CONSTRUCT { _:393380 up:source unirule:MF_01128 . _:393381 up:source unirule:MF_01128 . _:393382 up:source unirule:MF_01128 . _:393383 up:source unirule:MF_01128 . _:393384 up:source unirule:MF_01128 . _:393385 up:source unirule:MF_01128 . _:393386 up:source unirule:MF_01128 . _:393387 up:source unirule:MF_01128 . _:393388 up:source unirule:MF_01128 . _:393389 up:source unirule:MF_01128 . _:393390 up:source unirule:MF_01128 . _:393391 up:source unirule:MF_01128 . _:393392 up:source unirule:MF_01128 . _:393393 up:source unirule:MF_01128 . _:393394 up:source unirule:MF_01128 . _:393395 up:source unirule:MF_01128 . _:393396 up:source unirule:MF_01128 . _:393397 up:source unirule:MF_01128 . _:393398 up:source unirule:MF_01128 . _:393399 up:source unirule:MF_01128 . _:393400 up:source unirule:MF_01128 . _:393401 up:source unirule:MF_01128 . _:393402 up:source unirule:MF_01128 . _:393403 up:source unirule:MF_01128 . _:393404 up:source unirule:MF_01128 . _:393405 up:source unirule:MF_01128 . _:393406 up:source unirule:MF_01128 . _:393407 up:source unirule:MF_01128 . _:393408 up:source unirule:MF_01128 . _:393409 up:source unirule:MF_01128 . _:393410 up:source unirule:MF_01128 . _:393411 up:source unirule:MF_01128 . _:393412 up:source unirule:MF_01128 . _:393413 up:source unirule:MF_01128 . _:393414 up:source unirule:MF_01128 . _:393415 up:source unirule:MF_01128 . _:393416 up:source unirule:MF_01128 . _:393417 up:source unirule:MF_01128 . _:393418 up:source unirule:MF_01128 . _:393419 up:source unirule:MF_01128 . _:393420 up:source unirule:MF_01128 . _:393421 up:source unirule:MF_01128 . _:393422 up:source unirule:MF_01128 . _:393423 up:source unirule:MF_01128 . _:393424 up:source unirule:MF_01128 . _:393425 up:source unirule:MF_01128 . _:393426 up:source unirule:MF_01128 . _:393427 up:source unirule:MF_01128 . _:393428 up:source unirule:MF_01128 . _:393429 up:source unirule:MF_01128 . _:393430 up:source unirule:MF_01128 . _:393431 up:source unirule:MF_01128 . _:393432 up:source unirule:MF_01128 . _:393433 up:source unirule:MF_01128 . _:393434 up:source unirule:MF_01128 . _:393435 up:source unirule:MF_01128 . _:393436 up:source unirule:MF_01128 . _:393437 up:source unirule:MF_01128 . _:393438 up:source unirule:MF_01128 . ?this up:annotation ?annotation1 , ?annotation2 , ?annotation4 , ?annotation5 ; up:classifiedWith GO:0005886 , GO:0006821 , GO:0015297 , keyword:1003 , keyword:1133 , keyword:406 , keyword:472 , keyword:50 , keyword:812 , keyword:813 , keyword:868 ; up:recommendedName ?name0 . ?name0 up:fullName 'H(+)/Cl(-) exchange transporter ClcA' ; rdf:type up:Structured_Name . ?annotation1 a up:Function_Annotation ; rdfs:comment 'Proton-coupled chloride transporter. Functions as antiport system and exchanges two chloride ions for 1 proton. Probably acts as an electrical shunt for an outwardly-directed proton pump that is linked to amino acid decarboxylation, as part of the extreme acid resistance (XAR) response.' . ?annotation2 up:activity ?activity3 ; rdf:type up:Catalytic_Activity_Annotation . ?activity3 up:catalyticActivity <http://rdf.rhea-db.org/29567>. ?annotation4 a up:Subunit_Annotation ; rdfs:comment 'Homodimer.' . ?annotation5 a up:Similarity_Annotation ; rdfs:comment 'Belongs to the chloride channel (TC 2.A.49) family. ClcA subfamily.' . ?case8 up:classifiedWith keyword:997 . ?pfs10 up:annotation ?annotation11 . ?annotation11 faldo:begin ?pfsb12 ; faldo:end ?pfse13 ; up:ligand ?ligand14 ; rdf:type up:Binding_Site_Annotation . ?pfsb12 faldo:position ?thisPositionOn15 ; rdf:type faldo:ExactPosition . ?pfse13 faldo:position ?thisPositionOn16 ; rdf:type faldo:ExactPosition . ?ligand14 rdfs:subClassOf chebi:17996 . ?pfs17 up:annotation ?annotation18 . ?annotation18 faldo:begin ?pfsb19 ; faldo:end ?pfse20 ; up:ligand ?ligand21 ; rdf:type up:Binding_Site_Annotation . ?pfsb19 faldo:position ?thisPositionOn22 ; rdf:type faldo:ExactPosition . ?pfse20 faldo:position ?thisPositionOn23 ; rdf:type faldo:ExactPosition . ?ligand21 rdfs:subClassOf chebi:17996 . ?pfs24 up:annotation ?annotation25 . ?annotation25 faldo:begin ?pfsb26 ; faldo:end ?pfse27 ; up:ligand ?ligand28 ; rdf:type up:Binding_Site_Annotation . ?pfsb26 faldo:position ?thisPositionOn29 ; rdf:type faldo:ExactPosition . ?pfse27 faldo:position ?thisPositionOn30 ; rdf:type faldo:ExactPosition . ?ligand28 rdfs:subClassOf chebi:17996 . ?pfs31 up:annotation ?annotation32 . ?annotation32 faldo:begin ?pfsb33 ; faldo:end ?pfse34 ; up:ligand ?ligand35 ; rdf:type up:Binding_Site_Annotation . ?pfsb33 faldo:position ?thisPositionOn36 ; rdf:type faldo:ExactPosition . ?pfse34 faldo:position ?thisPositionOn37 ; rdf:type faldo:ExactPosition . ?ligand35 rdfs:subClassOf chebi:17996 . ?pfs38 up:annotation ?annotation39 . ?annotation39 faldo:begin ?pfsb40 ; faldo:end ?pfse41 ; rdf:type up:Site_Annotation ; rdfs:comment 'Mediates proton transfer from the outer aqueous phase to the interior of the protein; involved in linking H(+) and Cl(-) transport' . ?pfsb40 faldo:position ?thisPositionOn42 ; rdf:type faldo:ExactPosition . ?pfse41 faldo:position ?thisPositionOn43 ; rdf:type faldo:ExactPosition . ?pfs44 up:annotation ?annotation45 . ?annotation45 faldo:begin ?pfsb46 ; faldo:end ?pfse47 ; rdf:type up:Site_Annotation ; rdfs:comment 'Mediates proton transfer from the protein to the inner aqueous phase' . ?pfsb46 faldo:position ?thisPositionOn48 ; rdf:type faldo:ExactPosition . ?pfse47 faldo:position ?thisPositionOn49 ; rdf:type faldo:ExactPosition . ?pfs50 up:annotation ?annotation51 . ?annotation51 faldo:begin ?pfsb52 ; faldo:end ?pfse53 ; rdf:type up:Topological_Domain_Annotation ; rdfs:comment 'Cytoplasmic' . ?pfsb52 faldo:position ?thisPositionOn54 ; rdf:type faldo:ExactPosition . ?pfse53 faldo:position ?thisPositionOn55 ; rdf:type faldo:ExactPosition . ?pfs56 up:annotation ?annotation57 . ?annotation57 faldo:begin ?pfsb58 ; faldo:end ?pfse59 ; rdf:type up:Transmembrane_Annotation ; rdfs:comment 'Helical' . ?pfsb58 faldo:position ?thisPositionOn60 ; rdf:type faldo:ExactPosition . ?pfse59 faldo:position ?thisPositionOn61 ; rdf:type faldo:ExactPosition . ?pfs62 up:annotation ?annotation63 . ?annotation63 faldo:begin ?pfsb64 ; faldo:end ?pfse65 ; rdf:type up:Topological_Domain_Annotation ; rdfs:comment 'Periplasmic' . ?pfsb64 faldo:position ?thisPositionOn66 ; rdf:type faldo:ExactPosition . ?pfse65 faldo:position ?thisPositionOn67 ; rdf:type faldo:ExactPosition . ?pfs68 up:annotation ?annotation69 . ?annotation69 faldo:begin ?pfsb70 ; faldo:end ?pfse71 ; rdf:type up:Transmembrane_Annotation ; rdfs:comment 'Helical' . ?pfsb70 faldo:position ?thisPositionOn72 ; rdf:type faldo:ExactPosition . ?pfse71 faldo:position ?thisPositionOn73 ; rdf:type faldo:ExactPosition . ?pfs74 up:annotation ?annotation75 . ?annotation75 faldo:begin ?pfsb76 ; faldo:end ?pfse77 ; rdf:type up:Intramembrane_Annotation ; rdfs:comment 'Helical' . ?pfsb76 faldo:position ?thisPositionOn78 ; rdf:type faldo:ExactPosition . ?pfse77 faldo:position ?thisPositionOn79 ; rdf:type faldo:ExactPosition . ?pfs80 up:annotation ?annotation81 . ?annotation81 faldo:begin ?pfsb82 ; faldo:end ?pfse83 ; rdf:type up:Topological_Domain_Annotation ; rdfs:comment 'Cytoplasmic' . ?pfsb82 faldo:position ?thisPositionOn84 ; rdf:type faldo:ExactPosition . ?pfse83 faldo:position ?thisPositionOn85 ; rdf:type faldo:ExactPosition . ?pfs86 up:annotation ?annotation87 . ?annotation87 faldo:begin ?pfsb88 ; faldo:end ?pfse89 ; rdf:type up:Transmembrane_Annotation ; rdfs:comment 'Helical' . ?pfsb88 faldo:position ?thisPositionOn90 ; rdf:type faldo:ExactPosition . ?pfse89 faldo:position ?thisPositionOn91 ; rdf:type faldo:ExactPosition . ?pfs92 up:annotation ?annotation93 . ?annotation93 faldo:begin ?pfsb94 ; faldo:end ?pfse95 ; rdf:type up:Transmembrane_Annotation ; rdfs:comment 'Helical' . ?pfsb94 faldo:position ?thisPositionOn96 ; rdf:type faldo:ExactPosition . ?pfse95 faldo:position ?thisPositionOn97 ; rdf:type faldo:ExactPosition . ?pfs98 up:annotation ?annotation99 . ?annotation99 faldo:begin ?pfsb100 ; faldo:end ?pfse101 ; rdf:type up:Topological_Domain_Annotation ; rdfs:comment 'Cytoplasmic' . ?pfsb100 faldo:position ?thisPositionOn102 ; rdf:type faldo:ExactPosition . ?pfse101 faldo:position ?thisPositionOn103 ; rdf:type faldo:ExactPosition . ?pfs104 up:annotation ?annotation105 . ?annotation105 faldo:begin ?pfsb106 ; faldo:end ?pfse107 ; rdf:type up:Intramembrane_Annotation ; rdfs:comment 'Helical' . ?pfsb106 faldo:position ?thisPositionOn108 ; rdf:type faldo:ExactPosition . ?pfse107 faldo:position ?thisPositionOn109 ; rdf:type faldo:ExactPosition . ?pfs110 up:annotation ?annotation111 . ?annotation111 faldo:begin ?pfsb112 ; faldo:end ?pfse113 ; rdf:type up:Intramembrane_Annotation ; rdfs:comment 'Helical' . ?pfsb112 faldo:position ?thisPositionOn114 ; rdf:type faldo:ExactPosition . ?pfse113 faldo:position ?thisPositionOn115 ; rdf:type faldo:ExactPosition . ?pfs116 up:annotation ?annotation117 . ?annotation117 faldo:begin ?pfsb118 ; faldo:end ?pfse119 ; rdf:type up:Topological_Domain_Annotation ; rdfs:comment 'Cytoplasmic' . ?pfsb118 faldo:position ?thisPositionOn120 ; rdf:type faldo:ExactPosition . ?pfse119 faldo:position ?thisPositionOn121 ; rdf:type faldo:ExactPosition . ?pfs122 up:annotation ?annotation123 . ?annotation123 faldo:begin ?pfsb124 ; faldo:end ?pfse125 ; rdf:type up:Transmembrane_Annotation ; rdfs:comment 'Helical' . ?pfsb124 faldo:position ?thisPositionOn126 ; rdf:type faldo:ExactPosition . ?pfse125 faldo:position ?thisPositionOn127 ; rdf:type faldo:ExactPosition . ?pfs128 up:annotation ?annotation129 . ?annotation129 faldo:begin ?pfsb130 ; faldo:end ?pfse131 ; rdf:type up:Topological_Domain_Annotation ; rdfs:comment 'Periplasmic' . ?pfsb130 faldo:position ?thisPositionOn132 ; rdf:type faldo:ExactPosition . ?pfse131 faldo:position ?thisPositionOn133 ; rdf:type faldo:ExactPosition . ?pfs134 up:annotation ?annotation135 . ?annotation135 faldo:begin ?pfsb136 ; faldo:end ?pfse137 ; rdf:type up:Transmembrane_Annotation ; rdfs:comment 'Helical' . ?pfsb136 faldo:position ?thisPositionOn138 ; rdf:type faldo:ExactPosition . ?pfse137 faldo:position ?thisPositionOn139 ; rdf:type faldo:ExactPosition . ?pfs140 up:annotation ?annotation141 . ?annotation141 faldo:begin ?pfsb142 ; faldo:end ?pfse143 ; rdf:type up:Topological_Domain_Annotation ; rdfs:comment 'Cytoplasmic' . ?pfsb142 faldo:position ?thisPositionOn144 ; rdf:type faldo:ExactPosition . ?pfse143 faldo:position ?thisPositionOn145 ; rdf:type faldo:ExactPosition . ?pfs146 up:annotation ?annotation147 . ?annotation147 faldo:begin ?pfsb148 ; faldo:end ?pfse149 ; rdf:type up:Transmembrane_Annotation ; rdfs:comment 'Helical' . ?pfsb148 faldo:position ?thisPositionOn150 ; rdf:type faldo:ExactPosition . ?pfse149 faldo:position ?thisPositionOn151 ; rdf:type faldo:ExactPosition . ?pfs152 up:annotation ?annotation153 . ?annotation153 faldo:begin ?pfsb154 ; faldo:end ?pfse155 ; rdf:type up:Topological_Domain_Annotation ; rdfs:comment 'Periplasmic' . ?pfsb154 faldo:position ?thisPositionOn156 ; rdf:type faldo:ExactPosition . ?pfse155 faldo:position ?thisPositionOn157 ; rdf:type faldo:ExactPosition . ?pfs158 up:annotation ?annotation159 . ?annotation159 faldo:begin ?pfsb160 ; faldo:end ?pfse161 ; rdf:type up:Transmembrane_Annotation ; rdfs:comment 'Helical' . ?pfsb160 faldo:position ?thisPositionOn162 ; rdf:type faldo:ExactPosition . ?pfse161 faldo:position ?thisPositionOn163 ; rdf:type faldo:ExactPosition . ?pfs164 up:annotation ?annotation165 . ?annotation165 faldo:begin ?pfsb166 ; faldo:end ?pfse167 ; rdf:type up:Transmembrane_Annotation ; rdfs:comment 'Helical' . ?pfsb166 faldo:position ?thisPositionOn168 ; rdf:type faldo:ExactPosition . ?pfse167 faldo:position ?thisPositionOn169 ; rdf:type faldo:ExactPosition . ?pfs170 up:annotation ?annotation171 . ?annotation171 faldo:begin ?pfsb172 ; faldo:end ?pfse173 ; rdf:type up:Topological_Domain_Annotation ; rdfs:comment 'Periplasmic' . ?pfsb172 faldo:position ?thisPositionOn174 ; rdf:type faldo:ExactPosition . ?pfse173 faldo:position ?thisPositionOn175 ; rdf:type faldo:ExactPosition . ?pfs176 up:annotation ?annotation177 . ?annotation177 faldo:begin ?pfsb178 ; faldo:end ?pfse179 ; rdf:type up:Intramembrane_Annotation ; rdfs:comment 'Helical' . ?pfsb178 faldo:position ?thisPositionOn180 ; rdf:type faldo:ExactPosition . ?pfse179 faldo:position ?thisPositionOn181 ; rdf:type faldo:ExactPosition . ?pfs182 up:annotation ?annotation183 . ?annotation183 faldo:begin ?pfsb184 ; faldo:end ?pfse185 ; rdf:type up:Intramembrane_Annotation ; rdfs:comment 'Note=Loop between two helices' . ?pfsb184 faldo:position ?thisPositionOn186 ; rdf:type faldo:ExactPosition . ?pfse185 faldo:position ?thisPositionOn187 ; rdf:type faldo:ExactPosition . ?pfs188 up:annotation ?annotation189 . ?annotation189 faldo:begin ?pfsb190 ; faldo:end ?pfse191 ; rdf:type up:Intramembrane_Annotation ; rdfs:comment 'Helical' . ?pfsb190 faldo:position ?thisPositionOn192 ; rdf:type faldo:ExactPosition . ?pfse191 faldo:position ?thisPositionOn193 ; rdf:type faldo:ExactPosition . ?pfs194 up:annotation ?annotation195 . ?annotation195 faldo:begin ?pfsb196 ; faldo:end ?pfse197 ; rdf:type up:Intramembrane_Annotation ; rdfs:comment 'Note=Loop between two helices' . ?pfsb196 faldo:position ?thisPositionOn198 ; rdf:type faldo:ExactPosition . ?pfse197 faldo:position ?thisPositionOn199 ; rdf:type faldo:ExactPosition . ?pfs200 up:annotation ?annotation201 . ?annotation201 faldo:begin ?pfsb202 ; faldo:end ?pfse203 ; rdf:type up:Transmembrane_Annotation ; rdfs:comment 'Helical' . ?pfsb202 faldo:position ?thisPositionOn204 ; rdf:type faldo:ExactPosition . ?pfse203 faldo:position ?thisPositionOn205 ; rdf:type faldo:ExactPosition . ?pfs206 up:annotation ?annotation207 . ?annotation207 faldo:begin ?pfsb208 ; faldo:end ?pfse209 ; rdf:type up:Topological_Domain_Annotation ; rdfs:comment 'Cytoplasmic' . ?pfsb208 faldo:position ?thisPositionOn210 ; rdf:type faldo:ExactPosition . ?pfse209 faldo:position ?thisPositionOn211 ; rdf:type faldo:ExactPosition . ?pfs212 up:annotation ?annotation213 . ?annotation213 faldo:begin ?pfsb214 ; faldo:end ?pfse215 ; rdf:type up:Motif_Annotation ; rdfs:comment 'Selectivity filter part_1' . ?pfsb214 faldo:position ?thisPositionOn216 ; rdf:type faldo:ExactPosition . ?pfse215 faldo:position ?thisPositionOn217 ; rdf:type faldo:ExactPosition . ?pfs218 up:annotation ?annotation219 . ?annotation219 faldo:begin ?pfsb220 ; faldo:end ?pfse221 ; rdf:type up:Motif_Annotation ; rdfs:comment 'Selectivity filter part_2' . ?pfsb220 faldo:position ?thisPositionOn222 ; rdf:type faldo:ExactPosition . ?pfse221 faldo:position ?thisPositionOn223 ; rdf:type faldo:ExactPosition . ?pfs224 up:annotation ?annotation225 . ?annotation225 faldo:begin ?pfsb226 ; faldo:end ?pfse227 ; rdf:type up:Motif_Annotation ; rdfs:comment 'Selectivity filter part_3' . ?pfsb226 faldo:position ?thisPositionOn228 ; rdf:type faldo:ExactPosition . ?pfse227 faldo:position ?thisPositionOn229 ; rdf:type faldo:ExactPosition . ?sam230 up:classifiedWith keyword:1133 , keyword:472 , keyword:812 . ?transmembrane231 faldo:begin ?transmembraneb232 ; faldo:end ?transmembranee233 . ?transmembraneb232 faldo:position ?transmembranebp234 . ?transmembranee233 faldo:position ?transmembraneep235 . ?keyword236 up:range ?transmembrane231 . ?keyword237 up:range ?transmembrane231 . ?keyword238 up:range ?transmembrane231 . ?sam239 up:classifiedWith keyword:1133 , keyword:472 , keyword:812 . ?transmembrane240 faldo:begin ?transmembraneb241 ; faldo:end ?transmembranee242 . ?transmembraneb241 faldo:position ?transmembranebp243 . ?transmembranee242 faldo:position ?transmembraneep244 . ?keyword245 up:range ?transmembrane240 . ?keyword246 up:range ?transmembrane240 . ?keyword247 up:range ?transmembrane240 . _:393439 a rdf:Statement ; up:attribution _:393380 ; rdf:subject ?this ; rdf:predicate up:recommendedName ; rdf:object ?name0 . _:393440 a rdf:Statement ; up:attribution _:393381 ; rdf:subject ?this ; rdf:predicate up:annotation ; rdf:object ?annotation1 . _:393441 a rdf:Statement ; up:attribution _:393382 ; rdf:subject ?this ; rdf:predicate up:annotation ; rdf:object ?annotation2 . _:393442 a rdf:Statement ; up:attribution _:393383 ; rdf:subject ?this ; rdf:predicate up:annotation ; rdf:object ?annotation4 . _:393443 a rdf:Statement ; up:attribution _:393384 ; rdf:subject ?this ; rdf:predicate up:annotation ; rdf:object ?annotation5 . _:393444 a rdf:Statement ; up:attribution _:393385 ; rdf:subject ?this ; rdf:predicate up:classifiedWith ; rdf:object keyword:50 . _:393445 a rdf:Statement ; up:attribution _:393386 ; rdf:subject ?this ; rdf:predicate up:classifiedWith ; rdf:object keyword:1003 . _:393446 a rdf:Statement ; up:attribution _:393387 ; rdf:subject ?this ; rdf:predicate up:classifiedWith ; rdf:object keyword:868 . _:393447 a rdf:Statement ; up:attribution _:393388 ; rdf:subject ?this ; rdf:predicate up:classifiedWith ; rdf:object keyword:406 . _:393448 a rdf:Statement ; up:attribution _:393389 ; rdf:subject ?this ; rdf:predicate up:classifiedWith ; rdf:object keyword:472 . _:393449 a rdf:Statement ; up:attribution _:393390 ; rdf:subject ?this ; rdf:predicate up:classifiedWith ; rdf:object keyword:812 . _:393450 a rdf:Statement ; up:attribution _:393391 ; rdf:subject ?this ; rdf:predicate up:classifiedWith ; rdf:object keyword:813 . _:393451 a rdf:Statement ; up:attribution _:393392 ; rdf:subject ?this ; rdf:predicate up:classifiedWith ; rdf:object keyword:1133 . _:393452 a rdf:Statement ; up:attribution _:393393 ; rdf:subject ?this ; rdf:predicate up:classifiedWith ; rdf:object GO:0015297 . _:393453 a rdf:Statement ; up:attribution _:393394 ; rdf:subject ?this ; rdf:predicate up:classifiedWith ; rdf:object GO:0006821 . _:393454 a rdf:Statement ; up:attribution _:393395 ; rdf:subject ?this ; rdf:predicate up:classifiedWith ; rdf:object GO:0005886 . _:393455 a rdf:Statement ; up:attribution _:393396 ; rdf:subject ?case8 ; rdf:predicate up:classifiedWith ; rdf:object keyword:997 . _:393456 a rdf:Statement ; up:source unirule:MF_01128 ; rdf:subject ?pfs10 ; rdf:predicate up:annotation ; rdf:object ?annotation11 . _:393457 a rdf:Statement ; up:attribution _:393397 ; rdf:subject ?pfs10 ; rdf:predicate up:annotation ; rdf:object ?annotation11 . _:393458 a rdf:Statement ; up:source unirule:MF_01128 ; rdf:subject ?pfs17 ; rdf:predicate up:annotation ; rdf:object ?annotation18 . _:393459 a rdf:Statement ; up:attribution _:393398 ; rdf:subject ?pfs17 ; rdf:predicate up:annotation ; rdf:object ?annotation18 . _:393460 a rdf:Statement ; up:source unirule:MF_01128 ; rdf:subject ?pfs24 ; rdf:predicate up:annotation ; rdf:object ?annotation25 . _:393461 a rdf:Statement ; up:attribution _:393399 ; rdf:subject ?pfs24 ; rdf:predicate up:annotation ; rdf:object ?annotation25 . _:393462 a rdf:Statement ; up:source unirule:MF_01128 ; rdf:subject ?pfs31 ; rdf:predicate up:annotation ; rdf:object ?annotation32 . _:393463 a rdf:Statement ; up:attribution _:393400 ; rdf:subject ?pfs31 ; rdf:predicate up:annotation ; rdf:object ?annotation32 . _:393464 a rdf:Statement ; up:source unirule:MF_01128 ; rdf:subject ?pfs38 ; rdf:predicate up:annotation ; rdf:object ?annotation39 . _:393465 a rdf:Statement ; up:attribution _:393401 ; rdf:subject ?pfs38 ; rdf:predicate up:annotation ; rdf:object ?annotation39 . _:393466 a rdf:Statement ; up:source unirule:MF_01128 ; rdf:subject ?pfs44 ; rdf:predicate up:annotation ; rdf:object ?annotation45 . _:393467 a rdf:Statement ; up:attribution _:393402 ; rdf:subject ?pfs44 ; rdf:predicate up:annotation ; rdf:object ?annotation45 . _:393468 a rdf:Statement ; up:source unirule:MF_01128 ; rdf:subject ?pfs50 ; rdf:predicate up:annotation ; rdf:object ?annotation51 . _:393469 a rdf:Statement ; up:attribution _:393403 ; rdf:subject ?pfs50 ; rdf:predicate up:annotation ; rdf:object ?annotation51 . _:393470 a rdf:Statement ; up:source unirule:MF_01128 ; rdf:subject ?pfs56 ; rdf:predicate up:annotation ; rdf:object ?annotation57 . _:393471 a rdf:Statement ; up:attribution _:393404 ; rdf:subject ?pfs56 ; rdf:predicate up:annotation ; rdf:object ?annotation57 . _:393472 a rdf:Statement ; up:source unirule:MF_01128 ; rdf:subject ?pfs62 ; rdf:predicate up:annotation ; rdf:object ?annotation63 . _:393473 a rdf:Statement ; up:attribution _:393405 ; rdf:subject ?pfs62 ; rdf:predicate up:annotation ; rdf:object ?annotation63 . _:393474 a rdf:Statement ; up:source unirule:MF_01128 ; rdf:subject ?pfs68 ; rdf:predicate up:annotation ; rdf:object ?annotation69 . _:393475 a rdf:Statement ; up:attribution _:393406 ; rdf:subject ?pfs68 ; rdf:predicate up:annotation ; rdf:object ?annotation69 . _:393476 a rdf:Statement ; up:source unirule:MF_01128 ; rdf:subject ?pfs74 ; rdf:predicate up:annotation ; rdf:object ?annotation75 . _:393477 a rdf:Statement ; up:attribution _:393407 ; rdf:subject ?pfs74 ; rdf:predicate up:annotation ; rdf:object ?annotation75 . _:393478 a rdf:Statement ; up:source unirule:MF_01128 ; rdf:subject ?pfs80 ; rdf:predicate up:annotation ; rdf:object ?annotation81 . _:393479 a rdf:Statement ; up:attribution _:393408 ; rdf:subject ?pfs80 ; rdf:predicate up:annotation ; rdf:object ?annotation81 . _:393480 a rdf:Statement ; up:source unirule:MF_01128 ; rdf:subject ?pfs86 ; rdf:predicate up:annotation ; rdf:object ?annotation87 . _:393481 a rdf:Statement ; up:attribution _:393409 ; rdf:subject ?pfs86 ; rdf:predicate up:annotation ; rdf:object ?annotation87 . _:393482 a rdf:Statement ; up:source unirule:MF_01128 ; rdf:subject ?pfs92 ; rdf:predicate up:annotation ; rdf:object ?annotation93 . _:393483 a rdf:Statement ; up:attribution _:393410 ; rdf:subject ?pfs92 ; rdf:predicate up:annotation ; rdf:object ?annotation93 . _:393484 a rdf:Statement ; up:source unirule:MF_01128 ; rdf:subject ?pfs98 ; rdf:predicate up:annotation ; rdf:object ?annotation99 . _:393485 a rdf:Statement ; up:attribution _:393411 ; rdf:subject ?pfs98 ; rdf:predicate up:annotation ; rdf:object ?annotation99 . _:393486 a rdf:Statement ; up:source unirule:MF_01128 ; rdf:subject ?pfs104 ; rdf:predicate up:annotation ; rdf:object ?annotation105 . _:393487 a rdf:Statement ; up:attribution _:393412 ; rdf:subject ?pfs104 ; rdf:predicate up:annotation ; rdf:object ?annotation105 . _:393488 a rdf:Statement ; up:source unirule:MF_01128 ; rdf:subject ?pfs110 ; rdf:predicate up:annotation ; rdf:object ?annotation111 . _:393489 a rdf:Statement ; up:attribution _:393413 ; rdf:subject ?pfs110 ; rdf:predicate up:annotation ; rdf:object ?annotation111 . _:393490 a rdf:Statement ; up:source unirule:MF_01128 ; rdf:subject ?pfs116 ; rdf:predicate up:annotation ; rdf:object ?annotation117 . _:393491 a rdf:Statement ; up:attribution _:393414 ; rdf:subject ?pfs116 ; rdf:predicate up:annotation ; rdf:object ?annotation117 . _:393492 a rdf:Statement ; up:source unirule:MF_01128 ; rdf:subject ?pfs122 ; rdf:predicate up:annotation ; rdf:object ?annotation123 . _:393493 a rdf:Statement ; up:attribution _:393415 ; rdf:subject ?pfs122 ; rdf:predicate up:annotation ; rdf:object ?annotation123 . _:393494 a rdf:Statement ; up:source unirule:MF_01128 ; rdf:subject ?pfs128 ; rdf:predicate up:annotation ; rdf:object ?annotation129 . _:393495 a rdf:Statement ; up:attribution _:393416 ; rdf:subject ?pfs128 ; rdf:predicate up:annotation ; rdf:object ?annotation129 . _:393496 a rdf:Statement ; up:source unirule:MF_01128 ; rdf:subject ?pfs134 ; rdf:predicate up:annotation ; rdf:object ?annotation135 . _:393497 a rdf:Statement ; up:attribution _:393417 ; rdf:subject ?pfs134 ; rdf:predicate up:annotation ; rdf:object ?annotation135 . _:393498 a rdf:Statement ; up:source unirule:MF_01128 ; rdf:subject ?pfs140 ; rdf:predicate up:annotation ; rdf:object ?annotation141 . _:393499 a rdf:Statement ; up:attribution _:393418 ; rdf:subject ?pfs140 ; rdf:predicate up:annotation ; rdf:object ?annotation141 . _:393500 a rdf:Statement ; up:source unirule:MF_01128 ; rdf:subject ?pfs146 ; rdf:predicate up:annotation ; rdf:object ?annotation147 . _:393501 a rdf:Statement ; up:attribution _:393419 ; rdf:subject ?pfs146 ; rdf:predicate up:annotation ; rdf:object ?annotation147 . _:393502 a rdf:Statement ; up:source unirule:MF_01128 ; rdf:subject ?pfs152 ; rdf:predicate up:annotation ; rdf:object ?annotation153 . _:393503 a rdf:Statement ; up:attribution _:393420 ; rdf:subject ?pfs152 ; rdf:predicate up:annotation ; rdf:object ?annotation153 . _:393504 a rdf:Statement ; up:source unirule:MF_01128 ; rdf:subject ?pfs158 ; rdf:predicate up:annotation ; rdf:object ?annotation159 . _:393505 a rdf:Statement ; up:attribution _:393421 ; rdf:subject ?pfs158 ; rdf:predicate up:annotation ; rdf:object ?annotation159 . _:393506 a rdf:Statement ; up:source unirule:MF_01128 ; rdf:subject ?pfs164 ; rdf:predicate up:annotation ; rdf:object ?annotation165 . _:393507 a rdf:Statement ; up:attribution _:393422 ; rdf:subject ?pfs164 ; rdf:predicate up:annotation ; rdf:object ?annotation165 . _:393508 a rdf:Statement ; up:source unirule:MF_01128 ; rdf:subject ?pfs170 ; rdf:predicate up:annotation ; rdf:object ?annotation171 . _:393509 a rdf:Statement ; up:attribution _:393423 ; rdf:subject ?pfs170 ; rdf:predicate up:annotation ; rdf:object ?annotation171 . _:393510 a rdf:Statement ; up:source unirule:MF_01128 ; rdf:subject ?pfs176 ; rdf:predicate up:annotation ; rdf:object ?annotation177 . _:393511 a rdf:Statement ; up:attribution _:393424 ; rdf:subject ?pfs176 ; rdf:predicate up:annotation ; rdf:object ?annotation177 . _:393512 a rdf:Statement ; up:source unirule:MF_01128 ; rdf:subject ?pfs182 ; rdf:predicate up:annotation ; rdf:object ?annotation183 . _:393513 a rdf:Statement ; up:attribution _:393425 ; rdf:subject ?pfs182 ; rdf:predicate up:annotation ; rdf:object ?annotation183 . _:393514 a rdf:Statement ; up:source unirule:MF_01128 ; rdf:subject ?pfs188 ; rdf:predicate up:annotation ; rdf:object ?annotation189 . _:393515 a rdf:Statement ; up:attribution _:393426 ; rdf:subject ?pfs188 ; rdf:predicate up:annotation ; rdf:object ?annotation189 . _:393516 a rdf:Statement ; up:source unirule:MF_01128 ; rdf:subject ?pfs194 ; rdf:predicate up:annotation ; rdf:object ?annotation195 . _:393517 a rdf:Statement ; up:attribution _:393427 ; rdf:subject ?pfs194 ; rdf:predicate up:annotation ; rdf:object ?annotation195 . _:393518 a rdf:Statement ; up:source unirule:MF_01128 ; rdf:subject ?pfs200 ; rdf:predicate up:annotation ; rdf:object ?annotation201 . _:393519 a rdf:Statement ; up:attribution _:393428 ; rdf:subject ?pfs200 ; rdf:predicate up:annotation ; rdf:object ?annotation201 . _:393520 a rdf:Statement ; up:source unirule:MF_01128 ; rdf:subject ?pfs206 ; rdf:predicate up:annotation ; rdf:object ?annotation207 . _:393521 a rdf:Statement ; up:attribution _:393429 ; rdf:subject ?pfs206 ; rdf:predicate up:annotation ; rdf:object ?annotation207 . _:393522 a rdf:Statement ; up:source unirule:MF_01128 ; rdf:subject ?pfs212 ; rdf:predicate up:annotation ; rdf:object ?annotation213 . _:393523 a rdf:Statement ; up:attribution _:393430 ; rdf:subject ?pfs212 ; rdf:predicate up:annotation ; rdf:object ?annotation213 . _:393524 a rdf:Statement ; up:source unirule:MF_01128 ; rdf:subject ?pfs218 ; rdf:predicate up:annotation ; rdf:object ?annotation219 . _:393525 a rdf:Statement ; up:attribution _:393431 ; rdf:subject ?pfs218 ; rdf:predicate up:annotation ; rdf:object ?annotation219 . _:393526 a rdf:Statement ; up:source unirule:MF_01128 ; rdf:subject ?pfs224 ; rdf:predicate up:annotation ; rdf:object ?annotation225 . _:393527 a rdf:Statement ; up:attribution _:393432 ; rdf:subject ?pfs224 ; rdf:predicate up:annotation ; rdf:object ?annotation225 . _:393528 a rdf:Statement ; up:attribution _:393433 ; rdf:subject ?sam230 ; rdf:predicate up:classifiedWith ; rdf:object keyword:472 . _:393529 a rdf:Statement ; up:attribution _:393434 ; rdf:subject ?sam230 ; rdf:predicate up:classifiedWith ; rdf:object keyword:812 . _:393530 a rdf:Statement ; up:attribution _:393435 ; rdf:subject ?sam230 ; rdf:predicate up:classifiedWith ; rdf:object keyword:1133 . _:393531 a rdf:Statement ; up:attribution _:393436 ; rdf:subject ?sam239 ; rdf:predicate up:classifiedWith ; rdf:object keyword:472 . _:393532 a rdf:Statement ; up:attribution _:393437 ; rdf:subject ?sam239 ; rdf:predicate up:classifiedWith ; rdf:object keyword:812 . _:393533 a rdf:Statement ; up:attribution _:393438 ; rdf:subject ?sam239 ; rdf:predicate up:classifiedWith ; rdf:object keyword:1133 . } WHERE { #baseURI: http://purl.uniprot.org/unirule/MF_01128 #Rule MF_01128 Created by:? on:2005-02-28 Modified by:Edouard de Castro on:2022-11-19 ?this up:organism ?thisOrganism ; rdfs:seeAlso signature:MF_01128 . ?thisOrganism rdfs:subClassOf+ taxon:2 . BIND(URI(CONCAT(STR(?this), '#MF_01128a0')) AS ?name0) . BIND(URI(CONCAT(STR(?this), '#MF_01128a1')) AS ?annotation1) . BIND(URI(CONCAT(STR(?this), '#MF_01128a2')) AS ?annotation2) . BIND(URI(CONCAT(STR(?this), '#MF_01128a4')) AS ?annotation4) . BIND(URI(CONCAT(STR(?this), '#MF_01128a5')) AS ?annotation5) . OPTIONAL { ?this up:sequence ?thisSequence . ?thisSequence rdf:value ?thisSequenceValue . ?templateMotifMatch252 faldo:location ?templateMotifSequenceMatchRegionP37019253 ; edam:is_output_of ?templateMotifSequenceProfileAlignmentOperationP37019255 ; rdf:type edam:data_0869 ; rdf:value ?templateMotifCigarP37019MF_01128248 . ?templateMotifSequenceMatchRegionP37019253 faldo:begin ?templateMotifSequenceMatchBeginP37019254 . ?templateMotifSequenceMatchBeginP37019254 faldo:position ?templateMotifSequenceMatchBeginPositionP37019249 ; faldo:reference isoform:P37019-1 . ?templateMotifSequenceProfileAlignmentOperationP37019255 edam:has_input signature:MF_01128 ; rdf:type edam:operation_0300 . ?targetMotifMatch256 faldo:location ?targetMotifMatchRegionMatch257 ; edam:is_output_of ?targetMotifSequenceAlignmentOperationMF_01128259 ; rdf:type edam:data_0869 ; rdf:value ?targetMotifMatchCigarP37019MF_01128250 . ?targetMotifMatchRegionMatch257 faldo:begin ?targetMotifMatchRegionMatchBeginMF_01128258 . ?targetMotifMatchRegionMatchBeginMF_01128258 faldo:position ?targetMotifMatchRegionMatchBeginPositionMF_01128251 ; faldo:reference ?thisSequence . ?targetMotifSequenceAlignmentOperationMF_01128259 edam:has_input signature:MF_01128 ; rdf:type edam:operation_0300 . BIND(STRLEN(REPLACE(SUBSTR(?templateMotifCigarP37019MF_01128248, 1, (STRLEN(?templateMotifCigarP37019MF_01128248) - STRLEN(REPLACE(?templateMotifCigarP37019MF_01128248, CONCAT('^(?:-*[^-]){', STR(((107 - ?templateMotifSequenceMatchBeginPositionP37019249) + 1)), '}'), '')))), '[a-z]', '')) AS ?step1260) . BIND((STRLEN(SUBSTR(?targetMotifMatchCigarP37019MF_01128250, 1, (STRLEN(?targetMotifMatchCigarP37019MF_01128250) - STRLEN(REPLACE(?targetMotifMatchCigarP37019MF_01128250, CONCAT('^(?:[a-z]*(?:[A-Z]|-)){', STR(?step1260), '}'), ''))))) - STRLEN(REPLACE(SUBSTR(?targetMotifMatchCigarP37019MF_01128250, 1, (STRLEN(?targetMotifMatchCigarP37019MF_01128250) - STRLEN(REPLACE(?targetMotifMatchCigarP37019MF_01128250, CONCAT('^(?:[a-z]*(?:[A-Z]|-)){', STR(?step1260), '}'), '')))), '[^-]', ''))) AS ?step2261) . BIND(((?step2261 + ?targetMotifMatchRegionMatchBeginPositionMF_01128251) - 1) AS ?thisPositionOn15) . BIND(?thisPositionOn15 AS ?thisPositionOn16) . BIND(?this AS ?pfs1t262) . BIND(URI(CONCAT(STR(?thisSequence), '#position', STR(?thisPositionOn15))) AS ?pfsb12) . BIND(URI(CONCAT(STR(?thisSequence), '#position', STR(?thisPositionOn16))) AS ?pfse13) . FILTER ((SUBSTR(?thisSequenceValue, ?thisPositionOn15, 1) = 'S')) . BIND(URI(CONCAT(STR(?this), '#MF_01128a11')) AS ?annotation11) . BIND(?this AS ?pfs10) . } OPTIONAL { ?this up:sequence ?thisSequence . ?thisSequence rdf:value ?thisSequenceValue . ?templateMotifMatch267 faldo:location ?templateMotifSequenceMatchRegionP37019268 ; edam:is_output_of ?templateMotifSequenceProfileAlignmentOperationP37019270 ; rdf:type edam:data_0869 ; rdf:value ?templateMotifCigarP37019MF_01128263 . ?templateMotifSequenceMatchRegionP37019268 faldo:begin ?templateMotifSequenceMatchBeginP37019269 . ?templateMotifSequenceMatchBeginP37019269 faldo:position ?templateMotifSequenceMatchBeginPositionP37019264 ; faldo:reference isoform:P37019-1 . ?templateMotifSequenceProfileAlignmentOperationP37019270 edam:has_input signature:MF_01128 ; rdf:type edam:operation_0300 . ?targetMotifMatch271 faldo:location ?targetMotifMatchRegionMatch272 ; edam:is_output_of ?targetMotifSequenceAlignmentOperationMF_01128274 ; rdf:type edam:data_0869 ; rdf:value ?targetMotifMatchCigarP37019MF_01128265 . ?targetMotifMatchRegionMatch272 faldo:begin ?targetMotifMatchRegionMatchBeginMF_01128273 . ?targetMotifMatchRegionMatchBeginMF_01128273 faldo:position ?targetMotifMatchRegionMatchBeginPositionMF_01128266 ; faldo:reference ?thisSequence . ?targetMotifSequenceAlignmentOperationMF_01128274 edam:has_input signature:MF_01128 ; rdf:type edam:operation_0300 . BIND(STRLEN(REPLACE(SUBSTR(?templateMotifCigarP37019MF_01128263, 1, (STRLEN(?templateMotifCigarP37019MF_01128263) - STRLEN(REPLACE(?templateMotifCigarP37019MF_01128263, CONCAT('^(?:-*[^-]){', STR(((356 - ?templateMotifSequenceMatchBeginPositionP37019264) + 1)), '}'), '')))), '[a-z]', '')) AS ?step1275) . BIND((STRLEN(SUBSTR(?targetMotifMatchCigarP37019MF_01128265, 1, (STRLEN(?targetMotifMatchCigarP37019MF_01128265) - STRLEN(REPLACE(?targetMotifMatchCigarP37019MF_01128265, CONCAT('^(?:[a-z]*(?:[A-Z]|-)){', STR(?step1275), '}'), ''))))) - STRLEN(REPLACE(SUBSTR(?targetMotifMatchCigarP37019MF_01128265, 1, (STRLEN(?targetMotifMatchCigarP37019MF_01128265) - STRLEN(REPLACE(?targetMotifMatchCigarP37019MF_01128265, CONCAT('^(?:[a-z]*(?:[A-Z]|-)){', STR(?step1275), '}'), '')))), '[^-]', ''))) AS ?step2276) . BIND(((?step2276 + ?targetMotifMatchRegionMatchBeginPositionMF_01128266) - 1) AS ?thisPositionOn22) . BIND(?thisPositionOn22 AS ?thisPositionOn23) . BIND(?this AS ?pfs1t277) . BIND(URI(CONCAT(STR(?thisSequence), '#position', STR(?thisPositionOn22))) AS ?pfsb19) . BIND(URI(CONCAT(STR(?thisSequence), '#position', STR(?thisPositionOn23))) AS ?pfse20) . FILTER ((SUBSTR(?thisSequenceValue, ?thisPositionOn22, 1) = 'I')) . BIND(URI(CONCAT(STR(?this), '#MF_01128a18')) AS ?annotation18) . BIND(?this AS ?pfs17) . } OPTIONAL { ?this up:sequence ?thisSequence . ?thisSequence rdf:value ?thisSequenceValue . ?templateMotifMatch282 faldo:location ?templateMotifSequenceMatchRegionP37019283 ; edam:is_output_of ?templateMotifSequenceProfileAlignmentOperationP37019285 ; rdf:type edam:data_0869 ; rdf:value ?templateMotifCigarP37019MF_01128278 . ?templateMotifSequenceMatchRegionP37019283 faldo:begin ?templateMotifSequenceMatchBeginP37019284 . ?templateMotifSequenceMatchBeginP37019284 faldo:position ?templateMotifSequenceMatchBeginPositionP37019279 ; faldo:reference isoform:P37019-1 . ?templateMotifSequenceProfileAlignmentOperationP37019285 edam:has_input signature:MF_01128 ; rdf:type edam:operation_0300 . ?targetMotifMatch286 faldo:location ?targetMotifMatchRegionMatch287 ; edam:is_output_of ?targetMotifSequenceAlignmentOperationMF_01128289 ; rdf:type edam:data_0869 ; rdf:value ?targetMotifMatchCigarP37019MF_01128280 . ?targetMotifMatchRegionMatch287 faldo:begin ?targetMotifMatchRegionMatchBeginMF_01128288 . ?targetMotifMatchRegionMatchBeginMF_01128288 faldo:position ?targetMotifMatchRegionMatchBeginPositionMF_01128281 ; faldo:reference ?thisSequence . ?targetMotifSequenceAlignmentOperationMF_01128289 edam:has_input signature:MF_01128 ; rdf:type edam:operation_0300 . BIND(STRLEN(REPLACE(SUBSTR(?templateMotifCigarP37019MF_01128278, 1, (STRLEN(?templateMotifCigarP37019MF_01128278) - STRLEN(REPLACE(?templateMotifCigarP37019MF_01128278, CONCAT('^(?:-*[^-]){', STR(((357 - ?templateMotifSequenceMatchBeginPositionP37019279) + 1)), '}'), '')))), '[a-z]', '')) AS ?step1290) . BIND((STRLEN(SUBSTR(?targetMotifMatchCigarP37019MF_01128280, 1, (STRLEN(?targetMotifMatchCigarP37019MF_01128280) - STRLEN(REPLACE(?targetMotifMatchCigarP37019MF_01128280, CONCAT('^(?:[a-z]*(?:[A-Z]|-)){', STR(?step1290), '}'), ''))))) - STRLEN(REPLACE(SUBSTR(?targetMotifMatchCigarP37019MF_01128280, 1, (STRLEN(?targetMotifMatchCigarP37019MF_01128280) - STRLEN(REPLACE(?targetMotifMatchCigarP37019MF_01128280, CONCAT('^(?:[a-z]*(?:[A-Z]|-)){', STR(?step1290), '}'), '')))), '[^-]', ''))) AS ?step2291) . BIND(((?step2291 + ?targetMotifMatchRegionMatchBeginPositionMF_01128281) - 1) AS ?thisPositionOn29) . BIND(?thisPositionOn29 AS ?thisPositionOn30) . BIND(?this AS ?pfs1t292) . BIND(URI(CONCAT(STR(?thisSequence), '#position', STR(?thisPositionOn29))) AS ?pfsb26) . BIND(URI(CONCAT(STR(?thisSequence), '#position', STR(?thisPositionOn30))) AS ?pfse27) . FILTER ((SUBSTR(?thisSequenceValue, ?thisPositionOn29, 1) = 'F')) . BIND(URI(CONCAT(STR(?this), '#MF_01128a25')) AS ?annotation25) . BIND(?this AS ?pfs24) . } OPTIONAL { ?this up:sequence ?thisSequence . ?thisSequence rdf:value ?thisSequenceValue . ?templateMotifMatch297 faldo:location ?templateMotifSequenceMatchRegionP37019298 ; edam:is_output_of ?templateMotifSequenceProfileAlignmentOperationP37019300 ; rdf:type edam:data_0869 ; rdf:value ?templateMotifCigarP37019MF_01128293 . ?templateMotifSequenceMatchRegionP37019298 faldo:begin ?templateMotifSequenceMatchBeginP37019299 . ?templateMotifSequenceMatchBeginP37019299 faldo:position ?templateMotifSequenceMatchBeginPositionP37019294 ; faldo:reference isoform:P37019-1 . ?templateMotifSequenceProfileAlignmentOperationP37019300 edam:has_input signature:MF_01128 ; rdf:type edam:operation_0300 . ?targetMotifMatch301 faldo:location ?targetMotifMatchRegionMatch302 ; edam:is_output_of ?targetMotifSequenceAlignmentOperationMF_01128304 ; rdf:type edam:data_0869 ; rdf:value ?targetMotifMatchCigarP37019MF_01128295 . ?targetMotifMatchRegionMatch302 faldo:begin ?targetMotifMatchRegionMatchBeginMF_01128303 . ?targetMotifMatchRegionMatchBeginMF_01128303 faldo:position ?targetMotifMatchRegionMatchBeginPositionMF_01128296 ; faldo:reference ?thisSequence . ?targetMotifSequenceAlignmentOperationMF_01128304 edam:has_input signature:MF_01128 ; rdf:type edam:operation_0300 . BIND(STRLEN(REPLACE(SUBSTR(?templateMotifCigarP37019MF_01128293, 1, (STRLEN(?templateMotifCigarP37019MF_01128293) - STRLEN(REPLACE(?templateMotifCigarP37019MF_01128293, CONCAT('^(?:-*[^-]){', STR(((445 - ?templateMotifSequenceMatchBeginPositionP37019294) + 1)), '}'), '')))), '[a-z]', '')) AS ?step1305) . BIND((STRLEN(SUBSTR(?targetMotifMatchCigarP37019MF_01128295, 1, (STRLEN(?targetMotifMatchCigarP37019MF_01128295) - STRLEN(REPLACE(?targetMotifMatchCigarP37019MF_01128295, CONCAT('^(?:[a-z]*(?:[A-Z]|-)){', STR(?step1305), '}'), ''))))) - STRLEN(REPLACE(SUBSTR(?targetMotifMatchCigarP37019MF_01128295, 1, (STRLEN(?targetMotifMatchCigarP37019MF_01128295) - STRLEN(REPLACE(?targetMotifMatchCigarP37019MF_01128295, CONCAT('^(?:[a-z]*(?:[A-Z]|-)){', STR(?step1305), '}'), '')))), '[^-]', ''))) AS ?step2306) . BIND(((?step2306 + ?targetMotifMatchRegionMatchBeginPositionMF_01128296) - 1) AS ?thisPositionOn36) . BIND(?thisPositionOn36 AS ?thisPositionOn37) . BIND(?this AS ?pfs1t307) . BIND(URI(CONCAT(STR(?thisSequence), '#position', STR(?thisPositionOn36))) AS ?pfsb33) . BIND(URI(CONCAT(STR(?thisSequence), '#position', STR(?thisPositionOn37))) AS ?pfse34) . FILTER ((SUBSTR(?thisSequenceValue, ?thisPositionOn36, 1) = 'Y')) . BIND(URI(CONCAT(STR(?this), '#MF_01128a32')) AS ?annotation32) . BIND(?this AS ?pfs31) . } OPTIONAL { ?this up:sequence ?thisSequence . ?thisSequence rdf:value ?thisSequenceValue . ?templateMotifMatch312 faldo:location ?templateMotifSequenceMatchRegionP37019313 ; edam:is_output_of ?templateMotifSequenceProfileAlignmentOperationP37019315 ; rdf:type edam:data_0869 ; rdf:value ?templateMotifCigarP37019MF_01128308 . ?templateMotifSequenceMatchRegionP37019313 faldo:begin ?templateMotifSequenceMatchBeginP37019314 . ?templateMotifSequenceMatchBeginP37019314 faldo:position ?templateMotifSequenceMatchBeginPositionP37019309 ; faldo:reference isoform:P37019-1 . ?templateMotifSequenceProfileAlignmentOperationP37019315 edam:has_input signature:MF_01128 ; rdf:type edam:operation_0300 . ?targetMotifMatch316 faldo:location ?targetMotifMatchRegionMatch317 ; edam:is_output_of ?targetMotifSequenceAlignmentOperationMF_01128319 ; rdf:type edam:data_0869 ; rdf:value ?targetMotifMatchCigarP37019MF_01128310 . ?targetMotifMatchRegionMatch317 faldo:begin ?targetMotifMatchRegionMatchBeginMF_01128318 . ?targetMotifMatchRegionMatchBeginMF_01128318 faldo:position ?targetMotifMatchRegionMatchBeginPositionMF_01128311 ; faldo:reference ?thisSequence . ?targetMotifSequenceAlignmentOperationMF_01128319 edam:has_input signature:MF_01128 ; rdf:type edam:operation_0300 . BIND(STRLEN(REPLACE(SUBSTR(?templateMotifCigarP37019MF_01128308, 1, (STRLEN(?templateMotifCigarP37019MF_01128308) - STRLEN(REPLACE(?templateMotifCigarP37019MF_01128308, CONCAT('^(?:-*[^-]){', STR(((148 - ?templateMotifSequenceMatchBeginPositionP37019309) + 1)), '}'), '')))), '[a-z]', '')) AS ?step1320) . BIND((STRLEN(SUBSTR(?targetMotifMatchCigarP37019MF_01128310, 1, (STRLEN(?targetMotifMatchCigarP37019MF_01128310) - STRLEN(REPLACE(?targetMotifMatchCigarP37019MF_01128310, CONCAT('^(?:[a-z]*(?:[A-Z]|-)){', STR(?step1320), '}'), ''))))) - STRLEN(REPLACE(SUBSTR(?targetMotifMatchCigarP37019MF_01128310, 1, (STRLEN(?targetMotifMatchCigarP37019MF_01128310) - STRLEN(REPLACE(?targetMotifMatchCigarP37019MF_01128310, CONCAT('^(?:[a-z]*(?:[A-Z]|-)){', STR(?step1320), '}'), '')))), '[^-]', ''))) AS ?step2321) . BIND(((?step2321 + ?targetMotifMatchRegionMatchBeginPositionMF_01128311) - 1) AS ?thisPositionOn42) . BIND(?thisPositionOn42 AS ?thisPositionOn43) . BIND(?this AS ?pfs1t322) . BIND(URI(CONCAT(STR(?thisSequence), '#position', STR(?thisPositionOn42))) AS ?pfsb40) . BIND(URI(CONCAT(STR(?thisSequence), '#position', STR(?thisPositionOn43))) AS ?pfse41) . FILTER ((SUBSTR(?thisSequenceValue, ?thisPositionOn42, 1) = 'E')) . BIND(URI(CONCAT(STR(?this), '#MF_01128a39')) AS ?annotation39) . BIND(?this AS ?pfs38) . } OPTIONAL { ?this up:sequence ?thisSequence . ?thisSequence rdf:value ?thisSequenceValue . ?templateMotifMatch327 faldo:location ?templateMotifSequenceMatchRegionP37019328 ; edam:is_output_of ?templateMotifSequenceProfileAlignmentOperationP37019330 ; rdf:type edam:data_0869 ; rdf:value ?templateMotifCigarP37019MF_01128323 . ?templateMotifSequenceMatchRegionP37019328 faldo:begin ?templateMotifSequenceMatchBeginP37019329 . ?templateMotifSequenceMatchBeginP37019329 faldo:position ?templateMotifSequenceMatchBeginPositionP37019324 ; faldo:reference isoform:P37019-1 . ?templateMotifSequenceProfileAlignmentOperationP37019330 edam:has_input signature:MF_01128 ; rdf:type edam:operation_0300 . ?targetMotifMatch331 faldo:location ?targetMotifMatchRegionMatch332 ; edam:is_output_of ?targetMotifSequenceAlignmentOperationMF_01128334 ; rdf:type edam:data_0869 ; rdf:value ?targetMotifMatchCigarP37019MF_01128325 . ?targetMotifMatchRegionMatch332 faldo:begin ?targetMotifMatchRegionMatchBeginMF_01128333 . ?targetMotifMatchRegionMatchBeginMF_01128333 faldo:position ?targetMotifMatchRegionMatchBeginPositionMF_01128326 ; faldo:reference ?thisSequence . ?targetMotifSequenceAlignmentOperationMF_01128334 edam:has_input signature:MF_01128 ; rdf:type edam:operation_0300 . BIND(STRLEN(REPLACE(SUBSTR(?templateMotifCigarP37019MF_01128323, 1, (STRLEN(?templateMotifCigarP37019MF_01128323) - STRLEN(REPLACE(?templateMotifCigarP37019MF_01128323, CONCAT('^(?:-*[^-]){', STR(((203 - ?templateMotifSequenceMatchBeginPositionP37019324) + 1)), '}'), '')))), '[a-z]', '')) AS ?step1335) . BIND((STRLEN(SUBSTR(?targetMotifMatchCigarP37019MF_01128325, 1, (STRLEN(?targetMotifMatchCigarP37019MF_01128325) - STRLEN(REPLACE(?targetMotifMatchCigarP37019MF_01128325, CONCAT('^(?:[a-z]*(?:[A-Z]|-)){', STR(?step1335), '}'), ''))))) - STRLEN(REPLACE(SUBSTR(?targetMotifMatchCigarP37019MF_01128325, 1, (STRLEN(?targetMotifMatchCigarP37019MF_01128325) - STRLEN(REPLACE(?targetMotifMatchCigarP37019MF_01128325, CONCAT('^(?:[a-z]*(?:[A-Z]|-)){', STR(?step1335), '}'), '')))), '[^-]', ''))) AS ?step2336) . BIND(((?step2336 + ?targetMotifMatchRegionMatchBeginPositionMF_01128326) - 1) AS ?thisPositionOn48) . BIND(?thisPositionOn48 AS ?thisPositionOn49) . BIND(?this AS ?pfs1t337) . BIND(URI(CONCAT(STR(?thisSequence), '#position', STR(?thisPositionOn48))) AS ?pfsb46) . BIND(URI(CONCAT(STR(?thisSequence), '#position', STR(?thisPositionOn49))) AS ?pfse47) . FILTER ((SUBSTR(?thisSequenceValue, ?thisPositionOn48, 1) = 'E')) . BIND(URI(CONCAT(STR(?this), '#MF_01128a45')) AS ?annotation45) . BIND(?this AS ?pfs44) . } OPTIONAL { ?this up:sequence ?thisSequence . ?thisSequence rdf:value ?thisSequenceValue . ?templateMotifMatch343 faldo:location ?templateMotifSequenceMatchRegionP37019344 ; edam:is_output_of ?templateMotifSequenceProfileAlignmentOperationP37019346 ; rdf:type edam:data_0869 ; rdf:value ?templateMotifCigarP37019MF_01128339 . ?templateMotifSequenceMatchRegionP37019344 faldo:begin ?templateMotifSequenceMatchBeginP37019345 . ?templateMotifSequenceMatchBeginP37019345 faldo:position ?templateMotifSequenceMatchBeginPositionP37019340 ; faldo:reference isoform:P37019-1 . ?templateMotifSequenceProfileAlignmentOperationP37019346 edam:has_input signature:MF_01128 ; rdf:type edam:operation_0300 . ?targetMotifMatch347 faldo:location ?targetMotifMatchRegionMatch348 ; edam:is_output_of ?targetMotifSequenceAlignmentOperationMF_01128350 ; rdf:type edam:data_0869 ; rdf:value ?targetMotifMatchCigarP37019MF_01128341 . ?targetMotifMatchRegionMatch348 faldo:begin ?targetMotifMatchRegionMatchBeginMF_01128349 . ?targetMotifMatchRegionMatchBeginMF_01128349 faldo:position ?targetMotifMatchRegionMatchBeginPositionMF_01128342 ; faldo:reference ?thisSequence . ?targetMotifSequenceAlignmentOperationMF_01128350 edam:has_input signature:MF_01128 ; rdf:type edam:operation_0300 . { ?this up:proteome <http://purl.uniprot.org/proteomes/Membrane#2>. } UNION { ?this up:proteome ?p338 . ?p338 skos:narrower <http://purl.uniprot.org/proteomes/Membrane#2>. } BIND(1 AS ?thisPositionOn54) . BIND(STRLEN(REPLACE(SUBSTR(?templateMotifCigarP37019MF_01128339, 1, (STRLEN(?templateMotifCigarP37019MF_01128339) - STRLEN(REPLACE(?templateMotifCigarP37019MF_01128339, CONCAT('^(?:-*[^-]){', STR(((32 - ?templateMotifSequenceMatchBeginPositionP37019340) + 1)), '}'), '')))), '[a-z]', '')) AS ?step1351) . BIND((STRLEN(SUBSTR(?targetMotifMatchCigarP37019MF_01128341, 1, (STRLEN(?targetMotifMatchCigarP37019MF_01128341) - STRLEN(REPLACE(?targetMotifMatchCigarP37019MF_01128341, CONCAT('^(?:[a-z]*(?:[A-Z]|-)){', STR(?step1351), '}'), ''))))) - STRLEN(REPLACE(SUBSTR(?targetMotifMatchCigarP37019MF_01128341, 1, (STRLEN(?targetMotifMatchCigarP37019MF_01128341) - STRLEN(REPLACE(?targetMotifMatchCigarP37019MF_01128341, CONCAT('^(?:[a-z]*(?:[A-Z]|-)){', STR(?step1351), '}'), '')))), '[^-]', ''))) AS ?step2352) . BIND(((?step2352 + ?targetMotifMatchRegionMatchBeginPositionMF_01128342) - 1) AS ?thisPositionOn55) . BIND(?this AS ?pfs2t353) . BIND(URI(CONCAT(STR(?thisSequence), '#position', STR(?thisPositionOn54))) AS ?pfsb52) . BIND(URI(CONCAT(STR(?thisSequence), '#position', STR(?thisPositionOn55))) AS ?pfse53) . FILTER ((BOUND(?thisPositionOn54) && BOUND(?thisPositionOn55))) . BIND(URI(CONCAT(STR(?this), '#MF_01128a51')) AS ?annotation51) . BIND(?this AS ?pfs50) . } OPTIONAL { ?this up:sequence ?thisSequence . ?thisSequence rdf:value ?thisSequenceValue . ?templateMotifMatch359 faldo:location ?templateMotifSequenceMatchRegionP37019360 ; edam:is_output_of ?templateMotifSequenceProfileAlignmentOperationP37019362 ; rdf:type edam:data_0869 ; rdf:value ?templateMotifCigarP37019MF_01128355 . ?templateMotifSequenceMatchRegionP37019360 faldo:begin ?templateMotifSequenceMatchBeginP37019361 . ?templateMotifSequenceMatchBeginP37019361 faldo:position ?templateMotifSequenceMatchBeginPositionP37019356 ; faldo:reference isoform:P37019-1 . ?templateMotifSequenceProfileAlignmentOperationP37019362 edam:has_input signature:MF_01128 ; rdf:type edam:operation_0300 . ?targetMotifMatch363 faldo:location ?targetMotifMatchRegionMatch364 ; edam:is_output_of ?targetMotifSequenceAlignmentOperationMF_01128366 ; rdf:type edam:data_0869 ; rdf:value ?targetMotifMatchCigarP37019MF_01128357 . ?targetMotifMatchRegionMatch364 faldo:begin ?targetMotifMatchRegionMatchBeginMF_01128365 . ?targetMotifMatchRegionMatchBeginMF_01128365 faldo:position ?targetMotifMatchRegionMatchBeginPositionMF_01128358 ; faldo:reference ?thisSequence . ?targetMotifSequenceAlignmentOperationMF_01128366 edam:has_input signature:MF_01128 ; rdf:type edam:operation_0300 . { ?this up:proteome <http://purl.uniprot.org/proteomes/Membrane#2>. } UNION { ?this up:proteome ?p354 . ?p354 skos:narrower <http://purl.uniprot.org/proteomes/Membrane#2>. } BIND(STRLEN(REPLACE(SUBSTR(?templateMotifCigarP37019MF_01128355, 1, (STRLEN(?templateMotifCigarP37019MF_01128355) - STRLEN(REPLACE(?templateMotifCigarP37019MF_01128355, CONCAT('^(?:-*[^-]){', STR(((33 - ?templateMotifSequenceMatchBeginPositionP37019356) + 1)), '}'), '')))), '[a-z]', '')) AS ?step1367) . BIND((STRLEN(SUBSTR(?targetMotifMatchCigarP37019MF_01128357, 1, (STRLEN(?targetMotifMatchCigarP37019MF_01128357) - STRLEN(REPLACE(?targetMotifMatchCigarP37019MF_01128357, CONCAT('^(?:[a-z]*(?:[A-Z]|-)){', STR(?step1367), '}'), ''))))) - STRLEN(REPLACE(SUBSTR(?targetMotifMatchCigarP37019MF_01128357, 1, (STRLEN(?targetMotifMatchCigarP37019MF_01128357) - STRLEN(REPLACE(?targetMotifMatchCigarP37019MF_01128357, CONCAT('^(?:[a-z]*(?:[A-Z]|-)){', STR(?step1367), '}'), '')))), '[^-]', ''))) AS ?step2368) . BIND(((?step2368 + ?targetMotifMatchRegionMatchBeginPositionMF_01128358) - 1) AS ?thisPositionOn60) . BIND(STRLEN(REPLACE(SUBSTR(?templateMotifCigarP37019MF_01128355, 1, (STRLEN(?templateMotifCigarP37019MF_01128355) - STRLEN(REPLACE(?templateMotifCigarP37019MF_01128355, CONCAT('^(?:-*[^-]){', STR(((69 - ?templateMotifSequenceMatchBeginPositionP37019356) + 1)), '}'), '')))), '[a-z]', '')) AS ?step1369) . BIND((STRLEN(SUBSTR(?targetMotifMatchCigarP37019MF_01128357, 