@prefix rdf: . @prefix rdfs: . @prefix rdf4j: . @prefix sesame: . @prefix owl: . @prefix xsd: . @prefix fn: . a , ; , , , , , , , , , , , , , , , , , , , , , , , , , , , , , , , , , , , , , , , , , , , , , , , , , , , , , , , , , , , , , , , , , , , , , , , , , , , , , , , , , , , , , , , , , , , , , , , , , , , , , , , , , , , , , , , , , , , , , , , , , , , , , , , , , , , , , ; ; ; ; """CONSTRUCT { _:261258 up:source unirule:MF_00704 . _:261259 up:source unirule:MF_00704 . _:261260 up:source unirule:MF_00704 . _:261261 up:source unirule:MF_00704 . _:261262 up:source unirule:MF_00704 . _:261263 up:source unirule:MF_00704 . _:261264 up:source unirule:MF_00704 . _:261265 up:source unirule:MF_00704 . _:261266 up:source unirule:MF_00704 . _:261267 up:source unirule:MF_00704 . _:261268 up:source unirule:MF_00704 . _:261269 up:source unirule:MF_00704 . _:261270 up:source unirule:MF_00704 . _:261271 up:source unirule:MF_00704 . _:261272 up:source unirule:MF_00704 . _:261273 up:source unirule:MF_00704 . ?this up:annotation ?annotation1 , ?annotation3 , ?annotation4 ; up:classifiedWith GO:0019807 , keyword:378 ; up:recommendedName ?name0 . ?name0 up:ecName '3.5.1.15' ; up:fullName 'Probable aspartoacylase' ; rdf:type up:Structured_Name . ?annotation1 up:activity ?activity2 ; rdf:type up:Catalytic_Activity_Annotation . ?activity2 up:catalyticActivity ; up:enzymeClass . ?annotation3 up:cofactor chebi:29105 ; rdf:type up:Cofactor_Annotation ; rdfs:comment 'Binds 1 zinc ion per subunit.' . ?annotation4 a up:Similarity_Annotation ; rdfs:comment 'Belongs to the AspA/AstE family. Aspartoacylase subfamily.' . ?case5 up:classifiedWith GO:0008270 , keyword:479 , keyword:862 . ?pfs6 up:annotation ?annotation7 , ?annotation13 , ?annotation19 . ?annotation7 faldo:begin ?pfsb8 ; faldo:end ?pfse9 ; up:ligand ?ligand10 ; rdf:type up:Binding_Site_Annotation . ?pfsb8 faldo:position ?thisPositionOn11 ; rdf:type faldo:ExactPosition . ?pfse9 faldo:position ?thisPositionOn12 ; rdf:type faldo:ExactPosition . ?ligand10 rdfs:subClassOf chebi:29105 . ?annotation13 faldo:begin ?pfsb14 ; faldo:end ?pfse15 ; up:ligand ?ligand16 ; rdf:type up:Binding_Site_Annotation . ?pfsb14 faldo:position ?thisPositionOn17 ; rdf:type faldo:ExactPosition . ?pfse15 faldo:position ?thisPositionOn18 ; rdf:type faldo:ExactPosition . ?ligand16 rdfs:subClassOf chebi:29105 . ?annotation19 faldo:begin ?pfsb20 ; faldo:end ?pfse21 ; up:ligand ?ligand22 ; rdf:type up:Binding_Site_Annotation . ?pfsb20 faldo:position ?thisPositionOn23 ; rdf:type faldo:ExactPosition . ?pfse21 faldo:position ?thisPositionOn24 ; rdf:type faldo:ExactPosition . ?ligand22 rdfs:subClassOf chebi:29105 . ?pfs25 up:annotation ?annotation26 . ?annotation26 faldo:begin ?pfsb27 ; faldo:end ?pfse28 ; up:ligand ?ligand29 ; rdf:type up:Binding_Site_Annotation . ?pfsb27 faldo:position ?thisPositionOn31 ; rdf:type faldo:ExactPosition . ?pfse28 faldo:position ?thisPositionOn32 ; rdf:type faldo:ExactPosition . ?ligand29 rdfs:subClassOf ?molecule30 . ?molecule30 rdfs:label 'substrate' . ?pfs33 up:annotation ?annotation34 . ?annotation34 faldo:begin ?pfsb35 ; faldo:end ?pfse36 ; up:ligand ?ligand37 ; rdf:type up:Binding_Site_Annotation . ?pfsb35 faldo:position ?thisPositionOn39 ; rdf:type faldo:ExactPosition . ?pfse36 faldo:position ?thisPositionOn40 ; rdf:type faldo:ExactPosition . ?ligand37 rdfs:subClassOf ?molecule38 . ?molecule38 rdfs:label 'substrate' . ?pfs41 up:annotation ?annotation42 . ?annotation42 faldo:begin ?pfsb43 ; faldo:end ?pfse44 ; up:ligand ?ligand45 ; rdf:type up:Binding_Site_Annotation . ?pfsb43 faldo:position ?thisPositionOn47 ; rdf:type faldo:ExactPosition . ?pfse44 faldo:position ?thisPositionOn48 ; rdf:type faldo:ExactPosition . ?ligand45 rdfs:subClassOf ?molecule46 . ?molecule46 rdfs:label 'substrate' . ?pfs49 up:annotation ?annotation50 . ?annotation50 faldo:begin ?pfsb51 ; faldo:end ?pfse52 ; up:ligand ?ligand53 ; rdf:type up:Binding_Site_Annotation . ?pfsb51 faldo:position ?thisPositionOn55 ; rdf:type faldo:ExactPosition . ?pfse52 faldo:position ?thisPositionOn56 ; rdf:type faldo:ExactPosition . ?ligand53 rdfs:subClassOf ?molecule54 . ?molecule54 rdfs:label 'substrate' . _:261274 a rdf:Statement ; up:attribution _:261258 ; rdf:subject ?this ; rdf:predicate up:recommendedName ; rdf:object ?name0 . _:261275 a rdf:Statement ; up:attribution _:261259 ; rdf:subject ?this ; rdf:predicate up:annotation ; rdf:object ?annotation1 . _:261276 a rdf:Statement ; up:attribution _:261260 ; rdf:subject ?this ; rdf:predicate up:annotation ; rdf:object ?annotation3 . _:261277 a rdf:Statement ; up:attribution _:261261 ; rdf:subject ?this ; rdf:predicate up:annotation ; rdf:object ?annotation4 . _:261278 a rdf:Statement ; up:attribution _:261262 ; rdf:subject ?this ; rdf:predicate up:classifiedWith ; rdf:object keyword:378 . _:261279 a rdf:Statement ; up:attribution _:261263 ; rdf:subject ?this ; rdf:predicate up:classifiedWith ; rdf:object GO:0019807 . _:261280 a rdf:Statement ; up:attribution _:261264 ; rdf:subject ?case5 ; rdf:predicate up:classifiedWith ; rdf:object keyword:479 . _:261281 a rdf:Statement ; up:attribution _:261265 ; rdf:subject ?case5 ; rdf:predicate up:classifiedWith ; rdf:object keyword:862 . _:261282 a rdf:Statement ; up:attribution _:261266 ; rdf:subject ?case5 ; rdf:predicate up:classifiedWith ; rdf:object GO:0008270 . _:261283 a rdf:Statement ; up:source unirule:MF_00704 ; rdf:subject ?pfs6 ; rdf:predicate up:annotation ; rdf:object ?annotation7 . _:261284 a rdf:Statement ; up:attribution _:261267 ; rdf:subject ?pfs6 ; rdf:predicate up:annotation ; rdf:object ?annotation7 . _:261285 a rdf:Statement ; up:source unirule:MF_00704 ; rdf:subject ?pfs6 ; rdf:predicate up:annotation ; rdf:object ?annotation13 . _:261286 a rdf:Statement ; up:attribution _:261268 ; rdf:subject ?pfs6 ; rdf:predicate up:annotation ; rdf:object ?annotation13 . _:261287 a rdf:Statement ; up:source unirule:MF_00704 ; rdf:subject ?pfs6 ; rdf:predicate up:annotation ; rdf:object ?annotation19 . _:261288 a rdf:Statement ; up:attribution _:261269 ; rdf:subject ?pfs6 ; rdf:predicate up:annotation ; rdf:object ?annotation19 . _:261289 a rdf:Statement ; up:source unirule:MF_00704 ; rdf:subject ?pfs25 ; rdf:predicate up:annotation ; rdf:object ?annotation26 . _:261290 a rdf:Statement ; up:attribution _:261270 ; rdf:subject ?pfs25 ; rdf:predicate up:annotation ; rdf:object ?annotation26 . _:261291 a rdf:Statement ; up:source unirule:MF_00704 ; rdf:subject ?pfs33 ; rdf:predicate up:annotation ; rdf:object ?annotation34 . _:261292 a rdf:Statement ; up:attribution _:261271 ; rdf:subject ?pfs33 ; rdf:predicate up:annotation ; rdf:object ?annotation34 . _:261293 a rdf:Statement ; up:source unirule:MF_00704 ; rdf:subject ?pfs41 ; rdf:predicate up:annotation ; rdf:object ?annotation42 . _:261294 a rdf:Statement ; up:attribution _:261272 ; rdf:subject ?pfs41 ; rdf:predicate up:annotation ; rdf:object ?annotation42 . _:261295 a rdf:Statement ; up:source unirule:MF_00704 ; rdf:subject ?pfs49 ; rdf:predicate up:annotation ; rdf:object ?annotation50 . _:261296 a rdf:Statement ; up:attribution _:261273 ; rdf:subject ?pfs49 ; rdf:predicate up:annotation ; rdf:object ?annotation50 . } WHERE { #baseURI: http://purl.uniprot.org/unirule/MF_00704 #Rule MF_00704 Created by:? on:2005-02-28 Modified by:Edouard de Castro on:2024-09-02 ?this up:organism ?thisOrganism ; rdfs:seeAlso signature:MF_00704 . ?thisOrganism rdfs:subClassOf+ taxon:1117 . BIND(URI(CONCAT(STR(?this), '#MF_00704a0')) AS ?name0) . BIND(URI(CONCAT(STR(?this), '#MF_00704a1')) AS ?annotation1) . BIND(URI(CONCAT(STR(?this), '#MF_00704a3')) AS ?annotation3) . BIND(URI(CONCAT(STR(?this), '#MF_00704a4')) AS ?annotation4) . OPTIONAL { ?this up:sequence ?thisSequence . ?thisSequence rdf:value ?thisSequenceValue . ?templateMotifMatch61 faldo:location ?templateMotifSequenceMatchRegionQ8YQC162 ; edam:is_output_of ?templateMotifSequenceProfileAlignmentOperationQ8YQC164 ; rdf:type edam:data_0869 ; rdf:value ?templateMotifCigarQ8YQC1MF_0070457 . ?templateMotifSequenceMatchRegionQ8YQC162 faldo:begin ?templateMotifSequenceMatchBeginQ8YQC163 . ?templateMotifSequenceMatchBeginQ8YQC163 faldo:position ?templateMotifSequenceMatchBeginPositionQ8YQC158 ; faldo:reference isoform:Q8YQC1-1 . ?templateMotifSequenceProfileAlignmentOperationQ8YQC164 edam:has_input signature:MF_00704 ; rdf:type edam:operation_0300 . ?targetMotifMatch65 faldo:location ?targetMotifMatchRegionMatch66 ; edam:is_output_of ?targetMotifSequenceAlignmentOperationMF_0070468 ; rdf:type edam:data_0869 ; rdf:value ?targetMotifMatchCigarQ8YQC1MF_0070459 . ?targetMotifMatchRegionMatch66 faldo:begin ?targetMotifMatchRegionMatchBeginMF_0070467 . ?targetMotifMatchRegionMatchBeginMF_0070467 faldo:position ?targetMotifMatchRegionMatchBeginPositionMF_0070460 ; faldo:reference ?thisSequence . ?targetMotifSequenceAlignmentOperationMF_0070468 edam:has_input signature:MF_00704 ; rdf:type edam:operation_0300 . BIND(?this AS ?tagFTGRP_1) . BIND(STRLEN(REPLACE(SUBSTR(?templateMotifCigarQ8YQC1MF_0070457, 1, (STRLEN(?templateMotifCigarQ8YQC1MF_0070457) - STRLEN(REPLACE(?templateMotifCigarQ8YQC1MF_0070457, CONCAT('^(?:-*[^-]){', STR(((14 - ?templateMotifSequenceMatchBeginPositionQ8YQC158) + 1)), '}'), '')))), '[a-z]', '')) AS ?step169) . BIND((STRLEN(SUBSTR(?targetMotifMatchCigarQ8YQC1MF_0070459, 1, (STRLEN(?targetMotifMatchCigarQ8YQC1MF_0070459) - STRLEN(REPLACE(?targetMotifMatchCigarQ8YQC1MF_0070459, CONCAT('^(?:[a-z]*(?:[A-Z]|-)){', STR(?step169), '}'), ''))))) - STRLEN(REPLACE(SUBSTR(?targetMotifMatchCigarQ8YQC1MF_0070459, 1, (STRLEN(?targetMotifMatchCigarQ8YQC1MF_0070459) - STRLEN(REPLACE(?targetMotifMatchCigarQ8YQC1MF_0070459, CONCAT('^(?:[a-z]*(?:[A-Z]|-)){', STR(?step169), '}'), '')))), '[^-]', ''))) AS ?step270) . BIND(((?step270 + ?targetMotifMatchRegionMatchBeginPositionMF_0070460) - 1) AS ?thisPositionOn11) . BIND(?thisPositionOn11 AS ?thisPositionOn12) . BIND(?this AS ?pfs1t71) . BIND(URI(CONCAT(STR(?thisSequence), '#position', STR(?thisPositionOn11))) AS ?pfsb8) . BIND(URI(CONCAT(STR(?thisSequence), '#position', STR(?thisPositionOn12))) AS ?pfse9) . FILTER ((SUBSTR(?thisSequenceValue, ?thisPositionOn11, 1) = 'H')) . BIND(STRLEN(REPLACE(SUBSTR(?templateMotifCigarQ8YQC1MF_0070457, 1, (STRLEN(?templateMotifCigarQ8YQC1MF_0070457) - STRLEN(REPLACE(?templateMotifCigarQ8YQC1MF_0070457, CONCAT('^(?:-*[^-]){', STR(((17 - ?templateMotifSequenceMatchBeginPositionQ8YQC158) + 1)), '}'), '')))), '[a-z]', '')) AS ?step172) . BIND((STRLEN(SUBSTR(?targetMotifMatchCigarQ8YQC1MF_0070459, 1, (STRLEN(?targetMotifMatchCigarQ8YQC1MF_0070459) - STRLEN(REPLACE(?targetMotifMatchCigarQ8YQC1MF_0070459, CONCAT('^(?:[a-z]*(?:[A-Z]|-)){', STR(?step172), '}'), ''))))) - STRLEN(REPLACE(SUBSTR(?targetMotifMatchCigarQ8YQC1MF_0070459, 1, (STRLEN(?targetMotifMatchCigarQ8YQC1MF_0070459) - STRLEN(REPLACE(?targetMotifMatchCigarQ8YQC1MF_0070459, CONCAT('^(?:[a-z]*(?:[A-Z]|-)){', STR(?step172), '}'), '')))), '[^-]', ''))) AS ?step273) . BIND(((?step273 + ?targetMotifMatchRegionMatchBeginPositionMF_0070460) - 1) AS ?thisPositionOn17) . BIND(?thisPositionOn17 AS ?thisPositionOn18) . BIND(?this AS ?pfs1t74) . BIND(URI(CONCAT(STR(?thisSequence), '#position', STR(?thisPositionOn17))) AS ?pfsb14) . BIND(URI(CONCAT(STR(?thisSequence), '#position', STR(?thisPositionOn18))) AS ?pfse15) . FILTER ((SUBSTR(?thisSequenceValue, ?thisPositionOn17, 1) = 'E')) . BIND(STRLEN(REPLACE(SUBSTR(?templateMotifCigarQ8YQC1MF_0070457, 1, (STRLEN(?templateMotifCigarQ8YQC1MF_0070457) - STRLEN(REPLACE(?templateMotifCigarQ8YQC1MF_0070457, CONCAT('^(?:-*[^-]){', STR(((106 - ?templateMotifSequenceMatchBeginPositionQ8YQC158) + 1)), '}'), '')))), '[a-z]', '')) AS ?step175) . BIND((STRLEN(SUBSTR(?targetMotifMatchCigarQ8YQC1MF_0070459, 1, (STRLEN(?targetMotifMatchCigarQ8YQC1MF_0070459) - STRLEN(REPLACE(?targetMotifMatchCigarQ8YQC1MF_0070459, CONCAT('^(?:[a-z]*(?:[A-Z]|-)){', STR(?step175), '}'), ''))))) - STRLEN(REPLACE(SUBSTR(?targetMotifMatchCigarQ8YQC1MF_0070459, 