@prefix rdf: <http://www.w3.org/1999/02/22-rdf-syntax-ns#> .
@prefix rdfs: <http://www.w3.org/2000/01/rdf-schema#> .
@prefix rdf4j: <http://rdf4j.org/schema/rdf4j#> .
@prefix sesame: <http://www.openrdf.org/schema/sesame#> .
@prefix owl: <http://www.w3.org/2002/07/owl#> .
@prefix xsd: <http://www.w3.org/2001/XMLSchema#> .
@prefix fn: <http://www.w3.org/2005/xpath-functions#> .

<http://purl.uniprot.org/unirules/MF_01085#construct> a <http://www.w3.org/ns/shacl#SPARQLRule>,
    <http://spinrdf.org/sp#Construct>;
  <https://hamap.expasy.org/rdf/vocab#addsTriple> <http://purl.uniprot.org/unirules/MF_01085#construct-template-1>,
    <http://purl.uniprot.org/unirules/MF_01085#construct-template-8>, <http://purl.uniprot.org/unirules/MF_01085#construct-template-22>,
    <http://purl.uniprot.org/unirules/MF_01085#construct-template-3>, <http://purl.uniprot.org/unirules/MF_01085#construct-template-4>,
    <http://purl.uniprot.org/unirules/MF_01085#construct-template-10>, <http://purl.uniprot.org/unirules/MF_01085#construct-template-11>,
    <http://purl.uniprot.org/unirules/MF_01085#construct-template-12>, <http://purl.uniprot.org/unirules/MF_01085#construct-template-18>,
    <http://purl.uniprot.org/unirules/MF_01085#construct-template-33>, <http://purl.uniprot.org/unirules/MF_01085#construct-template-13>,
    <http://purl.uniprot.org/unirules/MF_01085#construct-template-5>, <http://purl.uniprot.org/unirules/MF_01085#construct-template-24>,
    <http://purl.uniprot.org/unirules/MF_01085#construct-template-23>, <http://purl.uniprot.org/unirules/MF_01085#construct-template-21>,
    <http://purl.uniprot.org/unirules/MF_01085#construct-template-27>, <http://purl.uniprot.org/unirules/MF_01085#construct-template-32>,
    <http://purl.uniprot.org/unirules/MF_01085#construct-template-17>, <http://purl.uniprot.org/unirules/MF_01085#construct-template-29>,
    <http://purl.uniprot.org/unirules/MF_01085#construct-template-2>, <http://purl.uniprot.org/unirules/MF_01085#construct-template-20>,
    <http://purl.uniprot.org/unirules/MF_01085#construct-template-15>, <http://purl.uniprot.org/unirules/MF_01085#construct-template-16>,
    <http://purl.uniprot.org/unirules/MF_01085#construct-template-14>, <http://purl.uniprot.org/unirules/MF_01085#construct-template-31>,
    <http://purl.uniprot.org/unirules/MF_01085#construct-template-28>, <http://purl.uniprot.org/unirules/MF_01085#construct-template-25>,
    <http://purl.uniprot.org/unirules/MF_01085#construct-template-26>, <http://purl.uniprot.org/unirules/MF_01085#construct-template-0>,
    <http://purl.uniprot.org/unirules/MF_01085#construct-template-9>, <http://purl.uniprot.org/unirules/MF_01085#construct-template-19>,
    <http://purl.uniprot.org/unirules/MF_01085#construct-template-6>, <http://purl.uniprot.org/unirules/MF_01085#construct-template-37>,
    <http://purl.uniprot.org/unirules/MF_01085#construct-template-30>, <http://purl.uniprot.org/unirules/MF_01085#construct-template-35>,
    <http://purl.uniprot.org/unirules/MF_01085#construct-template-7>, <http://purl.uniprot.org/unirules/MF_01085#construct-template-34>,
    <http://purl.uniprot.org/unirules/MF_01085#construct-template-38>, <http://purl.uniprot.org/unirules/MF_01085#construct-template-36>;
  <http://www.w3.org/ns/shacl#prefixes> <http://purl.uniprot.org/unirules/>;
  <http://spinrdf.org/sp#where> <http://purl.uniprot.org/unirules/MF_01085#construct-where-list-0>;
  <http://spinrdf.org/sp#templates> <http://purl.uniprot.org/unirules/MF_01085#construct-template-list-0>;
  <http://www.w3.org/ns/shacl#construct> """CONSTRUCT {
  _:377821 up:source unirule:MF_01085 .
  _:377822 up:source unirule:MF_01085 .
  _:377823 up:source unirule:MF_01085 .
  _:377824 up:source unirule:MF_01085 .
  _:377825 up:source unirule:MF_01085 .
  _:377826 up:source unirule:MF_01085 .
  _:377827 up:source unirule:MF_01085 .
  _:377828 up:source unirule:MF_01085 .
  _:377829 up:source unirule:MF_01085 .
  _:377830 up:source unirule:MF_01085 .
  ?this up:annotation ?annotation0 ;
    up:classifiedWith GO:0005886 ,
      keyword:1003 ,
      keyword:1133 ,
      keyword:472 ,
      keyword:812 .
  ?annotation0 a up:Similarity_Annotation ;
    rdfs:comment 'Belongs to the UPF0283 family.' .
  ?case1 up:classifiedWith keyword:997 .
  ?sam5 up:classifiedWith keyword:1133 ,
      keyword:472 ,
      keyword:812 .
  ?transmembrane6 faldo:begin ?transmembraneb7 ;
    faldo:end ?transmembranee8 .
  ?transmembraneb7 faldo:position ?transmembranebp9 .
