MF_04084677) - STRLEN(REPLACE(?templateMotifCigarP08669MF_04084677, CONCAT('^(?:-*[^-]){', STR(((295 - ?templateMotifSequenceMatchBeginPositionP08669678) + 1)), '}'), '')))), '[a-z]', '')) AS ?step1689) . BIND((STRLEN(SUBSTR(?targetMotifMatchCigarP08669MF_04084679, 1, (STRLEN(?targetMotifMatchCigarP08669MF_04084679) - STRLEN(REPLACE(?targetMotifMatchCigarP08669MF_04084679, CONCAT('^(?:[a-z]*(?:[A-Z]|-)){', STR(?step1689), '}'), ''))))) - STRLEN(REPLACE(SUBSTR(?targetMotifMatchCigarP08669MF_04084679, 1, (STRLEN(?targetMotifMatchCigarP08669MF_04084679) - STRLEN(REPLACE(?targetMotifMatchCigarP08669MF_04084679, CONCAT('^(?:[a-z]*(?:[A-Z]|-)){', STR(?step1689), '}'), '')))), '[^-]', ''))) AS ?step2690) . BIND(((?step2690 + ?targetMotifMatchRegionMatchBeginPositionMF_04084680) - 1) AS ?thisPositionOn185) . BIND(STRLEN(REPLACE(SUBSTR(?templateMotifCigarP08669MF_04084677, 1, (STRLEN(?templateMotifCigarP08669MF_04084677) - STRLEN(REPLACE(?templateMotifCigarP08669MF_04084677, CONCAT('^(?:-*[^-]){', STR(((363 - ?templateMotifSequenceMatchBeginPositionP08669678) + 1)), '}'), '')))), '[a-z]', '')) AS ?step1691) . BIND((STRLEN(SUBSTR(?targetMotifMatchCigarP08669MF_04084679, 1, (STRLEN(?targetMotifMatchCigarP08669MF_04084679) - STRLEN(REPLACE(?targetMotifMatchCigarP08669MF_04084679, CONCAT('^(?:[a-z]*(?:[A-Z]|-)){', STR(?step1691), '}'), ''))))) - STRLEN(REPLACE(SUBSTR(?targetMotifMatchCigarP08669MF_04084679, 1, (STRLEN(?targetMotifMatchCigarP08669MF_04084679) - STRLEN(REPLACE(?targetMotifMatchCigarP08669MF_04084679, CONCAT('^(?:[a-z]*(?:[A-Z]|-)){', STR(?step1691), '}'), '')))), '[^-]', ''))) AS ?step2692) . BIND(((?step2692 + ?targetMotifMatchRegionMatchBeginPositionMF_04084680) - 1) AS ?thisPositionOn186) . BIND(?this AS ?pfs3t693) . BIND(URI(CONCAT(STR(?thisSequence), '#position', STR(?thisPositionOn185))) AS ?pfsb183) . BIND(URI(CONCAT(STR(?thisSequence), '#position', STR(?thisPositionOn186))) AS ?pfse184) . FILTER ((BOUND(?thisPositionOn185) && BOUND(?thisPositionOn186))) . BIND(URI(CONCAT(STR(?this), '#MF_04084a182')) AS ?annotation182) . BIND(?this AS ?pfs181) . } OPTIONAL { ?this up:sequence ?thisSequence . ?thisSequence rdf:value ?thisSequenceValue . ?templateMotifMatch698 faldo:location ?templateMotifSequenceMatchRegionP08669699 ; edam:is_output_of ?templateMotifSequenceProfileAlignmentOperationP08669701 ; rdf:type edam:data_0869 ; rdf:value ?templateMotifCigarP08669MF_04084694 . ?templateMotifSequenceMatchRegionP08669699 faldo:begin ?templateMotifSequenceMatchBeginP08669700 . ?templateMotifSequenceMatchBeginP08669700 faldo:position ?templateMotifSequenceMatchBeginPositionP08669695 ; faldo:reference isoform:P08669-1 . ?templateMotifSequenceProfileAlignmentOperationP08669701 edam:has_input signature:MF_04084 ; rdf:type edam:operation_0300 . ?targetMotifMatch702 faldo:location ?targetMotifMatchRegionMatch703 ; edam:is_output_of ?targetMotifSequenceAlignmentOperationMF_04084705 ; rdf:type edam:data_0869 ; rdf:value ?targetMotifMatchCigarP08669MF_04084696 . ?targetMotifMatchRegionMatch703 faldo:begin ?targetMotifMatchRegionMatchBeginMF_04084704 . ?targetMotifMatchRegionMatchBeginMF_04084704 faldo:position ?targetMotifMatchRegionMatchBeginPositionMF_04084697 ; faldo:reference ?thisSequence . ?targetMotifSequenceAlignmentOperationMF_04084705 edam:has_input signature:MF_04084 ; rdf:type edam:operation_0300 . BIND(STRLEN(REPLACE(SUBSTR(?templateMotifCigarP08669MF_04084694, 1, (STRLEN(?templateMotifCigarP08669MF_04084694) - STRLEN(REPLACE(?templateMotifCigarP08669MF_04084694, CONCAT('^(?:-*[^-]){', STR(((368 - ?templateMotifSequenceMatchBeginPositionP08669695) + 1)), '}'), '')))), '[a-z]', '')) AS ?step1706) . BIND((STRLEN(SUBSTR(?targetMotifMatchCigarP08669MF_04084696, 1, (STRLEN(?targetMotifMatchCigarP08669MF_04084696) - STRLEN(REPLACE(?targetMotifMatchCigarP08669MF_04084696, CONCAT('^(?:[a-z]*(?:[A-Z]|-)){', STR(?step1706), '}'), ''))))) - STRLEN(REPLACE(SUBSTR(?targetMotifMatchCigarP08669MF_04084696, 1, (STRLEN(?targetMotifMatchCigarP08669MF_04084696) - STRLEN(REPLACE(?targetMotifMatchCigarP08669MF_04084696, CONCAT('^(?:[a-z]*(?:[A-Z]|-)){', STR(?step1706), '}'), '')))), '[^-]', ''))) AS ?step2707) . BIND(((?step2707 + ?targetMotifMatchRegionMatchBeginPositionMF_04084697) - 1) AS ?thisPositionOn191) . BIND(STRLEN(REPLACE(SUBSTR(?templateMotifCigarP08669MF_04084694, 1, (STRLEN(?templateMotifCigarP08669MF_04084694) - STRLEN(REPLACE(?templateMotifCigarP08669MF_04084694, CONCAT('^(?:-*[^-]){', STR(((431 - ?templateMotifSequenceMatchBeginPositionP08669695) + 1)), '}'), '')))), '[a-z]', '')) AS ?step1708) . BIND((STRLEN(SUBSTR(?targetMotifMatchCigarP08669MF_04084696, 1, (STRLEN(?targetMotifMatchCigarP08669MF_04084696) - STRLEN(REPLACE(?targetMotifMatchCigarP08669MF_04084696, CONCAT('^(?:[a-z]*(?:[A-Z]|-)){', STR(?step1708), '}'), ''))))) - STRLEN(REPLACE(SUBSTR(?targetMotifMatchCigarP08669MF_04084696, 1, (STRLEN(?targetMotifMatchCigarP08669MF_04084696) - STRLEN(REPLACE(?targetMotifMatchCigarP08669MF_04084696, CONCAT('^(?:[a-z]*(?:[A-Z]|-)){', STR(?step1708), '}'), '')))), '[^-]', ''))) AS ?step2709) . BIND(((?step2709 + ?targetMotifMatchRegionMatchBeginPositionMF_04084697) - 1) AS ?thisPositionOn192) . BIND(?this AS ?pfs3t710) . BIND(URI(CONCAT(STR(?thisSequence), '#position', STR(?thisPositionOn191))) AS ?pfsb189) . BIND(URI(CONCAT(STR(?thisSequence), '#position', STR(?thisPositionOn192))) AS ?pfse190) . FILTER ((BOUND(?thisPositionOn191) && BOUND(?thisPositionOn192))) . BIND(URI(CONCAT(STR(?this), '#MF_04084a188')) AS ?annotation188) . BIND(?this AS ?pfs187) . } OPTIONAL { ?this up:sequence ?thisSequence . ?thisSequence rdf:value ?thisSequenceValue . ?templateMotifMatch715 faldo:location ?templateMotifSequenceMatchRegionP08669716 ; edam:is_output_of ?templateMotifSequenceProfileAlignmentOperationP08669718 ; rdf:type edam:data_0869 ; rdf:value ?templateMotifCigarP08669MF_04084711 . ?templateMotifSequenceMatchRegionP08669716 faldo:begin ?templateMotifSequenceMatchBeginP08669717 . ?templateMotifSequenceMatchBeginP08669717 faldo:position ?templateMotifSequenceMatchBeginPositionP08669712 ; faldo:reference isoform:P08669-1 . ?templateMotifSequenceProfileAlignmentOperationP08669718 edam:has_input signature:MF_04084 ; rdf:type edam:operation_0300 . ?targetMotifMatch719 faldo:location ?targetMotifMatchRegionMatch720 ; edam:is_output_of ?targetMotifSequenceAlignmentOperationMF_04084722 ; rdf:type edam:data_0869 ; rdf:value ?targetMotifMatchCigarP08669MF_04084713 . ?targetMotifMatchRegionMatch720 faldo:begin ?targetMotifMatchRegionMatchBeginMF_04084721 . ?targetMotifMatchRegionMatchBeginMF_04084721 faldo:position ?targetMotifMatchRegionMatchBeginPositionMF_04084714 ; faldo:reference ?thisSequence . ?targetMotifSequenceAlignmentOperationMF_04084722 edam:has_input signature:MF_04084 ; rdf:type edam:operation_0300 . BIND(STRLEN(REPLACE(SUBSTR(?templateMotifCigarP08669MF_04084711, 1, (STRLEN(?templateMotifCigarP08669MF_04084711) - STRLEN(REPLACE(?templateMotifCigarP08669MF_04084711, CONCAT('^(?:-*[^-]){', STR(((1 - ?templateMotifSequenceMatchBeginPositionP08669712) + 1)), '}'), '')))), '[a-z]', '')) AS ?step1723) . BIND((STRLEN(SUBSTR(?targetMotifMatchCigarP08669MF_04084713, 1, (STRLEN(?targetMotifMatchCigarP08669MF_04084713) - STRLEN(REPLACE(?targetMotifMatchCigarP08669MF_04084713, CONCAT('^(?:[a-z]*(?:[A-Z]|-)){', STR(?step1723), '}'), ''))))) - STRLEN(REPLACE(SUBSTR(?targetMotifMatchCigarP08669MF_04084713, 1, (STRLEN(?targetMotifMatchCigarP08669MF_04084713) - STRLEN(REPLACE(?targetMotifMatchCigarP08669MF_04084713, CONCAT('^(?:[a-z]*(?:[A-Z]|-)){', STR(?step1723), '}'), '')))), '[^-]', ''))) AS ?step2724) . BIND(((?step2724 + ?targetMotifMatchRegionMatchBeginPositionMF_04084714) - 1) AS ?thisPositionOn197) . BIND(?thisPositionOn197 AS ?thisPositionOn198) . BIND(?this AS ?pfs3t725) . BIND(URI(CONCAT(STR(?thisSequence), '#position', STR(?thisPositionOn197))) AS ?pfsb195) . BIND(URI(CONCAT(STR(?thisSequence), '#position', STR(?thisPositionOn198))) AS ?pfse196) . FILTER ((SUBSTR(?thisSequenceValue, ?thisPositionOn197, 1) = 'M')) . BIND(URI(CONCAT(STR(?this), '#MF_04084a194')) AS ?annotation194) . BIND(?this AS ?pfs193) . } OPTIONAL { ?this up:sequence ?thisSequence . ?thisSequence rdf:value ?thisSequenceValue . ?templateMotifMatch730 faldo:location ?templateMotifSequenceMatchRegionP08669731 ; edam:is_output_of ?templateMotifSequenceProfileAlignmentOperationP08669733 ; rdf:type edam:data_0869 ; rdf:value ?templateMotifCigarP08669MF_04084726 . ?templateMotifSequenceMatchRegionP08669731 faldo:begin ?templateMotifSequenceMatchBeginP08669732 . ?templateMotifSequenceMatchBeginP08669732 faldo:position ?templateMotifSequenceMatchBeginPositionP08669727 ; faldo:reference isoform:P08669-1 . ?templateMotifSequenceProfileAlignmentOperationP08669733 edam:has_input signature:MF_04084 ; rdf:type edam:operation_0300 . ?targetMotifMatch734 faldo:location ?targetMotifMatchRegionMatch735 ; edam:is_output_of ?targetMotifSequenceAlignmentOperationMF_04084737 ; rdf:type edam:data_0869 ; rdf:value ?targetMotifMatchCigarP08669MF_04084728 . ?targetMotifMatchRegionMatch735 faldo:begin ?targetMotifMatchRegionMatchBeginMF_04084736 . ?targetMotifMatchRegionMatchBeginMF_04084736 faldo:position ?targetMotifMatchRegionMatchBeginPositionMF_04084729 ; faldo:reference ?thisSequence . ?targetMotifSequenceAlignmentOperationMF_04084737 edam:has_input signature:MF_04084 ; rdf:type edam:operation_0300 . BIND(STRLEN(REPLACE(SUBSTR(?templateMotifCigarP08669MF_04084726, 1, (STRLEN(?templateMotifCigarP08669MF_04084726) - STRLEN(REPLACE(?templateMotifCigarP08669MF_04084726, CONCAT('^(?:-*[^-]){', STR(((2 - ?templateMotifSequenceMatchBeginPositionP08669727) + 1)), '}'), '')))), '[a-z]', '')) AS ?step1738) . BIND((STRLEN(SUBSTR(?targetMotifMatchCigarP08669MF_04084728, 1, (STRLEN(?targetMotifMatchCigarP08669MF_04084728) - STRLEN(REPLACE(?targetMotifMatchCigarP08669MF_04084728, CONCAT('^(?:[a-z]*(?:[A-Z]|-)){', STR(?step1738), '}'), ''))))) - STRLEN(REPLACE(SUBSTR(?targetMotifMatchCigarP08669MF_04084728, 1, (STRLEN(?targetMotifMatchCigarP08669MF_04084728) - STRLEN(REPLACE(?targetMotifMatchCigarP08669MF_04084728, CONCAT('^(?:[a-z]*(?:[A-Z]|-)){', STR(?step1738), '}'), '')))), '[^-]', ''))) AS ?step2739) . BIND(((?step2739 + ?targetMotifMatchRegionMatchBeginPositionMF_04084729) - 1) AS ?thisPositionOn203) . BIND(?thisPositionOn203 AS ?thisPositionOn204) . BIND(?this AS ?pfs3t740) . BIND(URI(CONCAT(STR(?thisSequence), '#position', STR(?thisPositionOn203))) AS ?pfsb201) . BIND(URI(CONCAT(STR(?thisSequence), '#position', STR(?thisPositionOn204))) AS ?pfse202) . FILTER ((SUBSTR(?thisSequenceValue, ?thisPositionOn203, 1) = 'G')) . BIND(URI(CONCAT(STR(?this), '#MF_04084a200')) AS ?annotation200) . BIND(?this AS ?pfs199) . } OPTIONAL { ?this up:sequence ?thisSequence . ?thisSequence rdf:value ?thisSequenceValue . ?templateMotifMatch745 faldo:location ?templateMotifSequenceMatchRegionP08669746 ; edam:is_output_of ?templateMotifSequenceProfileAlignmentOperationP08669748 ; rdf:type edam:data_0869 ; rdf:value ?templateMotifCigarP08669MF_04084741 . ?templateMotifSequenceMatchRegionP08669746 faldo:begin ?templateMotifSequenceMatchBeginP08669747 . ?templateMotifSequenceMatchBeginP08669747 faldo:position ?templateMotifSequenceMatchBeginPositionP08669742 ; faldo:reference isoform:P08669-1 . ?templateMotifSequenceProfileAlignmentOperationP08669748 edam:has_input signature:MF_04084 ; rdf:type edam:operation_0300 . ?targetMotifMatch749 faldo:location ?targetMotifMatchRegionMatch750 ; edam:is_output_of ?targetMotifSequenceAlignmentOperationMF_04084752 ; rdf:type edam:data_0869 ; rdf:value ?targetMotifMatchCigarP08669MF_04084743 . ?targetMotifMatchRegionMatch750 faldo:begin ?targetMotifMatchRegionMatchBeginMF_04084751 . ?targetMotifMatchRegionMatchBeginMF_04084751 faldo:position ?targetMotifMatchRegionMatchBeginPositionMF_04084744 ; faldo:reference ?thisSequence . ?targetMotifSequenceAlignmentOperationMF_04084752 edam:has_input signature:MF_04084 ; rdf:type edam:operation_0300 . BIND(STRLEN(REPLACE(SUBSTR(?templateMotifCigarP08669MF_04084741, 1, (STRLEN(?templateMotifCigarP08669MF_04084741) - STRLEN(REPLACE(?templateMotifCigarP08669MF_04084741, CONCAT('^(?:-*[^-]){', STR(((79 - ?templateMotifSequenceMatchBeginPositionP08669742) + 1)), '}'), '')))), '[a-z]', '')) AS ?step1753) . BIND((STRLEN(SUBSTR(?targetMotifMatchCigarP08669MF_04084743, 1, (STRLEN(?targetMotifMatchCigarP08669MF_04084743) - STRLEN(REPLACE(?targetMotifMatchCigarP08669MF_04084743, CONCAT('^(?:[a-z]*(?:[A-Z]|-)){', STR(?step1753), '}'), ''))))) - STRLEN(REPLACE(SUBSTR(?targetMotifMatchCigarP08669MF_04084743, 1, (STRLEN(?targetMotifMatchCigarP08669MF_04084743) - STRLEN(REPLACE(?targetMotifMatchCigarP08669MF_04084743, CONCAT('^(?:[a-z]*(?:[A-Z]|-)){', STR(?step1753), '}'), '')))), '[^-]', ''))) AS ?step2754) . BIND(((?step2754 + ?targetMotifMatchRegionMatchBeginPositionMF_04084744) - 1) AS ?thisPositionOn209) . BIND(?thisPositionOn209 AS ?thisPositionOn210) . BIND(?this AS ?pfs3t755) . BIND(URI(CONCAT(STR(?thisSequence), '#position', STR(?thisPositionOn209))) AS ?pfsb207) . BIND(URI(CONCAT(STR(?thisSequence), '#position', STR(?thisPositionOn210))) AS ?pfse208) . FILTER ((SUBSTR(?thisSequenceValue, ?thisPositionOn209, 1) = 'N')) . BIND(URI(CONCAT(STR(?this), '#MF_04084a206')) AS ?annotation206) . BIND(?this AS ?pfs205) . } OPTIONAL { ?this up:sequence ?thisSequence . ?thisSequence rdf:value ?thisSequenceValue . ?templateMotifMatch760 faldo:location ?templateMotifSequenceMatchRegionP08669761 ; edam:is_output_of ?templateMotifSequenceProfileAlignmentOperationP08669763 ; rdf:type edam:data_0869 ; rdf:value ?templateMotifCigarP08669MF_04084756 . ?templateMotifSequenceMatchRegionP08669761 faldo:begin ?templateMotifSequenceMatchBeginP08669762 . ?templateMotifSequenceMatchBeginP08669762 faldo:position ?templateMotifSequenceMatchBeginPositionP08669757 ; faldo:reference isoform:P08669-1 . ?templateMotifSequenceProfileAlignmentOperationP08669763 edam:has_input signature:MF_04084 ; rdf:type edam:operation_0300 . ?targetMotifMatch764 faldo:location ?targetMotifMatchRegionMatch765 ; edam:is_output_of ?targetMotifSequenceAlignmentOperationMF_04084767 ; rdf:type edam:data_0869 ; rdf:value ?targetMotifMatchCigarP08669MF_04084758 . ?targetMotifMatchRegionMatch765 faldo:begin ?targetMotifMatchRegionMatchBeginMF_04084766 . ?targetMotifMatchRegionMatchBeginMF_04084766 faldo:position ?targetMotifMatchRegionMatchBeginPositionMF_04084759 ; faldo:reference ?thisSequence . ?targetMotifSequenceAlignmentOperationMF_04084767 edam:has_input signature:MF_04084 ; rdf:type edam:operation_0300 . BIND(STRLEN(REPLACE(SUBSTR(?templateMotifCigarP08669MF_04084756, 1, (STRLEN(?templateMotifCigarP08669MF_04084756) - STRLEN(REPLACE(?templateMotifCigarP08669MF_04084756, CONCAT('^(?:-*[^-]){', STR(((89 - ?templateMotifSequenceMatchBeginPositionP08669757) + 1)), '}'), '')))), '[a-z]', '')) AS ?step1768) . BIND((STRLEN(SUBSTR(?targetMotifMatchCigarP08669MF_04084758, 1, (STRLEN(?targetMotifMatchCigarP08669MF_04084758) - STRLEN(REPLACE(?targetMotifMatchCigarP08669MF_04084758, CONCAT('^(?:[a-z]*(?:[A-Z]|-)){', STR(?step1768), '}'), ''))))) - STRLEN(REPLACE(SUBSTR(?targetMotifMatchCigarP08669MF_04084758, 1, (STRLEN(?targetMotifMatchCigarP08669MF_04084758) - STRLEN(REPLACE(?targetMotifMatchCigarP08669MF_04084758, CONCAT('^(?:[a-z]*(?:[A-Z]|-)){', STR(?step1768), '}'), '')))), '[^-]', ''))) AS ?step2769) . BIND(((?step2769 + ?targetMotifMatchRegionMatchBeginPositionMF_04084759) - 1) AS ?thisPositionOn215) . BIND(?thisPositionOn215 AS ?thisPositionOn216) . BIND(?this AS ?pfs3t770) . BIND(URI(CONCAT(STR(?thisSequence), '#position', STR(?thisPositionOn215))) AS ?pfsb213) . BIND(URI(CONCAT(STR(?thisSequence), '#position', STR(?thisPositionOn216))) AS ?pfse214) . FILTER ((SUBSTR(?thisSequenceValue, ?thisPositionOn215, 1) = 'N')) . BIND(URI(CONCAT(STR(?this), '#MF_04084a212')) AS ?annotation212) . BIND(?this AS ?pfs211) . } OPTIONAL { ?this up:sequence ?thisSequence . ?thisSequence rdf:value ?thisSequenceValue . ?templateMotifMatch775 faldo:location ?templateMotifSequenceMatchRegionP08669776 ; edam:is_output_of ?templateMotifSequenceProfileAlignmentOperationP08669778 ; rdf:type edam:data_0869 ; rdf:value ?templateMotifCigarP08669MF_04084771 . ?templateMotifSequenceMatchRegionP08669776 faldo:begin ?templateMotifSequenceMatchBeginP08669777 . ?templateMotifSequenceMatchBeginP08669777 faldo:position ?templateMotifSequenceMatchBeginPositionP08669772 ; faldo:reference isoform:P08669-1 . ?templateMotifSequenceProfileAlignmentOperationP08669778 edam:has_input signature:MF_04084 ; rdf:type edam:operation_0300 . ?targetMotifMatch779 faldo:location ?targetMotifMatchRegionMatch780 ; edam:is_output_of ?targetMotifSequenceAlignmentOperationMF_04084782 ; rdf:type edam:data_0869 ; rdf:value ?targetMotifMatchCigarP08669MF_04084773 . ?targetMotifMatchRegionMatch780 faldo:begin ?targetMotifMatchRegionMatchBeginMF_04084781 . ?targetMotifMatchRegionMatchBeginMF_04084781 faldo:position ?targetMotifMatchRegionMatchBeginPositionMF_04084774 ; faldo:reference ?thisSequence . ?targetMotifSequenceAlignmentOperationMF_04084782 edam:has_input signature:MF_04084 ; rdf:type edam:operation_0300 . BIND(STRLEN(REPLACE(SUBSTR(?templateMotifCigarP08669MF_04084771, 1, (STRLEN(?templateMotifCigarP08669MF_04084771) - STRLEN(REPLACE(?templateMotifCigarP08669MF_04084771, CONCAT('^(?:-*[^-]){', STR(((99 - ?templateMotifSequenceMatchBeginPositionP08669772) + 1)), '}'), '')))), '[a-z]', '')) AS ?step1783) . BIND((STRLEN(SUBSTR(?targetMotifMatchCigarP08669MF_04084773, 1, (STRLEN(?targetMotifMatchCigarP08669MF_04084773) - STRLEN(REPLACE(?targetMotifMatchCigarP08669MF_04084773, CONCAT('^(?:[a-z]*(?:[A-Z]|-)){', STR(?step1783), '}'), ''))))) - STRLEN(REPLACE(SUBSTR(?targetMotifMatchCigarP08669MF_04084773, 1, (STRLEN(?targetMotifMatchCigarP08669MF_04084773) - STRLEN(REPLACE(?targetMotifMatchCigarP08669MF_04084773, CONCAT('^(?:[a-z]*(?:[A-Z]|-)){', STR(?step1783), '}'), '')))), '[^-]', ''))) AS ?step2784) . BIND(((?step2784 + ?targetMotifMatchRegionMatchBeginPositionMF_04084774) - 1) AS ?thisPositionOn221) . BIND(?thisPositionOn221 AS ?thisPositionOn222) . BIND(?this AS ?pfs3t785) . BIND(URI(CONCAT(STR(?thisSequence), '#position', STR(?thisPositionOn221))) AS ?pfsb219) . BIND(URI(CONCAT(STR(?thisSequence), '#position', STR(?thisPositionOn222))) AS ?pfse220) . FILTER ((SUBSTR(?thisSequenceValue, ?thisPositionOn221, 1) = 'N')) . BIND(URI(CONCAT(STR(?this), '#MF_04084a218')) AS ?annotation218) . BIND(?this AS ?pfs217) . } OPTIONAL { ?this up:sequence ?thisSequence . ?thisSequence rdf:value ?thisSequenceValue . ?templateMotifMatch790 faldo:location ?templateMotifSequenceMatchRegionP08669791 ; edam:is_output_of ?templateMotifSequenceProfileAlignmentOperationP08669793 ; rdf:type edam:data_0869 ; rdf:value ?templateMotifCigarP08669MF_04084786 . ?templateMotifSequenceMatchRegionP08669791 faldo:begin ?templateMotifSequenceMatchBeginP08669792 . ?templateMotifSequenceMatchBeginP08669792 faldo:position ?templateMotifSequenceMatchBeginPositionP08669787 ; faldo:reference isoform:P08669-1 . ?templateMotifSequenceProfileAlignmentOperationP08669793 edam:has_input signature:MF_04084 ; rdf:type edam:operation_0300 . ?targetMotifMatch794 faldo:location ?targetMotifMatchRegionMatch795 ; edam:is_output_of ?targetMotifSequenceAlignmentOperationMF_04084797 ; rdf:type edam:data_0869 ; rdf:value ?targetMotifMatchCigarP08669MF_04084788 . ?targetMotifMatchRegionMatch795 faldo:begin ?targetMotifMatchRegionMatchBeginMF_04084796 . ?targetMotifMatchRegionMatchBeginMF_04084796 faldo:position ?targetMotifMatchRegionMatchBeginPositionMF_04084789 ; faldo:reference ?thisSequence . ?targetMotifSequenceAlignmentOperationMF_04084797 edam:has_input signature:MF_04084 ; rdf:type edam:operation_0300 . BIND(STRLEN(REPLACE(SUBSTR(?templateMotifCigarP08669MF_04084786, 1, (STRLEN(?templateMotifCigarP08669MF_04084786) - STRLEN(REPLACE(?templateMotifCigarP08669MF_04084786, CONCAT('^(?:-*[^-]){', STR(((109 - ?templateMotifSequenceMatchBeginPositionP08669787) + 1)), '}'), '')))), '[a-z]', '')) AS ?step1798) . BIND((STRLEN(SUBSTR(?targetMotifMatchCigarP08669MF_04084788, 1, (STRLEN(?targetMotifMatchCigarP08669MF_04084788) - STRLEN(REPLACE(?targetMotifMatchCigarP08669MF_04084788, CONCAT('^(?:[a-z]*(?:[A-Z]|-)){', STR(?step1798), '}'), ''))))) - STRLEN(REPLACE(SUBSTR(?targetMotifMatchCigarP08669MF_04084788, 1, (STRLEN(?targetMotifMatchCigarP08669MF_04084788) - STRLEN(REPLACE(?targetMotifMatchCigarP08669MF_04084788, CONCAT('^(?:[a-z]*(?:[A-Z]|-)){', STR(?step1798), '}'), '')))), '[^-]', ''))) AS ?step2799) . BIND(((?step2799 + ?targetMotifMatchRegionMatchBeginPositionMF_04084789) - 1) AS ?thisPositionOn227) . BIND(?thisPositionOn227 AS ?thisPositionOn228) . BIND(?this AS ?pfs3t800) . BIND(URI(CONCAT(STR(?thisSequence), '#position', STR(?thisPositionOn227))) AS ?pfsb225) . BIND(URI(CONCAT(STR(?thisSequence), '#position', STR(?thisPositionOn228))) AS ?pfse226) . FILTER ((SUBSTR(?thisSequenceValue, ?thisPositionOn227, 1) = 'N')) . BIND(URI(CONCAT(STR(?this), '#MF_04084a224')) AS ?annotation224) . BIND(?this AS ?pfs223) . } OPTIONAL { ?this up:sequence ?thisSequence . ?thisSequence rdf:value ?thisSequenceValue . ?templateMotifMatch805 faldo:location ?templateMotifSequenceMatchRegionP08669806 ; edam:is_output_of ?templateMotifSequenceProfileAlignmentOperationP08669808 ; rdf:type edam:data_0869 ; rdf:value ?templateMotifCigarP08669MF_04084801 . ?templateMotifSequenceMatchRegionP08669806 faldo:begin ?templateMotifSequenceMatchBeginP08669807 . ?templateMotifSequenceMatchBeginP08669807 faldo:position ?templateMotifSequenceMatchBeginPositionP08669802 ; faldo:reference isoform:P08669-1 . ?templateMotifSequenceProfileAlignmentOperationP08669808 edam:has_input signature:MF_04084 ; rdf:type edam:operation_0300 . ?targetMotifMatch809 faldo:location ?targetMotifMatchRegionMatch810 ; edam:is_output_of ?targetMotifSequenceAlignmentOperationMF_04084812 ; rdf:type edam:data_0869 ; rdf:value ?targetMotifMatchCigarP08669MF_04084803 . ?targetMotifMatchRegionMatch810 faldo:begin ?targetMotifMatchRegionMatchBeginMF_04084811 . ?targetMotifMatchRegionMatchBeginMF_04084811 faldo:position ?targetMotifMatchRegionMatchBeginPositionMF_04084804 ; faldo:reference ?thisSequence . ?targetMotifSequenceAlignmentOperationMF_04084812 edam:has_input signature:MF_04084 ; rdf:type edam:operation_0300 . BIND(STRLEN(REPLACE(SUBSTR(?templateMotifCigarP08669MF_04084801, 1, (STRLEN(?templateMotifCigarP08669MF_04084801) - STRLEN(REPLACE(?templateMotifCigarP08669MF_04084801, CONCAT('^(?:-*[^-]){', STR(((119 - ?templateMotifSequenceMatchBeginPositionP08669802) + 1)), '}'), '')))), '[a-z]', '')) AS ?step1813) . BIND((STRLEN(SUBSTR(?targetMotifMatchCigarP08669MF_04084803, 1, (STRLEN(?targetMotifMatchCigarP08669MF_04084803) - STRLEN(REPLACE(?targetMotifMatchCigarP08669MF_04084803, CONCAT('^(?:[a-z]*(?:[A-Z]|-)){', STR(?step1813), '}'), ''))))) - STRLEN(REPLACE(SUBSTR(?targetMotifMatchCigarP08669MF_04084803, 1, (STRLEN(?targetMotifMatchCigarP08669MF_04084803) - STRLEN(REPLACE(?targetMotifMatchCigarP08669MF_04084803, CONCAT('^(?:[a-z]*(?:[A-Z]|-)){', STR(?step1813), '}'), '')))), '[^-]', ''))) AS ?step2814) . BIND(((?step2814 + ?targetMotifMatchRegionMatchBeginPositionMF_04084804) - 1) AS ?thisPositionOn233) . BIND(?thisPositionOn233 AS ?thisPositionOn234) . BIND(?this AS ?pfs3t815) . BIND(URI(CONCAT(STR(?thisSequence), '#position', STR(?thisPositionOn233))) AS ?pfsb231) . BIND(URI(CONCAT(STR(?thisSequence), '#position', STR(?thisPositionOn234))) AS ?pfse232) . FILTER ((SUBSTR(?thisSequenceValue, ?thisPositionOn233, 1) = 'N')) . BIND(URI(CONCAT(STR(?this), '#MF_04084a230')) AS ?annotation230) . BIND(?this AS ?pfs229) . } OPTIONAL { ?this up:sequence ?thisSequence . ?thisSequence rdf:value ?thisSequenceValue . ?templateMotifMatch820 faldo:location ?templateMotifSequenceMatchRegionP08669821 ; edam:is_output_of ?templateMotifSequenceProfileAlignmentOperationP08669823 ; rdf:type edam:data_0869 ; rdf:value ?templateMotifCigarP08669MF_04084816 . ?templateMotifSequenceMatchRegionP08669821 faldo:begin ?templateMotifSequenceMatchBeginP08669822 . ?templateMotifSequenceMatchBeginP08669822 faldo:position ?templateMotifSequenceMatchBeginPositionP08669817 ; faldo:reference isoform:P08669-1 . ?templateMotifSequenceProfileAlignmentOperationP08669823 edam:has_input signature:MF_04084 ; rdf:type edam:operation_0300 . ?targetMotifMatch824 faldo:location ?targetMotifMatchRegionMatch825 ; edam:is_output_of ?targetMotifSequenceAlignmentOperationMF_04084827 ; rdf:type edam:data_0869 ; rdf:value ?targetMotifMatchCigarP08669MF_04084818 . ?targetMotifMatchRegionMatch825 faldo:begin ?targetMotifMatchRegionMatchBeginMF_04084826 . ?targetMotifMatchRegionMatchBeginMF_04084826 faldo:position ?targetMotifMatchRegionMatchBeginPositionMF_04084819 ; faldo:reference ?thisSequence . ?targetMotifSequenceAlignmentOperationMF_04084827 edam:has_input signature:MF_04084 ; rdf:type edam:operation_0300 . BIND(STRLEN(REPLACE(SUBSTR(?templateMotifCigarP08669MF_04084816, 1, (STRLEN(?templateMotifCigarP08669MF_04084816) - STRLEN(REPLACE(?templateMotifCigarP08669MF_04084816, CONCAT('^(?:-*[^-]){', STR(((167 - ?templateMotifSequenceMatchBeginPositionP08669817) + 1)), '}'), '')))), '[a-z]', '')) AS ?step1828) . BIND((STRLEN(SUBSTR(?targetMotifMatchCigarP08669MF_04084818, 1, (STRLEN(?targetMotifMatchCigarP08669MF_04084818) - STRLEN(REPLACE(?targetMotifMatchCigarP08669MF_04084818, CONCAT('^(?:[a-z]*(?:[A-Z]|-)){', STR(?step1828), '}'), ''))))) - STRLEN(REPLACE(SUBSTR(?targetMotifMatchCigarP08669MF_04084818, 