1, (STRLEN(?targetMotifMatchCigarQ8YQC1MF_0070459) - STRLEN(REPLACE(?targetMotifMatchCigarQ8YQC1MF_0070459, CONCAT('^(?:[a-z]*(?:[A-Z]|-)){', STR(?step175), '}'), '')))), '[^-]', ''))) AS ?step276) . BIND(((?step276 + ?targetMotifMatchRegionMatchBeginPositionMF_0070460) - 1) AS ?thisPositionOn23) . BIND(?thisPositionOn23 AS ?thisPositionOn24) . BIND(?this AS ?pfs1t77) . BIND(URI(CONCAT(STR(?thisSequence), '#position', STR(?thisPositionOn23))) AS ?pfsb20) . BIND(URI(CONCAT(STR(?thisSequence), '#position', STR(?thisPositionOn24))) AS ?pfse21) . FILTER ((SUBSTR(?thisSequenceValue, ?thisPositionOn23, 1) = 'H')) . BIND(?this AS ?pfs6) . } OPTIONAL { ?this up:sequence ?thisSequence . ?thisSequence rdf:value ?thisSequenceValue . ?templateMotifMatch82 faldo:location ?templateMotifSequenceMatchRegionQ8YQC183 ; edam:is_output_of ?templateMotifSequenceProfileAlignmentOperationQ8YQC185 ; rdf:type edam:data_0869 ; rdf:value ?templateMotifCigarQ8YQC1MF_0070478 . ?templateMotifSequenceMatchRegionQ8YQC183 faldo:begin ?templateMotifSequenceMatchBeginQ8YQC184 . ?templateMotifSequenceMatchBeginQ8YQC184 faldo:position ?templateMotifSequenceMatchBeginPositionQ8YQC179 ; faldo:reference isoform:Q8YQC1-1 . ?templateMotifSequenceProfileAlignmentOperationQ8YQC185 edam:has_input signature:MF_00704 ; rdf:type edam:operation_0300 . ?targetMotifMatch86 faldo:location ?targetMotifMatchRegionMatch87 ; edam:is_output_of ?targetMotifSequenceAlignmentOperationMF_0070489 ; rdf:type edam:data_0869 ; rdf:value ?targetMotifMatchCigarQ8YQC1MF_0070480 . ?targetMotifMatchRegionMatch87 faldo:begin ?targetMotifMatchRegionMatchBeginMF_0070488 . ?targetMotifMatchRegionMatchBeginMF_0070488 faldo:position ?targetMotifMatchRegionMatchBeginPositionMF_0070481 ; faldo:reference ?thisSequence . ?targetMotifSequenceAlignmentOperationMF_0070489 edam:has_input signature:MF_00704 ; rdf:type edam:operation_0300 . BIND(STRLEN(REPLACE(SUBSTR(?templateMotifCigarQ8YQC1MF_0070478, 1, (STRLEN(?templateMotifCigarQ8YQC1MF_0070478) - STRLEN(REPLACE(?templateMotifCigarQ8YQC1MF_0070478, CONCAT('^(?:-*[^-]){', STR(((63 - ?templateMotifSequenceMatchBeginPositionQ8YQC179) + 1)), '}'), '')))), '[a-z]', '')) AS ?step190) . BIND((STRLEN(SUBSTR(?targetMotifMatchCigarQ8YQC1MF_0070480, 1, (STRLEN(?targetMotifMatchCigarQ8YQC1MF_0070480) - STRLEN(REPLACE(?targetMotifMatchCigarQ8YQC1MF_0070480, CONCAT('^(?:[a-z]*(?:[A-Z]|-)){', STR(?step190), '}'), ''))))) - STRLEN(REPLACE(SUBSTR(?targetMotifMatchCigarQ8YQC1MF_0070480, 1, (STRLEN(?targetMotifMatchCigarQ8YQC1MF_0070480) - STRLEN(REPLACE(?targetMotifMatchCigarQ8YQC1MF_0070480, CONCAT('^(?:[a-z]*(?:[A-Z]|-)){', STR(?step190), '}'), '')))), '[^-]', ''))) AS ?step291) . BIND(((?step291 + ?targetMotifMatchRegionMatchBeginPositionMF_0070481) - 1) AS ?thisPositionOn31) . BIND(STRLEN(REPLACE(SUBSTR(?templateMotifCigarQ8YQC1MF_0070478, 1, (STRLEN(?templateMotifCigarQ8YQC1MF_0070478) - STRLEN(REPLACE(?templateMotifCigarQ8YQC1MF_0070478, CONCAT('^(?:-*[^-]){', STR(((64 - ?templateMotifSequenceMatchBeginPositionQ8YQC179) + 1)), '}'), '')))), '[a-z]', '')) AS ?step192) . BIND((STRLEN(SUBSTR(?targetMotifMatchCigarQ8YQC1MF_0070480, 1, (STRLEN(?targetMotifMatchCigarQ8YQC1MF_0070480) - STRLEN(REPLACE(?targetMotifMatchCigarQ8YQC1MF_0070480, CONCAT('^(?:[a-z]*(?:[A-Z]|-)){', STR(?step192), '}'), ''))))) - STRLEN(REPLACE(SUBSTR(?targetMotifMatchCigarQ8YQC1MF_0070480, 1, (STRLEN(?targetMotifMatchCigarQ8YQC1MF_0070480) - STRLEN(REPLACE(?targetMotifMatchCigarQ8YQC1MF_0070480, CONCAT('^(?:[a-z]*(?:[A-Z]|-)){', STR(?step192), '}'), '')))), '[^-]', ''))) AS ?step293) . BIND(((?step293 + ?targetMotifMatchRegionMatchBeginPositionMF_0070481) - 1) AS ?thisPositionOn32) . BIND(?this AS ?pfs2t94) . BIND(URI(CONCAT(STR(?thisSequence), '#position', STR(?thisPositionOn31))) AS ?pfsb27) . BIND(URI(CONCAT(STR(?thisSequence), '#position', STR(?thisPositionOn32))) AS ?pfse28) . FILTER ((SUBSTR(?thisSequenceValue, ?thisPositionOn31, (?thisPositionOn32 - ?thisPositionOn31)) = 'NR')) . BIND(URI(CONCAT(STR(?this), '#MF_00704a26')) AS ?annotation26) . BIND(?this AS ?pfs25) . } OPTIONAL { ?this up:sequence ?thisSequence . ?thisSequence rdf:value ?thisSequenceValue . ?templateMotifMatch99 faldo:location ?templateMotifSequenceMatchRegionQ8YQC1100 ; edam:is_output_of ?templateMotifSequenceProfileAlignmentOperationQ8YQC1102 ; rdf:type edam:data_0869 ; rdf:value ?templateMotifCigarQ8YQC1MF_0070495 . ?templateMotifSequenceMatchRegionQ8YQC1100 faldo:begin ?templateMotifSequenceMatchBeginQ8YQC1101 . ?templateMotifSequenceMatchBeginQ8YQC1101 faldo:position ?templateMotifSequenceMatchBeginPositionQ8YQC196 ; faldo:reference isoform:Q8YQC1-1 . ?templateMotifSequenceProfileAlignmentOperationQ8YQC1102 edam:has_input signature:MF_00704 ; rdf:type edam:operation_0300 . ?targetMotifMatch103 faldo:location ?targetMotifMatchRegionMatch104 ; edam:is_output_of ?targetMotifSequenceAlignmentOperationMF_00704106 ; rdf:type edam:data_0869 ; rdf:value ?targetMotifMatchCigarQ8YQC1MF_0070497 . ?targetMotifMatchRegionMatch104 faldo:begin ?targetMotifMatchRegionMatchBeginMF_00704105 . ?targetMotifMatchRegionMatchBeginMF_00704105 faldo:position ?targetMotifMatchRegionMatchBeginPositionMF_0070498 ; faldo:reference ?thisSequence . ?targetMotifSequenceAlignmentOperationMF_00704106 edam:has_input signature:MF_00704 ; rdf:type edam:operation_0300 . BIND(STRLEN(REPLACE(SUBSTR(?templateMotifCigarQ8YQC1MF_0070495, 1, (STRLEN(?templateMotifCigarQ8YQC1MF_0070495) - STRLEN(REPLACE(?templateMotifCigarQ8YQC1MF_0070495, CONCAT('^(?:-*[^-]){', STR(((56 - ?templateMotifSequenceMatchBeginPositionQ8YQC196) + 1)), '}'), '')))), '[a-z]', '')) AS ?step1107) . BIND((STRLEN(SUBSTR(?targetMotifMatchCigarQ8YQC1MF_0070497, 1, (STRLEN(?targetMotifMatchCigarQ8YQC1MF_0070497) - STRLEN(REPLACE(?targetMotifMatchCigarQ8YQC1MF_0070497, CONCAT('^(?:[a-z]*(?:[A-Z]|-)){', STR(?step1107), '}'), ''))))) - STRLEN(REPLACE(SUBSTR(?targetMotifMatchCigarQ8YQC1MF_0070497, 