@prefix rdf: <http://www.w3.org/1999/02/22-rdf-syntax-ns#> .
@prefix rdfs: <http://www.w3.org/2000/01/rdf-schema#> .
@prefix rdf4j: <http://rdf4j.org/schema/rdf4j#> .
@prefix sesame: <http://www.openrdf.org/schema/sesame#> .
@prefix owl: <http://www.w3.org/2002/07/owl#> .
@prefix xsd: <http://www.w3.org/2001/XMLSchema#> .
@prefix fn: <http://www.w3.org/2005/xpath-functions#> .

<http://purl.uniprot.org/unirules/MF_01042#construct> a <http://www.w3.org/ns/shacl#SPARQLRule>,
    <http://spinrdf.org/sp#Construct>;
  <https://hamap.expasy.org/rdf/vocab#addsTriple> <http://purl.uniprot.org/unirules/MF_01042#construct-template-15>,
    <http://purl.uniprot.org/unirules/MF_01042#construct-template-16>, <http://purl.uniprot.org/unirules/MF_01042#construct-template-20>,
    <http://purl.uniprot.org/unirules/MF_01042#construct-template-12>, <http://purl.uniprot.org/unirules/MF_01042#construct-template-47>,
    <http://purl.uniprot.org/unirules/MF_01042#construct-template-30>, <http://purl.uniprot.org/unirules/MF_01042#construct-template-31>,
    <http://purl.uniprot.org/unirules/MF_01042#construct-template-26>, <http://purl.uniprot.org/unirules/MF_01042#construct-template-27>,
    <http://purl.uniprot.org/unirules/MF_01042#construct-template-29>, <http://purl.uniprot.org/unirules/MF_01042#construct-template-41>,
    <http://purl.uniprot.org/unirules/MF_01042#construct-template-42>, <http://purl.uniprot.org/unirules/MF_01042#construct-template-24>,
    <http://purl.uniprot.org/unirules/MF_01042#construct-template-19>, <http://purl.uniprot.org/unirules/MF_01042#construct-template-36>,
    <http://purl.uniprot.org/unirules/MF_01042#construct-template-0>, <http://purl.uniprot.org/unirules/MF_01042#construct-template-10>,
    <http://purl.uniprot.org/unirules/MF_01042#construct-template-37>, <http://purl.uniprot.org/unirules/MF_01042#construct-template-38>,
    <http://purl.uniprot.org/unirules/MF_01042#construct-template-40>, <http://purl.uniprot.org/unirules/MF_01042#construct-template-28>,
    <http://purl.uniprot.org/unirules/MF_01042#construct-template-25>, <http://purl.uniprot.org/unirules/MF_01042#construct-template-1>,
    <http://purl.uniprot.org/unirules/MF_01042#construct-template-2>, <http://purl.uniprot.org/unirules/MF_01042#construct-template-3>,
    <http://purl.uniprot.org/unirules/MF_01042#construct-template-6>, <http://purl.uniprot.org/unirules/MF_01042#construct-template-14>,
    <http://purl.uniprot.org/unirules/MF_01042#construct-template-9>, <http://purl.uniprot.org/unirules/MF_01042#construct-template-32>,
    <http://purl.uniprot.org/unirules/MF_01042#construct-template-33>, <http://purl.uniprot.org/unirules/MF_01042#construct-template-17>,
    <http://purl.uniprot.org/unirules/MF_01042#construct-template-18>, <http://purl.uniprot.org/unirules/MF_01042#construct-template-22>,
    <http://purl.uniprot.org/unirules/MF_01042#construct-template-45>, <http://purl.uniprot.org/unirules/MF_01042#construct-template-8>,
    <http://purl.uniprot.org/unirules/MF_01042#construct-template-11>, <http://purl.uniprot.org/unirules/MF_01042#construct-template-21>,
    <http://purl.uniprot.org/unirules/MF_01042#construct-template-34>, <http://purl.uniprot.org/unirules/MF_01042#construct-template-23>,
    <http://purl.uniprot.org/unirules/MF_01042#construct-template-39>, <http://purl.uniprot.org/unirules/MF_01042#construct-template-46>,
    <http://purl.uniprot.org/unirules/MF_01042#construct-template-44>, <http://purl.uniprot.org/unirules/MF_01042#construct-template-4>,
    <http://purl.uniprot.org/unirules/MF_01042#construct-template-7>, <http://purl.uniprot.org/unirules/MF_01042#construct-template-43>,
    <http://purl.uniprot.org/unirules/MF_01042#construct-template-5>, <http://purl.uniprot.org/unirules/MF_01042#construct-template-13>,
    <http://purl.uniprot.org/unirules/MF_01042#construct-template-35>;
  <http://www.w3.org/ns/shacl#prefixes> <http://purl.uniprot.org/unirules/>;
  <http://spinrdf.org/sp#where> <http://purl.uniprot.org/unirules/MF_01042#construct-where-list-0>;
  <http://spinrdf.org/sp#templates> <http://purl.uniprot.org/unirules/MF_01042#construct-template-list-0>;
  <http://www.w3.org/ns/shacl#construct> """CONSTRUCT {
  _:365990 up:source unirule:MF_01042 .
  _:365991 up:source unirule:MF_01042 .
  _:365992 up:source unirule:MF_01042 .
  _:365993 up:source unirule:MF_01042 .
  _:365994 up:source unirule:MF_01042 .