1, (STRLEN(?targetMotifMatchCigarP08669MF_04084818) - STRLEN(REPLACE(?targetMotifMatchCigarP08669MF_04084818, CONCAT('^(?:[a-z]*(?:[A-Z]|-)){', STR(?step1828), '}'), '')))), '[^-]', ''))) AS ?step2829) . BIND(((?step2829 + ?targetMotifMatchRegionMatchBeginPositionMF_04084819) - 1) AS ?thisPositionOn239) . BIND(?thisPositionOn239 AS ?thisPositionOn240) . BIND(?this AS ?pfs3t830) . BIND(URI(CONCAT(STR(?thisSequence), '#position', STR(?thisPositionOn239))) AS ?pfsb237) . BIND(URI(CONCAT(STR(?thisSequence), '#position', STR(?thisPositionOn240))) AS ?pfse238) . FILTER ((SUBSTR(?thisSequenceValue, ?thisPositionOn239, 1) = 'N')) . BIND(URI(CONCAT(STR(?this), '#MF_04084a236')) AS ?annotation236) . BIND(?this AS ?pfs235) . } OPTIONAL { ?this up:sequence ?thisSequence . ?thisSequence rdf:value ?thisSequenceValue . ?templateMotifMatch835 faldo:location ?templateMotifSequenceMatchRegionP08669836 ; edam:is_output_of ?templateMotifSequenceProfileAlignmentOperationP08669838 ; rdf:type edam:data_0869 ; rdf:value ?templateMotifCigarP08669MF_04084831 . ?templateMotifSequenceMatchRegionP08669836 faldo:begin ?templateMotifSequenceMatchBeginP08669837 . ?templateMotifSequenceMatchBeginP08669837 faldo:position ?templateMotifSequenceMatchBeginPositionP08669832 ; faldo:reference isoform:P08669-1 . ?templateMotifSequenceProfileAlignmentOperationP08669838 edam:has_input signature:MF_04084 ; rdf:type edam:operation_0300 . ?targetMotifMatch839 faldo:location ?targetMotifMatchRegionMatch840 ; edam:is_output_of ?targetMotifSequenceAlignmentOperationMF_04084842 ; rdf:type edam:data_0869 ; rdf:value ?targetMotifMatchCigarP08669MF_04084833 . ?targetMotifMatchRegionMatch840 faldo:begin ?targetMotifMatchRegionMatchBeginMF_04084841 . ?targetMotifMatchRegionMatchBeginMF_04084841 faldo:position ?targetMotifMatchRegionMatchBeginPositionMF_04084834 ; faldo:reference ?thisSequence . ?targetMotifSequenceAlignmentOperationMF_04084842 edam:has_input signature:MF_04084 ; rdf:type edam:operation_0300 . BIND(STRLEN(REPLACE(SUBSTR(?templateMotifCigarP08669MF_04084831, 1, (STRLEN(?templateMotifCigarP08669MF_04084831) - STRLEN(REPLACE(?templateMotifCigarP08669MF_04084831, CONCAT('^(?:-*[^-]){', STR(((224 - ?templateMotifSequenceMatchBeginPositionP08669832) + 1)), '}'), '')))), '[a-z]', '')) AS ?step1843) . BIND((STRLEN(SUBSTR(?targetMotifMatchCigarP08669MF_04084833, 1, (STRLEN(?targetMotifMatchCigarP08669MF_04084833) - STRLEN(REPLACE(?targetMotifMatchCigarP08669MF_04084833, CONCAT('^(?:[a-z]*(?:[A-Z]|-)){', STR(?step1843), '}'), ''))))) - STRLEN(REPLACE(SUBSTR(?targetMotifMatchCigarP08669MF_04084833, 1, (STRLEN(?targetMotifMatchCigarP08669MF_04084833) - STRLEN(REPLACE(?targetMotifMatchCigarP08669MF_04084833, CONCAT('^(?:[a-z]*(?:[A-Z]|-)){', STR(?step1843), '}'), '')))), '[^-]', ''))) AS ?step2844) . BIND(((?step2844 + ?targetMotifMatchRegionMatchBeginPositionMF_04084834) - 1) AS ?thisPositionOn245) . BIND(?thisPositionOn245 AS ?thisPositionOn246) . BIND(?this AS ?pfs3t845) . BIND(URI(CONCAT(STR(?thisSequence), '#position', STR(?thisPositionOn245))) AS ?pfsb243) . BIND(URI(CONCAT(STR(?thisSequence), '#position', STR(?thisPositionOn246))) AS ?pfse244) . FILTER ((SUBSTR(?thisSequenceValue, ?thisPositionOn245, 1) = 'N')) . BIND(URI(CONCAT(STR(?this), '#MF_04084a242')) AS ?annotation242) . BIND(?this AS ?pfs241) . } OPTIONAL { ?this up:sequence ?thisSequence . ?thisSequence rdf:value ?thisSequenceValue . ?templateMotifMatch850 faldo:location ?templateMotifSequenceMatchRegionP08669851 ; edam:is_output_of ?templateMotifSequenceProfileAlignmentOperationP08669853 ; rdf:type edam:data_0869 ; rdf:value ?templateMotifCigarP08669MF_04084846 . ?templateMotifSequenceMatchRegionP08669851 faldo:begin ?templateMotifSequenceMatchBeginP08669852 . ?templateMotifSequenceMatchBeginP08669852 faldo:position ?templateMotifSequenceMatchBeginPositionP08669847 ; faldo:reference isoform:P08669-1 . ?templateMotifSequenceProfileAlignmentOperationP08669853 edam:has_input signature:MF_04084 ; rdf:type edam:operation_0300 . ?targetMotifMatch854 faldo:location ?targetMotifMatchRegionMatch855 ; edam:is_output_of ?targetMotifSequenceAlignmentOperationMF_04084857 ; rdf:type edam:data_0869 ; rdf:value ?targetMotifMatchCigarP08669MF_04084848 . ?targetMotifMatchRegionMatch855 faldo:begin ?targetMotifMatchRegionMatchBeginMF_04084856 . ?targetMotifMatchRegionMatchBeginMF_04084856 faldo:position ?targetMotifMatchRegionMatchBeginPositionMF_04084849 ; faldo:reference ?thisSequence . ?targetMotifSequenceAlignmentOperationMF_04084857 edam:has_input signature:MF_04084 ; rdf:type edam:operation_0300 . BIND(STRLEN(REPLACE(SUBSTR(?templateMotifCigarP08669MF_04084846, 1, (STRLEN(?templateMotifCigarP08669MF_04084846) - STRLEN(REPLACE(?templateMotifCigarP08669MF_04084846, CONCAT('^(?:-*[^-]){', STR(((365 - ?templateMotifSequenceMatchBeginPositionP08669847) + 1)), '}'), '')))), '[a-z]', '')) AS ?step1858) . BIND((STRLEN(SUBSTR(?targetMotifMatchCigarP08669MF_04084848, 1, (STRLEN(?targetMotifMatchCigarP08669MF_04084848) - STRLEN(REPLACE(?targetMotifMatchCigarP08669MF_04084848, CONCAT('^(?:[a-z]*(?:[A-Z]|-)){', STR(?step1858), '}'), ''))))) - STRLEN(REPLACE(SUBSTR(?targetMotifMatchCigarP08669MF_04084848, 1, (STRLEN(?targetMotifMatchCigarP08669MF_04084848) - STRLEN(REPLACE(?targetMotifMatchCigarP08669MF_04084848, CONCAT('^(?:[a-z]*(?:[A-Z]|-)){', STR(?step1858), '}'), '')))), '[^-]', ''))) AS ?step2859) . BIND(((?step2859 + ?targetMotifMatchRegionMatchBeginPositionMF_04084849) - 1) AS ?thisPositionOn251) . BIND(?thisPositionOn251 AS ?thisPositionOn252) . BIND(?this AS ?pfs3t860) . BIND(URI(CONCAT(STR(?thisSequence), '#position', STR(?thisPositionOn251))) AS ?pfsb249) . BIND(URI(CONCAT(STR(?thisSequence), '#position', STR(?thisPositionOn252))) AS ?pfse250) . FILTER ((SUBSTR(?thisSequenceValue, ?thisPositionOn251, 1) = 'N')) . BIND(URI(CONCAT(STR(?this), '#MF_04084a248')) AS ?annotation248) . BIND(?this AS ?pfs247) . } OPTIONAL { ?this up:sequence ?thisSequence . ?thisSequence rdf:value ?thisSequenceValue . ?templateMotifMatch865 faldo:location ?templateMotifSequenceMatchRegionP08669866 ; edam:is_output_of ?templateMotifSequenceProfileAlignmentOperationP08669868 ; rdf:type edam:data_0869 ; rdf:value ?templateMotifCigarP08669MF_04084861 . ?templateMotifSequenceMatchRegionP08669866 faldo:begin ?templateMotifSequenceMatchBeginP08669867 . ?templateMotifSequenceMatchBeginP08669867 faldo:position ?templateMotifSequenceMatchBeginPositionP08669862 ; faldo:reference isoform:P08669-1 . ?templateMotifSequenceProfileAlignmentOperationP08669868 edam:has_input signature:MF_04084 ; rdf:type edam:operation_0300 . ?targetMotifMatch869 faldo:location ?targetMotifMatchRegionMatch870 ; edam:is_output_of ?targetMotifSequenceAlignmentOperationMF_04084872 ; rdf:type edam:data_0869 ; rdf:value ?targetMotifMatchCigarP08669MF_04084863 . ?targetMotifMatchRegionMatch870 faldo:begin ?targetMotifMatchRegionMatchBeginMF_04084871 . ?targetMotifMatchRegionMatchBeginMF_04084871 faldo:position ?targetMotifMatchRegionMatchBeginPositionMF_04084864 ; faldo:reference ?thisSequence . ?targetMotifSequenceAlignmentOperationMF_04084872 edam:has_input signature:MF_04084 ; rdf:type edam:operation_0300 . BIND(STRLEN(REPLACE(SUBSTR(?templateMotifCigarP08669MF_04084861, 1, (STRLEN(?templateMotifCigarP08669MF_04084861) - STRLEN(REPLACE(?templateMotifCigarP08669MF_04084861, CONCAT('^(?:-*[^-]){', STR(((373 - ?templateMotifSequenceMatchBeginPositionP08669862) + 1)), '}'), '')))), '[a-z]', '')) AS ?step1873) . BIND((STRLEN(SUBSTR(?targetMotifMatchCigarP08669MF_04084863, 1, (STRLEN(?targetMotifMatchCigarP08669MF_04084863) - STRLEN(REPLACE(?targetMotifMatchCigarP08669MF_04084863, CONCAT('^(?:[a-z]*(?:[A-Z]|-)){', STR(?step1873), '}'), ''))))) - STRLEN(REPLACE(SUBSTR(?targetMotifMatchCigarP08669MF_04084863, 1, (STRLEN(?targetMotifMatchCigarP08669MF_04084863) - STRLEN(REPLACE(?targetMotifMatchCigarP08669MF_04084863, CONCAT('^(?:[a-z]*(?:[A-Z]|-)){', STR(?step1873), '}'), '')))), '[^-]', ''))) AS ?step2874) . BIND(((?step2874 + ?targetMotifMatchRegionMatchBeginPositionMF_04084864) - 1) AS ?thisPositionOn257) . BIND(?thisPositionOn257 AS ?thisPositionOn258) . BIND(?this AS ?pfs3t875) . BIND(URI(CONCAT(STR(?thisSequence), '#position', STR(?thisPositionOn257))) AS ?pfsb255) . BIND(URI(CONCAT(STR(?thisSequence), '#position', STR(?thisPositionOn258))) AS ?pfse256) . FILTER ((SUBSTR(?thisSequenceValue, ?thisPositionOn257, 1) = 'N')) . BIND(URI(CONCAT(STR(?this), '#MF_04084a254')) AS ?annotation254) . BIND(?this AS ?pfs253) . } OPTIONAL { ?this up:sequence ?thisSequence . ?thisSequence rdf:value ?thisSequenceValue . ?templateMotifMatch880 faldo:location ?templateMotifSequenceMatchRegionP08669881 ; edam:is_output_of ?templateMotifSequenceProfileAlignmentOperationP08669883 ; rdf:type edam:data_0869 ; rdf:value ?templateMotifCigarP08669MF_04084876 . ?templateMotifSequenceMatchRegionP08669881 faldo:begin ?templateMotifSequenceMatchBeginP08669882 . ?templateMotifSequenceMatchBeginP08669882 faldo:position ?templateMotifSequenceMatchBeginPositionP08669877 ; faldo:reference isoform:P08669-1 . ?templateMotifSequenceProfileAlignmentOperationP08669883 edam:has_input signature:MF_04084 ; rdf:type edam:operation_0300 . ?targetMotifMatch884 faldo:location ?targetMotifMatchRegionMatch885 ; edam:is_output_of ?targetMotifSequenceAlignmentOperationMF_04084887 ; rdf:type edam:data_0869 ; rdf:value ?targetMotifMatchCigarP08669MF_04084878 . ?targetMotifMatchRegionMatch885 faldo:begin ?targetMotifMatchRegionMatchBeginMF_04084886 . ?targetMotifMatchRegionMatchBeginMF_04084886 faldo:position ?targetMotifMatchRegionMatchBeginPositionMF_04084879 ; faldo:reference ?thisSequence . ?targetMotifSequenceAlignmentOperationMF_04084887 edam:has_input signature:MF_04084 ; rdf:type edam:operation_0300 . BIND(STRLEN(REPLACE(SUBSTR(?templateMotifCigarP08669MF_04084876, 1, (STRLEN(?templateMotifCigarP08669MF_04084876) - STRLEN(REPLACE(?templateMotifCigarP08669MF_04084876, CONCAT('^(?:-*[^-]){', STR(((390 - ?templateMotifSequenceMatchBeginPositionP08669877) + 1)), '}'), '')))), '[a-z]', '')) AS ?step1888) . BIND((STRLEN(SUBSTR(?targetMotifMatchCigarP08669MF_04084878, 1, (STRLEN(?targetMotifMatchCigarP08669MF_04084878) - STRLEN(REPLACE(?targetMotifMatchCigarP08669MF_04084878, CONCAT('^(?:[a-z]*(?:[A-Z]|-)){', STR(?step1888), '}'), ''))))) - STRLEN(REPLACE(SUBSTR(?targetMotifMatchCigarP08669MF_04084878, 1, (STRLEN(?targetMotifMatchCigarP08669MF_04084878) - STRLEN(REPLACE(?targetMotifMatchCigarP08669MF_04084878, CONCAT('^(?:[a-z]*(?:[A-Z]|-)){', STR(?step1888), '}'), '')))), '[^-]', ''))) AS ?step2889) . BIND(((?step2889 + ?targetMotifMatchRegionMatchBeginPositionMF_04084879) - 1) AS ?thisPositionOn263) . BIND(?thisPositionOn263 AS ?thisPositionOn264) . BIND(?this AS ?pfs3t890) . BIND(URI(CONCAT(STR(?thisSequence), '#position', STR(?thisPositionOn263))) AS ?pfsb261) . BIND(URI(CONCAT(STR(?thisSequence), '#position', STR(?thisPositionOn264))) AS ?pfse262) . FILTER ((SUBSTR(?thisSequenceValue, ?thisPositionOn263, 1) = 'N')) . BIND(URI(CONCAT(STR(?this), '#MF_04084a260')) AS ?annotation260) . BIND(?this AS ?pfs259) . } OPTIONAL { ?this up:sequence ?thisSequence . ?thisSequence rdf:value ?thisSequenceValue . ?templateMotifMatch895 faldo:location ?templateMotifSequenceMatchRegionP08669896 ; edam:is_output_of ?templateMotifSequenceProfileAlignmentOperationP08669898 ; rdf:type edam:data_0869 ; rdf:value ?templateMotifCigarP08669MF_04084891 . ?templateMotifSequenceMatchRegionP08669896 faldo:begin ?templateMotifSequenceMatchBeginP08669897 . ?templateMotifSequenceMatchBeginP08669897 faldo:position ?templateMotifSequenceMatchBeginPositionP08669892 ; faldo:reference isoform:P08669-1 . ?templateMotifSequenceProfileAlignmentOperationP08669898 edam:has_input signature:MF_04084 ; rdf:type edam:operation_0300 . ?targetMotifMatch899 faldo:location ?targetMotifMatchRegionMatch900 ; edam:is_output_of ?targetMotifSequenceAlignmentOperationMF_04084902 ; rdf:type edam:data_0869 ; rdf:value ?targetMotifMatchCigarP08669MF_04084893 . ?targetMotifMatchRegionMatch900 faldo:begin ?targetMotifMatchRegionMatchBeginMF_04084901 . ?targetMotifMatchRegionMatchBeginMF_04084901 faldo:position ?targetMotifMatchRegionMatchBeginPositionMF_04084894 ; faldo:reference ?thisSequence . ?targetMotifSequenceAlignmentOperationMF_04084902 edam:has_input signature:MF_04084 ; rdf:type edam:operation_0300 . BIND(STRLEN(REPLACE(SUBSTR(?templateMotifCigarP08669MF_04084891, 1, (STRLEN(?templateMotifCigarP08669MF_04084891) - STRLEN(REPLACE(?templateMotifCigarP08669MF_04084891, CONCAT('^(?:-*[^-]){', STR(((395 - ?templateMotifSequenceMatchBeginPositionP08669892) + 1)), '}'), '')))), '[a-z]', '')) AS ?step1903) . BIND((STRLEN(SUBSTR(?targetMotifMatchCigarP08669MF_04084893, 1, (STRLEN(?targetMotifMatchCigarP08669MF_04084893) - STRLEN(REPLACE(?targetMotifMatchCigarP08669MF_04084893, CONCAT('^(?:[a-z]*(?:[A-Z]|-)){', STR(?step1903), '}'), ''))))) - STRLEN(REPLACE(SUBSTR(?targetMotifMatchCigarP08669MF_04084893, 1, (STRLEN(?targetMotifMatchCigarP08669MF_04084893) - STRLEN(REPLACE(?targetMotifMatchCigarP08669MF_04084893, CONCAT('^(?:[a-z]*(?:[A-Z]|-)){', STR(?step1903), '}'), '')))), '[^-]', ''))) AS ?step2904) . BIND(((?step2904 + ?targetMotifMatchRegionMatchBeginPositionMF_04084894) - 1) AS ?thisPositionOn269) . BIND(?thisPositionOn269 AS ?thisPositionOn270) . BIND(?this AS ?pfs3t905) . BIND(URI(CONCAT(STR(?thisSequence), '#position', STR(?thisPositionOn269))) AS ?pfsb267) . BIND(URI(CONCAT(STR(?thisSequence), '#position', STR(?thisPositionOn270))) AS ?pfse268) . FILTER ((SUBSTR(?thisSequenceValue, ?thisPositionOn269, 1) = 'N')) . BIND(URI(CONCAT(STR(?this), '#MF_04084a266')) AS ?annotation266) . BIND(?this AS ?pfs265) . } OPTIONAL { ?this up:sequence ?thisSequence . ?thisSequence rdf:value ?thisSequenceValue . ?templateMotifMatch910 faldo:location ?templateMotifSequenceMatchRegionP08669911 ; edam:is_output_of ?templateMotifSequenceProfileAlignmentOperationP08669913 ; rdf:type edam:data_0869 ; rdf:value ?templateMotifCigarP08669MF_04084906 . ?templateMotifSequenceMatchRegionP08669911 faldo:begin ?templateMotifSequenceMatchBeginP08669912 . ?templateMotifSequenceMatchBeginP08669912 faldo:position ?templateMotifSequenceMatchBeginPositionP08669907 ; faldo:reference isoform:P08669-1 . ?templateMotifSequenceProfileAlignmentOperationP08669913 edam:has_input signature:MF_04084 ; rdf:type edam:operation_0300 . ?targetMotifMatch914 faldo:location ?targetMotifMatchRegionMatch915 ; edam:is_output_of ?targetMotifSequenceAlignmentOperationMF_04084917 ; rdf:type edam:data_0869 ; rdf:value ?targetMotifMatchCigarP08669MF_04084908 . ?targetMotifMatchRegionMatch915 faldo:begin ?targetMotifMatchRegionMatchBeginMF_04084916 . ?targetMotifMatchRegionMatchBeginMF_04084916 faldo:position ?targetMotifMatchRegionMatchBeginPositionMF_04084909 ; faldo:reference ?thisSequence . ?targetMotifSequenceAlignmentOperationMF_04084917 edam:has_input signature:MF_04084 ; rdf:type edam:operation_0300 . BIND(STRLEN(REPLACE(SUBSTR(?templateMotifCigarP08669MF_04084906, 1, (STRLEN(?templateMotifCigarP08669MF_04084906) - STRLEN(REPLACE(?templateMotifCigarP08669MF_04084906, CONCAT('^(?:-*[^-]){', STR(((86 - ?templateMotifSequenceMatchBeginPositionP08669907) + 1)), '}'), '')))), '[a-z]', '')) AS ?step1918) . BIND((STRLEN(SUBSTR(?targetMotifMatchCigarP08669MF_04084908, 1, (STRLEN(?targetMotifMatchCigarP08669MF_04084908) - STRLEN(REPLACE(?targetMotifMatchCigarP08669MF_04084908, CONCAT('^(?:[a-z]*(?:[A-Z]|-)){', STR(?step1918), '}'), ''))))) - STRLEN(REPLACE(SUBSTR(?targetMotifMatchCigarP08669MF_04084908, 1, (STRLEN(?targetMotifMatchCigarP08669MF_04084908) - STRLEN(REPLACE(?targetMotifMatchCigarP08669MF_04084908, CONCAT('^(?:[a-z]*(?:[A-Z]|-)){', STR(?step1918), '}'), '')))), '[^-]', ''))) AS ?step2919) . BIND(((?step2919 + ?targetMotifMatchRegionMatchBeginPositionMF_04084909) - 1) AS ?thisPositionOn275) . BIND(STRLEN(REPLACE(SUBSTR(?templateMotifCigarP08669MF_04084906, 1, (STRLEN(?templateMotifCigarP08669MF_04084906) - STRLEN(REPLACE(?templateMotifCigarP08669MF_04084906, CONCAT('^(?:-*[^-]){', STR(((231 - ?templateMotifSequenceMatchBeginPositionP08669907) + 1)), '}'), '')))), '[a-z]', '')) AS ?step1920) . BIND((STRLEN(SUBSTR(?targetMotifMatchCigarP08669MF_04084908, 1, (STRLEN(?targetMotifMatchCigarP08669MF_04084908) - STRLEN(REPLACE(?targetMotifMatchCigarP08669MF_04084908, CONCAT('^(?:[a-z]*(?:[A-Z]|-)){', STR(?step1920), '}'), ''))))) - STRLEN(REPLACE(SUBSTR(?targetMotifMatchCigarP08669MF_04084908, 1, (STRLEN(?targetMotifMatchCigarP08669MF_04084908) - STRLEN(REPLACE(?targetMotifMatchCigarP08669MF_04084908, CONCAT('^(?:[a-z]*(?:[A-Z]|-)){', STR(?step1920), '}'), '')))), '[^-]', ''))) AS ?step2921) . BIND(((?step2921 + ?targetMotifMatchRegionMatchBeginPositionMF_04084909) - 1) AS ?thisPositionOn276) . BIND(?this AS ?pfs3t922) . BIND(URI(CONCAT(STR(?thisSequence), '#position', STR(?thisPositionOn275))) AS ?pfsb273) . BIND(URI(CONCAT(STR(?thisSequence), '#position', STR(?thisPositionOn276))) AS ?pfse274) . FILTER (REGEX('C[ARNDCQEGHILKMFPSTWYVBZJUOX]*C', SUBSTR(?thisSequenceValue, ?thisPositionOn275, (?thisPositionOn276 - ?thisPositionOn275)))) . BIND(URI(CONCAT(STR(?this), '#MF_04084a272')) AS ?annotation272) . BIND(?this AS ?pfs271) . } OPTIONAL { ?this up:sequence ?thisSequence . ?thisSequence rdf:value ?thisSequenceValue . ?templateMotifMatch927 faldo:location ?templateMotifSequenceMatchRegionP08669928 ; edam:is_output_of ?templateMotifSequenceProfileAlignmentOperationP08669930 ; rdf:type edam:data_0869 ; rdf:value ?templateMotifCigarP08669MF_04084923 . ?templateMotifSequenceMatchRegionP08669928 faldo:begin ?templateMotifSequenceMatchBeginP08669929 . ?templateMotifSequenceMatchBeginP08669929 faldo:position ?templateMotifSequenceMatchBeginPositionP08669924 ; faldo:reference isoform:P08669-1 . ?templateMotifSequenceProfileAlignmentOperationP08669930 edam:has_input signature:MF_04084 ; rdf:type edam:operation_0300 . ?targetMotifMatch931 faldo:location ?targetMotifMatchRegionMatch932 ; edam:is_output_of ?targetMotifSequenceAlignmentOperationMF_04084934 ; rdf:type edam:data_0869 ; rdf:value ?targetMotifMatchCigarP08669MF_04084925 . ?targetMotifMatchRegionMatch932 faldo:begin ?targetMotifMatchRegionMatchBeginMF_04084933 . ?targetMotifMatchRegionMatchBeginMF_04084933 faldo:position ?targetMotifMatchRegionMatchBeginPositionMF_04084926 ; faldo:reference ?thisSequence . ?targetMotifSequenceAlignmentOperationMF_04084934 edam:has_input signature:MF_04084 ; rdf:type edam:operation_0300 . BIND(STRLEN(REPLACE(SUBSTR(?templateMotifCigarP08669MF_04084923, 1, (STRLEN(?templateMotifCigarP08669MF_04084923) - STRLEN(REPLACE(?templateMotifCigarP08669MF_04084923, CONCAT('^(?:-*[^-]){', STR(((118 - ?templateMotifSequenceMatchBeginPositionP08669924) + 1)), '}'), '')))), '[a-z]', '')) AS ?step1935) . BIND((STRLEN(SUBSTR(?targetMotifMatchCigarP08669MF_04084925, 1, (STRLEN(?targetMotifMatchCigarP08669MF_04084925) - STRLEN(REPLACE(?targetMotifMatchCigarP08669MF_04084925, CONCAT('^(?:[a-z]*(?:[A-Z]|-)){', STR(?step1935), '}'), ''))))) - STRLEN(REPLACE(SUBSTR(?targetMotifMatchCigarP08669MF_04084925, 1, (STRLEN(?targetMotifMatchCigarP08669MF_04084925) - STRLEN(REPLACE(?targetMotifMatchCigarP08669MF_04084925, CONCAT('^(?:[a-z]*(?:[A-Z]|-)){', STR(?step1935), '}'), '')))), '[^-]', ''))) AS ?step2936) . BIND(((?step2936 + ?targetMotifMatchRegionMatchBeginPositionMF_04084926) - 1) AS ?thisPositionOn281) . BIND(STRLEN(REPLACE(SUBSTR(?templateMotifCigarP08669MF_04084923, 1, (STRLEN(?templateMotifCigarP08669MF_04084923) - STRLEN(REPLACE(?templateMotifCigarP08669MF_04084923, CONCAT('^(?:-*[^-]){', STR(((155 - ?templateMotifSequenceMatchBeginPositionP08669924) + 1)), '}'), '')))), '[a-z]', '')) AS ?step1937) . BIND((STRLEN(SUBSTR(?targetMotifMatchCigarP08669MF_04084925, 1, (STRLEN(?targetMotifMatchCigarP08669MF_04084925) - STRLEN(REPLACE(?targetMotifMatchCigarP08669MF_04084925, CONCAT('^(?:[a-z]*(?:[A-Z]|-)){', STR(?step1937), '}'), ''))))) - STRLEN(REPLACE(SUBSTR(?targetMotifMatchCigarP08669MF_04084925, 1, (STRLEN(?targetMotifMatchCigarP08669MF_04084925) - STRLEN(REPLACE(?targetMotifMatchCigarP08669MF_04084925, CONCAT('^(?:[a-z]*(?:[A-Z]|-)){', STR(?step1937), '}'), '')))), '[^-]', ''))) AS ?step2938) . BIND(((?step2938 + ?targetMotifMatchRegionMatchBeginPositionMF_04084926) - 1) AS ?thisPositionOn282) . BIND(?this AS ?pfs3t939) . BIND(URI(CONCAT(STR(?thisSequence), '#position', STR(?thisPositionOn281))) AS ?pfsb279) . BIND(URI(CONCAT(STR(?thisSequence), '#position', STR(?thisPositionOn282))) AS ?pfse280) . FILTER (REGEX('C[ARNDCQEGHILKMFPSTWYVBZJUOX]*C', SUBSTR(?thisSequenceValue, ?thisPositionOn281, (?thisPositionOn282 - ?thisPositionOn281)))) . BIND(URI(CONCAT(STR(?this), '#MF_04084a278')) AS ?annotation278) . BIND(?this AS ?pfs277) . } OPTIONAL { ?this up:sequence ?thisSequence . ?thisSequence rdf:value ?thisSequenceValue . ?templateMotifMatch944 faldo:location ?templateMotifSequenceMatchRegionP08669945 ; edam:is_output_of ?templateMotifSequenceProfileAlignmentOperationP08669947 ; rdf:type edam:data_0869 ; rdf:value ?templateMotifCigarP08669MF_04084940 . ?templateMotifSequenceMatchRegionP08669945 faldo:begin ?templateMotifSequenceMatchBeginP08669946 . ?templateMotifSequenceMatchBeginP08669946 faldo:position ?templateMotifSequenceMatchBeginPositionP08669941 ; faldo:reference isoform:P08669-1 . ?templateMotifSequenceProfileAlignmentOperationP08669947 edam:has_input signature:MF_04084 ; rdf:type edam:operation_0300 . ?targetMotifMatch948 faldo:location ?targetMotifMatchRegionMatch949 ; edam:is_output_of ?targetMotifSequenceAlignmentOperationMF_04084951 ; rdf:type edam:data_0869 ; rdf:value ?targetMotifMatchCigarP08669MF_04084942 . ?targetMotifMatchRegionMatch949 faldo:begin ?targetMotifMatchRegionMatchBeginMF_04084950 . ?targetMotifMatchRegionMatchBeginMF_04084950 faldo:position ?targetMotifMatchRegionMatchBeginPositionMF_04084943 ; faldo:reference ?thisSequence . ?targetMotifSequenceAlignmentOperationMF_04084951 edam:has_input signature:MF_04084 ; rdf:type edam:operation_0300 . BIND(STRLEN(REPLACE(SUBSTR(?templateMotifCigarP08669MF_04084940, 1, (STRLEN(?templateMotifCigarP08669MF_04084940) - STRLEN(REPLACE(?templateMotifCigarP08669MF_04084940, CONCAT('^(?:-*[^-]){', STR(((180 - ?templateMotifSequenceMatchBeginPositionP08669941) + 1)), '}'), '')))), '[a-z]', '')) AS ?step1952) . BIND((STRLEN(SUBSTR(?targetMotifMatchCigarP08669MF_04084942, 1, (STRLEN(?targetMotifMatchCigarP08669MF_04084942) - STRLEN(REPLACE(?targetMotifMatchCigarP08669MF_04084942, CONCAT('^(?:[a-z]*(?:[A-Z]|-)){', STR(?step1952), '}'), ''))))) - STRLEN(REPLACE(SUBSTR(?targetMotifMatchCigarP08669MF_04084942, 1, (STRLEN(?targetMotifMatchCigarP08669MF_04084942) - STRLEN(REPLACE(?targetMotifMatchCigarP08669MF_04084942, CONCAT('^(?:[a-z]*(?:[A-Z]|-)){', STR(?step1952), '}'), '')))), '[^-]', ''))) AS ?step2953) . BIND(((?step2953 + ?targetMotifMatchRegionMatchBeginPositionMF_04084943) - 1) AS ?thisPositionOn287) . BIND(STRLEN(REPLACE(SUBSTR(?templateMotifCigarP08669MF_04084940, 1, (STRLEN(?templateMotifCigarP08669MF_04084940) - STRLEN(REPLACE(?templateMotifCigarP08669MF_04084940, CONCAT('^(?:-*[^-]){', STR(((212 - ?templateMotifSequenceMatchBeginPositionP08669941) + 1)), '}'), '')))), '[a-z]', '')) AS ?step1954) . BIND((STRLEN(SUBSTR(?targetMotifMatchCigarP08669MF_04084942, 1, (STRLEN(?targetMotifMatchCigarP08669MF_04084942) - STRLEN(REPLACE(?targetMotifMatchCigarP08669MF_04084942, CONCAT('^(?:[a-z]*(?:[A-Z]|-)){', STR(?step1954), '}'), ''))))) - STRLEN(REPLACE(SUBSTR(?targetMotifMatchCigarP08669MF_04084942, 1, (STRLEN(?targetMotifMatchCigarP08669MF_04084942) - STRLEN(REPLACE(?targetMotifMatchCigarP08669MF_04084942, CONCAT('^(?:[a-z]*(?:[A-Z]|-)){', STR(?step1954), '}'), '')))), '[^-]', ''))) AS ?step2955) . BIND(((?step2955 + ?targetMotifMatchRegionMatchBeginPositionMF_04084943) - 1) AS ?thisPositionOn288) . BIND(?this AS ?pfs3t956) . BIND(URI(CONCAT(STR(?thisSequence), '#position', STR(?thisPositionOn287))) AS ?pfsb285) . BIND(URI(CONCAT(STR(?thisSequence), '#position', STR(?thisPositionOn288))) AS ?pfse286) . FILTER (REGEX('C[ARNDCQEGHILKMFPSTWYVBZJUOX]*C', SUBSTR(?thisSequenceValue, ?thisPositionOn287, (?thisPositionOn288 - ?thisPositionOn287)))) . BIND(URI(CONCAT(STR(?this), '#MF_04084a284')) AS ?annotation284) . BIND(?this AS ?pfs283) . } OPTIONAL { ?this up:sequence ?thisSequence . ?thisSequence rdf:value ?thisSequenceValue . ?templateMotifMatch961 faldo:location ?templateMotifSequenceMatchRegionP08669962 ; edam:is_output_of ?templateMotifSequenceProfileAlignmentOperationP08669964 ; rdf:type edam:data_0869 ; rdf:value ?templateMotifCigarP08669MF_04084957 . ?templateMotifSequenceMatchRegionP08669962 faldo:begin ?templateMotifSequenceMatchBeginP08669963 . ?templateMotifSequenceMatchBeginP08669963 faldo:position ?templateMotifSequenceMatchBeginPositionP08669958 ; faldo:reference isoform:P08669-1 . ?templateMotifSequenceProfileAlignmentOperationP08669964 edam:has_input signature:MF_04084 ; rdf:type edam:operation_0300 . ?targetMotifMatch965 faldo:location ?targetMotifMatchRegionMatch966 ; edam:is_output_of ?targetMotifSequenceAlignmentOperationMF_04084968 ; rdf:type edam:data_0869 ; rdf:value ?targetMotifMatchCigarP08669MF_04084959 . ?targetMotifMatchRegionMatch966 faldo:begin ?targetMotifMatchRegionMatchBeginMF_04084967 . ?targetMotifMatchRegionMatchBeginMF_04084967 faldo:position ?targetMotifMatchRegionMatchBeginPositionMF_04084960 ; faldo:reference ?thisSequence . ?targetMotifSequenceAlignmentOperationMF_04084968 edam:has_input signature:MF_04084 ; rdf:type edam:operation_0300 . BIND(STRLEN(REPLACE(SUBSTR(?templateMotifCigarP08669MF_04084957, 