1, (STRLEN(?targetMotifMatchCigarQ8YQC1MF_0070497) - STRLEN(REPLACE(?targetMotifMatchCigarQ8YQC1MF_0070497, CONCAT('^(?:[a-z]*(?:[A-Z]|-)){', STR(?step1107), '}'), '')))), '[^-]', ''))) AS ?step2108) . BIND(((?step2108 + ?targetMotifMatchRegionMatchBeginPositionMF_0070498) - 1) AS ?thisPositionOn39) . BIND(?thisPositionOn39 AS ?thisPositionOn40) . BIND(?this AS ?pfs2t109) . BIND(URI(CONCAT(STR(?thisSequence), '#position', STR(?thisPositionOn39))) AS ?pfsb35) . BIND(URI(CONCAT(STR(?thisSequence), '#position', STR(?thisPositionOn40))) AS ?pfse36) . FILTER ((SUBSTR(?thisSequenceValue, ?thisPositionOn39, 1) = 'R')) . BIND(URI(CONCAT(STR(?this), '#MF_00704a34')) AS ?annotation34) . BIND(?this AS ?pfs33) . } OPTIONAL { ?this up:sequence ?thisSequence . ?thisSequence rdf:value ?thisSequenceValue . ?templateMotifMatch114 faldo:location ?templateMotifSequenceMatchRegionQ8YQC1115 ; edam:is_output_of ?templateMotifSequenceProfileAlignmentOperationQ8YQC1117 ; rdf:type edam:data_0869 ; rdf:value ?templateMotifCigarQ8YQC1MF_00704110 . ?templateMotifSequenceMatchRegionQ8YQC1115 faldo:begin ?templateMotifSequenceMatchBeginQ8YQC1116 . ?templateMotifSequenceMatchBeginQ8YQC1116 faldo:position ?templateMotifSequenceMatchBeginPositionQ8YQC1111 ; faldo:reference isoform:Q8YQC1-1 . ?templateMotifSequenceProfileAlignmentOperationQ8YQC1117 edam:has_input signature:MF_00704 ; rdf:type edam:operation_0300 . ?targetMotifMatch118 faldo:location ?targetMotifMatchRegionMatch119 ; edam:is_output_of ?targetMotifSequenceAlignmentOperationMF_00704121 ; rdf:type edam:data_0869 ; rdf:value ?targetMotifMatchCigarQ8YQC1MF_00704112 . ?targetMotifMatchRegionMatch119 faldo:begin ?targetMotifMatchRegionMatchBeginMF_00704120 . ?targetMotifMatchRegionMatchBeginMF_00704120 faldo:position ?targetMotifMatchRegionMatchBeginPositionMF_00704113 ; faldo:reference ?thisSequence . ?targetMotifSequenceAlignmentOperationMF_00704121 edam:has_input signature:MF_00704 ; rdf:type edam:operation_0300 . BIND(STRLEN(REPLACE(SUBSTR(?templateMotifCigarQ8YQC1MF_00704110, 1, (STRLEN(?templateMotifCigarQ8YQC1MF_00704110) - STRLEN(REPLACE(?templateMotifCigarQ8YQC1MF_00704110, CONCAT('^(?:-*[^-]){', STR(((164 - ?templateMotifSequenceMatchBeginPositionQ8YQC1111) + 1)), '}'), '')))), '[a-z]', '')) AS ?step1122) . BIND((STRLEN(SUBSTR(?targetMotifMatchCigarQ8YQC1MF_00704112, 1, (STRLEN(?targetMotifMatchCigarQ8YQC1MF_00704112) - STRLEN(REPLACE(?targetMotifMatchCigarQ8YQC1MF_00704112, CONCAT('^(?:[a-z]*(?:[A-Z]|-)){', STR(?step1122), '}'), ''))))) - STRLEN(REPLACE(SUBSTR(?targetMotifMatchCigarQ8YQC1MF_00704112, 1, (STRLEN(?targetMotifMatchCigarQ8YQC1MF_00704112) - STRLEN(REPLACE(?targetMotifMatchCigarQ8YQC1MF_00704112, CONCAT('^(?:[a-z]*(?:[A-Z]|-)){', STR(?step1122), '}'), '')))), '[^-]', ''))) AS ?step2123) . BIND(((?step2123 + ?targetMotifMatchRegionMatchBeginPositionMF_00704113) - 1) AS ?thisPositionOn47) . BIND(?thisPositionOn47 AS ?thisPositionOn48) . BIND(?this AS ?pfs2t124) . BIND(URI(CONCAT(STR(?thisSequence), '#position', STR(?thisPositionOn47))) AS ?pfsb43) . BIND(URI(CONCAT(STR(?thisSequence), '#position', STR(?thisPositionOn48))) AS ?pfse44) . FILTER ((SUBSTR(?thisSequenceValue, ?thisPositionOn47, 1) = 'E')) . BIND(URI(CONCAT(STR(?this), '#MF_00704a42')) AS ?annotation42) . BIND(?this AS ?pfs41) . } OPTIONAL { ?this up:sequence ?thisSequence . ?thisSequence rdf:value ?thisSequenceValue . ?templateMotifMatch129 faldo:location ?templateMotifSequenceMatchRegionQ8YQC1130 ; edam:is_output_of ?templateMotifSequenceProfileAlignmentOperationQ8YQC1132 ; rdf:type edam:data_0869 ; rdf:value ?templateMotifCigarQ8YQC1MF_00704125 . ?templateMotifSequenceMatchRegionQ8YQC1130 faldo:begin ?templateMotifSequenceMatchBeginQ8YQC1131 . ?templateMotifSequenceMatchBeginQ8YQC1131 faldo:position ?templateMotifSequenceMatchBeginPositionQ8YQC1126 ; faldo:reference isoform:Q8YQC1-1 . ?templateMotifSequenceProfileAlignmentOperationQ8YQC1132 edam:has_input signature:MF_00704 ; rdf:type edam:operation_0300 . ?targetMotifMatch133 faldo:location ?targetMotifMatchRegionMatch134 ; edam:is_output_of ?targetMotifSequenceAlignmentOperationMF_00704136 ; rdf:type edam:data_0869 ; rdf:value ?targetMotifMatchCigarQ8YQC1MF_00704127 . ?targetMotifMatchRegionMatch134 faldo:begin ?targetMotifMatchRegionMatchBeginMF_00704135 . ?targetMotifMatchRegionMatchBeginMF_00704135 faldo:position ?targetMotifMatchRegionMatchBeginPositionMF_00704128 ; faldo:reference ?thisSequence . ?targetMotifSequenceAlignmentOperationMF_00704136 edam:has_input signature:MF_00704 ; rdf:type edam:operation_0300 . BIND(STRLEN(REPLACE(SUBSTR(?templateMotifCigarQ8YQC1MF_00704125, 1, (STRLEN(?templateMotifCigarQ8YQC1MF_00704125) - STRLEN(REPLACE(?templateMotifCigarQ8YQC1MF_00704125, CONCAT('^(?:-*[^-]){', STR(((275 - ?templateMotifSequenceMatchBeginPositionQ8YQC1126) + 1)), '}'), '')))), '[a-z]', '')) AS ?step1137) . BIND((STRLEN(SUBSTR(?targetMotifMatchCigarQ8YQC1MF_00704127, 1, (STRLEN(?targetMotifMatchCigarQ8YQC1MF_00704127) - STRLEN(REPLACE(?targetMotifMatchCigarQ8YQC1MF_00704127, CONCAT('^(?:[a-z]*(?:[A-Z]|-)){', STR(?step1137), '}'), ''))))) - STRLEN(REPLACE(SUBSTR(?targetMotifMatchCigarQ8YQC1MF_00704127, 1, (STRLEN(?targetMotifMatchCigarQ8YQC1MF_00704127) - STRLEN(REPLACE(?targetMotifMatchCigarQ8YQC1MF_00704127, CONCAT('^(?:[a-z]*(?:[A-Z]|-)){', STR(?step1137), '}'), '')))), '[^-]', ''))) AS ?step2138) . BIND(((?step2138 + ?targetMotifMatchRegionMatchBeginPositionMF_00704128) - 1) AS ?thisPositionOn55) . BIND(?thisPositionOn55 AS ?thisPositionOn56) . BIND(?this AS ?pfs2t139) . BIND(URI(CONCAT(STR(?thisSequence), '#position', STR(?thisPositionOn55))) AS ?pfsb51) . BIND(URI(CONCAT(STR(?thisSequence), '#position', STR(?thisPositionOn56))) AS ?pfse52) . FILTER ((SUBSTR(?thisSequenceValue, ?thisPositionOn55, 1) = 'Y')) . BIND(URI(CONCAT(STR(?this), '#MF_00704a50')) AS ?annotation50) . BIND(?this AS ?pfs49) . } OPTIONAL { ?this a up:Protein . BIND(?this AS ?caseWithTag140) . } BIND(IF(BOUND(?tagFTGRP_1), ?caseWithTag140, ?UNBOUND_VARIABLE) AS ?case5) . } """ . .