  _:365995 up:source unirule:MF_01042 .
  _:365996 up:source unirule:MF_01042 .
  _:365997 up:source unirule:MF_01042 .
  _:365998 up:source unirule:MF_01042 .
  _:365999 up:source unirule:MF_01042 .
  _:366000 up:source unirule:MF_01042 .
  _:366001 up:source unirule:MF_01042 .
  _:366002 up:source unirule:MF_01042 .
  ?this up:annotation ?annotation2 ,
      ?annotation3 ,
      ?annotation4 ;
    up:classifiedWith GO:0004521 ,
      GO:0019843 ,
      GO:0072344 ,
      keyword:255 ,
      keyword:378 ,
      keyword:540 ,
      keyword:694 ,
      keyword:699 ;
    up:recommendedName ?name0 .
  ?name0 up:ecName '3.1.-.-' ;
    up:fullName 'Ribosome rescue factor SmrB' ;
    rdf:type up:Structured_Name .
  ?gene1 skos:prefLabel 'smrB' .
  ?annotation2 a up:Function_Annotation ;
    rdfs:comment \"Acts as a ribosome collision sensor. Detects stalled/collided disomes (pairs of ribosomes where the leading ribosome is stalled and a second ribosome has collided with it) and endonucleolytically cleaves mRNA at the 5' boundary of the stalled ribosome. Stalled/collided disomes form a new interface (primarily via the 30S subunits) that binds SmrB. Cleaved mRNA becomes available for tmRNA ligation, leading to ribosomal subunit dissociation and rescue of stalled ribosomes.\" .
  ?annotation3 a up:Subunit_Annotation ;
    rdfs:comment 'Associates with collided ribosomes, but not with correctly translating polysomes.' .
  ?annotation4 a up:Similarity_Annotation ;
    rdfs:comment 'Belongs to the SmrB family.' .
  _:366003 a rdf:Statement ;
    up:attribution _:365990 ;
    rdf:subject ?this ;
    rdf:predicate up:recommendedName ;
    rdf:object ?name0 .
  _:366004 a rdf:Statement ;
    up:attribution _:365991 ;
    rdf:subject ?gene1 ;
    rdf:predicate up:encodedBy ;
    rdf:object ?gene1 .
  _:366005 a rdf:Statement ;
    up:attribution _:365992 ;
    rdf:subject ?this ;
    rdf:predicate up:annotation ;
    rdf:object ?annotation2 .
  _:366006 a rdf:Statement ;
    up:attribution _:365993 ;
    rdf:subject ?this ;
    rdf:predicate up:annotation ;
    rdf:object ?annotation3 .
  _:366007 a rdf:Statement ;
    up:attribution _:365994 ;
    rdf:subject ?this ;
    rdf:predicate up:annotation ;
    rdf:object ?annotation4 .
  _:366008 a rdf:Statement ;
    up:attribution _:365995 ;
    rdf:subject ?this ;
    rdf:predicate up:classifiedWith ;
    rdf:object keyword:255 .
  _:366009 a rdf:Statement ;
    up:attribution _:365996 ;
    rdf:subject ?this ;
    rdf:predicate up:classifiedWith ;
    rdf:object keyword:378 .
  _:366010 a rdf:Statement ;
    up:attribution _:365997 ;
    rdf:subject ?this ;
    rdf:predicate up:classifiedWith ;
    rdf:object keyword:540 .
  _:366011 a rdf:Statement ;
    up:attribution _:365998 ;
    rdf:subject ?this ;
    rdf:predicate up:classifiedWith ;
    rdf:object keyword:694 .
  _:366012 a rdf:Statement ;
    up:attribution _:365999 ;
    rdf:subject ?this ;
    rdf:predicate up:classifiedWith ;
    rdf:object keyword:699 .
  _:366013 a rdf:Statement ;
    up:attribution _:366000 ;
    rdf:subject ?this ;
    rdf:predicate up:classifiedWith ;
    rdf:object GO:0019843 .
  _:366014 a rdf:Statement ;
    up:attribution _:366001 ;
    rdf:subject ?this ;
    rdf:predicate up:classifiedWith ;
    rdf:object GO:0004521 .
  _:366015 a rdf:Statement ;
    up:attribution _:366002 ;
    rdf:subject ?this ;
    rdf:predicate up:classifiedWith ;
    rdf:object GO:0072344 .
}
WHERE {
  #baseURI: http://purl.uniprot.org/unirule/MF_01042
  #Rule MF_01042 Created by:? on:2005-02-28 Modified by:Andrea Auchincloss on:2024-08-22
  ?this up:organism ?thisOrganism ;
    rdfs:seeAlso signature:MF_01042 .
  ?thisOrganism rdfs:subClassOf+ taxon:1236 .
  BIND(URI(CONCAT(STR(?this), '#MF_01042a0')) AS ?name0) .
  BIND(URI(CONCAT(STR(?this), '#MF_01042a2')) AS ?annotation2) .
  BIND(URI(CONCAT(STR(?this), '#MF_01042a3')) AS ?annotation3) .
  BIND(URI(CONCAT(STR(?this), '#MF_01042a4')) AS ?annotation4) .
}
""" .

<http://purl.uniprot.org/unirules/MF_01042> <http://www.w3.org/ns/shacl#rule> <http://purl.uniprot.org/unirules/MF_01042#construct> .