1, (STRLEN(?templateMotifCigarP08669MF_04084957) - STRLEN(REPLACE(?templateMotifCigarP08669MF_04084957, CONCAT('^(?:-*[^-]){', STR(((180 - ?templateMotifSequenceMatchBeginPositionP08669958) + 1)), '}'), '')))), '[a-z]', '')) AS ?step1969) . BIND((STRLEN(SUBSTR(?targetMotifMatchCigarP08669MF_04084959, 1, (STRLEN(?targetMotifMatchCigarP08669MF_04084959) - STRLEN(REPLACE(?targetMotifMatchCigarP08669MF_04084959, CONCAT('^(?:[a-z]*(?:[A-Z]|-)){', STR(?step1969), '}'), ''))))) - STRLEN(REPLACE(SUBSTR(?targetMotifMatchCigarP08669MF_04084959, 1, (STRLEN(?targetMotifMatchCigarP08669MF_04084959) - STRLEN(REPLACE(?targetMotifMatchCigarP08669MF_04084959, CONCAT('^(?:[a-z]*(?:[A-Z]|-)){', STR(?step1969), '}'), '')))), '[^-]', ''))) AS ?step2970) . BIND(((?step2970 + ?targetMotifMatchRegionMatchBeginPositionMF_04084960) - 1) AS ?thisPositionOn293) . BIND(STRLEN(REPLACE(SUBSTR(?templateMotifCigarP08669MF_04084957, 1, (STRLEN(?templateMotifCigarP08669MF_04084957) - STRLEN(REPLACE(?templateMotifCigarP08669MF_04084957, CONCAT('^(?:-*[^-]){', STR(((212 - ?templateMotifSequenceMatchBeginPositionP08669958) + 1)), '}'), '')))), '[a-z]', '')) AS ?step1971) . BIND((STRLEN(SUBSTR(?targetMotifMatchCigarP08669MF_04084959, 1, (STRLEN(?targetMotifMatchCigarP08669MF_04084959) - STRLEN(REPLACE(?targetMotifMatchCigarP08669MF_04084959, CONCAT('^(?:[a-z]*(?:[A-Z]|-)){', STR(?step1971), '}'), ''))))) - STRLEN(REPLACE(SUBSTR(?targetMotifMatchCigarP08669MF_04084959, 1, (STRLEN(?targetMotifMatchCigarP08669MF_04084959) - STRLEN(REPLACE(?targetMotifMatchCigarP08669MF_04084959, CONCAT('^(?:[a-z]*(?:[A-Z]|-)){', STR(?step1971), '}'), '')))), '[^-]', ''))) AS ?step2972) . BIND(((?step2972 + ?targetMotifMatchRegionMatchBeginPositionMF_04084960) - 1) AS ?thisPositionOn294) . BIND(?this AS ?pfs3t973) . BIND(URI(CONCAT(STR(?thisSequence), '#position', STR(?thisPositionOn293))) AS ?pfsb291) . BIND(URI(CONCAT(STR(?thisSequence), '#position', STR(?thisPositionOn294))) AS ?pfse292) . FILTER (REGEX('C[ARNDCQEGHILKMFPSTWYVBZJUOX]*C', SUBSTR(?thisSequenceValue, ?thisPositionOn293, (?thisPositionOn294 - ?thisPositionOn293)))) . BIND(URI(CONCAT(STR(?this), '#MF_04084a290')) AS ?annotation290) . BIND(?this AS ?pfs289) . } OPTIONAL { ?this up:sequence ?thisSequence . ?thisSequence rdf:value ?thisSequenceValue . ?templateMotifMatch978 faldo:location ?templateMotifSequenceMatchRegionP08669979 ; edam:is_output_of ?templateMotifSequenceProfileAlignmentOperationP08669981 ; rdf:type edam:data_0869 ; rdf:value ?templateMotifCigarP08669MF_04084974 . ?templateMotifSequenceMatchRegionP08669979 faldo:begin ?templateMotifSequenceMatchBeginP08669980 . ?templateMotifSequenceMatchBeginP08669980 faldo:position ?templateMotifSequenceMatchBeginPositionP08669975 ; faldo:reference isoform:P08669-1 . ?templateMotifSequenceProfileAlignmentOperationP08669981 edam:has_input signature:MF_04084 ; rdf:type edam:operation_0300 . ?targetMotifMatch982 faldo:location ?targetMotifMatchRegionMatch983 ; edam:is_output_of ?targetMotifSequenceAlignmentOperationMF_04084985 ; rdf:type edam:data_0869 ; rdf:value ?targetMotifMatchCigarP08669MF_04084976 . ?targetMotifMatchRegionMatch983 faldo:begin ?targetMotifMatchRegionMatchBeginMF_04084984 . ?targetMotifMatchRegionMatchBeginMF_04084984 faldo:position ?targetMotifMatchRegionMatchBeginPositionMF_04084977 ; faldo:reference ?thisSequence . ?targetMotifSequenceAlignmentOperationMF_04084985 edam:has_input signature:MF_04084 ; rdf:type edam:operation_0300 . BIND(STRLEN(REPLACE(SUBSTR(?templateMotifCigarP08669MF_04084974, 1, (STRLEN(?templateMotifCigarP08669MF_04084974) - STRLEN(REPLACE(?templateMotifCigarP08669MF_04084974, CONCAT('^(?:-*[^-]){', STR(((279 - ?templateMotifSequenceMatchBeginPositionP08669975) + 1)), '}'), '')))), '[a-z]', '')) AS ?step1986) . BIND((STRLEN(SUBSTR(?targetMotifMatchCigarP08669MF_04084976, 1, (STRLEN(?targetMotifMatchCigarP08669MF_04084976) - STRLEN(REPLACE(?targetMotifMatchCigarP08669MF_04084976, CONCAT('^(?:[a-z]*(?:[A-Z]|-)){', STR(?step1986), '}'), ''))))) - STRLEN(REPLACE(SUBSTR(?targetMotifMatchCigarP08669MF_04084976, 1, (STRLEN(?targetMotifMatchCigarP08669MF_04084976) - STRLEN(REPLACE(?targetMotifMatchCigarP08669MF_04084976, CONCAT('^(?:[a-z]*(?:[A-Z]|-)){', STR(?step1986), '}'), '')))), '[^-]', ''))) AS ?step2987) . BIND(((?step2987 + ?targetMotifMatchRegionMatchBeginPositionMF_04084977) - 1) AS ?thisPositionOn299) . BIND(STRLEN(REPLACE(SUBSTR(?templateMotifCigarP08669MF_04084974, 1, (STRLEN(?templateMotifCigarP08669MF_04084974) - STRLEN(REPLACE(?templateMotifCigarP08669MF_04084974, CONCAT('^(?:-*[^-]){', STR(((292 - ?templateMotifSequenceMatchBeginPositionP08669975) + 1)), '}'), '')))), '[a-z]', '')) AS ?step1988) . BIND((STRLEN(SUBSTR(?targetMotifMatchCigarP08669MF_04084976, 1, (STRLEN(?targetMotifMatchCigarP08669MF_04084976) - STRLEN(REPLACE(?targetMotifMatchCigarP08669MF_04084976, CONCAT('^(?:[a-z]*(?:[A-Z]|-)){', STR(?step1988), '}'), ''))))) - STRLEN(REPLACE(SUBSTR(?targetMotifMatchCigarP08669MF_04084976, 1, (STRLEN(?targetMotifMatchCigarP08669MF_04084976) - STRLEN(REPLACE(?targetMotifMatchCigarP08669MF_04084976, CONCAT('^(?:[a-z]*(?:[A-Z]|-)){', STR(?step1988), '}'), '')))), '[^-]', ''))) AS ?step2989) . BIND(((?step2989 + ?targetMotifMatchRegionMatchBeginPositionMF_04084977) - 1) AS ?thisPositionOn300) . BIND(?this AS ?pfs3t990) . BIND(URI(CONCAT(STR(?thisSequence), '#position', STR(?thisPositionOn299))) AS ?pfsb297) . BIND(URI(CONCAT(STR(?thisSequence), '#position', STR(?thisPositionOn300))) AS ?pfse298) . FILTER (REGEX('C[ARNDCQEGHILKMFPSTWYVBZJUOX]*C', SUBSTR(?thisSequenceValue, ?thisPositionOn299, (?thisPositionOn300 - ?thisPositionOn299)))) . BIND(URI(CONCAT(STR(?this), '#MF_04084a296')) AS ?annotation296) . BIND(?this AS ?pfs295) . } OPTIONAL { ?this up:sequence ?thisSequence . ?thisSequence rdf:value ?thisSequenceValue . ?templateMotifMatch995 faldo:location ?templateMotifSequenceMatchRegionP08669996 ; edam:is_output_of ?templateMotifSequenceProfileAlignmentOperationP08669998 ; rdf:type edam:data_0869 ; rdf:value ?templateMotifCigarP08669MF_04084991 . ?templateMotifSequenceMatchRegionP08669996 faldo:begin ?templateMotifSequenceMatchBeginP08669997 . ?templateMotifSequenceMatchBeginP08669997 faldo:position ?templateMotifSequenceMatchBeginPositionP08669992 ; faldo:reference isoform:P08669-1 . ?templateMotifSequenceProfileAlignmentOperationP08669998 edam:has_input signature:MF_04084 ; rdf:type edam:operation_0300 . ?targetMotifMatch999 faldo:location ?targetMotifMatchRegionMatch1000 ; edam:is_output_of ?targetMotifSequenceAlignmentOperationMF_040841002 ; rdf:type edam:data_0869 ; rdf:value ?targetMotifMatchCigarP08669MF_04084993 . ?targetMotifMatchRegionMatch1000 faldo:begin ?targetMotifMatchRegionMatchBeginMF_040841001 . ?targetMotifMatchRegionMatchBeginMF_040841001 faldo:position ?targetMotifMatchRegionMatchBeginPositionMF_04084994 ; faldo:reference ?thisSequence . ?targetMotifSequenceAlignmentOperationMF_040841002 edam:has_input signature:MF_04084 ; rdf:type edam:operation_0300 . BIND(STRLEN(REPLACE(SUBSTR(?templateMotifCigarP08669MF_04084991, 1, (STRLEN(?templateMotifCigarP08669MF_04084991) - STRLEN(REPLACE(?templateMotifCigarP08669MF_04084991, CONCAT('^(?:-*[^-]){', STR(((301 - ?templateMotifSequenceMatchBeginPositionP08669992) + 1)), '}'), '')))), '[a-z]', '')) AS ?step11003) . BIND((STRLEN(SUBSTR(?targetMotifMatchCigarP08669MF_04084993, 1, (STRLEN(?targetMotifMatchCigarP08669MF_04084993) - STRLEN(REPLACE(?targetMotifMatchCigarP08669MF_04084993, CONCAT('^(?:[a-z]*(?:[A-Z]|-)){', STR(?step11003), '}'), ''))))) - STRLEN(REPLACE(SUBSTR(?targetMotifMatchCigarP08669MF_04084993, 1, (STRLEN(?targetMotifMatchCigarP08669MF_04084993) - STRLEN(REPLACE(?targetMotifMatchCigarP08669MF_04084993, CONCAT('^(?:[a-z]*(?:[A-Z]|-)){', STR(?step11003), '}'), '')))), '[^-]', ''))) AS ?step21004) . BIND(((?step21004 + ?targetMotifMatchRegionMatchBeginPositionMF_04084994) - 1) AS ?thisPositionOn305) . BIND(STRLEN(REPLACE(SUBSTR(?templateMotifCigarP08669MF_04084991, 1, (STRLEN(?templateMotifCigarP08669MF_04084991) - STRLEN(REPLACE(?templateMotifCigarP08669MF_04084991, CONCAT('^(?:-*[^-]){', STR(((310 - ?templateMotifSequenceMatchBeginPositionP08669992) + 1)), '}'), '')))), '[a-z]', '')) AS ?step11005) . BIND((STRLEN(SUBSTR(?targetMotifMatchCigarP08669MF_04084993, 1, (STRLEN(?targetMotifMatchCigarP08669MF_04084993) - STRLEN(REPLACE(?targetMotifMatchCigarP08669MF_04084993, CONCAT('^(?:[a-z]*(?:[A-Z]|-)){', STR(?step11005), '}'), ''))))) - STRLEN(REPLACE(SUBSTR(?targetMotifMatchCigarP08669MF_04084993, 