@prefix rdf: <http://www.w3.org/1999/02/22-rdf-syntax-ns#> .
@prefix rdfs: <http://www.w3.org/2000/01/rdf-schema#> .
@prefix rdf4j: <http://rdf4j.org/schema/rdf4j#> .
@prefix sesame: <http://www.openrdf.org/schema/sesame#> .
@prefix owl: <http://www.w3.org/2002/07/owl#> .
@prefix xsd: <http://www.w3.org/2001/XMLSchema#> .
@prefix fn: <http://www.w3.org/2005/xpath-functions#> .

<http://purl.uniprot.org/unirules/MF_00871#construct> a <http://www.w3.org/ns/shacl#SPARQLRule>,
    <http://spinrdf.org/sp#Construct>;
  <https://hamap.expasy.org/rdf/vocab#addsTriple> <http://purl.uniprot.org/unirules/MF_00871#construct-template-8>,
    <http://purl.uniprot.org/unirules/MF_00871#construct-template-7>, <http://purl.uniprot.org/unirules/MF_00871#construct-template-9>,
    <http://purl.uniprot.org/unirules/MF_00871#construct-template-4>, <http://purl.uniprot.org/unirules/MF_00871#construct-template-19>,
    <http://purl.uniprot.org/unirules/MF_00871#construct-template-3>, <http://purl.uniprot.org/unirules/MF_00871#construct-template-6>,
    <http://purl.uniprot.org/unirules/MF_00871#construct-template-0>, <http://purl.uniprot.org/unirules/MF_00871#construct-template-5>,
    <http://purl.uniprot.org/unirules/MF_00871#construct-template-39>, <http://purl.uniprot.org/unirules/MF_00871#construct-template-15>,
    <http://purl.uniprot.org/unirules/MF_00871#construct-template-16>, <http://purl.uniprot.org/unirules/MF_00871#construct-template-2>,
    <http://purl.uniprot.org/unirules/MF_00871#construct-template-17>, <http://purl.uniprot.org/unirules/MF_00871#construct-template-1>,
    <http://purl.uniprot.org/unirules/MF_00871#construct-template-18>, <http://purl.uniprot.org/unirules/MF_00871#construct-template-35>,
    <http://purl.uniprot.org/unirules/MF_00871#construct-template-11>, <http://purl.uniprot.org/unirules/MF_00871#construct-template-12>,
    <http://purl.uniprot.org/unirules/MF_00871#construct-template-36>, <http://purl.uniprot.org/unirules/MF_00871#construct-template-13>,
    <http://purl.uniprot.org/unirules/MF_00871#construct-template-37>, <http://purl.uniprot.org/unirules/MF_00871#construct-template-38>,
    <http://purl.uniprot.org/unirules/MF_00871#construct-template-14>, <http://purl.uniprot.org/unirules/MF_00871#construct-template-31>,
    <http://purl.uniprot.org/unirules/MF_00871#construct-template-32>, <http://purl.uniprot.org/unirules/MF_00871#construct-template-33>,
    <http://purl.uniprot.org/unirules/MF_00871#construct-template-34>, <http://purl.uniprot.org/unirules/MF_00871#construct-template-10>,
    <http://purl.uniprot.org/unirules/MF_00871#construct-template-51>, <http://purl.uniprot.org/unirules/MF_00871#construct-template-52>,
    <http://purl.uniprot.org/unirules/MF_00871#construct-template-30>, <http://purl.uniprot.org/unirules/MF_00871#construct-template-50>,
    <http://purl.uniprot.org/unirules/MF_00871#construct-template-27>, <http://purl.uniprot.org/unirules/MF_00871#construct-template-28>,
    <http://purl.uniprot.org/unirules/MF_00871#construct-template-29>, <http://purl.uniprot.org/unirules/MF_00871#construct-template-23>,
    <http://purl.uniprot.org/unirules/MF_00871#construct-template-47>, <http://purl.uniprot.org/unirules/MF_00871#construct-template-24>,
