CONSTRUCT { _:360345 up:source unirule:MF_01043 . _:360346 up:source unirule:MF_01043 . _:360347 up:source unirule:MF_01043 . _:360348 up:source unirule:MF_01043 . _:360349 up:source unirule:MF_01043 . _:360350 up:source unirule:MF_01043 . _:360351 up:source unirule:MF_01043 . _:360352 up:source unirule:MF_01043 . _:360353 up:source unirule:MF_01043 . _:360354 up:source unirule:MF_01043 . _:360355 up:source unirule:MF_01043 . _:360356 up:source unirule:MF_01043 . _:360357 up:source unirule:MF_01043 . _:360358 up:source unirule:MF_01043 . _:360359 up:source unirule:MF_01043 . _:360360 up:source unirule:MF_01043 . _:360361 up:source unirule:MF_01043 . _:360362 up:source unirule:MF_01043 . _:360363 up:source unirule:MF_01043 . _:360364 up:source unirule:MF_01043 . _:360365 up:source unirule:MF_01043 . _:360366 up:source unirule:MF_01043 . _:360367 up:source unirule:MF_01043 . _:360368 up:source unirule:MF_01043 . _:360369 up:source unirule:MF_01043 . _:360370 up:source unirule:MF_01043 . _:360371 up:source unirule:MF_01043 . _:360372 up:source unirule:MF_01043 . _:360373 up:source unirule:MF_01043 . _:360374 up:source unirule:MF_01043 . _:360375 up:source unirule:MF_01043 . _:360376 up:source unirule:MF_01043 . _:360377 up:source unirule:MF_01043 . _:360378 up:source unirule:MF_01043 . _:360379 up:source unirule:MF_01043 . _:360380 up:source unirule:MF_01043 . _:360381 up:source unirule:MF_01043 . _:360382 up:source unirule:MF_01043 . _:360383 up:source unirule:MF_01043 . ?this up:annotation ?annotation1 , ?annotation2 , ?annotation3 ; up:classifiedWith GO:0008654 , keyword:1003 , keyword:1133 , keyword:1208 , keyword:443 , keyword:444 , keyword:472 , keyword:594 , keyword:808 , keyword:812 . ?gene0 skos:prefLabel 'plsY' . ?annotation1 a up:Pathway_Annotation ; rdfs:comment 'Lipid metabolism; phospholipid metabolism.' . ?annotation2 a up:Subunit_Annotation ; rdfs:comment 'Probably interacts with PlsX.' . ?annotation3 a up:Similarity_Annotation ; rdfs:comment 'Belongs to the PlsY family.' . ?case4 up:classifiedWith keyword:997 . ?case6 up:alternativeName ?name8 , ?name9 ; up:classifiedWith GO:0004366 ; up:recommendedName ?name7 . ?name7 up:fullName 'Glycerol-3-phosphate acyltransferase' ; rdf:type up:Structured_Name . ?name8 up:ecName '2.3.1.15' , '2.3.1.n5' ; up:fullName 'G3P acyltransferase' ; up:shortName 'GPAT' ; rdf:type up:Structured_Name . ?name9 up:fullName 'Lysophosphatidic acid synthase' ; up:shortName 'LPA synthase' ; rdf:type up:Structured_Name . ?case10 up:alternativeName ?name12 , ?name13 , ?name14 , ?name15 ; up:classifiedWith GO:0043772 ; up:recommendedName ?name11 . ?name11 up:fullName 'Glycerol-3-phosphate acyltransferase' ; rdf:type up:Structured_Name . ?name12 up:fullName 'Acyl-PO4 G3P acyltransferase' ; rdf:type up:Structured_Name . ?name13 up:fullName 'Acyl-phosphate--glycerol-3-phosphate acyltransferase' ; rdf:type up:Structured_Name . ?name14 up:ecName '2.3.1.275' ; up:fullName 'G3P acyltransferase' ; up:shortName 'GPAT' ; rdf:type up:Structured_Name . ?name15 up:fullName 'Lysophosphatidic acid synthase' ; up:shortName 'LPA synthase' ; rdf:type up:Structured_Name . ?pfs16 up:annotation ?annotation17 . ?annotation17 faldo:begin ?pfsb18 ; faldo:end ?pfse19 ; rdf:type up:Topological_Domain_Annotation ; rdfs:comment 'Periplasmic' . ?pfsb18 faldo:position ?thisPositionOn20 ; rdf:type faldo:ExactPosition . ?pfse19 faldo:position ?thisPositionOn21 ; rdf:type faldo:ExactPosition . ?pfs22 up:annotation ?annotation23 . ?annotation23 faldo:begin ?pfsb24 ; faldo:end ?pfse25 ; rdf:type up:Transmembrane_Annotation ; rdfs:comment 'Helical' . ?pfsb24 faldo:position ?thisPositionOn26 ; rdf:type faldo:ExactPosition . ?pfse25 faldo:position ?thisPositionOn27 ; rdf:type faldo:ExactPosition . ?pfs28 up:annotation ?annotation29 . ?annotation29 faldo:begin ?pfsb30 ; faldo:end ?pfse31 ; rdf:type up:Topological_Domain_Annotation ; rdfs:comment 'Cytoplasmic' . ?pfsb30 faldo:position ?thisPositionOn32 ; rdf:type faldo:ExactPosition . ?pfse31 faldo:position ?thisPositionOn33 ; rdf:type faldo:ExactPosition . ?pfs34 up:annotation ?annotation35 . ?annotation35 faldo:begin ?pfsb36 ; faldo:end ?pfse37 ; rdf:type up:Transmembrane_Annotation ; rdfs:comment 'Helical' . ?pfsb36 faldo:position ?thisPositionOn38 ; rdf:type faldo:ExactPosition . ?pfse37 faldo:position ?thisPositionOn39 ; rdf:type faldo:ExactPosition . ?pfs40 up:annotation ?annotation41 . ?annotation41 faldo:begin ?pfsb42 ; faldo:end ?pfse43 ; rdf:type up:Topological_Domain_Annotation ; rdfs:comment 'Periplasmic' . ?pfsb42 faldo:position ?thisPositionOn44 ; rdf:type faldo:ExactPosition . ?pfse43 faldo:position ?thisPositionOn45 ; rdf:type faldo:ExactPosition . ?pfs46 up:annotation ?annotation47 . ?annotation47 faldo:begin ?pfsb48 ; faldo:end ?pfse49 ; rdf:type up:Transmembrane_Annotation ; rdfs:comment 'Helical' . ?pfsb48 faldo:position ?thisPositionOn50 ; rdf:type faldo:ExactPosition . ?pfse49 faldo:position ?thisPositionOn51 ; rdf:type faldo:ExactPosition . ?pfs52 up:annotation ?annotation53 . ?annotation53 faldo:begin ?pfsb54 ; faldo:end ?pfse55 ; rdf:type up:Topological_Domain_Annotation ; rdfs:comment 'Cytoplasmic' . ?pfsb54 faldo:position ?thisPositionOn56 ; rdf:type faldo:ExactPosition . ?pfse55 faldo:position ?thisPositionOn57 ; rdf:type faldo:ExactPosition . ?pfs58 up:annotation ?annotation59 . ?annotation59 faldo:begin ?pfsb60 ; faldo:end ?pfse61 ; rdf:type up:Transmembrane_Annotation ; rdfs:comment 'Helical' . ?pfsb60 faldo:position ?thisPositionOn62 ; rdf:type faldo:ExactPosition . ?pfse61 faldo:position ?thisPositionOn63 ; rdf:type faldo:ExactPosition . ?pfs64 up:annotation ?annotation65 . ?annotation65 faldo:begin ?pfsb66 ; faldo:end ?pfse67 ; rdf:type up:Topological_Domain_Annotation ; rdfs:comment 'Periplasmic' . ?pfsb66 faldo:position ?thisPositionOn68 ; rdf:type faldo:ExactPosition . ?pfse67 faldo:position ?thisPositionOn69 ; rdf:type faldo:ExactPosition . ?pfs70 up:annotation ?annotation71 . ?annotation71 faldo:begin ?pfsb72 ; faldo:end ?pfse73 ; rdf:type up:Transmembrane_Annotation ; rdfs:comment 'Helical' . ?pfsb72 faldo:position ?thisPositionOn74 ; rdf:type faldo:ExactPosition . ?pfse73 faldo:position ?thisPositionOn75 ; rdf:type faldo:ExactPosition . ?pfs76 up:annotation ?annotation77 . ?annotation77 faldo:begin ?pfsb78 ; faldo:end ?pfse79 ; rdf:type up:Topological_Domain_Annotation ; rdfs:comment 'Cytoplasmic' . ?pfsb78 faldo:position ?thisPositionOn80 ; rdf:type faldo:ExactPosition . ?pfse79 faldo:position ?thisPositionOn81 ; rdf:type faldo:ExactPosition . ?sam82 up:classifiedWith keyword:1133 , keyword:472 , keyword:812 . ?transmembrane83 faldo:begin ?transmembraneb84 ; faldo:end ?transmembranee85 . ?transmembraneb84 faldo:position ?transmembranebp86 . ?transmembranee85 faldo:position ?transmembraneep87 . ?keyword88 up:range ?transmembrane83 . ?keyword89 up:range ?transmembrane83 . ?keyword90 up:range ?transmembrane83 . _:360384 a rdf:Statement ; up:attribution _:360345 ; rdf:subject ?gene0 ; rdf:predicate up:encodedBy ; rdf:object ?gene0 . _:360385 a rdf:Statement ; up:attribution _:360346 ; rdf:subject ?this ; rdf:predicate up:annotation ; rdf:object ?annotation1 . _:360386 a rdf:Statement ; up:attribution _:360347 ; rdf:subject ?this ; rdf:predicate up:annotation ; rdf:object ?annotation2 . _:360387 a rdf:Statement ; up:attribution _:360348 ; rdf:subject ?this ; rdf:predicate up:annotation ; rdf:object ?annotation3 . _:360388 a rdf:Statement ; up:attribution _:360349 ; rdf:subject ?this ; rdf:predicate up:classifiedWith ; rdf:object keyword:1003 . _:360389 a rdf:Statement ; up:attribution _:360350 ; rdf:subject ?this ; rdf:predicate up:classifiedWith ; rdf:object keyword:444 . _:360390 a rdf:Statement ; up:attribution _:360351 ; rdf:subject ?this ; rdf:predicate up:classifiedWith ; rdf:object keyword:443 . _:360391 a rdf:Statement ; up:attribution _:360352 ; rdf:subject ?this ; rdf:predicate up:classifiedWith ; rdf:object keyword:472 . _:360392 a rdf:Statement ; up:attribution _:360353 ; rdf:subject ?this ; rdf:predicate up:classifiedWith ; rdf:object keyword:594 . _:360393 a rdf:Statement ; up:attribution _:360354 ; rdf:subject ?this ; rdf:predicate up:classifiedWith ; rdf:object keyword:1208 . _:360394 a rdf:Statement ; up:attribution _:360355 ; rdf:subject ?this ; rdf:predicate up:classifiedWith ; rdf:object keyword:808 . _:360395 a rdf:Statement ; up:attribution _:360356 ; rdf:subject ?this ; rdf:predicate up:classifiedWith ; rdf:object keyword:812 . _:360396 a rdf:Statement ; up:attribution _:360357 ; rdf:subject ?this ; rdf:predicate up:classifiedWith ; rdf:object keyword:1133 . _:360397 a rdf:Statement ; up:attribution _:360358 ; rdf:subject ?this ; rdf:predicate up:classifiedWith ; rdf:object GO:0008654 . _:360398 a rdf:Statement ; up:attribution _:360359 ; rdf:subject ?case4 ; rdf:predicate up:classifiedWith ; rdf:object keyword:997 . _:360399 a rdf:Statement ; up:attribution _:360360 ; rdf:subject ?case6 ; rdf:predicate up:recommendedName ; rdf:object ?name7 . _:360400 a rdf:Statement ; up:attribution _:360361 ; rdf:subject ?case6 ; rdf:predicate up:alternativeName ; rdf:object ?name8 . _:360401 a rdf:Statement ; up:attribution _:360362 ; rdf:subject ?case6 ; rdf:predicate up:alternativeName ; rdf:object ?name9 . _:360402 a rdf:Statement ; up:attribution _:360363 ; rdf:subject ?case6 ; rdf:predicate up:classifiedWith ; rdf:object GO:0004366 . _:360403 a rdf:Statement ; up:attribution _:360364 ; rdf:subject ?case10 ; rdf:predicate up:recommendedName ; rdf:object ?name11 . _:360404 a rdf:Statement ; up:attribution _:360365 ; rdf:subject ?case10 ; rdf:predicate up:alternativeName ; rdf:object ?name12 . _:360405 a rdf:Statement ; up:attribution _:360366 ; rdf:subject ?case10 ; rdf:predicate up:alternativeName ; rdf:object ?name13 . _:360406 a rdf:Statement ; up:attribution _:360367 ; rdf:subject ?case10 ; rdf:predicate up:alternativeName ; rdf:object ?name14 . _:360407 a rdf:Statement ; up:attribution _:360368 ; rdf:subject ?case10 ; rdf:predicate up:alternativeName ; rdf:object ?name15 . _:360408 a rdf:Statement ; up:attribution _:360369 ; rdf:subject ?case10 ; rdf:predicate up:classifiedWith ; rdf:object GO:0043772 . _:360409 a rdf:Statement ; up:source unirule:MF_01043 ; rdf:subject ?pfs16 ; rdf:predicate up:annotation ; rdf:object ?annotation17 . _:360410 a rdf:Statement ; up:attribution _:360370 ; rdf:subject ?pfs16 ; rdf:predicate up:annotation ; rdf:object ?annotation17 . _:360411 a rdf:Statement ; up:source unirule:MF_01043 ; rdf:subject ?pfs22 ; rdf:predicate up:annotation ; rdf:object ?annotation23 . _:360412 a rdf:Statement ; up:attribution _:360371 ; rdf:subject ?pfs22 ; rdf:predicate up:annotation ; rdf:object ?annotation23 . _:360413 a rdf:Statement ; up:source unirule:MF_01043 ; rdf:subject ?pfs28 ; rdf:predicate up:annotation ; rdf:object ?annotation29 . _:360414 a rdf:Statement ; up:attribution _:360372 ; rdf:subject ?pfs28 ; rdf:predicate up:annotation ; rdf:object ?annotation29 . _:360415 a rdf:Statement ; up:source unirule:MF_01043 ; rdf:subject ?pfs34 ; rdf:predicate up:annotation ; rdf:object ?annotation35 . _:360416 a rdf:Statement ; up:attribution _:360373 ; rdf:subject ?pfs34 ; rdf:predicate up:annotation ; rdf:object ?annotation35 . _:360417 a rdf:Statement ; up:source unirule:MF_01043 ; rdf:subject ?pfs40 ; rdf:predicate up:annotation ; rdf:object ?annotation41 . _:360418 a rdf:Statement ; up:attribution _:360374 ; rdf:subject ?pfs40 ; rdf:predicate up:annotation ; rdf:object ?annotation41 . _:360419 a rdf:Statement ; up:source unirule:MF_01043 ; rdf:subject ?pfs46 ; rdf:predicate up:annotation ; rdf:object ?annotation47 . _:360420 a rdf:Statement ; up:attribution _:360375 ; rdf:subject ?pfs46 ; rdf:predicate up:annotation ; rdf:object ?annotation47 . _:360421 a rdf:Statement ; up:source unirule:MF_01043 ; rdf:subject ?pfs52 ; rdf:predicate up:annotation ; rdf:object ?annotation53 . _:360422 a rdf:Statement ; up:attribution _:360376 ; rdf:subject ?pfs52 ; rdf:predicate up:annotation ; rdf:object ?annotation53 . _:360423 a rdf:Statement ; up:source unirule:MF_01043 ; rdf:subject ?pfs58 ; rdf:predicate up:annotation ; rdf:object ?annotation59 . _:360424 a rdf:Statement ; up:attribution _:360377 ; rdf:subject ?pfs58 ; rdf:predicate up:annotation ; rdf:object ?annotation59 . _:360425 a rdf:Statement ; up:source unirule:MF_01043 ; rdf:subject ?pfs64 ; rdf:predicate up:annotation ; rdf:object ?annotation65 . _:360426 a rdf:Statement ; up:attribution _:360378 ; rdf:subject ?pfs64 ; rdf:predicate up:annotation ; rdf:object ?annotation65 . _:360427 a rdf:Statement ; up:source unirule:MF_01043 ; rdf:subject ?pfs70 ; rdf:predicate up:annotation ; rdf:object ?annotation71 . _:360428 a rdf:Statement ; up:attribution _:360379 ; rdf:subject ?pfs70 ; rdf:predicate up:annotation ; rdf:object ?annotation71 . _:360429 a rdf:Statement ; up:source unirule:MF_01043 ; rdf:subject ?pfs76 ; rdf:predicate up:annotation ; rdf:object ?annotation77 . _:360430 a rdf:Statement ; up:attribution _:360380 ; rdf:subject ?pfs76 ; rdf:predicate up:annotation ; rdf:object ?annotation77 . _:360431 a rdf:Statement ; up:attribution _:360381 ; rdf:subject ?sam82 ; rdf:predicate up:classifiedWith ; rdf:object keyword:472 . _:360432 a rdf:Statement ; up:attribution _:360382 ; rdf:subject ?sam82 ; rdf:predicate up:classifiedWith ; rdf:object keyword:812 . _:360433 a rdf:Statement ; up:attribution _:360383 ; rdf:subject ?sam82 ; rdf:predicate up:classifiedWith ; rdf:object keyword:1133 . } WHERE { #baseURI: http://purl.uniprot.org/unirule/MF_01043 #Rule MF_01043 Created by:rivoire on:2003-01-24 Modified by:ecastro on:2023-11-28 ?this up:organism ?thisOrganism ; rdfs:seeAlso signature:MF_01043 . ?thisOrganism rdfs:subClassOf+ taxon:2 . BIND(URI(CONCAT(STR(?this), '#MF_01043a1')) AS ?annotation1) . BIND(URI(CONCAT(STR(?this), '#MF_01043a2')) AS ?annotation2) . BIND(URI(CONCAT(STR(?this), '#MF_01043a3')) AS ?annotation3) . OPTIONAL { ?this up:sequence ?thisSequence . ?thisSequence rdf:value ?thisSequenceValue . ?templateMotifMatch96 faldo:location ?templateMotifSequenceMatchRegionP6078297 ; edam:is_output_of ?templateMotifSequenceProfileAlignmentOperationP6078299 ; rdf:type edam:data_0869 ; rdf:value ?templateMotifCigarP60782MF_0104392 . ?templateMotifSequenceMatchRegionP6078297 faldo:begin ?templateMotifSequenceMatchBeginP6078298 . ?templateMotifSequenceMatchBeginP6078298 faldo:position ?templateMotifSequenceMatchBeginPositionP6078293 ; faldo:reference isoform:P60782-1 . ?templateMotifSequenceProfileAlignmentOperationP6078299 edam:has_input signature:MF_01043 ; rdf:type edam:operation_0300 . ?targetMotifMatch100 faldo:location ?targetMotifMatchRegionMatch101 ; edam:is_output_of ?targetMotifSequenceAlignmentOperationMF_01043103 ; rdf:type edam:data_0869 ; rdf:value ?targetMotifMatchCigarP60782MF_0104394 . ?targetMotifMatchRegionMatch101 faldo:begin ?targetMotifMatchRegionMatchBeginMF_01043102 . ?targetMotifMatchRegionMatchBeginMF_01043102 faldo:position ?targetMotifMatchRegionMatchBeginPositionMF_0104395 ; faldo:reference ?thisSequence . ?targetMotifSequenceAlignmentOperationMF_01043103 edam:has_input signature:MF_01043 ; rdf:type edam:operation_0300 . VALUES ?supertaxon91 {taxon:590 taxon:620 taxon:561} ?this up:organism ?thisOrganism . ?thisOrganism rdfs:subClassOf+ ?supertaxon91 . BIND(STRLEN(REPLACE(SUBSTR(?templateMotifCigarP60782MF_0104392, 1, (STRLEN(?templateMotifCigarP60782MF_0104392) - STRLEN(REPLACE(?templateMotifCigarP60782MF_0104392, CONCAT('^(?:-*[^-]){', STR(((1 - ?templateMotifSequenceMatchBeginPositionP6078293) + 1)), '}'), '')))), '[a-z]', '')) AS ?step1104) . BIND((STRLEN(SUBSTR(?targetMotifMatchCigarP60782MF_0104394, 1, (STRLEN(?targetMotifMatchCigarP60782MF_0104394) - STRLEN(REPLACE(?targetMotifMatchCigarP60782MF_0104394, CONCAT('^(?:[a-z]*(?:[A-Z]|-)){', STR(?step1104), '}'), ''))))) - STRLEN(REPLACE(SUBSTR(?targetMotifMatchCigarP60782MF_0104394, 1, (STRLEN(?targetMotifMatchCigarP60782MF_0104394) - STRLEN(REPLACE(?targetMotifMatchCigarP60782MF_0104394, CONCAT('^(?:[a-z]*(?:[A-Z]|-)){', STR(?step1104), '}'), '')))), '[^-]', ''))) AS ?step2105) . BIND(((?step2105 + ?targetMotifMatchRegionMatchBeginPositionMF_0104395) - 1) AS ?thisPositionOn20) . BIND(STRLEN(REPLACE(SUBSTR(?templateMotifCigarP60782MF_0104392, 1, (STRLEN(?templateMotifCigarP60782MF_0104392) - STRLEN(REPLACE(?templateMotifCigarP60782MF_0104392, CONCAT('^(?:-*[^-]){', STR(((3 - ?templateMotifSequenceMatchBeginPositionP6078293) + 1)), '}'), '')))), '[a-z]', '')) AS ?step1106) . BIND((STRLEN(SUBSTR(?targetMotifMatchCigarP60782MF_0104394, 1, (STRLEN(?targetMotifMatchCigarP60782MF_0104394) - STRLEN(REPLACE(?targetMotifMatchCigarP60782MF_0104394, CONCAT('^(?:[a-z]*(?:[A-Z]|-)){', STR(?step1106), '}'), ''))))) - STRLEN(REPLACE(SUBSTR(?targetMotifMatchCigarP60782MF_0104394, 1, (STRLEN(?targetMotifMatchCigarP60782MF_0104394) - STRLEN(REPLACE(?targetMotifMatchCigarP60782MF_0104394, CONCAT('^(?:[a-z]*(?:[A-Z]|-)){', STR(?step1106), '}'), '')))), '[^-]', ''))) AS ?step2107) . BIND(((?step2107 + ?targetMotifMatchRegionMatchBeginPositionMF_0104395) - 1) AS ?thisPositionOn21) . BIND(?this AS ?pfs1t108) . BIND(URI(CONCAT(STR(?thisSequence), '#position', STR(?thisPositionOn20))) AS ?pfsb18) . BIND(URI(CONCAT(STR(?thisSequence), '#position', STR(?thisPositionOn21))) AS ?pfse19) . FILTER ((BOUND(?thisPositionOn20) && BOUND(?thisPositionOn21))) . BIND(URI(CONCAT(STR(?this), '#MF_01043a17')) AS ?annotation17) . BIND(?this AS ?pfs16) . } OPTIONAL { ?this up:sequence ?thisSequence . ?thisSequence rdf:value ?thisSequenceValue . ?templateMotifMatch114 faldo:location ?templateMotifSequenceMatchRegionP60782115 ; edam:is_output_of ?templateMotifSequenceProfileAlignmentOperationP60782117 ; rdf:type edam:data_0869 ; rdf:value ?templateMotifCigarP60782MF_01043110 . ?templateMotifSequenceMatchRegionP60782115 faldo:begin ?templateMotifSequenceMatchBeginP60782116 . ?templateMotifSequenceMatchBeginP60782116 faldo:position ?templateMotifSequenceMatchBeginPositionP60782111 ; faldo:reference isoform:P60782-1 . ?templateMotifSequenceProfileAlignmentOperationP60782117 edam:has_input signature:MF_01043 ; rdf:type edam:operation_0300 . ?targetMotifMatch118 faldo:location ?targetMotifMatchRegionMatch119 ; edam:is_output_of ?targetMotifSequenceAlignmentOperationMF_01043121 ; rdf:type edam:data_0869 ; rdf:value ?targetMotifMatchCigarP60782MF_01043112 . ?targetMotifMatchRegionMatch119 faldo:begin ?targetMotifMatchRegionMatchBeginMF_01043120 . ?targetMotifMatchRegionMatchBeginMF_01043120 faldo:position ?targetMotifMatchRegionMatchBeginPositionMF_01043113 ; faldo:reference ?thisSequence . ?targetMotifSequenceAlignmentOperationMF_01043121 edam:has_input signature:MF_01043 ; rdf:type edam:operation_0300 . VALUES ?supertaxon109 {taxon:590 taxon:620 taxon:561} ?this up:organism ?thisOrganism . ?thisOrganism rdfs:subClassOf+ ?supertaxon109 . BIND(STRLEN(REPLACE(SUBSTR(?templateMotifCigarP60782MF_01043110, 1, (STRLEN(?templateMotifCigarP60782MF_01043110) - STRLEN(REPLACE(?templateMotifCigarP60782MF_01043110, CONCAT('^(?:-*[^-]){', STR(((4 - ?templateMotifSequenceMatchBeginPositionP60782111) + 1)), '}'), '')))), '[a-z]', '')) AS ?step1122) . BIND((STRLEN(SUBSTR(?targetMotifMatchCigarP60782MF_01043112, 1, (STRLEN(?targetMotifMatchCigarP60782MF_01043112) - STRLEN(REPLACE(?targetMotifMatchCigarP60782MF_01043112, CONCAT('^(?:[a-z]*(?:[A-Z]|-)){', STR(?step1122), '}'), ''))))) - STRLEN(REPLACE(SUBSTR(?targetMotifMatchCigarP60782MF_01043112, 1, (STRLEN(?targetMotifMatchCigarP60782MF_01043112) - STRLEN(REPLACE(?targetMotifMatchCigarP60782MF_01043112, CONCAT('^(?:[a-z]*(?:[A-Z]|-)){', STR(?step1122), '}'), '')))), '[^-]', ''))) AS ?step2123) . BIND(((?step2123 + ?targetMotifMatchRegionMatchBeginPositionMF_01043113) - 1) AS ?thisPositionOn26) . BIND(STRLEN(REPLACE(SUBSTR(?templateMotifCigarP60782MF_01043110, 1, (STRLEN(?templateMotifCigarP60782MF_01043110) - STRLEN(REPLACE(?templateMotifCigarP60782MF_01043110, CONCAT('^(?:-*[^-]){', STR(((24 - ?templateMotifSequenceMatchBeginPositionP60782111) + 1)), '}'), '')))), '[a-z]', '')) AS ?step1124) . BIND((STRLEN(SUBSTR(?targetMotifMatchCigarP60782MF_01043112, 1, (STRLEN(?targetMotifMatchCigarP60782MF_01043112) - STRLEN(REPLACE(?targetMotifMatchCigarP60782MF_01043112, CONCAT('^(?:[a-z]*(?:[A-Z]|-)){', STR(?step1124), '}'), ''))))) - STRLEN(REPLACE(SUBSTR(?targetMotifMatchCigarP60782MF_01043112, 1, (STRLEN(?targetMotifMatchCigarP60782MF_01043112) - STRLEN(REPLACE(?targetMotifMatchCigarP60782MF_01043112, CONCAT('^(?:[a-z]*(?:[A-Z]|-)){', STR(?step1124), '}'), '')))), '[^-]', ''))) AS ?step2125) . BIND(((?step2125 + ?targetMotifMatchRegionMatchBeginPositionMF_01043113) - 1) AS ?thisPositionOn27) . BIND(?this AS ?pfs1t126) . BIND(URI(CONCAT(STR(?thisSequence), '#position', STR(?thisPositionOn26))) AS ?pfsb24) . BIND(URI(CONCAT(STR(?thisSequence), '#position', STR(?thisPositionOn27))) AS ?pfse25) . FILTER ((BOUND(?thisPositionOn26) && BOUND(?thisPositionOn27))) . BIND(URI(CONCAT(STR(?this), '#MF_01043a23')) AS ?annotation23) . BIND(?this AS ?pfs22) . } OPTIONAL { ?this up:sequence ?thisSequence . ?thisSequence rdf:value ?thisSequenceValue . ?templateMotifMatch132 faldo:location ?templateMotifSequenceMatchRegionP60782133 ; edam:is_output_of ?templateMotifSequenceProfileAlignmentOperationP60782135 ; rdf:type edam:data_0869 ; rdf:value ?templateMotifCigarP60782MF_01043128 . ?templateMotifSequenceMatchRegionP60782133 faldo:begin ?templateMotifSequenceMatchBeginP60782134 . ?templateMotifSequenceMatchBeginP60782134 faldo:position ?templateMotifSequenceMatchBeginPositionP60782129 ; faldo:reference isoform:P60782-1 . ?templateMotifSequenceProfileAlignmentOperationP60782135 edam:has_input signature:MF_01043 ; rdf:type edam:operation_0300 . ?targetMotifMatch136 faldo:location ?targetMotifMatchRegionMatch137 ; edam:is_output_of ?targetMotifSequenceAlignmentOperationMF_01043139 ; rdf:type edam:data_0869 ; rdf:value ?targetMotifMatchCigarP60782MF_01043130 . ?targetMotifMatchRegionMatch137 faldo:begin ?targetMotifMatchRegionMatchBeginMF_01043138 . ?targetMotifMatchRegionMatchBeginMF_01043138 faldo:position ?targetMotifMatchRegionMatchBeginPositionMF_01043131 ; faldo:reference ?thisSequence . ?targetMotifSequenceAlignmentOperationMF_01043139 edam:has_input signature:MF_01043 ; rdf:type edam:operation_0300 . VALUES ?supertaxon127 {taxon:590 taxon:620 taxon:561} ?this up:organism ?thisOrganism . ?thisOrganism rdfs:subClassOf+ ?supertaxon127 . BIND(STRLEN(REPLACE(SUBSTR(?templateMotifCigarP60782MF_01043128, 1, (STRLEN(?templateMotifCigarP60782MF_01043128) - STRLEN(REPLACE(?templateMotifCigarP60782MF_01043128, CONCAT('^(?:-*[^-]){', STR(((25 - ?templateMotifSequenceMatchBeginPositionP60782129) + 1)), '}'), '')))), '[a-z]', '')) AS ?step1140) . BIND((STRLEN(SUBSTR(?targetMotifMatchCigarP60782MF_01043130, 1, (STRLEN(?targetMotifMatchCigarP60782MF_01043130) - STRLEN(REPLACE(?targetMotifMatchCigarP60782MF_01043130, CONCAT('^(?:[a-z]*(?:[A-Z]|-)){', STR(?step1140), '}'), ''))))) - STRLEN(REPLACE(SUBSTR(?targetMotifMatchCigarP60782MF_01043130, 1, (STRLEN(?targetMotifMatchCigarP60782MF_01043130) - STRLEN(REPLACE(?targetMotifMatchCigarP60782MF_01043130, CONCAT('^(?:[a-z]*(?:[A-Z]|-)){', STR(?step1140), '}'), '')))), '[^-]', ''))) AS ?step2141) . BIND(((?step2141 + ?targetMotifMatchRegionMatchBeginPositionMF_01043131) - 1) AS ?thisPositionOn32) . BIND(STRLEN(REPLACE(SUBSTR(?templateMotifCigarP60782MF_01043128, 1, (STRLEN(?templateMotifCigarP60782MF_01043128) - STRLEN(REPLACE(?templateMotifCigarP60782MF_01043128, CONCAT('^(?:-*[^-]){', STR(((52 - ?templateMotifSequenceMatchBeginPositionP60782129) + 1)), '}'), '')))), '[a-z]', '')) AS ?step1142) . BIND((STRLEN(SUBSTR(?targetMotifMatchCigarP60782MF_01043130, 1, (STRLEN(?targetMotifMatchCigarP60782MF_01043130) - STRLEN(REPLACE(?targetMotifMatchCigarP60782MF_01043130, CONCAT('^(?:[a-z]*(?:[A-Z]|-)){', STR(?step1142), '}'), ''))))) - STRLEN(REPLACE(SUBSTR(?targetMotifMatchCigarP60782MF_01043130, 1, (STRLEN(?targetMotifMatchCigarP60782MF_01043130) - STRLEN(REPLACE(?targetMotifMatchCigarP60782MF_01043130, CONCAT('^(?:[a-z]*(?:[A-Z]|-)){', STR(?step1142), '}'), '')))), '[^-]', ''))) AS ?step2143) . BIND(((?step2143 + ?targetMotifMatchRegionMatchBeginPositionMF_01043131) - 1) AS ?thisPositionOn33) . BIND(?this AS ?pfs1t144) . BIND(URI(CONCAT(STR(?thisSequence), '#position', STR(?thisPositionOn32))) AS ?pfsb30) . BIND(URI(CONCAT(STR(?thisSequence), '#position', STR(?thisPositionOn33))) AS ?pfse31) . FILTER ((BOUND(?thisPositionOn32) && BOUND(?thisPositionOn33))) . BIND(URI(CONCAT(STR(?this), '#MF_01043a29')) AS ?annotation29) . BIND(?this AS ?pfs28) . } OPTIONAL { ?this up:sequence ?thisSequence . ?thisSequence rdf:value ?thisSequenceValue . ?templateMotifMatch150 faldo:location ?templateMotifSequenceMatchRegionP60782151 ; edam:is_output_of ?templateMotifSequenceProfileAlignmentOperationP60782153 ; rdf:type edam:data_0869 ; rdf:value ?templateMotifCigarP60782MF_01043146 . ?templateMotifSequenceMatchRegionP60782151 faldo:begin ?templateMotifSequenceMatchBeginP60782152 . ?templateMotifSequenceMatchBeginP60782152 faldo:position ?templateMotifSequenceMatchBeginPositionP60782147 ; faldo:reference isoform:P60782-1 . ?templateMotifSequenceProfileAlignmentOperationP60782153 edam:has_input signature:MF_01043 ; rdf:type edam:operation_0300 . ?targetMotifMatch154 faldo:location ?targetMotifMatchRegionMatch155 ; edam:is_output_of ?targetMotifSequenceAlignmentOperationMF_01043157 ; rdf:type edam:data_0869 ; rdf:value ?targetMotifMatchCigarP60782MF_01043148 . ?targetMotifMatchRegionMatch155 faldo:begin ?targetMotifMatchRegionMatchBeginMF_01043156 . ?targetMotifMatchRegionMatchBeginMF_01043156 faldo:position ?targetMotifMatchRegionMatchBeginPositionMF_01043149 ; faldo:reference ?thisSequence . ?targetMotifSequenceAlignmentOperationMF_01043157 edam:has_input signature:MF_01043 ; rdf:type edam:operation_0300 . VALUES ?supertaxon145 {taxon:590 taxon:620 taxon:561} ?this up:organism ?thisOrganism . ?thisOrganism rdfs:subClassOf+ ?supertaxon145 . BIND(STRLEN(REPLACE(SUBSTR(?templateMotifCigarP60782MF_01043146, 1, (STRLEN(?templateMotifCigarP60782MF_01043146) - STRLEN(REPLACE(?templateMotifCigarP60782MF_01043146, CONCAT('^(?:-*[^-]){', STR(((53 - ?templateMotifSequenceMatchBeginPositionP60782147) + 1)), '}'), '')))), '[a-z]', '')) AS ?step1158) . BIND((STRLEN(SUBSTR(?targetMotifMatchCigarP60782MF_01043148, 1, (STRLEN(?targetMotifMatchCigarP60782MF_01043148) - STRLEN(REPLACE(?targetMotifMatchCigarP60782MF_01043148, CONCAT('^(?:[a-z]*(?:[A-Z]|-)){', STR(?step1158), '}'), ''))))) - STRLEN(REPLACE(SUBSTR(?targetMotifMatchCigarP60782MF_01043148, 1, (STRLEN(?targetMotifMatchCigarP60782MF_01043148) - STRLEN(REPLACE(?targetMotifMatchCigarP60782MF_01043148, CONCAT('^(?:[a-z]*(?:[A-Z]|-)){', STR(?step1158), '}'), '')))), '[^-]', ''))) AS ?step2159) . BIND(((?step2159 + ?targetMotifMatchRegionMatchBeginPositionMF_01043149) - 1) AS ?thisPositionOn38) . BIND(STRLEN(REPLACE(SUBSTR(?templateMotifCigarP60782MF_01043146, 1, (STRLEN(?templateMotifCigarP60782MF_01043146) - STRLEN(REPLACE(?templateMotifCigarP60782MF_01043146, CONCAT('^(?:-*[^-]){', STR(((73 - ?templateMotifSequenceMatchBeginPositionP60782147) + 1)), '}'), '')))), '[a-z]', '')) AS ?step1160) . BIND((STRLEN(SUBSTR(?targetMotifMatchCigarP60782MF_01043148, 1, (STRLEN(?targetMotifMatchCigarP60782MF_01043148) - STRLEN(REPLACE(?targetMotifMatchCigarP60782MF_01043148, CONCAT('^(?:[a-z]*(?:[A-Z]|-)){', STR(?step1160), '}'), ''))))) - STRLEN(REPLACE(SUBSTR(?targetMotifMatchCigarP60782MF_01043148, 1, (STRLEN(?targetMotifMatchCigarP60782MF_01043148) - STRLEN(REPLACE(?targetMotifMatchCigarP60782MF_01043148, CONCAT('^(?:[a-z]*(?:[A-Z]|-)){', STR(?step1160), '}'), '')))), '[^-]', ''))) AS ?step2161) . BIND(((?step2161 + ?targetMotifMatchRegionMatchBeginPositionMF_01043149) - 1) AS ?thisPositionOn39) . BIND(?this AS ?pfs1t162) . BIND(URI(CONCAT(STR(?thisSequence), '#position', STR(?thisPositionOn38))) AS ?pfsb36) . BIND(URI(CONCAT(STR(?thisSequence), '#position', STR(?thisPositionOn39))) AS ?pfse37) . FILTER ((BOUND(?thisPositionOn38) && BOUND(?thisPositionOn39))) . BIND(URI(CONCAT(STR(?this), '#MF_01043a35')) AS ?annotation35) . BIND(?this AS ?pfs34) . } OPTIONAL { ?this up:sequence ?thisSequence . ?thisSequence rdf:value ?thisSequenceValue . ?templateMotifMatch168 faldo:location ?templateMotifSequenceMatchRegionP60782169 ; edam:is_output_of ?templateMotifSequenceProfileAlignmentOperationP60782171 ; rdf:type edam:data_0869 ; rdf:value ?templateMotifCigarP60782MF_01043164 . ?templateMotifSequenceMatchRegionP60782169 faldo:begin ?templateMotifSequenceMatchBeginP60782170 . ?templateMotifSequenceMatchBeginP60782170 faldo:position ?templateMotifSequenceMatchBeginPositionP60782165 ; faldo:reference isoform:P60782-1 . ?templateMotifSequenceProfileAlignmentOperationP60782171 edam:has_input signature:MF_01043 ; rdf:type edam:operation_0300 . ?targetMotifMatch172 faldo:location ?targetMotifMatchRegionMatch173 ; edam:is_output_of ?targetMotifSequenceAlignmentOperationMF_01043175 ; rdf:type edam:data_0869 ; rdf:value ?targetMotifMatchCigarP60782MF_01043166 . ?targetMotifMatchRegionMatch173 faldo:begin ?targetMotifMatchRegionMatchBeginMF_01043174 . ?targetMotifMatchRegionMatchBeginMF_01043174 faldo:position ?targetMotifMatchRegionMatchBeginPositionMF_01043167 ; faldo:reference ?thisSequence . ?targetMotifSequenceAlignmentOperationMF_01043175 edam:has_input signature:MF_01043 ; rdf:type edam:operation_0300 . VALUES ?supertaxon163 {taxon:590 taxon:620 taxon:561} ?this up:organism ?thisOrganism . ?thisOrganism rdfs:subClassOf+ ?supertaxon163 . BIND(STRLEN(REPLACE(SUBSTR(?templateMotifCigarP60782MF_01043164, 1, (STRLEN(?templateMotifCigarP60782MF_01043164) - STRLEN(REPLACE(?templateMotifCigarP60782MF_01043164, CONCAT('^(?:-*[^-]){', STR(((74 - ?templateMotifSequenceMatchBeginPositionP60782165) + 1)), '}'), '')))), '[a-z]', '')) AS ?step1176) . BIND((STRLEN(SUBSTR(?targetMotifMatchCigarP60782MF_01043166, 1, (STRLEN(?targetMotifMatchCigarP60782MF_01043166) - STRLEN(REPLACE(?targetMotifMatchCigarP60782MF_01043166, CONCAT('^(?:[a-z]*(?:[A-Z]|-)){', STR(?step1176), '}'), ''))))) - STRLEN(REPLACE(SUBSTR(?targetMotifMatchCigarP60782MF_01043166, 1, (STRLEN(?targetMotifMatchCigarP60782MF_01043166) - STRLEN(REPLACE(?targetMotifMatchCigarP60782MF_01043166, CONCAT('^(?:[a-z]*(?:[A-Z]|-)){', STR(?step1176), '}'), '')))), '[^-]', ''))) AS ?step2177) . BIND(((?step2177 + ?targetMotifMatchRegionMatchBeginPositionMF_01043167) - 1) AS ?thisPositionOn44) . BIND(STRLEN(REPLACE(SUBSTR(?templateMotifCigarP60782MF_01043164, 1, (STRLEN(?templateMotifCigarP60782MF_01043164) - STRLEN(REPLACE(?templateMotifCigarP60782MF_01043164, CONCAT('^(?:-*[^-]){', STR(((80 - ?templateMotifSequenceMatchBeginPositionP60782165) + 1)), '}'), '')))), '[a-z]', '')) AS ?step1178) . BIND((STRLEN(SUBSTR(?targetMotifMatchCigarP60782MF_01043166, 1, (STRLEN(?targetMotifMatchCigarP60782MF_01043166) - STRLEN(REPLACE(?targetMotifMatchCigarP60782MF_01043166, CONCAT('^(?:[a-z]*(?:[A-Z]|-)){', STR(?step1178), '}'), ''))))) - STRLEN(REPLACE(SUBSTR(?targetMotifMatchCigarP60782MF_01043166, 1, (STRLEN(?targetMotifMatchCigarP60782MF_01043166) - STRLEN(REPLACE(?targetMotifMatchCigarP60782MF_01043166, CONCAT('^(?:[a-z]*(?:[A-Z]|-)){', STR(?step1178), '}'), '')))), '[^-]', ''))) AS ?step2179) . BIND(((?step2179 + ?targetMotifMatchRegionMatchBeginPositionMF_01043167) - 1) AS ?thisPositionOn45) . BIND(?this AS ?pfs1t180) . BIND(URI(CONCAT(STR(?thisSequence), '#position', STR(?thisPositionOn44))) AS ?pfsb42) . BIND(URI(CONCAT(STR(?thisSequence), '#position', STR(?thisPositionOn45))) AS ?pfse43) . FILTER ((BOUND(?thisPositionOn44) && BOUND(?thisPositionOn45))) . BIND(URI(CONCAT(STR(?this), '#MF_01043a41')) AS ?annotation41) . BIND(?this AS ?pfs40) . } OPTIONAL { ?this up:sequence ?thisSequence . ?thisSequence rdf:value ?thisSequenceValue . ?templateMotifMatch186 faldo:location ?templateMotifSequenceMatchRegionP60782187 ; edam:is_output_of ?templateMotifSequenceProfileAlignmentOperationP60782189 ; rdf:type edam:data_0869 ; rdf:value ?templateMotifCigarP60782MF_01043182 . ?templateMotifSequenceMatchRegionP60782187 faldo:begin ?templateMotifSequenceMatchBeginP60782188 . ?templateMotifSequenceMatchBeginP60782188 faldo:position ?templateMotifSequenceMatchBeginPositionP60782183 ; faldo:reference isoform:P60782-1 . ?templateMotifSequenceProfileAlignmentOperationP60782189 edam:has_input signature:MF_01043 ; rdf:type edam:operation_0300 . ?targetMotifMatch190 faldo:location ?targetMotifMatchRegionMatch191 ; edam:is_output_of ?targetMotifSequenceAlignmentOperationMF_01043193 ; rdf:type edam:data_0869 ; rdf:value ?targetMotifMatchCigarP60782MF_01043184 . ?targetMotifMatchRegionMatch191 faldo:begin ?targetMotifMatchRegionMatchBeginMF_01043192 . ?targetMotifMatchRegionMatchBeginMF_01043192 faldo:position ?targetMotifMatchRegionMatchBeginPositionMF_01043185 ; faldo:reference ?thisSequence . ?targetMotifSequenceAlignmentOperationMF_01043193 edam:has_input signature:MF_01043 ; rdf:type edam:operation_0300 . VALUES ?supertaxon181 {taxon:590 taxon:620 taxon:561} ?this up:organism ?thisOrganism . ?thisOrganism rdfs:subClassOf+ ?supertaxon181 . BIND(STRLEN(REPLACE(SUBSTR(?templateMotifCigarP60782MF_01043182, 1, (STRLEN(?templateMotifCigarP60782MF_01043182) - STRLEN(REPLACE(?templateMotifCigarP60782MF_01043182, CONCAT('^(?:-*[^-]){', STR(((81 - ?templateMotifSequenceMatchBeginPositionP60782183) + 1)), '}'), '')))), '[a-z]', '')) AS ?step1194) . BIND((STRLEN(SUBSTR(?targetMotifMatchCigarP60782MF_01043184, 1, (STRLEN(?targetMotifMatchCigarP60782MF_01043184) - STRLEN(REPLACE(?targetMotifMatchCigarP60782MF_01043184, CONCAT('^(?:[a-z]*(?:[A-Z]|-)){', STR(?step1194), '}'), ''))))) - STRLEN(REPLACE(SUBSTR(?targetMotifMatchCigarP60782MF_01043184, 1, (STRLEN(?targetMotifMatchCigarP60782MF_01043184) - STRLEN(REPLACE(?targetMotifMatchCigarP60782MF_01043184, CONCAT('^(?:[a-z]*(?:[A-Z]|-)){', STR(?step1194), '}'), '')))), '[^-]', ''))) AS ?step2195) . BIND(((?step2195 + ?targetMotifMatchRegionMatchBeginPositionMF_01043185) - 1) AS ?thisPositionOn50) . BIND(STRLEN(REPLACE(SUBSTR(?templateMotifCigarP60782MF_01043182, 1, (STRLEN(?templateMotifCigarP60782MF_01043182) - STRLEN(REPLACE(?templateMotifCigarP60782MF_01043182, CONCAT('^(?:-*[^-]){', STR(((101 - ?templateMotifSequenceMatchBeginPositionP60782183) + 1)), '}'), '')))), '[a-z]', '')) AS ?step1196) . BIND((STRLEN(SUBSTR(?targetMotifMatchCigarP60782MF_01043184, 1, (STRLEN(?targetMotifMatchCigarP60782MF_01043184) - STRLEN(REPLACE(?targetMotifMatchCigarP60782MF_01043184, CONCAT('^(?:[a-z]*(?:[A-Z]|-)){', STR(?step1196), '}'), ''))))) - STRLEN(REPLACE(SUBSTR(?targetMotifMatchCigarP60782MF_01043184, 