1, (STRLEN(?targetMotifMatchCigarP37019MF_01128357) - STRLEN(REPLACE(?targetMotifMatchCigarP37019MF_01128357, CONCAT('^(?:[a-z]*(?:[A-Z]|-)){', STR(?step1369), '}'), ''))))) - STRLEN(REPLACE(SUBSTR(?targetMotifMatchCigarP37019MF_01128357, 1, (STRLEN(?targetMotifMatchCigarP37019MF_01128357) - STRLEN(REPLACE(?targetMotifMatchCigarP37019MF_01128357, CONCAT('^(?:[a-z]*(?:[A-Z]|-)){', STR(?step1369), '}'), '')))), '[^-]', ''))) AS ?step2370) . BIND(((?step2370 + ?targetMotifMatchRegionMatchBeginPositionMF_01128358) - 1) AS ?thisPositionOn61) . BIND(?this AS ?pfs2t371) . BIND(URI(CONCAT(STR(?thisSequence), '#position', STR(?thisPositionOn60))) AS ?pfsb58) . BIND(URI(CONCAT(STR(?thisSequence), '#position', STR(?thisPositionOn61))) AS ?pfse59) . FILTER ((BOUND(?thisPositionOn60) && BOUND(?thisPositionOn61))) . BIND(URI(CONCAT(STR(?this), '#MF_01128a57')) AS ?annotation57) . BIND(?this AS ?pfs56) . } OPTIONAL { ?this up:sequence ?thisSequence . ?thisSequence rdf:value ?thisSequenceValue . ?templateMotifMatch377 faldo:location ?templateMotifSequenceMatchRegionP37019378 ; edam:is_output_of ?templateMotifSequenceProfileAlignmentOperationP37019380 ; rdf:type edam:data_0869 ; rdf:value ?templateMotifCigarP37019MF_01128373 . ?templateMotifSequenceMatchRegionP37019378 faldo:begin ?templateMotifSequenceMatchBeginP37019379 . ?templateMotifSequenceMatchBeginP37019379 faldo:position ?templateMotifSequenceMatchBeginPositionP37019374 ; faldo:reference isoform:P37019-1 . ?templateMotifSequenceProfileAlignmentOperationP37019380 edam:has_input signature:MF_01128 ; rdf:type edam:operation_0300 . ?targetMotifMatch381 faldo:location ?targetMotifMatchRegionMatch382 ; edam:is_output_of ?targetMotifSequenceAlignmentOperationMF_01128384 ; rdf:type edam:data_0869 ; rdf:value ?targetMotifMatchCigarP37019MF_01128375 . ?targetMotifMatchRegionMatch382 faldo:begin ?targetMotifMatchRegionMatchBeginMF_01128383 . ?targetMotifMatchRegionMatchBeginMF_01128383 faldo:position ?targetMotifMatchRegionMatchBeginPositionMF_01128376 ; faldo:reference ?thisSequence . ?targetMotifSequenceAlignmentOperationMF_01128384 edam:has_input signature:MF_01128 ; rdf:type edam:operation_0300 . { ?this up:proteome <http://purl.uniprot.org/proteomes/Membrane#2>. } UNION { ?this up:proteome ?p372 . ?p372 skos:narrower <http://purl.uniprot.org/proteomes/Membrane#2>. } BIND(STRLEN(REPLACE(SUBSTR(?templateMotifCigarP37019MF_01128373, 1, (STRLEN(?templateMotifCigarP37019MF_01128373) - STRLEN(REPLACE(?templateMotifCigarP37019MF_01128373, CONCAT('^(?:-*[^-]){', STR(((70 - ?templateMotifSequenceMatchBeginPositionP37019374) + 1)), '}'), '')))), '[a-z]', '')) AS ?step1385) . BIND((STRLEN(SUBSTR(?targetMotifMatchCigarP37019MF_01128375, 1, (STRLEN(?targetMotifMatchCigarP37019MF_01128375) - STRLEN(REPLACE(?targetMotifMatchCigarP37019MF_01128375, CONCAT('^(?:[a-z]*(?:[A-Z]|-)){', STR(?step1385), '}'), ''))))) - STRLEN(REPLACE(SUBSTR(?targetMotifMatchCigarP37019MF_01128375, 1, (STRLEN(?targetMotifMatchCigarP37019MF_01128375) - STRLEN(REPLACE(?targetMotifMatchCigarP37019MF_01128375, CONCAT('^(?:[a-z]*(?:[A-Z]|-)){', STR(?step1385), '}'), '')))), '[^-]', ''))) AS ?step2386) . BIND(((?step2386 + ?targetMotifMatchRegionMatchBeginPositionMF_01128376) - 1) AS ?thisPositionOn66) . BIND(STRLEN(REPLACE(SUBSTR(?templateMotifCigarP37019MF_01128373, 1, (STRLEN(?templateMotifCigarP37019MF_01128373) - STRLEN(REPLACE(?templateMotifCigarP37019MF_01128373, CONCAT('^(?:-*[^-]){', STR(((76 - ?templateMotifSequenceMatchBeginPositionP37019374) + 1)), '}'), '')))), '[a-z]', '')) AS ?step1387) . BIND((STRLEN(SUBSTR(?targetMotifMatchCigarP37019MF_01128375, 1, (STRLEN(?targetMotifMatchCigarP37019MF_01128375) - STRLEN(REPLACE(?targetMotifMatchCigarP37019MF_01128375, CONCAT('^(?:[a-z]*(?:[A-Z]|-)){', STR(?step1387), '}'), ''))))) - STRLEN(REPLACE(SUBSTR(?targetMotifMatchCigarP37019MF_01128375, 1, (STRLEN(?targetMotifMatchCigarP37019MF_01128375) - STRLEN(REPLACE(?targetMotifMatchCigarP37019MF_01128375, CONCAT('^(?:[a-z]*(?:[A-Z]|-)){', STR(?step1387), '}'), '')))), '[^-]', ''))) AS ?step2388) . BIND(((?step2388 + ?targetMotifMatchRegionMatchBeginPositionMF_01128376) - 1) AS ?thisPositionOn67) . BIND(?this AS ?pfs2t389) . BIND(URI(CONCAT(STR(?thisSequence), '#position', STR(?thisPositionOn66))) AS ?pfsb64) . BIND(URI(CONCAT(STR(?thisSequence), '#position', STR(?thisPositionOn67))) AS ?pfse65) . FILTER ((BOUND(?thisPositionOn66) && BOUND(?thisPositionOn67))) . BIND(URI(CONCAT(STR(?this), '#MF_01128a63')) AS ?annotation63) . BIND(?this AS ?pfs62) . } OPTIONAL { ?this up:sequence ?thisSequence . ?thisSequence rdf:value ?thisSequenceValue . ?templateMotifMatch395 faldo:location ?templateMotifSequenceMatchRegionP37019396 ; edam:is_output_of ?templateMotifSequenceProfileAlignmentOperationP37019398 ; rdf:type edam:data_0869 ; rdf:value ?templateMotifCigarP37019MF_01128391 . ?templateMotifSequenceMatchRegionP37019396 faldo:begin ?templateMotifSequenceMatchBeginP37019397 . ?templateMotifSequenceMatchBeginP37019397 faldo:position ?templateMotifSequenceMatchBeginPositionP37019392 ; faldo:reference isoform:P37019-1 . ?templateMotifSequenceProfileAlignmentOperationP37019398 edam:has_input signature:MF_01128 ; rdf:type edam:operation_0300 . ?targetMotifMatch399 faldo:location ?targetMotifMatchRegionMatch400 ; edam:is_output_of ?targetMotifSequenceAlignmentOperationMF_01128402 ; rdf:type edam:data_0869 ; rdf:value ?targetMotifMatchCigarP37019MF_01128393 . ?targetMotifMatchRegionMatch400 faldo:begin ?targetMotifMatchRegionMatchBeginMF_01128401 . ?targetMotifMatchRegionMatchBeginMF_01128401 faldo:position ?targetMotifMatchRegionMatchBeginPositionMF_01128394 ; faldo:reference ?thisSequence . ?targetMotifSequenceAlignmentOperationMF_01128402 edam:has_input signature:MF_01128 ; rdf:type edam:operation_0300 . { ?this up:proteome <http://purl.uniprot.org/proteomes/Membrane#2>. } UNION { ?this up:proteome ?p390 . ?p390 skos:narrower <http://purl.uniprot.org/proteomes/Membrane#2>. } BIND(STRLEN(REPLACE(SUBSTR(?templateMotifCigarP37019MF_01128391, 1, (STRLEN(?templateMotifCigarP37019MF_01128391) - STRLEN(REPLACE(?templateMotifCigarP37019MF_01128391, CONCAT('^(?:-*[^-]){', STR(((77 - ?templateMotifSequenceMatchBeginPositionP37019392) + 1)), '}'), '')))), '[a-z]', '')) AS ?step1403) . BIND((STRLEN(SUBSTR(?targetMotifMatchCigarP37019MF_01128393, 1, (STRLEN(?targetMotifMatchCigarP37019MF_01128393) - STRLEN(REPLACE(?targetMotifMatchCigarP37019MF_01128393, CONCAT('^(?:[a-z]*(?:[A-Z]|-)){', STR(?step1403), '}'), ''))))) - STRLEN(REPLACE(SUBSTR(?targetMotifMatchCigarP37019MF_01128393, 1, (STRLEN(?targetMotifMatchCigarP37019MF_01128393) - STRLEN(REPLACE(?targetMotifMatchCigarP37019MF_01128393, CONCAT('^(?:[a-z]*(?:[A-Z]|-)){', STR(?step1403), '}'), '')))), '[^-]', ''))) AS ?step2404) . BIND(((?step2404 + ?targetMotifMatchRegionMatchBeginPositionMF_01128394) - 1) AS ?thisPositionOn72) . BIND(STRLEN(REPLACE(SUBSTR(?templateMotifCigarP37019MF_01128391, 1, (STRLEN(?templateMotifCigarP37019MF_01128391) - STRLEN(REPLACE(?templateMotifCigarP37019MF_01128391, CONCAT('^(?:-*[^-]){', STR(((100 - ?templateMotifSequenceMatchBeginPositionP37019392) + 1)), '}'), '')))), '[a-z]', '')) AS ?step1405) . BIND((STRLEN(SUBSTR(?targetMotifMatchCigarP37019MF_01128393, 1, (STRLEN(?targetMotifMatchCigarP37019MF_01128393) - STRLEN(REPLACE(?targetMotifMatchCigarP37019MF_01128393, CONCAT('^(?:[a-z]*(?:[A-Z]|-)){', STR(?step1405), '}'), ''))))) - STRLEN(REPLACE(SUBSTR(?targetMotifMatchCigarP37019MF_01128393, 1, (STRLEN(?targetMotifMatchCigarP37019MF_01128393) - STRLEN(REPLACE(?targetMotifMatchCigarP37019MF_01128393, CONCAT('^(?:[a-z]*(?:[A-Z]|-)){', STR(?step1405), '}'), '')))), '[^-]', ''))) AS ?step2406) . BIND(((?step2406 + ?targetMotifMatchRegionMatchBeginPositionMF_01128394) - 1) AS ?thisPositionOn73) . BIND(?this AS ?pfs2t407) . BIND(URI(CONCAT(STR(?thisSequence), '#position', STR(?thisPositionOn72))) AS ?pfsb70) . BIND(URI(CONCAT(STR(?thisSequence), '#position', STR(?thisPositionOn73))) AS ?pfse71) . FILTER ((BOUND(?thisPositionOn72) && BOUND(?thisPositionOn73))) . BIND(URI(CONCAT(STR(?this), '#MF_01128a69')) AS ?annotation69) . BIND(?this AS ?pfs68) . } OPTIONAL { ?this up:sequence ?thisSequence . ?thisSequence rdf:value ?thisSequenceValue . ?templateMotifMatch413 faldo:location ?templateMotifSequenceMatchRegionP37019414 ; edam:is_output_of ?templateMotifSequenceProfileAlignmentOperationP37019416 ; rdf:type edam:data_0869 ; rdf:value ?templateMotifCigarP37019MF_01128409 . ?templateMotifSequenceMatchRegionP37019414 faldo:begin ?templateMotifSequenceMatchBeginP37019415 . ?templateMotifSequenceMatchBeginP37019415 faldo:position ?templateMotifSequenceMatchBeginPositionP37019410 ; faldo:reference isoform:P37019-1 . ?templateMotifSequenceProfileAlignmentOperationP37019416 edam:has_input signature:MF_01128 ; rdf:type edam:operation_0300 . ?targetMotifMatch417 faldo:location ?targetMotifMatchRegionMatch418 ; edam:is_output_of ?targetMotifSequenceAlignmentOperationMF_01128420 ; rdf:type edam:data_0869 ; rdf:value ?targetMotifMatchCigarP37019MF_01128411 . ?targetMotifMatchRegionMatch418 faldo:begin ?targetMotifMatchRegionMatchBeginMF_01128419 . ?targetMotifMatchRegionMatchBeginMF_01128419 faldo:position ?targetMotifMatchRegionMatchBeginPositionMF_01128412 ; faldo:reference ?thisSequence . ?targetMotifSequenceAlignmentOperationMF_01128420 edam:has_input signature:MF_01128 ; rdf:type edam:operation_0300 . { ?this up:proteome <http://purl.uniprot.org/proteomes/Membrane#2>. } UNION { ?this up:proteome ?p408 . ?p408 skos:narrower <http://purl.uniprot.org/proteomes/Membrane#2>. } BIND(STRLEN(REPLACE(SUBSTR(?templateMotifCigarP37019MF_01128409, 1, (STRLEN(?templateMotifCigarP37019MF_01128409) - STRLEN(REPLACE(?templateMotifCigarP37019MF_01128409, CONCAT('^(?:-*[^-]){', STR(((109 - ?templateMotifSequenceMatchBeginPositionP37019410) + 1)), '}'), '')))), '[a-z]', '')) AS ?step1421) . BIND((STRLEN(SUBSTR(?targetMotifMatchCigarP37019MF_01128411, 1, (STRLEN(?targetMotifMatchCigarP37019MF_01128411) - STRLEN(REPLACE(?targetMotifMatchCigarP37019MF_01128411, CONCAT('^(?:[a-z]*(?:[A-Z]|-)){', STR(?step1421), '}'), ''))))) - STRLEN(REPLACE(SUBSTR(?targetMotifMatchCigarP37019MF_01128411, 1, (STRLEN(?targetMotifMatchCigarP37019MF_01128411) - STRLEN(REPLACE(?targetMotifMatchCigarP37019MF_01128411, CONCAT('^(?:[a-z]*(?:[A-Z]|-)){', STR(?step1421), '}'), '')))), '[^-]', ''))) AS ?step2422) . BIND(((?step2422 + ?targetMotifMatchRegionMatchBeginPositionMF_01128412) - 1) AS ?thisPositionOn78) . BIND(STRLEN(REPLACE(SUBSTR(?templateMotifCigarP37019MF_01128409, 1, (STRLEN(?templateMotifCigarP37019MF_01128409) - STRLEN(REPLACE(?templateMotifCigarP37019MF_01128409, CONCAT('^(?:-*[^-]){', STR(((116 - ?templateMotifSequenceMatchBeginPositionP37019410) + 1)), '}'), '')))), '[a-z]', '')) AS ?step1423) . BIND((STRLEN(SUBSTR(?targetMotifMatchCigarP37019MF_01128411, 1, (STRLEN(?targetMotifMatchCigarP37019MF_01128411) - STRLEN(REPLACE(?targetMotifMatchCigarP37019MF_01128411, CONCAT('^(?:[a-z]*(?:[A-Z]|-)){', STR(?step1423), '}'), ''))))) - STRLEN(REPLACE(SUBSTR(?targetMotifMatchCigarP37019MF_01128411, 1, (STRLEN(?targetMotifMatchCigarP37019MF_01128411) - STRLEN(REPLACE(?targetMotifMatchCigarP37019MF_01128411, CONCAT('^(?:[a-z]*(?:[A-Z]|-)){', STR(?step1423), '}'), '')))), '[^-]', ''))) AS ?step2424) . BIND(((?step2424 + ?targetMotifMatchRegionMatchBeginPositionMF_01128412) - 1) AS ?thisPositionOn79) . BIND(?this AS ?pfs2t425) . BIND(URI(CONCAT(STR(?thisSequence), '#position', STR(?thisPositionOn78))) AS ?pfsb76) . BIND(URI(CONCAT(STR(?thisSequence), '#position', STR(?thisPositionOn79))) AS ?pfse77) . FILTER ((BOUND(?thisPositionOn78) && BOUND(?thisPositionOn79))) . BIND(URI(CONCAT(STR(?this), '#MF_01128a75')) AS ?annotation75) . BIND(?this AS ?pfs74) . } OPTIONAL { ?this up:sequence ?thisSequence . ?thisSequence rdf:value ?thisSequenceValue . ?templateMotifMatch431 faldo:location ?templateMotifSequenceMatchRegionP37019432 ; edam:is_output_of ?templateMotifSequenceProfileAlignmentOperationP37019434 ; rdf:type edam:data_0869 ; rdf:value ?templateMotifCigarP37019MF_01128427 . ?templateMotifSequenceMatchRegionP37019432 faldo:begin ?templateMotifSequenceMatchBeginP37019433 . ?templateMotifSequenceMatchBeginP37019433 faldo:position ?templateMotifSequenceMatchBeginPositionP37019428 ; faldo:reference isoform:P37019-1 . ?templateMotifSequenceProfileAlignmentOperationP37019434 edam:has_input signature:MF_01128 ; rdf:type edam:operation_0300 . ?targetMotifMatch435 faldo:location ?targetMotifMatchRegionMatch436 ; edam:is_output_of ?targetMotifSequenceAlignmentOperationMF_01128438 ; rdf:type edam:data_0869 ; rdf:value ?targetMotifMatchCigarP37019MF_01128429 . ?targetMotifMatchRegionMatch436 faldo:begin ?targetMotifMatchRegionMatchBeginMF_01128437 . ?targetMotifMatchRegionMatchBeginMF_01128437 faldo:position ?targetMotifMatchRegionMatchBeginPositionMF_01128430 ; faldo:reference ?thisSequence . ?targetMotifSequenceAlignmentOperationMF_01128438 edam:has_input signature:MF_01128 ; rdf:type edam:operation_0300 . { ?this up:proteome <http://purl.uniprot.org/proteomes/Membrane#2>. } UNION { ?this up:proteome ?p426 . ?p426 skos:narrower <http://purl.uniprot.org/proteomes/Membrane#2>. } BIND(STRLEN(REPLACE(SUBSTR(?templateMotifCigarP37019MF_01128427, 1, (STRLEN(?templateMotifCigarP37019MF_01128427) - STRLEN(REPLACE(?templateMotifCigarP37019MF_01128427, CONCAT('^(?:-*[^-]){', STR(((117 - ?templateMotifSequenceMatchBeginPositionP37019428) + 1)), '}'), '')))), '[a-z]', '')) AS ?step1439) . BIND((STRLEN(SUBSTR(?targetMotifMatchCigarP37019MF_01128429, 1, (STRLEN(?targetMotifMatchCigarP37019MF_01128429) - STRLEN(REPLACE(?targetMotifMatchCigarP37019MF_01128429, CONCAT('^(?:[a-z]*(?:[A-Z]|-)){', STR(?step1439), '}'), ''))))) - STRLEN(REPLACE(SUBSTR(?targetMotifMatchCigarP37019MF_01128429, 1, (STRLEN(?targetMotifMatchCigarP37019MF_01128429) - STRLEN(REPLACE(?targetMotifMatchCigarP37019MF_01128429, CONCAT('^(?:[a-z]*(?:[A-Z]|-)){', STR(?step1439), '}'), '')))), '[^-]', ''))) AS ?step2440) . BIND(((?step2440 + ?targetMotifMatchRegionMatchBeginPositionMF_01128430) - 1) AS ?thisPositionOn84) . BIND(STRLEN(REPLACE(SUBSTR(?templateMotifCigarP37019MF_01128427, 1, (STRLEN(?templateMotifCigarP37019MF_01128427) - STRLEN(REPLACE(?templateMotifCigarP37019MF_01128427, CONCAT('^(?:-*[^-]){', STR(((123 - ?templateMotifSequenceMatchBeginPositionP37019428) + 1)), '}'), '')))), '[a-z]', '')) AS ?step1441) . BIND((STRLEN(SUBSTR(?targetMotifMatchCigarP37019MF_01128429, 1, (STRLEN(?targetMotifMatchCigarP37019MF_01128429) - STRLEN(REPLACE(?targetMotifMatchCigarP37019MF_01128429, CONCAT('^(?:[a-z]*(?:[A-Z]|-)){', STR(?step1441), '}'), ''))))) - STRLEN(REPLACE(SUBSTR(?targetMotifMatchCigarP37019MF_01128429, 1, (STRLEN(?targetMotifMatchCigarP37019MF_01128429) - STRLEN(REPLACE(?targetMotifMatchCigarP37019MF_01128429, CONCAT('^(?:[a-z]*(?:[A-Z]|-)){', STR(?step1441), '}'), '')))), '[^-]', ''))) AS ?step2442) . BIND(((?step2442 + ?targetMotifMatchRegionMatchBeginPositionMF_01128430) - 1) AS ?thisPositionOn85) . BIND(?this AS ?pfs2t443) . BIND(URI(CONCAT(STR(?thisSequence), '#position', STR(?thisPositionOn84))) AS ?pfsb82) . BIND(URI(CONCAT(STR(?thisSequence), '#position', STR(?thisPositionOn85))) AS ?pfse83) . FILTER ((BOUND(?thisPositionOn84) && BOUND(?thisPositionOn85))) . BIND(URI(CONCAT(STR(?this), '#MF_01128a81')) AS ?annotation81) . BIND(?this AS ?pfs80) . } OPTIONAL { ?this up:sequence ?thisSequence . ?thisSequence rdf:value ?thisSequenceValue . ?templateMotifMatch449 faldo:location ?templateMotifSequenceMatchRegionP37019450 ; edam:is_output_of ?templateMotifSequenceProfileAlignmentOperationP37019452 ; rdf:type edam:data_0869 ; rdf:value ?templateMotifCigarP37019MF_01128445 . ?templateMotifSequenceMatchRegionP37019450 faldo:begin ?templateMotifSequenceMatchBeginP37019451 . ?templateMotifSequenceMatchBeginP37019451 faldo:position ?templateMotifSequenceMatchBeginPositionP37019446 ; faldo:reference isoform:P37019-1 . ?templateMotifSequenceProfileAlignmentOperationP37019452 edam:has_input signature:MF_01128 ; rdf:type edam:operation_0300 . ?targetMotifMatch453 faldo:location ?targetMotifMatchRegionMatch454 ; edam:is_output_of ?targetMotifSequenceAlignmentOperationMF_01128456 ; rdf:type edam:data_0869 ; rdf:value ?targetMotifMatchCigarP37019MF_01128447 . ?targetMotifMatchRegionMatch454 faldo:begin ?targetMotifMatchRegionMatchBeginMF_01128455 . ?targetMotifMatchRegionMatchBeginMF_01128455 faldo:position ?targetMotifMatchRegionMatchBeginPositionMF_01128448 ; faldo:reference ?thisSequence . ?targetMotifSequenceAlignmentOperationMF_01128456 edam:has_input signature:MF_01128 ; rdf:type edam:operation_0300 . { ?this up:proteome <http://purl.uniprot.org/proteomes/Membrane#2>. } UNION { ?this up:proteome ?p444 . ?p444 skos:narrower <http://purl.uniprot.org/proteomes/Membrane#2>. } BIND(STRLEN(REPLACE(SUBSTR(?templateMotifCigarP37019MF_01128445, 1, (STRLEN(?templateMotifCigarP37019MF_01128445) - STRLEN(REPLACE(?templateMotifCigarP37019MF_01128445, CONCAT('^(?:-*[^-]){', STR(((124 - ?templateMotifSequenceMatchBeginPositionP37019446) + 1)), '}'), '')))), '[a-z]', '')) AS ?step1457) . BIND((STRLEN(SUBSTR(?targetMotifMatchCigarP37019MF_01128447, 1, (STRLEN(?targetMotifMatchCigarP37019MF_01128447) - STRLEN(REPLACE(?targetMotifMatchCigarP37019MF_01128447, CONCAT('^(?:[a-z]*(?:[A-Z]|-)){', STR(?step1457), '}'), ''))))) - STRLEN(REPLACE(SUBSTR(?targetMotifMatchCigarP37019MF_01128447, 1, (STRLEN(?targetMotifMatchCigarP37019MF_01128447) - STRLEN(REPLACE(?targetMotifMatchCigarP37019MF_01128447, CONCAT('^(?:[a-z]*(?:[A-Z]|-)){', STR(?step1457), '}'), '')))), '[^-]', ''))) AS ?step2458) . BIND(((?step2458 + ?targetMotifMatchRegionMatchBeginPositionMF_01128448) - 1) AS ?thisPositionOn90) . BIND(STRLEN(REPLACE(SUBSTR(?templateMotifCigarP37019MF_01128445, 1, (STRLEN(?templateMotifCigarP37019MF_01128445) - STRLEN(REPLACE(?templateMotifCigarP37019MF_01128445, CONCAT('^(?:-*[^-]){', STR(((141 - ?templateMotifSequenceMatchBeginPositionP37019446) + 1)), '}'), '')))), '[a-z]', '')) AS ?step1459) . BIND((STRLEN(SUBSTR(?targetMotifMatchCigarP37019MF_01128447, 1, (STRLEN(?targetMotifMatchCigarP37019MF_01128447) - STRLEN(REPLACE(?targetMotifMatchCigarP37019MF_01128447, CONCAT('^(?:[a-z]*(?:[A-Z]|-)){', STR(?step1459), '}'), ''))))) - STRLEN(REPLACE(SUBSTR(?targetMotifMatchCigarP37019MF_01128447, 1, (STRLEN(?targetMotifMatchCigarP37019MF_01128447) - STRLEN(REPLACE(?targetMotifMatchCigarP37019MF_01128447, CONCAT('^(?:[a-z]*(?:[A-Z]|-)){', STR(?step1459), '}'), '')))), '[^-]', ''))) AS ?step2460) . BIND(((?step2460 + ?targetMotifMatchRegionMatchBeginPositionMF_01128448) - 1) AS ?thisPositionOn91) . BIND(?this AS ?pfs2t461) . BIND(URI(CONCAT(STR(?thisSequence), '#position', STR(?thisPositionOn90))) AS ?pfsb88) . BIND(URI(CONCAT(STR(?thisSequence), '#position', STR(?thisPositionOn91))) AS ?pfse89) . FILTER ((BOUND(?thisPositionOn90) && BOUND(?thisPositionOn91))) . BIND(URI(CONCAT(STR(?this), '#MF_01128a87')) AS ?annotation87) . BIND(?this AS ?pfs86) . } OPTIONAL { ?this up:sequence ?thisSequence . ?thisSequence rdf:value ?thisSequenceValue . ?templateMotifMatch467 faldo:location ?templateMotifSequenceMatchRegionP37019468 ; edam:is_output_of ?templateMotifSequenceProfileAlignmentOperationP37019470 ; rdf:type edam:data_0869 ; rdf:value ?templateMotifCigarP37019MF_01128463 . ?templateMotifSequenceMatchRegionP37019468 faldo:begin ?templateMotifSequenceMatchBeginP37019469 . ?templateMotifSequenceMatchBeginP37019469 faldo:position ?templateMotifSequenceMatchBeginPositionP37019464 ; faldo:reference isoform:P37019-1 . ?templateMotifSequenceProfileAlignmentOperationP37019470 edam:has_input signature:MF_01128 ; rdf:type edam:operation_0300 . ?targetMotifMatch471 faldo:location ?targetMotifMatchRegionMatch472 ; edam:is_output_of ?targetMotifSequenceAlignmentOperationMF_01128474 ; rdf:type edam:data_0869 ; rdf:value ?targetMotifMatchCigarP37019MF_01128465 . ?targetMotifMatchRegionMatch472 faldo:begin ?targetMotifMatchRegionMatchBeginMF_01128473 . ?targetMotifMatchRegionMatchBeginMF_01128473 faldo:position ?targetMotifMatchRegionMatchBeginPositionMF_01128466 ; faldo:reference ?thisSequence . ?targetMotifSequenceAlignmentOperationMF_01128474 edam:has_input signature:MF_01128 ; rdf:type edam:operation_0300 . { ?this up:proteome <http://purl.uniprot.org/proteomes/Membrane#2>. } UNION { ?this up:proteome ?p462 . ?p462 skos:narrower <http://purl.uniprot.org/proteomes/Membrane#2>. } BIND(STRLEN(REPLACE(SUBSTR(?templateMotifCigarP37019MF_01128463, 1, (STRLEN(?templateMotifCigarP37019MF_01128463) - STRLEN(REPLACE(?templateMotifCigarP37019MF_01128463, CONCAT('^(?:-*[^-]){', STR(((148 - ?templateMotifSequenceMatchBeginPositionP37019464) + 1)), '}'), '')))), '[a-z]', '')) AS ?step1475) . BIND((STRLEN(SUBSTR(?targetMotifMatchCigarP37019MF_01128465, 1, (STRLEN(?targetMotifMatchCigarP37019MF_01128465) - STRLEN(REPLACE(?targetMotifMatchCigarP37019MF_01128465, CONCAT('^(?:[a-z]*(?:[A-Z]|-)){', STR(?step1475), '}'), ''))))) - STRLEN(REPLACE(SUBSTR(?targetMotifMatchCigarP37019MF_01128465, 1, (STRLEN(?targetMotifMatchCigarP37019MF_01128465) - STRLEN(REPLACE(?targetMotifMatchCigarP37019MF_01128465, CONCAT('^(?:[a-z]*(?:[A-Z]|-)){', STR(?step1475), '}'), '')))), '[^-]', ''))) AS ?step2476) . BIND(((?step2476 + ?targetMotifMatchRegionMatchBeginPositionMF_01128466) - 1) AS ?thisPositionOn96) . BIND(STRLEN(REPLACE(SUBSTR(?templateMotifCigarP37019MF_01128463, 1, (STRLEN(?templateMotifCigarP37019MF_01128463) - STRLEN(REPLACE(?templateMotifCigarP37019MF_01128463, CONCAT('^(?:-*[^-]){', STR(((166 - ?templateMotifSequenceMatchBeginPositionP37019464) + 1)), '}'), '')))), '[a-z]', '')) AS ?step1477) . BIND((STRLEN(SUBSTR(?targetMotifMatchCigarP37019MF_01128465, 1, (STRLEN(?targetMotifMatchCigarP37019MF_01128465) - STRLEN(REPLACE(?targetMotifMatchCigarP37019MF_01128465, CONCAT('^(?:[a-z]*(?:[A-Z]|-)){', STR(?step1477), '}'), ''))))) - STRLEN(REPLACE(SUBSTR(?targetMotifMatchCigarP37019MF_01128465, 1, (STRLEN(?targetMotifMatchCigarP37019MF_01128465) - STRLEN(REPLACE(?targetMotifMatchCigarP37019MF_01128465, CONCAT('^(?:[a-z]*(?:[A-Z]|-)){', STR(?step1477), '}'), '')))), '[^-]', ''))) AS ?step2478) . BIND(((?step2478 + ?targetMotifMatchRegionMatchBeginPositionMF_01128466) - 1) AS ?thisPositionOn97) . BIND(?this AS ?pfs2t479) . BIND(URI(CONCAT(STR(?thisSequence), '#position', STR(?thisPositionOn96))) AS ?pfsb94) . BIND(URI(CONCAT(STR(?thisSequence), '#position', STR(?thisPositionOn97))) AS ?pfse95) . FILTER ((BOUND(?thisPositionOn96) && BOUND(?thisPositionOn97))) . BIND(URI(CONCAT(STR(?this), '#MF_01128a93')) AS ?annotation93) . BIND(?this AS ?pfs92) . } OPTIONAL { ?this up:sequence ?thisSequence . ?thisSequence rdf:value ?thisSequenceValue . ?templateMotifMatch485 faldo:location ?templateMotifSequenceMatchRegionP37019486 ; edam:is_output_of ?templateMotifSequenceProfileAlignmentOperationP37019488 ; rdf:type edam:data_0869 ; rdf:value ?templateMotifCigarP37019MF_01128481 . ?templateMotifSequenceMatchRegionP37019486 faldo:begin ?templateMotifSequenceMatchBeginP37019487 . ?templateMotifSequenceMatchBeginP37019487 faldo:position ?templateMotifSequenceMatchBeginPositionP37019482 ; faldo:reference isoform:P37019-1 . ?templateMotifSequenceProfileAlignmentOperationP37019488 edam:has_input signature:MF_01128 ; rdf:type edam:operation_0300 . ?targetMotifMatch489 faldo:location ?targetMotifMatchRegionMatch490 ; edam:is_output_of ?targetMotifSequenceAlignmentOperationMF_01128492 ; rdf:type edam:data_0869 ; rdf:value ?targetMotifMatchCigarP37019MF_01128483 . ?targetMotifMatchRegionMatch490 faldo:begin ?targetMotifMatchRegionMatchBeginMF_01128491 . ?targetMotifMatchRegionMatchBeginMF_01128491 faldo:position ?targetMotifMatchRegionMatchBeginPositionMF_01128484 ; faldo:reference ?thisSequence . ?targetMotifSequenceAlignmentOperationMF_01128492 edam:has_input signature:MF_01128 ; rdf:type edam:operation_0300 . { ?this up:proteome <http://purl.uniprot.org/proteomes/Membrane#2>. } UNION { ?this up:proteome ?p480 . ?p480 skos:narrower <http://purl.uniprot.org/proteomes/Membrane#2>. } BIND(STRLEN(REPLACE(SUBSTR(?templateMotifCigarP37019MF_01128481, 1, (STRLEN(?templateMotifCigarP37019MF_01128481) - STRLEN(REPLACE(?templateMotifCigarP37019MF_01128481, CONCAT('^(?:-*[^-]){', STR(((167 - ?templateMotifSequenceMatchBeginPositionP37019482) + 1)), '}'), '')))), '[a-z]', '')) AS ?step1493) . BIND((STRLEN(SUBSTR(?targetMotifMatchCigarP37019MF_01128483, 1, (STRLEN(?targetMotifMatchCigarP37019MF_01128483) - STRLEN(REPLACE(?targetMotifMatchCigarP37019MF_01128483, CONCAT('^(?:[a-z]*(?:[A-Z]|-)){', STR(?step1493), '}'), ''))))) - STRLEN(REPLACE(SUBSTR(?targetMotifMatchCigarP37019MF_01128483, 1, (STRLEN(?targetMotifMatchCigarP37019MF_01128483) - STRLEN(REPLACE(?targetMotifMatchCigarP37019MF_01128483, CONCAT('^(?:[a-z]*(?:[A-Z]|-)){', STR(?step1493), '}'), '')))), '[^-]', ''))) AS ?step2494) . BIND(((?step2494 + ?targetMotifMatchRegionMatchBeginPositionMF_01128484) - 1) AS ?thisPositionOn102) . BIND(STRLEN(REPLACE(SUBSTR(?templateMotifCigarP37019MF_01128481, 