    <http://purl.uniprot.org/unirules/MF_00871#construct-template-48>, <http://purl.uniprot.org/unirules/MF_00871#construct-template-49>,
    <http://purl.uniprot.org/unirules/MF_00871#construct-template-25>, <http://purl.uniprot.org/unirules/MF_00871#construct-template-26>,
    <http://purl.uniprot.org/unirules/MF_00871#construct-template-43>, <http://purl.uniprot.org/unirules/MF_00871#construct-template-20>,
    <http://purl.uniprot.org/unirules/MF_00871#construct-template-44>, <http://purl.uniprot.org/unirules/MF_00871#construct-template-45>,
    <http://purl.uniprot.org/unirules/MF_00871#construct-template-21>, <http://purl.uniprot.org/unirules/MF_00871#construct-template-46>,
    <http://purl.uniprot.org/unirules/MF_00871#construct-template-22>, <http://purl.uniprot.org/unirules/MF_00871#construct-template-40>,
    <http://purl.uniprot.org/unirules/MF_00871#construct-template-41>, <http://purl.uniprot.org/unirules/MF_00871#construct-template-42>;
  <http://www.w3.org/ns/shacl#prefixes> <http://purl.uniprot.org/unirules/>;
  <http://spinrdf.org/sp#where> <http://purl.uniprot.org/unirules/MF_00871#construct-where-list-0>;
  <http://spinrdf.org/sp#templates> <http://purl.uniprot.org/unirules/MF_00871#construct-template-list-0>;
  <http://www.w3.org/ns/shacl#construct> """CONSTRUCT {
  _:311343 up:source unirule:MF_00871 .
  _:311344 up:source unirule:MF_00871 .
  _:311345 up:source unirule:MF_00871 .
  _:311346 up:source unirule:MF_00871 .
  _:311347 up:source unirule:MF_00871 .
  _:311348 up:source unirule:MF_00871 .
  _:311349 up:source unirule:MF_00871 .
  _:311350 up:source unirule:MF_00871 .
  _:311351 up:source unirule:MF_00871 .
  _:311352 up:source unirule:MF_00871 .
  _:311353 up:source unirule:MF_00871 .
  _:311354 up:source unirule:MF_00871 .
  _:311355 up:source unirule:MF_00871 .
  _:311356 up:source unirule:MF_00871 .
  ?this up:alternativeName ?name1 ;
    up:annotation ?annotation3 ,
      ?annotation4 ,
      ?annotation5 ;
    up:classifiedWith GO:0000049 ,
      GO:0019843 ,
      GO:0043023 ,
      GO:0072344 ,
      keyword:648 ,
      keyword:694 ,
      keyword:699 ,
      keyword:820 ;
    up:recommendedName ?name0 .
  ?name0 up:fullName 'RQC P-site tRNA stabilizing factor' ;
    up:shortName 'RqcP' ;
    rdf:type up:Structured_Name .
  ?name1 up:fullName 'Ribosome-associated protein quality control protein P' ;
    rdf:type up:Structured_Name .
  ?gene2 skos:prefLabel 'rqcP' .
  ?annotation3 a up:Function_Annotation ;
    rdfs:comment 'Key component of the ribosome quality control system (RQC), a ribosome-associated complex that mediates the extraction of incompletely synthesized nascent chains from stalled ribosomes and their subsequent degradation. RqcH recruits Ala-charged tRNA, and with RqcP directs the elongation of stalled nascent chains on 50S ribosomal subunits, leading to non-templated C-terminal alanine extensions (Ala tail). The Ala tail promotes nascent chain degradation. RqcP is associated with the translocation-like movement of the peptidyl-tRNA from the A-site into the P-site.' .
  ?annotation4 a up:Subunit_Annotation ;
    rdfs:comment 'Associates with stalled 50S ribosomal subunits. Binds to RqcH, 23S rRNA and the P-site tRNA. Does not require RqcH for association with 50S subunits.' .