1, (STRLEN(?targetMotifMatchCigarP60782MF_01043184) - STRLEN(REPLACE(?targetMotifMatchCigarP60782MF_01043184, CONCAT('^(?:[a-z]*(?:[A-Z]|-)){', STR(?step1196), '}'), '')))), '[^-]', ''))) AS ?step2197) . BIND(((?step2197 + ?targetMotifMatchRegionMatchBeginPositionMF_01043185) - 1) AS ?thisPositionOn51) . BIND(?this AS ?pfs1t198) . BIND(URI(CONCAT(STR(?thisSequence), '#position', STR(?thisPositionOn50))) AS ?pfsb48) . BIND(URI(CONCAT(STR(?thisSequence), '#position', STR(?thisPositionOn51))) AS ?pfse49) . FILTER ((BOUND(?thisPositionOn50) && BOUND(?thisPositionOn51))) . BIND(URI(CONCAT(STR(?this), '#MF_01043a47')) AS ?annotation47) . BIND(?this AS ?pfs46) . } OPTIONAL { ?this up:sequence ?thisSequence . ?thisSequence rdf:value ?thisSequenceValue . ?templateMotifMatch204 faldo:location ?templateMotifSequenceMatchRegionP60782205 ; edam:is_output_of ?templateMotifSequenceProfileAlignmentOperationP60782207 ; rdf:type edam:data_0869 ; rdf:value ?templateMotifCigarP60782MF_01043200 . ?templateMotifSequenceMatchRegionP60782205 faldo:begin ?templateMotifSequenceMatchBeginP60782206 . ?templateMotifSequenceMatchBeginP60782206 faldo:position ?templateMotifSequenceMatchBeginPositionP60782201 ; faldo:reference isoform:P60782-1 . ?templateMotifSequenceProfileAlignmentOperationP60782207 edam:has_input signature:MF_01043 ; rdf:type edam:operation_0300 . ?targetMotifMatch208 faldo:location ?targetMotifMatchRegionMatch209 ; edam:is_output_of ?targetMotifSequenceAlignmentOperationMF_01043211 ; rdf:type edam:data_0869 ; rdf:value ?targetMotifMatchCigarP60782MF_01043202 . ?targetMotifMatchRegionMatch209 faldo:begin ?targetMotifMatchRegionMatchBeginMF_01043210 . ?targetMotifMatchRegionMatchBeginMF_01043210 faldo:position ?targetMotifMatchRegionMatchBeginPositionMF_01043203 ; faldo:reference ?thisSequence . ?targetMotifSequenceAlignmentOperationMF_01043211 edam:has_input signature:MF_01043 ; rdf:type edam:operation_0300 . VALUES ?supertaxon199 {taxon:590 taxon:620 taxon:561} ?this up:organism ?thisOrganism . ?thisOrganism rdfs:subClassOf+ ?supertaxon199 . BIND(STRLEN(REPLACE(SUBSTR(?templateMotifCigarP60782MF_01043200, 1, (STRLEN(?templateMotifCigarP60782MF_01043200) - STRLEN(REPLACE(?templateMotifCigarP60782MF_01043200, CONCAT('^(?:-*[^-]){', STR(((102 - ?templateMotifSequenceMatchBeginPositionP60782201) + 1)), '}'), '')))), '[a-z]', '')) AS ?step1212) . BIND((STRLEN(SUBSTR(?targetMotifMatchCigarP60782MF_01043202, 1, (STRLEN(?targetMotifMatchCigarP60782MF_01043202) - STRLEN(REPLACE(?targetMotifMatchCigarP60782MF_01043202, CONCAT('^(?:[a-z]*(?:[A-Z]|-)){', STR(?step1212), '}'), ''))))) - STRLEN(REPLACE(SUBSTR(?targetMotifMatchCigarP60782MF_01043202, 1, (STRLEN(?targetMotifMatchCigarP60782MF_01043202) - STRLEN(REPLACE(?targetMotifMatchCigarP60782MF_01043202, CONCAT('^(?:[a-z]*(?:[A-Z]|-)){', STR(?step1212), '}'), '')))), '[^-]', ''))) AS ?step2213) . BIND(((?step2213 + ?targetMotifMatchRegionMatchBeginPositionMF_01043203) - 1) AS ?thisPositionOn56) . BIND(STRLEN(REPLACE(SUBSTR(?templateMotifCigarP60782MF_01043200, 1, (STRLEN(?templateMotifCigarP60782MF_01043200) - STRLEN(REPLACE(?templateMotifCigarP60782MF_01043200, CONCAT('^(?:-*[^-]){', STR(((111 - ?templateMotifSequenceMatchBeginPositionP60782201) + 1)), '}'), '')))), '[a-z]', '')) AS ?step1214) . BIND((STRLEN(SUBSTR(?targetMotifMatchCigarP60782MF_01043202, 1, (STRLEN(?targetMotifMatchCigarP60782MF_01043202) - STRLEN(REPLACE(?targetMotifMatchCigarP60782MF_01043202, CONCAT('^(?:[a-z]*(?:[A-Z]|-)){', STR(?step1214), '}'), ''))))) - STRLEN(REPLACE(SUBSTR(?targetMotifMatchCigarP60782MF_01043202, 1, (STRLEN(?targetMotifMatchCigarP60782MF_01043202) - STRLEN(REPLACE(?targetMotifMatchCigarP60782MF_01043202, CONCAT('^(?:[a-z]*(?:[A-Z]|-)){', STR(?step1214), '}'), '')))), '[^-]', ''))) AS ?step2215) . BIND(((?step2215 + ?targetMotifMatchRegionMatchBeginPositionMF_01043203) - 1) AS ?thisPositionOn57) . BIND(?this AS ?pfs1t216) . BIND(URI(CONCAT(STR(?thisSequence), '#position', STR(?thisPositionOn56))) AS ?pfsb54) . BIND(URI(CONCAT(STR(?thisSequence), '#position', STR(?thisPositionOn57))) AS ?pfse55) . FILTER ((BOUND(?thisPositionOn56) && BOUND(?thisPositionOn57))) . BIND(URI(CONCAT(STR(?this), '#MF_01043a53')) AS ?annotation53) . BIND(?this AS ?pfs52) . } OPTIONAL { ?this up:sequence ?thisSequence . ?thisSequence rdf:value ?thisSequenceValue . ?templateMotifMatch222 faldo:location ?templateMotifSequenceMatchRegionP60782223 ; edam:is_output_of ?templateMotifSequenceProfileAlignmentOperationP60782225 ; rdf:type edam:data_0869 ; rdf:value ?templateMotifCigarP60782MF_01043218 . ?templateMotifSequenceMatchRegionP60782223 faldo:begin ?templateMotifSequenceMatchBeginP60782224 . ?templateMotifSequenceMatchBeginP60782224 faldo:position ?templateMotifSequenceMatchBeginPositionP60782219 ; faldo:reference isoform:P60782-1 . ?templateMotifSequenceProfileAlignmentOperationP60782225 edam:has_input signature:MF_01043 ; rdf:type edam:operation_0300 . ?targetMotifMatch226 faldo:location ?targetMotifMatchRegionMatch227 ; edam:is_output_of ?targetMotifSequenceAlignmentOperationMF_01043229 ; rdf:type edam:data_0869 ; rdf:value ?targetMotifMatchCigarP60782MF_01043220 . ?targetMotifMatchRegionMatch227 faldo:begin ?targetMotifMatchRegionMatchBeginMF_01043228 . ?targetMotifMatchRegionMatchBeginMF_01043228 faldo:position ?targetMotifMatchRegionMatchBeginPositionMF_01043221 ; faldo:reference ?thisSequence . ?targetMotifSequenceAlignmentOperationMF_01043229 edam:has_input signature:MF_01043 ; rdf:type edam:operation_0300 . VALUES ?supertaxon217 {taxon:590 taxon:620 taxon:561} ?this up:organism ?thisOrganism . ?thisOrganism rdfs:subClassOf+ ?supertaxon217 . BIND(STRLEN(REPLACE(SUBSTR(?templateMotifCigarP60782MF_01043218, 1, (STRLEN(?templateMotifCigarP60782MF_01043218) - STRLEN(REPLACE(?templateMotifCigarP60782MF_01043218, CONCAT('^(?:-*[^-]){', STR(((112 - ?templateMotifSequenceMatchBeginPositionP60782219) + 1)), '}'), '')))), '[a-z]', '')) AS ?step1230) . BIND((STRLEN(SUBSTR(?targetMotifMatchCigarP60782MF_01043220, 1, (STRLEN(?targetMotifMatchCigarP60782MF_01043220) - STRLEN(REPLACE(?targetMotifMatchCigarP60782MF_01043220, CONCAT('^(?:[a-z]*(?:[A-Z]|-)){', STR(?step1230), '}'), ''))))) - STRLEN(REPLACE(SUBSTR(?targetMotifMatchCigarP60782MF_01043220, 1, (STRLEN(?targetMotifMatchCigarP60782MF_01043220) - STRLEN(REPLACE(?targetMotifMatchCigarP60782MF_01043220, CONCAT('^(?:[a-z]*(?:[A-Z]|-)){', STR(?step1230), '}'), '')))), '[^-]', ''))) AS ?step2231) . BIND(((?step2231 + ?targetMotifMatchRegionMatchBeginPositionMF_01043221) - 1) AS ?thisPositionOn62) . BIND(STRLEN(REPLACE(SUBSTR(?templateMotifCigarP60782MF_01043218, 1, (STRLEN(?templateMotifCigarP60782MF_01043218) - STRLEN(REPLACE(?templateMotifCigarP60782MF_01043218, CONCAT('^(?:-*[^-]){', STR(((132 - ?templateMotifSequenceMatchBeginPositionP60782219) + 1)), '}'), '')))), '[a-z]', '')) AS ?step1232) . BIND((STRLEN(SUBSTR(?targetMotifMatchCigarP60782MF_01043220, 