  ?transmembranee8 faldo:position ?transmembraneep10 .
  ?keyword11 up:range ?transmembrane6 .
  ?keyword12 up:range ?transmembrane6 .
  ?keyword13 up:range ?transmembrane6 .
  _:377831 a rdf:Statement ;
    up:attribution _:377821 ;
    rdf:subject ?this ;
    rdf:predicate up:annotation ;
    rdf:object ?annotation0 .
  _:377832 a rdf:Statement ;
    up:attribution _:377822 ;
    rdf:subject ?this ;
    rdf:predicate up:classifiedWith ;
    rdf:object keyword:1003 .
  _:377833 a rdf:Statement ;
    up:attribution _:377823 ;
    rdf:subject ?this ;
    rdf:predicate up:classifiedWith ;
    rdf:object keyword:472 .
  _:377834 a rdf:Statement ;
    up:attribution _:377824 ;
    rdf:subject ?this ;
    rdf:predicate up:classifiedWith ;
    rdf:object keyword:812 .
  _:377835 a rdf:Statement ;
    up:attribution _:377825 ;
    rdf:subject ?this ;
    rdf:predicate up:classifiedWith ;
    rdf:object keyword:1133 .
  _:377836 a rdf:Statement ;
    up:attribution _:377826 ;
    rdf:subject ?this ;
    rdf:predicate up:classifiedWith ;
    rdf:object GO:0005886 .
  _:377837 a rdf:Statement ;
    up:attribution _:377827 ;
    rdf:subject ?case1 ;
    rdf:predicate up:classifiedWith ;
    rdf:object keyword:997 .
  _:377838 a rdf:Statement ;
    up:attribution _:377828 ;
    rdf:subject ?sam5 ;
    rdf:predicate up:classifiedWith ;
    rdf:object keyword:472 .
  _:377839 a rdf:Statement ;
    up:attribution _:377829 ;
    rdf:subject ?sam5 ;
    rdf:predicate up:classifiedWith ;
    rdf:object keyword:812 .
  _:377840 a rdf:Statement ;
    up:attribution _:377830 ;
    rdf:subject ?sam5 ;
    rdf:predicate up:classifiedWith ;
    rdf:object keyword:1133 .
}
WHERE {
  #baseURI: http://purl.uniprot.org/unirule/MF_01085
  #Rule MF_01085 Created by:? on:2005-02-28 Modified by:Edouard de Castro on:2023-06-01
  ?this up:organism ?thisOrganism ;
    rdfs:seeAlso signature:MF_01085 .
  ?thisOrganism rdfs:subClassOf+ taxon:1224 .
  BIND(URI(CONCAT(STR(?this), '#MF_01085a0')) AS ?annotation0) .
  OPTIONAL {
    ?this a up:Protein .
    {
      ?this up:proteome <http://purl.uniprot.org/proteomes/Membrane#2>.
    } UNION {
      ?this up:proteome ?p14 .
      ?p14 skos:narrower <http://purl.uniprot.org/proteomes/Membrane#2>.
    }
    BIND(?this AS ?case1) .
  }
  OPTIONAL {
    ?this a up:Protein .
    {
      FILTER (! (EXISTS {
        {
          ?this up:proteome <http://purl.uniprot.org/proteomes/Membrane#any>.
        } UNION {
          ?this up:proteome ?p15 .
          ?p15 skos:narrower <http://purl.uniprot.org/proteomes/Membrane#any>.
        }
      })) .
    } UNION {
      {
        ?this up:proteome <http://purl.uniprot.org/proteomes/Membrane#1>.
      } UNION {
        ?this up:proteome ?p16 .
        ?p16 skos:narrower <http://purl.uniprot.org/proteomes/Membrane#1>.
      }
    }
    BIND(?this AS ?case2) .
  }
  OPTIONAL {
    ?this a up:Protein .
    VALUES ?supertaxon17 {taxon:561 taxon:620 taxon:590}
    ?this up:organism ?thisOrganism .
    ?thisOrganism rdfs:subClassOf+ ?supertaxon17 .
    BIND(?this AS ?case3) .
  }
  OPTIONAL {
    ?this a up:Protein .
    ?this up:organism ?thisOrganism .
    FILTER (! (EXISTS {
      VALUES ?supertaxon18 {taxon:561 taxon:620 taxon:590}
      ?thisOrganism rdfs:subClassOf+ ?supertaxon18 .
    })) .
    BIND(?this AS ?case4) .
  }
  OPTIONAL {
    ?this up:annotation ?samtransmembrane19 ;
      up:sequence ?thisSequence .
    ?samtransmembrane19 up:range ?samtransmembraner20 ;
      rdf:type up:Transmembrane_Annotation .
    ?samtransmembraner20 faldo:begin ?samtransmembraneb21 ;
      faldo:end ?samtransmembranee22 .
    ?samtransmembraneb21 faldo:position ?samtransmembranebp23 ;
      faldo:reference ?thisSequence .
    ?samtransmembranee22 faldo:position ?samtransmembraneep24 ;
      faldo:reference ?thisSequence .
    BIND(?this AS ?sam5) .
  }
  BIND(URI(CONCAT(STR(?this), '#MF_01085a11')) AS ?keyword11) .
  BIND(URI(CONCAT(STR(?this), '#MF_01085a12')) AS ?keyword12) .
  BIND(URI(CONCAT(STR(?this), '#MF_01085a13')) AS ?keyword13) .
}
""" .

<http://purl.uniprot.org/unirules/MF_01085> <http://www.w3.org/ns/shacl#rule> <http://purl.uniprot.org/unirules/MF_01085#construct> .