1, (STRLEN(?targetMotifMatchCigarP08669MF_04084993) - STRLEN(REPLACE(?targetMotifMatchCigarP08669MF_04084993, CONCAT('^(?:[a-z]*(?:[A-Z]|-)){', STR(?step11005), '}'), '')))), '[^-]', ''))) AS ?step21006) . BIND(((?step21006 + ?targetMotifMatchRegionMatchBeginPositionMF_04084994) - 1) AS ?thisPositionOn306) . BIND(?this AS ?pfs3t1007) . BIND(URI(CONCAT(STR(?thisSequence), '#position', STR(?thisPositionOn305))) AS ?pfsb303) . BIND(URI(CONCAT(STR(?thisSequence), '#position', STR(?thisPositionOn306))) AS ?pfse304) . FILTER (REGEX('C[ARNDCQEGHILKMFPSTWYVBZJUOX]*C', SUBSTR(?thisSequenceValue, ?thisPositionOn305, (?thisPositionOn306 - ?thisPositionOn305)))) . BIND(URI(CONCAT(STR(?this), '#MF_04084a302')) AS ?annotation302) . BIND(?this AS ?pfs301) . } OPTIONAL { ?this up:sequence ?thisSequence . ?thisSequence rdf:value ?thisSequenceValue . ?templateMotifMatch1012 faldo:location ?templateMotifSequenceMatchRegionP086691013 ; edam:is_output_of ?templateMotifSequenceProfileAlignmentOperationP086691015 ; rdf:type edam:data_0869 ; rdf:value ?templateMotifCigarP08669MF_040841008 . ?templateMotifSequenceMatchRegionP086691013 faldo:begin ?templateMotifSequenceMatchBeginP086691014 . ?templateMotifSequenceMatchBeginP086691014 faldo:position ?templateMotifSequenceMatchBeginPositionP086691009 ; faldo:reference isoform:P08669-1 . ?templateMotifSequenceProfileAlignmentOperationP086691015 edam:has_input signature:MF_04084 ; rdf:type edam:operation_0300 . ?targetMotifMatch1016 faldo:location ?targetMotifMatchRegionMatch1017 ; edam:is_output_of ?targetMotifSequenceAlignmentOperationMF_040841019 ; rdf:type edam:data_0869 ; rdf:value ?targetMotifMatchCigarP08669MF_040841010 . ?targetMotifMatchRegionMatch1017 faldo:begin ?targetMotifMatchRegionMatchBeginMF_040841018 . ?targetMotifMatchRegionMatchBeginMF_040841018 faldo:position ?targetMotifMatchRegionMatchBeginPositionMF_040841011 ; faldo:reference ?thisSequence . ?targetMotifSequenceAlignmentOperationMF_040841019 edam:has_input signature:MF_04084 ; rdf:type edam:operation_0300 . BIND(STRLEN(REPLACE(SUBSTR(?templateMotifCigarP08669MF_040841008, 1, (STRLEN(?templateMotifCigarP08669MF_040841008) - STRLEN(REPLACE(?templateMotifCigarP08669MF_040841008, CONCAT('^(?:-*[^-]){', STR(((364 - ?templateMotifSequenceMatchBeginPositionP086691009) + 1)), '}'), '')))), '[a-z]', '')) AS ?step11020) . BIND((STRLEN(SUBSTR(?targetMotifMatchCigarP08669MF_040841010, 1, (STRLEN(?targetMotifMatchCigarP08669MF_040841010) - STRLEN(REPLACE(?targetMotifMatchCigarP08669MF_040841010, CONCAT('^(?:[a-z]*(?:[A-Z]|-)){', STR(?step11020), '}'), ''))))) - STRLEN(REPLACE(SUBSTR(?targetMotifMatchCigarP08669MF_040841010, 1, (STRLEN(?targetMotifMatchCigarP08669MF_040841010) - STRLEN(REPLACE(?targetMotifMatchCigarP08669MF_040841010, CONCAT('^(?:[a-z]*(?:[A-Z]|-)){', STR(?step11020), '}'), '')))), '[^-]', ''))) AS ?step21021) . BIND(((?step21021 + ?targetMotifMatchRegionMatchBeginPositionMF_040841011) - 1) AS ?thisPositionOn311) . BIND(STRLEN(REPLACE(SUBSTR(?templateMotifCigarP08669MF_040841008, 1, (STRLEN(?templateMotifCigarP08669MF_040841008) - STRLEN(REPLACE(?templateMotifCigarP08669MF_040841008, CONCAT('^(?:-*[^-]){', STR(((385 - ?templateMotifSequenceMatchBeginPositionP086691009) + 1)), '}'), '')))), '[a-z]', '')) AS ?step11022) . BIND((STRLEN(SUBSTR(?targetMotifMatchCigarP08669MF_040841010, 1, (STRLEN(?targetMotifMatchCigarP08669MF_040841010) - STRLEN(REPLACE(?targetMotifMatchCigarP08669MF_040841010, CONCAT('^(?:[a-z]*(?:[A-Z]|-)){', STR(?step11022), '}'), ''))))) - STRLEN(REPLACE(SUBSTR(?targetMotifMatchCigarP08669MF_040841010, 1, (STRLEN(?targetMotifMatchCigarP08669MF_040841010) - STRLEN(REPLACE(?targetMotifMatchCigarP08669MF_040841010, CONCAT('^(?:[a-z]*(?:[A-Z]|-)){', STR(?step11022), '}'), '')))), '[^-]', ''))) AS ?step21023) . BIND(((?step21023 + ?targetMotifMatchRegionMatchBeginPositionMF_040841011) - 1) AS ?thisPositionOn312) . BIND(?this AS ?pfs3t1024) . BIND(URI(CONCAT(STR(?thisSequence), '#position', STR(?thisPositionOn311))) AS ?pfsb309) . BIND(URI(CONCAT(STR(?thisSequence), '#position', STR(?thisPositionOn312))) AS ?pfse310) . FILTER (REGEX('C[ARNDCQEGHILKMFPSTWYVBZJUOX]*C', SUBSTR(?thisSequenceValue, ?thisPositionOn311, (?thisPositionOn312 - ?thisPositionOn311)))) . BIND(URI(CONCAT(STR(?this), '#MF_04084a308')) AS ?annotation308) . BIND(?this AS ?pfs307) . } OPTIONAL { ?this up:sequence ?thisSequence . ?thisSequence rdf:value ?thisSequenceValue . ?templateMotifMatch1031 faldo:location ?templateMotifSequenceMatchRegionP086691032 ; edam:is_output_of ?templateMotifSequenceProfileAlignmentOperationP086691034 ; rdf:type edam:data_0869 ; rdf:value ?templateMotifCigarP08669MF_040841027 . ?templateMotifSequenceMatchRegionP086691032 faldo:begin ?templateMotifSequenceMatchBeginP086691033 . ?templateMotifSequenceMatchBeginP086691033 faldo:position ?templateMotifSequenceMatchBeginPositionP086691028 ; faldo:reference isoform:P08669-1 . ?templateMotifSequenceProfileAlignmentOperationP086691034 edam:has_input signature:MF_04084 ; rdf:type edam:operation_0300 . ?targetMotifMatch1035 faldo:location ?targetMotifMatchRegionMatch1036 ; edam:is_output_of ?targetMotifSequenceAlignmentOperationMF_040841038 ; rdf:type edam:data_0869 ; rdf:value ?targetMotifMatchCigarP08669MF_040841029 . ?targetMotifMatchRegionMatch1036 faldo:begin ?targetMotifMatchRegionMatchBeginMF_040841037 . ?targetMotifMatchRegionMatchBeginMF_040841037 faldo:position ?targetMotifMatchRegionMatchBeginPositionMF_040841030 ; faldo:reference ?thisSequence . ?targetMotifSequenceAlignmentOperationMF_040841038 edam:has_input signature:MF_04084 ; rdf:type edam:operation_0300 . ?this up:organism ?thisOrganism . ?thisOrganism up:scientificName ?name1025 . FILTER (CONTAINS(?containsName1026, ?name1025)) . BIND(STRLEN(REPLACE(SUBSTR(?templateMotifCigarP08669MF_040841027, 1, (STRLEN(?templateMotifCigarP08669MF_040841027) - STRLEN(REPLACE(?templateMotifCigarP08669MF_040841027, CONCAT('^(?:-*[^-]){', STR(((188 - ?templateMotifSequenceMatchBeginPositionP086691028) + 1)), '}'), '')))), '[a-z]', '')) AS ?step11039) . BIND((STRLEN(SUBSTR(?targetMotifMatchCigarP08669MF_040841029, 1, (STRLEN(?targetMotifMatchCigarP08669MF_040841029) - STRLEN(REPLACE(?targetMotifMatchCigarP08669MF_040841029, CONCAT('^(?:[a-z]*(?:[A-Z]|-)){', STR(?step11039), '}'), ''))))) - STRLEN(REPLACE(SUBSTR(?targetMotifMatchCigarP08669MF_040841029, 1, (STRLEN(?targetMotifMatchCigarP08669MF_040841029) - STRLEN(REPLACE(?targetMotifMatchCigarP08669MF_040841029, CONCAT('^(?:[a-z]*(?:[A-Z]|-)){', STR(?step11039), '}'), '')))), '[^-]', ''))) AS ?step21040) . BIND(((?step21040 + ?targetMotifMatchRegionMatchBeginPositionMF_040841030) - 1) AS ?thisPositionOn317) . BIND(STRLEN(REPLACE(SUBSTR(?templateMotifCigarP08669MF_040841027, 1, (STRLEN(?templateMotifCigarP08669MF_040841027) - STRLEN(REPLACE(?templateMotifCigarP08669MF_040841027, CONCAT('^(?:-*[^-]){', STR(((216 - ?templateMotifSequenceMatchBeginPositionP086691028) + 1)), '}'), '')))), '[a-z]', '')) AS ?step11041) . BIND((STRLEN(SUBSTR(?targetMotifMatchCigarP08669MF_040841029, 1, (STRLEN(?targetMotifMatchCigarP08669MF_040841029) - STRLEN(REPLACE(?targetMotifMatchCigarP08669MF_040841029, CONCAT('^(?:[a-z]*(?:[A-Z]|-)){', STR(?step11041), '}'), ''))))) - STRLEN(REPLACE(SUBSTR(?targetMotifMatchCigarP08669MF_040841029, 1, (STRLEN(?targetMotifMatchCigarP08669MF_040841029) - STRLEN(REPLACE(?targetMotifMatchCigarP08669MF_040841029, CONCAT('^(?:[a-z]*(?:[A-Z]|-)){', STR(?step11041), '}'), '')))), '[^-]', ''))) AS ?step21042) . BIND(((?step21042 + ?targetMotifMatchRegionMatchBeginPositionMF_040841030) - 1) AS ?thisPositionOn318) . BIND(?this AS ?pfs4t1043) . BIND(URI(CONCAT(STR(?thisSequence), '#position', STR(?thisPositionOn317))) AS ?pfsb315) . BIND(URI(CONCAT(STR(?thisSequence), '#position', STR(?thisPositionOn318))) AS ?pfse316) . FILTER ((BOUND(?thisPositionOn317) && BOUND(?thisPositionOn318))) . BIND(URI(CONCAT(STR(?this), '#MF_04084a314')) AS ?annotation314) . BIND(?this AS ?pfs313) . } OPTIONAL { ?this a up:Protein . ?this up:organism ?thisOrganism . ?thisOrganism up:scientificName ?name1044 . FILTER (CONTAINS(?containsName1045, ?name1044)) . BIND(?this AS ?case28) . } OPTIONAL { ?this a up:Protein . ?this up:organism ?thisOrganism . ?thisOrganism up:scientificName ?name1046 . FILTER (! (CONTAINS(?containsName1047, ?name1046))) . BIND(?this AS ?case29) . } OPTIONAL { ?this a up:Protein . ?this up:organism ?thisOrganism . ?thisOrganism up:scientificName ?name1048 . FILTER (CONTAINS(?containsName1049, ?name1048)) . BIND(?this AS ?caseWithTag1050) . } BIND(IF(BOUND(?tagFTGRP_1), ?caseWithTag1050, ?UNBOUND_VARIABLE) AS ?case30) . }