1, (STRLEN(?targetMotifMatchCigarP60782MF_01043220) - STRLEN(REPLACE(?targetMotifMatchCigarP60782MF_01043220, CONCAT('^(?:[a-z]*(?:[A-Z]|-)){', STR(?step1232), '}'), ''))))) - STRLEN(REPLACE(SUBSTR(?targetMotifMatchCigarP60782MF_01043220, 1, (STRLEN(?targetMotifMatchCigarP60782MF_01043220) - STRLEN(REPLACE(?targetMotifMatchCigarP60782MF_01043220, CONCAT('^(?:[a-z]*(?:[A-Z]|-)){', STR(?step1232), '}'), '')))), '[^-]', ''))) AS ?step2233) . BIND(((?step2233 + ?targetMotifMatchRegionMatchBeginPositionMF_01043221) - 1) AS ?thisPositionOn63) . BIND(?this AS ?pfs1t234) . BIND(URI(CONCAT(STR(?thisSequence), '#position', STR(?thisPositionOn62))) AS ?pfsb60) . BIND(URI(CONCAT(STR(?thisSequence), '#position', STR(?thisPositionOn63))) AS ?pfse61) . FILTER ((BOUND(?thisPositionOn62) && BOUND(?thisPositionOn63))) . BIND(URI(CONCAT(STR(?this), '#MF_01043a59')) AS ?annotation59) . BIND(?this AS ?pfs58) . } OPTIONAL { ?this up:sequence ?thisSequence . ?thisSequence rdf:value ?thisSequenceValue . ?templateMotifMatch240 faldo:location ?templateMotifSequenceMatchRegionP60782241 ; edam:is_output_of ?templateMotifSequenceProfileAlignmentOperationP60782243 ; rdf:type edam:data_0869 ; rdf:value ?templateMotifCigarP60782MF_01043236 . ?templateMotifSequenceMatchRegionP60782241 faldo:begin ?templateMotifSequenceMatchBeginP60782242 . ?templateMotifSequenceMatchBeginP60782242 faldo:position ?templateMotifSequenceMatchBeginPositionP60782237 ; faldo:reference isoform:P60782-1 . ?templateMotifSequenceProfileAlignmentOperationP60782243 edam:has_input signature:MF_01043 ; rdf:type edam:operation_0300 . ?targetMotifMatch244 faldo:location ?targetMotifMatchRegionMatch245 ; edam:is_output_of ?targetMotifSequenceAlignmentOperationMF_01043247 ; rdf:type edam:data_0869 ; rdf:value ?targetMotifMatchCigarP60782MF_01043238 . ?targetMotifMatchRegionMatch245 faldo:begin ?targetMotifMatchRegionMatchBeginMF_01043246 . ?targetMotifMatchRegionMatchBeginMF_01043246 faldo:position ?targetMotifMatchRegionMatchBeginPositionMF_01043239 ; faldo:reference ?thisSequence . ?targetMotifSequenceAlignmentOperationMF_01043247 edam:has_input signature:MF_01043 ; rdf:type edam:operation_0300 . VALUES ?supertaxon235 {taxon:590 taxon:620 taxon:561} ?this up:organism ?thisOrganism . ?thisOrganism rdfs:subClassOf+ ?supertaxon235 . BIND(STRLEN(REPLACE(SUBSTR(?templateMotifCigarP60782MF_01043236, 1, (STRLEN(?templateMotifCigarP60782MF_01043236) - STRLEN(REPLACE(?templateMotifCigarP60782MF_01043236, CONCAT('^(?:-*[^-]){', STR(((133 - ?templateMotifSequenceMatchBeginPositionP60782237) + 1)), '}'), '')))), '[a-z]', '')) AS ?step1248) . BIND((STRLEN(SUBSTR(?targetMotifMatchCigarP60782MF_01043238, 1, (STRLEN(?targetMotifMatchCigarP60782MF_01043238) - STRLEN(REPLACE(?targetMotifMatchCigarP60782MF_01043238, CONCAT('^(?:[a-z]*(?:[A-Z]|-)){', STR(?step1248), '}'), ''))))) - STRLEN(REPLACE(SUBSTR(?targetMotifMatchCigarP60782MF_01043238, 1, (STRLEN(?targetMotifMatchCigarP60782MF_01043238) - STRLEN(REPLACE(?targetMotifMatchCigarP60782MF_01043238, CONCAT('^(?:[a-z]*(?:[A-Z]|-)){', STR(?step1248), '}'), '')))), '[^-]', ''))) AS ?step2249) . BIND(((?step2249 + ?targetMotifMatchRegionMatchBeginPositionMF_01043239) - 1) AS ?thisPositionOn68) . BIND(STRLEN(REPLACE(SUBSTR(?templateMotifCigarP60782MF_01043236, 1, (STRLEN(?templateMotifCigarP60782MF_01043236) - STRLEN(REPLACE(?templateMotifCigarP60782MF_01043236, CONCAT('^(?:-*[^-]){', STR(((137 - ?templateMotifSequenceMatchBeginPositionP60782237) + 1)), '}'), '')))), '[a-z]', '')) AS ?step1250) . BIND((STRLEN(SUBSTR(?targetMotifMatchCigarP60782MF_01043238, 1, (STRLEN(?targetMotifMatchCigarP60782MF_01043238) - STRLEN(REPLACE(?targetMotifMatchCigarP60782MF_01043238, CONCAT('^(?:[a-z]*(?:[A-Z]|-)){', STR(?step1250), '}'), ''))))) - STRLEN(REPLACE(SUBSTR(?targetMotifMatchCigarP60782MF_01043238, 1, (STRLEN(?targetMotifMatchCigarP60782MF_01043238) - STRLEN(REPLACE(?targetMotifMatchCigarP60782MF_01043238, CONCAT('^(?:[a-z]*(?:[A-Z]|-)){', STR(?step1250), '}'), '')))), '[^-]', ''))) AS ?step2251) . BIND(((?step2251 + ?targetMotifMatchRegionMatchBeginPositionMF_01043239) - 1) AS ?thisPositionOn69) . BIND(?this AS ?pfs1t252) . BIND(URI(CONCAT(STR(?thisSequence), '#position', STR(?thisPositionOn68))) AS ?pfsb66) . BIND(URI(CONCAT(STR(?thisSequence), '#position', STR(?thisPositionOn69))) AS ?pfse67) . FILTER ((BOUND(?thisPositionOn68) && BOUND(?thisPositionOn69))) . BIND(URI(CONCAT(STR(?this), '#MF_01043a65')) AS ?annotation65) . BIND(?this AS ?pfs64) . } OPTIONAL { ?this up:sequence ?thisSequence . ?thisSequence rdf:value ?thisSequenceValue . ?templateMotifMatch258 faldo:location ?templateMotifSequenceMatchRegionP60782259 ; edam:is_output_of ?templateMotifSequenceProfileAlignmentOperationP60782261 ; rdf:type edam:data_0869 ; rdf:value ?templateMotifCigarP60782MF_01043254 . ?templateMotifSequenceMatchRegionP60782259 faldo:begin ?templateMotifSequenceMatchBeginP60782260 . ?templateMotifSequenceMatchBeginP60782260 faldo:position ?templateMotifSequenceMatchBeginPositionP60782255 ; faldo:reference isoform:P60782-1 . ?templateMotifSequenceProfileAlignmentOperationP60782261 edam:has_input signature:MF_01043 ; rdf:type edam:operation_0300 . ?targetMotifMatch262 faldo:location ?targetMotifMatchRegionMatch263 ; edam:is_output_of ?targetMotifSequenceAlignmentOperationMF_01043265 ; rdf:type edam:data_0869 ; rdf:value ?targetMotifMatchCigarP60782MF_01043256 . ?targetMotifMatchRegionMatch263 faldo:begin ?targetMotifMatchRegionMatchBeginMF_01043264 . ?targetMotifMatchRegionMatchBeginMF_01043264 faldo:position ?targetMotifMatchRegionMatchBeginPositionMF_01043257 ; faldo:reference ?thisSequence . ?targetMotifSequenceAlignmentOperationMF_01043265 edam:has_input signature:MF_01043 ; rdf:type edam:operation_0300 . VALUES ?supertaxon253 {taxon:590 taxon:620 taxon:561} ?this up:organism ?thisOrganism . ?thisOrganism rdfs:subClassOf+ ?supertaxon253 . BIND(STRLEN(REPLACE(SUBSTR(?templateMotifCigarP60782MF_01043254, 1, (STRLEN(?templateMotifCigarP60782MF_01043254) - STRLEN(REPLACE(?templateMotifCigarP60782MF_01043254, CONCAT('^(?:-*[^-]){', STR(((138 - ?templateMotifSequenceMatchBeginPositionP60782255) + 1)), '}'), '')))), '[a-z]', '')) AS ?step1266) . BIND((STRLEN(SUBSTR(?targetMotifMatchCigarP60782MF_01043256, 1, (STRLEN(?targetMotifMatchCigarP60782MF_01043256) - STRLEN(REPLACE(?targetMotifMatchCigarP60782MF_01043256, CONCAT('^(?:[a-z]*(?:[A-Z]|-)){', STR(?step1266), '}'), ''))))) - STRLEN(REPLACE(SUBSTR(?targetMotifMatchCigarP60782MF_01043256, 1, (STRLEN(?targetMotifMatchCigarP60782MF_01043256) - STRLEN(REPLACE(?targetMotifMatchCigarP60782MF_01043256, CONCAT('^(?:[a-z]*(?:[A-Z]|-)){', STR(?step1266), '}'), '')))), '[^-]', ''))) AS ?step2267) . BIND(((?step2267 + ?targetMotifMatchRegionMatchBeginPositionMF_01043257) - 1) AS ?thisPositionOn74) . BIND(STRLEN(REPLACE(SUBSTR(?templateMotifCigarP60782MF_01043254, 1, (STRLEN(?templateMotifCigarP60782MF_01043254) - STRLEN(REPLACE(?templateMotifCigarP60782MF_01043254, CONCAT('^(?:-*[^-]){', STR(((158 - ?templateMotifSequenceMatchBeginPositionP60782255) + 1)), '}'), '')))), '[a-z]', '')) AS ?step1268) . BIND((STRLEN(SUBSTR(?targetMotifMatchCigarP60782MF_01043256, 1, (STRLEN(?targetMotifMatchCigarP60782MF_01043256) - STRLEN(REPLACE(?targetMotifMatchCigarP60782MF_01043256, CONCAT('^(?:[a-z]*(?:[A-Z]|-)){', STR(?step1268), '}'), ''))))) - STRLEN(REPLACE(SUBSTR(?targetMotifMatchCigarP60782MF_01043256, 1, (STRLEN(?targetMotifMatchCigarP60782MF_01043256) - STRLEN(REPLACE(?targetMotifMatchCigarP60782MF_01043256, CONCAT('^(?:[a-z]*(?:[A-Z]|-)){', STR(?step1268), '}'), '')))), '[^-]', ''))) AS ?step2269) . BIND(((?step2269 + ?targetMotifMatchRegionMatchBeginPositionMF_01043257) - 1) AS ?thisPositionOn75) . BIND(?this AS ?pfs1t270) . BIND(URI(CONCAT(STR(?thisSequence), '#position', STR(?thisPositionOn74))) AS ?pfsb72) . BIND(URI(CONCAT(STR(?thisSequence), '#position', STR(?thisPositionOn75))) AS ?pfse73) . FILTER ((BOUND(?thisPositionOn74) && BOUND(?thisPositionOn75))) . BIND(URI(CONCAT(STR(?this), '#MF_01043a71')) AS ?annotation71) . BIND(?this AS ?pfs70) . } OPTIONAL { ?this up:sequence ?thisSequence . ?thisSequence rdf:value ?thisSequenceValue . ?templateMotifMatch276 faldo:location ?templateMotifSequenceMatchRegionP60782277 ; edam:is_output_of ?templateMotifSequenceProfileAlignmentOperationP60782279 ; rdf:type edam:data_0869 ; rdf:value ?templateMotifCigarP60782MF_01043272 . ?templateMotifSequenceMatchRegionP60782277 faldo:begin ?templateMotifSequenceMatchBeginP60782278 . ?templateMotifSequenceMatchBeginP60782278 faldo:position ?templateMotifSequenceMatchBeginPositionP60782273 ; faldo:reference isoform:P60782-1 . ?templateMotifSequenceProfileAlignmentOperationP60782279 edam:has_input signature:MF_01043 ; rdf:type edam:operation_0300 . ?targetMotifMatch280 faldo:location ?targetMotifMatchRegionMatch281 ; edam:is_output_of ?targetMotifSequenceAlignmentOperationMF_01043283 ; rdf:type edam:data_0869 ; rdf:value ?targetMotifMatchCigarP60782MF_01043274 . ?targetMotifMatchRegionMatch281 faldo:begin ?targetMotifMatchRegionMatchBeginMF_01043282 . ?targetMotifMatchRegionMatchBeginMF_01043282 faldo:position ?targetMotifMatchRegionMatchBeginPositionMF_01043275 ; faldo:reference ?thisSequence . ?targetMotifSequenceAlignmentOperationMF_01043283 edam:has_input signature:MF_01043 ; rdf:type edam:operation_0300 . VALUES ?supertaxon271 {taxon:590 taxon:620 taxon:561} ?this up:organism ?thisOrganism . ?thisOrganism rdfs:subClassOf+ ?supertaxon271 . BIND(STRLEN(REPLACE(SUBSTR(?templateMotifCigarP60782MF_01043272, 1, (STRLEN(?templateMotifCigarP60782MF_01043272) - STRLEN(REPLACE(?templateMotifCigarP60782MF_01043272, CONCAT('^(?:-*[^-]){', STR(((159 - ?templateMotifSequenceMatchBeginPositionP60782273) + 1)), '}'), '')))), '[a-z]', '')) AS ?step1284) . BIND((STRLEN(SUBSTR(?targetMotifMatchCigarP60782MF_01043274, 1, (STRLEN(?targetMotifMatchCigarP60782MF_01043274) - STRLEN(REPLACE(?targetMotifMatchCigarP60782MF_01043274, CONCAT('^(?:[a-z]*(?:[A-Z]|-)){', STR(?step1284), '}'), ''))))) - STRLEN(REPLACE(SUBSTR(?targetMotifMatchCigarP60782MF_01043274, 1, (STRLEN(?targetMotifMatchCigarP60782MF_01043274) - STRLEN(REPLACE(?targetMotifMatchCigarP60782MF_01043274, CONCAT('^(?:[a-z]*(?:[A-Z]|-)){', STR(?step1284), '}'), '')))), '[^-]', ''))) AS ?step2285) . BIND(((?step2285 + ?targetMotifMatchRegionMatchBeginPositionMF_01043275) - 1) AS ?thisPositionOn80) . BIND(STRLEN(REPLACE(SUBSTR(?templateMotifCigarP60782MF_01043272, 1, (STRLEN(?templateMotifCigarP60782MF_01043272) - STRLEN(REPLACE(?templateMotifCigarP60782MF_01043272, CONCAT('^(?:-*[^-]){', STR(((205 - ?templateMotifSequenceMatchBeginPositionP60782273) + 1)), '}'), '')))), '[a-z]', '')) AS ?step1286) . BIND((STRLEN(SUBSTR(?targetMotifMatchCigarP60782MF_01043274, 1, (STRLEN(?targetMotifMatchCigarP60782MF_01043274) - STRLEN(REPLACE(?targetMotifMatchCigarP60782MF_01043274, CONCAT('^(?:[a-z]*(?:[A-Z]|-)){', STR(?step1286), '}'), ''))))) - STRLEN(REPLACE(SUBSTR(?targetMotifMatchCigarP60782MF_01043274, 1, (STRLEN(?targetMotifMatchCigarP60782MF_01043274) - STRLEN(REPLACE(?targetMotifMatchCigarP60782MF_01043274, CONCAT('^(?:[a-z]*(?:[A-Z]|-)){', STR(?step1286), '}'), '')))), '[^-]', ''))) AS ?step2287) . BIND(((?step2287 + ?targetMotifMatchRegionMatchBeginPositionMF_01043275) - 1) AS ?thisPositionOn81) . BIND(?this AS ?pfs1t288) . BIND(URI(CONCAT(STR(?thisSequence), '#position', STR(?thisPositionOn80))) AS ?pfsb78) . BIND(URI(CONCAT(STR(?thisSequence), '#position', STR(?thisPositionOn81))) AS ?pfse79) . FILTER ((BOUND(?thisPositionOn80) && BOUND(?thisPositionOn81))) . BIND(URI(CONCAT(STR(?this), '#MF_01043a77')) AS ?annotation77) . BIND(?this AS ?pfs76) . } OPTIONAL { ?this a up:Protein . { ?this up:proteome <http://purl.uniprot.org/proteomes/Membrane#2>. } UNION { ?this up:proteome ?p289 . ?p289 skos:narrower <http://purl.uniprot.org/proteomes/Membrane#2>. } BIND(?this AS ?case4) . } OPTIONAL { ?this a up:Protein . { FILTER (! (EXISTS { { ?this up:proteome <http://purl.uniprot.org/proteomes/Membrane#any>. } UNION { ?this up:proteome ?p290 . ?p290 skos:narrower <http://purl.uniprot.org/proteomes/Membrane#any>. } })) . } UNION { { ?this up:proteome <http://purl.uniprot.org/proteomes/Membrane#1>. } UNION { ?this up:proteome ?p291 . ?p291 skos:narrower <http://purl.uniprot.org/proteomes/Membrane#1>. } } BIND(?this AS ?case5) . } OPTIONAL { ?this a up:Protein . VALUES ?supertaxon292 {taxon:561 taxon:620 taxon:590} ?this up:organism ?thisOrganism . ?thisOrganism rdfs:subClassOf+ ?supertaxon292 . BIND(?this AS ?case6) . BIND(URI(CONCAT(STR(?this), '#MF_01043a7')) AS ?name7) . BIND(URI(CONCAT(STR(?this), '#MF_01043a8')) AS ?name8) . BIND(URI(CONCAT(STR(?this), '#MF_01043a9')) AS ?name9) . } OPTIONAL { ?this a up:Protein . ?this up:organism ?thisOrganism . FILTER (! (EXISTS { VALUES ?supertaxon293 {taxon:561 taxon:620 taxon:590} ?thisOrganism rdfs:subClassOf+ ?supertaxon293 . })) . BIND(?this AS ?case10) . BIND(URI(CONCAT(STR(?this), '#MF_01043a11')) AS ?name11) . BIND(URI(CONCAT(STR(?this), '#MF_01043a12')) AS ?name12) . BIND(URI(CONCAT(STR(?this), '#MF_01043a13')) AS ?name13) . BIND(URI(CONCAT(STR(?this), '#MF_01043a14')) AS ?name14) . BIND(URI(CONCAT(STR(?this), '#MF_01043a15')) AS ?name15) . } OPTIONAL { ?this up:annotation ?samtransmembrane294 ; up:sequence ?thisSequence . ?samtransmembrane294 up:range ?samtransmembraner295 ; rdf:type up:Transmembrane_Annotation . ?samtransmembraner295 faldo:begin ?samtransmembraneb296 ; faldo:end ?samtransmembranee297 . ?samtransmembraneb296 faldo:position ?samtransmembranebp298 ; faldo:reference ?thisSequence . ?samtransmembranee297 faldo:position ?samtransmembraneep299 ; faldo:reference ?thisSequence . BIND(?this AS ?sam82) . } BIND(URI(CONCAT(STR(?this), '#MF_01043a88')) AS ?keyword88) . BIND(URI(CONCAT(STR(?this), '#MF_01043a89')) AS ?keyword89) . BIND(URI(CONCAT(STR(?this), '#MF_01043a90')) AS ?keyword90) . }