  ?annotation5 a up:Similarity_Annotation ;
    rdfs:comment 'Belongs to the RqcP family.' .
  _:311357 a rdf:Statement ;
    up:attribution _:311343 ;
    rdf:subject ?this ;
    rdf:predicate up:recommendedName ;
    rdf:object ?name0 .
  _:311358 a rdf:Statement ;
    up:attribution _:311344 ;
    rdf:subject ?this ;
    rdf:predicate up:alternativeName ;
    rdf:object ?name1 .
  _:311359 a rdf:Statement ;
    up:attribution _:311345 ;
    rdf:subject ?gene2 ;
    rdf:predicate up:encodedBy ;
    rdf:object ?gene2 .
  _:311360 a rdf:Statement ;
    up:attribution _:311346 ;
    rdf:subject ?this ;
    rdf:predicate up:annotation ;
    rdf:object ?annotation3 .
  _:311361 a rdf:Statement ;
    up:attribution _:311347 ;
    rdf:subject ?this ;
    rdf:predicate up:annotation ;
    rdf:object ?annotation4 .
  _:311362 a rdf:Statement ;
    up:attribution _:311348 ;
    rdf:subject ?this ;
    rdf:predicate up:annotation ;
    rdf:object ?annotation5 .
  _:311363 a rdf:Statement ;
    up:attribution _:311349 ;
    rdf:subject ?this ;
    rdf:predicate up:classifiedWith ;
    rdf:object keyword:648 .
  _:311364 a rdf:Statement ;
    up:attribution _:311350 ;
    rdf:subject ?this ;
    rdf:predicate up:classifiedWith ;
    rdf:object keyword:694 .
  _:311365 a rdf:Statement ;
    up:attribution _:311351 ;
    rdf:subject ?this ;
    rdf:predicate up:classifiedWith ;
    rdf:object keyword:699 .
  _:311366 a rdf:Statement ;
    up:attribution _:311352 ;
    rdf:subject ?this ;
    rdf:predicate up:classifiedWith ;
    rdf:object keyword:820 .
  _:311367 a rdf:Statement ;
    up:attribution _:311353 ;
    rdf:subject ?this ;
    rdf:predicate up:classifiedWith ;
    rdf:object GO:0019843 .
  _:311368 a rdf:Statement ;
    up:attribution _:311354 ;
    rdf:subject ?this ;
    rdf:predicate up:classifiedWith ;
    rdf:object GO:0000049 .
  _:311369 a rdf:Statement ;
    up:attribution _:311355 ;
    rdf:subject ?this ;
    rdf:predicate up:classifiedWith ;
    rdf:object GO:0043023 .
  _:311370 a rdf:Statement ;
    up:attribution _:311356 ;
    rdf:subject ?this ;
    rdf:predicate up:classifiedWith ;
    rdf:object GO:0072344 .
}
WHERE {
  #baseURI: http://purl.uniprot.org/unirule/MF_00871
  #Rule MF_00871 Created by:? on:2024-09-03 Modified by:Catherine Rivoire on:2024-09-04
  ?this up:organism ?thisOrganism ;
    rdfs:seeAlso signature:MF_00871 .
  ?thisOrganism rdfs:subClassOf+ taxon:2 .
  BIND(URI(CONCAT(STR(?this), '#MF_00871a0')) AS ?name0) .
  BIND(URI(CONCAT(STR(?this), '#MF_00871a1')) AS ?name1) .
  BIND(URI(CONCAT(STR(?this), '#MF_00871a3')) AS ?annotation3) .
  BIND(URI(CONCAT(STR(?this), '#MF_00871a4')) AS ?annotation4) .
  BIND(URI(CONCAT(STR(?this), '#MF_00871a5')) AS ?annotation5) .
}
""" .

<http://purl.uniprot.org/unirules/MF_00871> <http://www.w3.org/ns/shacl#rule> <http://purl.uniprot.org/unirules/MF_00871#construct> .