1, (STRLEN(?templateMotifCigarP37019MF_01128481) - STRLEN(REPLACE(?templateMotifCigarP37019MF_01128481, CONCAT('^(?:-*[^-]){', STR(((176 - ?templateMotifSequenceMatchBeginPositionP37019482) + 1)), '}'), '')))), '[a-z]', '')) AS ?step1495) . BIND((STRLEN(SUBSTR(?targetMotifMatchCigarP37019MF_01128483, 1, (STRLEN(?targetMotifMatchCigarP37019MF_01128483) - STRLEN(REPLACE(?targetMotifMatchCigarP37019MF_01128483, CONCAT('^(?:[a-z]*(?:[A-Z]|-)){', STR(?step1495), '}'), ''))))) - STRLEN(REPLACE(SUBSTR(?targetMotifMatchCigarP37019MF_01128483, 1, (STRLEN(?targetMotifMatchCigarP37019MF_01128483) - STRLEN(REPLACE(?targetMotifMatchCigarP37019MF_01128483, CONCAT('^(?:[a-z]*(?:[A-Z]|-)){', STR(?step1495), '}'), '')))), '[^-]', ''))) AS ?step2496) . BIND(((?step2496 + ?targetMotifMatchRegionMatchBeginPositionMF_01128484) - 1) AS ?thisPositionOn103) . BIND(?this AS ?pfs2t497) . BIND(URI(CONCAT(STR(?thisSequence), '#position', STR(?thisPositionOn102))) AS ?pfsb100) . BIND(URI(CONCAT(STR(?thisSequence), '#position', STR(?thisPositionOn103))) AS ?pfse101) . FILTER ((BOUND(?thisPositionOn102) && BOUND(?thisPositionOn103))) . BIND(URI(CONCAT(STR(?this), '#MF_01128a99')) AS ?annotation99) . BIND(?this AS ?pfs98) . } OPTIONAL { ?this up:sequence ?thisSequence . ?thisSequence rdf:value ?thisSequenceValue . ?templateMotifMatch503 faldo:location ?templateMotifSequenceMatchRegionP37019504 ; edam:is_output_of ?templateMotifSequenceProfileAlignmentOperationP37019506 ; rdf:type edam:data_0869 ; rdf:value ?templateMotifCigarP37019MF_01128499 . ?templateMotifSequenceMatchRegionP37019504 faldo:begin ?templateMotifSequenceMatchBeginP37019505 . ?templateMotifSequenceMatchBeginP37019505 faldo:position ?templateMotifSequenceMatchBeginPositionP37019500 ; faldo:reference isoform:P37019-1 . ?templateMotifSequenceProfileAlignmentOperationP37019506 edam:has_input signature:MF_01128 ; rdf:type edam:operation_0300 . ?targetMotifMatch507 faldo:location ?targetMotifMatchRegionMatch508 ; edam:is_output_of ?targetMotifSequenceAlignmentOperationMF_01128510 ; rdf:type edam:data_0869 ; rdf:value ?targetMotifMatchCigarP37019MF_01128501 . ?targetMotifMatchRegionMatch508 faldo:begin ?targetMotifMatchRegionMatchBeginMF_01128509 . ?targetMotifMatchRegionMatchBeginMF_01128509 faldo:position ?targetMotifMatchRegionMatchBeginPositionMF_01128502 ; faldo:reference ?thisSequence . ?targetMotifSequenceAlignmentOperationMF_01128510 edam:has_input signature:MF_01128 ; rdf:type edam:operation_0300 . { ?this up:proteome <http://purl.uniprot.org/proteomes/Membrane#2>. } UNION { ?this up:proteome ?p498 . ?p498 skos:narrower <http://purl.uniprot.org/proteomes/Membrane#2>. } BIND(STRLEN(REPLACE(SUBSTR(?templateMotifCigarP37019MF_01128499, 1, (STRLEN(?templateMotifCigarP37019MF_01128499) - STRLEN(REPLACE(?templateMotifCigarP37019MF_01128499, CONCAT('^(?:-*[^-]){', STR(((177 - ?templateMotifSequenceMatchBeginPositionP37019500) + 1)), '}'), '')))), '[a-z]', '')) AS ?step1511) . BIND((STRLEN(SUBSTR(?targetMotifMatchCigarP37019MF_01128501, 1, (STRLEN(?targetMotifMatchCigarP37019MF_01128501) - STRLEN(REPLACE(?targetMotifMatchCigarP37019MF_01128501, CONCAT('^(?:[a-z]*(?:[A-Z]|-)){', STR(?step1511), '}'), ''))))) - STRLEN(REPLACE(SUBSTR(?targetMotifMatchCigarP37019MF_01128501, 1, (STRLEN(?targetMotifMatchCigarP37019MF_01128501) - STRLEN(REPLACE(?targetMotifMatchCigarP37019MF_01128501, CONCAT('^(?:[a-z]*(?:[A-Z]|-)){', STR(?step1511), '}'), '')))), '[^-]', ''))) AS ?step2512) . BIND(((?step2512 + ?targetMotifMatchRegionMatchBeginPositionMF_01128502) - 1) AS ?thisPositionOn108) . BIND(STRLEN(REPLACE(SUBSTR(?templateMotifCigarP37019MF_01128499, 1, (STRLEN(?templateMotifCigarP37019MF_01128499) - STRLEN(REPLACE(?templateMotifCigarP37019MF_01128499, CONCAT('^(?:-*[^-]){', STR(((189 - ?templateMotifSequenceMatchBeginPositionP37019500) + 1)), '}'), '')))), '[a-z]', '')) AS ?step1513) . BIND((STRLEN(SUBSTR(?targetMotifMatchCigarP37019MF_01128501, 1, (STRLEN(?targetMotifMatchCigarP37019MF_01128501) - STRLEN(REPLACE(?targetMotifMatchCigarP37019MF_01128501, CONCAT('^(?:[a-z]*(?:[A-Z]|-)){', STR(?step1513), '}'), ''))))) - STRLEN(REPLACE(SUBSTR(?targetMotifMatchCigarP37019MF_01128501, 1, (STRLEN(?targetMotifMatchCigarP37019MF_01128501) - STRLEN(REPLACE(?targetMotifMatchCigarP37019MF_01128501, CONCAT('^(?:[a-z]*(?:[A-Z]|-)){', STR(?step1513), '}'), '')))), '[^-]', ''))) AS ?step2514) . BIND(((?step2514 + ?targetMotifMatchRegionMatchBeginPositionMF_01128502) - 1) AS ?thisPositionOn109) . BIND(?this AS ?pfs2t515) . BIND(URI(CONCAT(STR(?thisSequence), '#position', STR(?thisPositionOn108))) AS ?pfsb106) . BIND(URI(CONCAT(STR(?thisSequence), '#position', STR(?thisPositionOn109))) AS ?pfse107) . FILTER ((BOUND(?thisPositionOn108) && BOUND(?thisPositionOn109))) . BIND(URI(CONCAT(STR(?this), '#MF_01128a105')) AS ?annotation105) . BIND(?this AS ?pfs104) . } OPTIONAL { ?this up:sequence ?thisSequence . ?thisSequence rdf:value ?thisSequenceValue . ?templateMotifMatch521 faldo:location ?templateMotifSequenceMatchRegionP37019522 ; edam:is_output_of ?templateMotifSequenceProfileAlignmentOperationP37019524 ; rdf:type edam:data_0869 ; rdf:value ?templateMotifCigarP37019MF_01128517 . ?templateMotifSequenceMatchRegionP37019522 faldo:begin ?templateMotifSequenceMatchBeginP37019523 . ?templateMotifSequenceMatchBeginP37019523 faldo:position ?templateMotifSequenceMatchBeginPositionP37019518 ; faldo:reference isoform:P37019-1 . ?templateMotifSequenceProfileAlignmentOperationP37019524 edam:has_input signature:MF_01128 ; rdf:type edam:operation_0300 . ?targetMotifMatch525 faldo:location ?targetMotifMatchRegionMatch526 ; edam:is_output_of ?targetMotifSequenceAlignmentOperationMF_01128528 ; rdf:type edam:data_0869 ; rdf:value ?targetMotifMatchCigarP37019MF_01128519 . ?targetMotifMatchRegionMatch526 faldo:begin ?targetMotifMatchRegionMatchBeginMF_01128527 . ?targetMotifMatchRegionMatchBeginMF_01128527 faldo:position ?targetMotifMatchRegionMatchBeginPositionMF_01128520 ; faldo:reference ?thisSequence . ?targetMotifSequenceAlignmentOperationMF_01128528 edam:has_input signature:MF_01128 ; rdf:type edam:operation_0300 . { ?this up:proteome <http://purl.uniprot.org/proteomes/Membrane#2>. } UNION { ?this up:proteome ?p516 . ?p516 skos:narrower <http://purl.uniprot.org/proteomes/Membrane#2>. } BIND(STRLEN(REPLACE(SUBSTR(?templateMotifCigarP37019MF_01128517, 1, (STRLEN(?templateMotifCigarP37019MF_01128517) - STRLEN(REPLACE(?templateMotifCigarP37019MF_01128517, CONCAT('^(?:-*[^-]){', STR(((193 - ?templateMotifSequenceMatchBeginPositionP37019518) + 1)), '}'), '')))), '[a-z]', '')) AS ?step1529) . BIND((STRLEN(SUBSTR(?targetMotifMatchCigarP37019MF_01128519, 1, (STRLEN(?targetMotifMatchCigarP37019MF_01128519) - STRLEN(REPLACE(?targetMotifMatchCigarP37019MF_01128519, CONCAT('^(?:[a-z]*(?:[A-Z]|-)){', STR(?step1529), '}'), ''))))) - STRLEN(REPLACE(SUBSTR(?targetMotifMatchCigarP37019MF_01128519, 1, (STRLEN(?targetMotifMatchCigarP37019MF_01128519) - STRLEN(REPLACE(?targetMotifMatchCigarP37019MF_01128519, CONCAT('^(?:[a-z]*(?:[A-Z]|-)){', STR(?step1529), '}'), '')))), '[^-]', ''))) AS ?step2530) . BIND(((?step2530 + ?targetMotifMatchRegionMatchBeginPositionMF_01128520) - 1) AS ?thisPositionOn114) . BIND(STRLEN(REPLACE(SUBSTR(?templateMotifCigarP37019MF_01128517, 1, (STRLEN(?templateMotifCigarP37019MF_01128517) - STRLEN(REPLACE(?templateMotifCigarP37019MF_01128517, CONCAT('^(?:-*[^-]){', STR(((201 - ?templateMotifSequenceMatchBeginPositionP37019518) + 1)), '}'), '')))), '[a-z]', '')) AS ?step1531) . BIND((STRLEN(SUBSTR(?targetMotifMatchCigarP37019MF_01128519, 1, (STRLEN(?targetMotifMatchCigarP37019MF_01128519) - STRLEN(REPLACE(?targetMotifMatchCigarP37019MF_01128519, CONCAT('^(?:[a-z]*(?:[A-Z]|-)){', STR(?step1531), '}'), ''))))) - STRLEN(REPLACE(SUBSTR(?targetMotifMatchCigarP37019MF_01128519, 1, (STRLEN(?targetMotifMatchCigarP37019MF_01128519) - STRLEN(REPLACE(?targetMotifMatchCigarP37019MF_01128519, CONCAT('^(?:[a-z]*(?:[A-Z]|-)){', STR(?step1531), '}'), '')))), '[^-]', ''))) AS ?step2532) . BIND(((?step2532 + ?targetMotifMatchRegionMatchBeginPositionMF_01128520) - 1) AS ?thisPositionOn115) . BIND(?this AS ?pfs2t533) . BIND(URI(CONCAT(STR(?thisSequence), '#position', STR(?thisPositionOn114))) AS ?pfsb112) . BIND(URI(CONCAT(STR(?thisSequence), '#position', STR(?thisPositionOn115))) AS ?pfse113) . FILTER ((BOUND(?thisPositionOn114) && BOUND(?thisPositionOn115))) . BIND(URI(CONCAT(STR(?this), '#MF_01128a111')) AS ?annotation111) . BIND(?this AS ?pfs110) . } OPTIONAL { ?this up:sequence ?thisSequence . ?thisSequence rdf:value ?thisSequenceValue . ?templateMotifMatch539 faldo:location ?templateMotifSequenceMatchRegionP37019540 ; edam:is_output_of ?templateMotifSequenceProfileAlignmentOperationP37019542 ; rdf:type edam:data_0869 ; rdf:value ?templateMotifCigarP37019MF_01128535 . ?templateMotifSequenceMatchRegionP37019540 faldo:begin ?templateMotifSequenceMatchBeginP37019541 . ?templateMotifSequenceMatchBeginP37019541 faldo:position ?templateMotifSequenceMatchBeginPositionP37019536 ; faldo:reference isoform:P37019-1 . ?templateMotifSequenceProfileAlignmentOperationP37019542 edam:has_input signature:MF_01128 ; rdf:type edam:operation_0300 . ?targetMotifMatch543 faldo:location ?targetMotifMatchRegionMatch544 ; edam:is_output_of ?targetMotifSequenceAlignmentOperationMF_01128546 ; rdf:type edam:data_0869 ; rdf:value ?targetMotifMatchCigarP37019MF_01128537 . ?targetMotifMatchRegionMatch544 faldo:begin ?targetMotifMatchRegionMatchBeginMF_01128545 . ?targetMotifMatchRegionMatchBeginMF_01128545 faldo:position ?targetMotifMatchRegionMatchBeginPositionMF_01128538 ; faldo:reference ?thisSequence . ?targetMotifSequenceAlignmentOperationMF_01128546 edam:has_input signature:MF_01128 ; rdf:type edam:operation_0300 . { ?this up:proteome <http://purl.uniprot.org/proteomes/Membrane#2>. } UNION { ?this up:proteome ?p534 . ?p534 skos:narrower <http://purl.uniprot.org/proteomes/Membrane#2>. } BIND(STRLEN(REPLACE(SUBSTR(?templateMotifCigarP37019MF_01128535, 1, (STRLEN(?templateMotifCigarP37019MF_01128535) - STRLEN(REPLACE(?templateMotifCigarP37019MF_01128535, CONCAT('^(?:-*[^-]){', STR(((202 - ?templateMotifSequenceMatchBeginPositionP37019536) + 1)), '}'), '')))), '[a-z]', '')) AS ?step1547) . BIND((STRLEN(SUBSTR(?targetMotifMatchCigarP37019MF_01128537, 1, (STRLEN(?targetMotifMatchCigarP37019MF_01128537) - STRLEN(REPLACE(?targetMotifMatchCigarP37019MF_01128537, CONCAT('^(?:[a-z]*(?:[A-Z]|-)){', STR(?step1547), '}'), ''))))) - STRLEN(REPLACE(SUBSTR(?targetMotifMatchCigarP37019MF_01128537, 1, (STRLEN(?targetMotifMatchCigarP37019MF_01128537) - STRLEN(REPLACE(?targetMotifMatchCigarP37019MF_01128537, CONCAT('^(?:[a-z]*(?:[A-Z]|-)){', STR(?step1547), '}'), '')))), '[^-]', ''))) AS ?step2548) . BIND(((?step2548 + ?targetMotifMatchRegionMatchBeginPositionMF_01128538) - 1) AS ?thisPositionOn120) . BIND(STRLEN(REPLACE(SUBSTR(?templateMotifCigarP37019MF_01128535, 1, (STRLEN(?templateMotifCigarP37019MF_01128535) - STRLEN(REPLACE(?templateMotifCigarP37019MF_01128535, CONCAT('^(?:-*[^-]){', STR(((214 - ?templateMotifSequenceMatchBeginPositionP37019536) + 1)), '}'), '')))), '[a-z]', '')) AS ?step1549) . BIND((STRLEN(SUBSTR(?targetMotifMatchCigarP37019MF_01128537, 1, (STRLEN(?targetMotifMatchCigarP37019MF_01128537) - STRLEN(REPLACE(?targetMotifMatchCigarP37019MF_01128537, CONCAT('^(?:[a-z]*(?:[A-Z]|-)){', STR(?step1549), '}'), ''))))) - STRLEN(REPLACE(SUBSTR(?targetMotifMatchCigarP37019MF_01128537, 1, (STRLEN(?targetMotifMatchCigarP37019MF_01128537) - STRLEN(REPLACE(?targetMotifMatchCigarP37019MF_01128537, CONCAT('^(?:[a-z]*(?:[A-Z]|-)){', STR(?step1549), '}'), '')))), '[^-]', ''))) AS ?step2550) . BIND(((?step2550 + ?targetMotifMatchRegionMatchBeginPositionMF_01128538) - 1) AS ?thisPositionOn121) . BIND(?this AS ?pfs2t551) . BIND(URI(CONCAT(STR(?thisSequence), '#position', STR(?thisPositionOn120))) AS ?pfsb118) . BIND(URI(CONCAT(STR(?thisSequence), '#position', STR(?thisPositionOn121))) AS ?pfse119) . FILTER ((BOUND(?thisPositionOn120) && BOUND(?thisPositionOn121))) . BIND(URI(CONCAT(STR(?this), '#MF_01128a117')) AS ?annotation117) . BIND(?this AS ?pfs116) . } OPTIONAL { ?this up:sequence ?thisSequence . ?thisSequence rdf:value ?thisSequenceValue . ?templateMotifMatch557 faldo:location ?templateMotifSequenceMatchRegionP37019558 ; edam:is_output_of ?templateMotifSequenceProfileAlignmentOperationP37019560 ; rdf:type edam:data_0869 ; rdf:value ?templateMotifCigarP37019MF_01128553 . ?templateMotifSequenceMatchRegionP37019558 faldo:begin ?templateMotifSequenceMatchBeginP37019559 . ?templateMotifSequenceMatchBeginP37019559 faldo:position ?templateMotifSequenceMatchBeginPositionP37019554 ; faldo:reference isoform:P37019-1 . ?templateMotifSequenceProfileAlignmentOperationP37019560 edam:has_input signature:MF_01128 ; rdf:type edam:operation_0300 . ?targetMotifMatch561 faldo:location ?targetMotifMatchRegionMatch562 ; edam:is_output_of ?targetMotifSequenceAlignmentOperationMF_01128564 ; rdf:type edam:data_0869 ; rdf:value ?targetMotifMatchCigarP37019MF_01128555 . ?targetMotifMatchRegionMatch562 faldo:begin ?targetMotifMatchRegionMatchBeginMF_01128563 . ?targetMotifMatchRegionMatchBeginMF_01128563 faldo:position ?targetMotifMatchRegionMatchBeginPositionMF_01128556 ; faldo:reference ?thisSequence . ?targetMotifSequenceAlignmentOperationMF_01128564 edam:has_input signature:MF_01128 ; rdf:type edam:operation_0300 . { ?this up:proteome <http://purl.uniprot.org/proteomes/Membrane#2>. } UNION { ?this up:proteome ?p552 . ?p552 skos:narrower <http://purl.uniprot.org/proteomes/Membrane#2>. } BIND(STRLEN(REPLACE(SUBSTR(?templateMotifCigarP37019MF_01128553, 1, (STRLEN(?templateMotifCigarP37019MF_01128553) - STRLEN(REPLACE(?templateMotifCigarP37019MF_01128553, CONCAT('^(?:-*[^-]){', STR(((215 - ?templateMotifSequenceMatchBeginPositionP37019554) + 1)), '}'), '')))), '[a-z]', '')) AS ?step1565) . BIND((STRLEN(SUBSTR(?targetMotifMatchCigarP37019MF_01128555, 1, (STRLEN(?targetMotifMatchCigarP37019MF_01128555) - STRLEN(REPLACE(?targetMotifMatchCigarP37019MF_01128555, CONCAT('^(?:[a-z]*(?:[A-Z]|-)){', STR(?step1565), '}'), ''))))) - STRLEN(REPLACE(SUBSTR(?targetMotifMatchCigarP37019MF_01128555, 1, (STRLEN(?targetMotifMatchCigarP37019MF_01128555) - STRLEN(REPLACE(?targetMotifMatchCigarP37019MF_01128555, CONCAT('^(?:[a-z]*(?:[A-Z]|-)){', STR(?step1565), '}'), '')))), '[^-]', ''))) AS ?step2566) . BIND(((?step2566 + ?targetMotifMatchRegionMatchBeginPositionMF_01128556) - 1) AS ?thisPositionOn126) . BIND(STRLEN(REPLACE(SUBSTR(?templateMotifCigarP37019MF_01128553, 1, (STRLEN(?templateMotifCigarP37019MF_01128553) - STRLEN(REPLACE(?templateMotifCigarP37019MF_01128553, CONCAT('^(?:-*[^-]){', STR(((232 - ?templateMotifSequenceMatchBeginPositionP37019554) + 1)), '}'), '')))), '[a-z]', '')) AS ?step1567) . BIND((STRLEN(SUBSTR(?targetMotifMatchCigarP37019MF_01128555, 1, (STRLEN(?targetMotifMatchCigarP37019MF_01128555) - STRLEN(REPLACE(?targetMotifMatchCigarP37019MF_01128555, CONCAT('^(?:[a-z]*(?:[A-Z]|-)){', STR(?step1567), '}'), ''))))) - STRLEN(REPLACE(SUBSTR(?targetMotifMatchCigarP37019MF_01128555, 1, (STRLEN(?targetMotifMatchCigarP37019MF_01128555) - STRLEN(REPLACE(?targetMotifMatchCigarP37019MF_01128555, CONCAT('^(?:[a-z]*(?:[A-Z]|-)){', STR(?step1567), '}'), '')))), '[^-]', ''))) AS ?step2568) . BIND(((?step2568 + ?targetMotifMatchRegionMatchBeginPositionMF_01128556) - 1) AS ?thisPositionOn127) . BIND(?this AS ?pfs2t569) . BIND(URI(CONCAT(STR(?thisSequence), '#position', STR(?thisPositionOn126))) AS ?pfsb124) . BIND(URI(CONCAT(STR(?thisSequence), '#position', STR(?thisPositionOn127))) AS ?pfse125) . FILTER ((BOUND(?thisPositionOn126) && BOUND(?thisPositionOn127))) . BIND(URI(CONCAT(STR(?this), '#MF_01128a123')) AS ?annotation123) . BIND(?this AS ?pfs122) . } OPTIONAL { ?this up:sequence ?thisSequence . ?thisSequence rdf:value ?thisSequenceValue . ?templateMotifMatch575 faldo:location ?templateMotifSequenceMatchRegionP37019576 ; edam:is_output_of ?templateMotifSequenceProfileAlignmentOperationP37019578 ; rdf:type edam:data_0869 ; rdf:value ?templateMotifCigarP37019MF_01128571 . ?templateMotifSequenceMatchRegionP37019576 faldo:begin ?templateMotifSequenceMatchBeginP37019577 . ?templateMotifSequenceMatchBeginP37019577 faldo:position ?templateMotifSequenceMatchBeginPositionP37019572 ; faldo:reference isoform:P37019-1 . ?templateMotifSequenceProfileAlignmentOperationP37019578 edam:has_input signature:MF_01128 ; rdf:type edam:operation_0300 . ?targetMotifMatch579 faldo:location ?targetMotifMatchRegionMatch580 ; edam:is_output_of ?targetMotifSequenceAlignmentOperationMF_01128582 ; rdf:type edam:data_0869 ; rdf:value ?targetMotifMatchCigarP37019MF_01128573 . ?targetMotifMatchRegionMatch580 faldo:begin ?targetMotifMatchRegionMatchBeginMF_01128581 . ?targetMotifMatchRegionMatchBeginMF_01128581 faldo:position ?targetMotifMatchRegionMatchBeginPositionMF_01128574 ; faldo:reference ?thisSequence . ?targetMotifSequenceAlignmentOperationMF_01128582 edam:has_input signature:MF_01128 ; rdf:type edam:operation_0300 . { ?this up:proteome <http://purl.uniprot.org/proteomes/Membrane#2>. } UNION { ?this up:proteome ?p570 . ?p570 skos:narrower <http://purl.uniprot.org/proteomes/Membrane#2>. } BIND(STRLEN(REPLACE(SUBSTR(?templateMotifCigarP37019MF_01128571, 1, (STRLEN(?templateMotifCigarP37019MF_01128571) - STRLEN(REPLACE(?templateMotifCigarP37019MF_01128571, CONCAT('^(?:-*[^-]){', STR(((233 - ?templateMotifSequenceMatchBeginPositionP37019572) + 1)), '}'), '')))), '[a-z]', '')) AS ?step1583) . BIND((STRLEN(SUBSTR(?targetMotifMatchCigarP37019MF_01128573, 1, (STRLEN(?targetMotifMatchCigarP37019MF_01128573) - STRLEN(REPLACE(?targetMotifMatchCigarP37019MF_01128573, CONCAT('^(?:[a-z]*(?:[A-Z]|-)){', STR(?step1583), '}'), ''))))) - STRLEN(REPLACE(SUBSTR(?targetMotifMatchCigarP37019MF_01128573, 1, (STRLEN(?targetMotifMatchCigarP37019MF_01128573) - STRLEN(REPLACE(?targetMotifMatchCigarP37019MF_01128573, CONCAT('^(?:[a-z]*(?:[A-Z]|-)){', STR(?step1583), '}'), '')))), '[^-]', ''))) AS ?step2584) . BIND(((?step2584 + ?targetMotifMatchRegionMatchBeginPositionMF_01128574) - 1) AS ?thisPositionOn132) . BIND(STRLEN(REPLACE(SUBSTR(?templateMotifCigarP37019MF_01128571, 1, (STRLEN(?templateMotifCigarP37019MF_01128571) - STRLEN(REPLACE(?templateMotifCigarP37019MF_01128571, CONCAT('^(?:-*[^-]){', STR(((252 - ?templateMotifSequenceMatchBeginPositionP37019572) + 1)), '}'), '')))), '[a-z]', '')) AS ?step1585) . BIND((STRLEN(SUBSTR(?targetMotifMatchCigarP37019MF_01128573, 1, (STRLEN(?targetMotifMatchCigarP37019MF_01128573) - STRLEN(REPLACE(?targetMotifMatchCigarP37019MF_01128573, CONCAT('^(?:[a-z]*(?:[A-Z]|-)){', STR(?step1585), '}'), ''))))) - STRLEN(REPLACE(SUBSTR(?targetMotifMatchCigarP37019MF_01128573, 1, (STRLEN(?targetMotifMatchCigarP37019MF_01128573) - STRLEN(REPLACE(?targetMotifMatchCigarP37019MF_01128573, CONCAT('^(?:[a-z]*(?:[A-Z]|-)){', STR(?step1585), '}'), '')))), '[^-]', ''))) AS ?step2586) . BIND(((?step2586 + ?targetMotifMatchRegionMatchBeginPositionMF_01128574) - 1) AS ?thisPositionOn133) . BIND(?this AS ?pfs2t587) . BIND(URI(CONCAT(STR(?thisSequence), '#position', STR(?thisPositionOn132))) AS ?pfsb130) . BIND(URI(CONCAT(STR(?thisSequence), '#position', STR(?thisPositionOn133))) AS ?pfse131) . FILTER ((BOUND(?thisPositionOn132) && BOUND(?thisPositionOn133))) . BIND(URI(CONCAT(STR(?this), '#MF_01128a129')) AS ?annotation129) . BIND(?this AS ?pfs128) . } OPTIONAL { ?this up:sequence ?thisSequence . ?thisSequence rdf:value ?thisSequenceValue . ?templateMotifMatch593 faldo:location ?templateMotifSequenceMatchRegionP37019594 ; edam:is_output_of ?templateMotifSequenceProfileAlignmentOperationP37019596 ; rdf:type edam:data_0869 ; rdf:value ?templateMotifCigarP37019MF_01128589 . ?templateMotifSequenceMatchRegionP37019594 faldo:begin ?templateMotifSequenceMatchBeginP37019595 . ?templateMotifSequenceMatchBeginP37019595 faldo:position ?templateMotifSequenceMatchBeginPositionP37019590 ; faldo:reference isoform:P37019-1 . ?templateMotifSequenceProfileAlignmentOperationP37019596 edam:has_input signature:MF_01128 ; rdf:type edam:operation_0300 . ?targetMotifMatch597 faldo:location ?targetMotifMatchRegionMatch598 ; edam:is_output_of ?targetMotifSequenceAlignmentOperationMF_01128600 ; rdf:type edam:data_0869 ; rdf:value ?targetMotifMatchCigarP37019MF_01128591 . ?targetMotifMatchRegionMatch598 faldo:begin ?targetMotifMatchRegionMatchBeginMF_01128599 . ?targetMotifMatchRegionMatchBeginMF_01128599 faldo:position ?targetMotifMatchRegionMatchBeginPositionMF_01128592 ; faldo:reference ?thisSequence . ?targetMotifSequenceAlignmentOperationMF_01128600 edam:has_input signature:MF_01128 ; rdf:type edam:operation_0300 . { ?this up:proteome <http://purl.uniprot.org/proteomes/Membrane#2>. } UNION { ?this up:proteome ?p588 . ?p588 skos:narrower <http://purl.uniprot.org/proteomes/Membrane#2>. } BIND(STRLEN(REPLACE(SUBSTR(?templateMotifCigarP37019MF_01128589, 1, (STRLEN(?templateMotifCigarP37019MF_01128589) - STRLEN(REPLACE(?templateMotifCigarP37019MF_01128589, CONCAT('^(?:-*[^-]){', STR(((253 - ?templateMotifSequenceMatchBeginPositionP37019590) + 1)), '}'), '')))), '[a-z]', '')) AS ?step1601) . BIND((STRLEN(SUBSTR(?targetMotifMatchCigarP37019MF_01128591, 1, (STRLEN(?targetMotifMatchCigarP37019MF_01128591) - STRLEN(REPLACE(?targetMotifMatchCigarP37019MF_01128591, CONCAT('^(?:[a-z]*(?:[A-Z]|-)){', STR(?step1601), '}'), ''))))) - STRLEN(REPLACE(SUBSTR(?targetMotifMatchCigarP37019MF_01128591, 1, (STRLEN(?targetMotifMatchCigarP37019MF_01128591) - STRLEN(REPLACE(?targetMotifMatchCigarP37019MF_01128591, CONCAT('^(?:[a-z]*(?:[A-Z]|-)){', STR(?step1601), '}'), '')))), '[^-]', ''))) AS ?step2602) . BIND(((?step2602 + ?targetMotifMatchRegionMatchBeginPositionMF_01128592) - 1) AS ?thisPositionOn138) . BIND(STRLEN(REPLACE(SUBSTR(?templateMotifCigarP37019MF_01128589, 1, (STRLEN(?templateMotifCigarP37019MF_01128589) - STRLEN(REPLACE(?templateMotifCigarP37019MF_01128589, CONCAT('^(?:-*[^-]){', STR(((281 - ?templateMotifSequenceMatchBeginPositionP37019590) + 1)), '}'), '')))), '[a-z]', '')) AS ?step1603) . BIND((STRLEN(SUBSTR(?targetMotifMatchCigarP37019MF_01128591, 1, (STRLEN(?targetMotifMatchCigarP37019MF_01128591) - STRLEN(REPLACE(?targetMotifMatchCigarP37019MF_01128591, CONCAT('^(?:[a-z]*(?:[A-Z]|-)){', STR(?step1603), '}'), ''))))) - STRLEN(REPLACE(SUBSTR(?targetMotifMatchCigarP37019MF_01128591, 1, (STRLEN(?targetMotifMatchCigarP37019MF_01128591) - STRLEN(REPLACE(?targetMotifMatchCigarP37019MF_01128591, CONCAT('^(?:[a-z]*(?:[A-Z]|-)){', STR(?step1603), '}'), '')))), '[^-]', ''))) AS ?step2604) . BIND(((?step2604 + ?targetMotifMatchRegionMatchBeginPositionMF_01128592) - 1) AS ?thisPositionOn139) . BIND(?this AS ?pfs2t605) . BIND(URI(CONCAT(STR(?thisSequence), '#position', STR(?thisPositionOn138))) AS ?pfsb136) . BIND(URI(CONCAT(STR(?thisSequence), '#position', STR(?thisPositionOn139))) AS ?pfse137) . FILTER ((BOUND(?thisPositionOn138) && BOUND(?thisPositionOn139))) . BIND(URI(CONCAT(STR(?this), '#MF_01128a135')) AS ?annotation135) . BIND(?this AS ?pfs134) . } OPTIONAL { ?this up:sequence ?thisSequence . ?thisSequence rdf:value ?thisSequenceValue . ?templateMotifMatch611 faldo:location ?templateMotifSequenceMatchRegionP37019612 ; edam:is_output_of ?templateMotifSequenceProfileAlignmentOperationP37019614 ; rdf:type edam:data_0869 ; rdf:value ?templateMotifCigarP37019MF_01128607 . ?templateMotifSequenceMatchRegionP37019612 faldo:begin ?templateMotifSequenceMatchBeginP37019613 . ?templateMotifSequenceMatchBeginP37019613 faldo:position ?templateMotifSequenceMatchBeginPositionP37019608 ; faldo:reference isoform:P37019-1 . ?templateMotifSequenceProfileAlignmentOperationP37019614 edam:has_input signature:MF_01128 ; rdf:type edam:operation_0300 . ?targetMotifMatch615 faldo:location ?targetMotifMatchRegionMatch616 ; edam:is_output_of ?targetMotifSequenceAlignmentOperationMF_01128618 ; rdf:type edam:data_0869 ; rdf:value ?targetMotifMatchCigarP37019MF_01128609 . ?targetMotifMatchRegionMatch616 faldo:begin ?targetMotifMatchRegionMatchBeginMF_01128617 . ?targetMotifMatchRegionMatchBeginMF_01128617 faldo:position ?targetMotifMatchRegionMatchBeginPositionMF_01128610 ; faldo:reference ?thisSequence . ?targetMotifSequenceAlignmentOperationMF_01128618 edam:has_input signature:MF_01128 ; rdf:type edam:operation_0300 . { ?this up:proteome <http://purl.uniprot.org/proteomes/Membrane#2>. } UNION { ?this up:proteome ?p606 . ?p606 skos:narrower <http://purl.uniprot.org/proteomes/Membrane#2>. } BIND(STRLEN(REPLACE(SUBSTR(?templateMotifCigarP37019MF_01128607, 1, (STRLEN(?templateMotifCigarP37019MF_01128607) - STRLEN(REPLACE(?templateMotifCigarP37019MF_01128607, CONCAT('^(?:-*[^-]){', STR(((282 - ?templateMotifSequenceMatchBeginPositionP37019608) + 1)), '}'), '')))), '[a-z]', '')) AS ?step1619) . BIND((STRLEN(SUBSTR(?targetMotifMatchCigarP37019MF_01128609, 1, (STRLEN(?targetMotifMatchCigarP37019MF_01128609) - STRLEN(REPLACE(?targetMotifMatchCigarP37019MF_01128609, CONCAT('^(?:[a-z]*(?:[A-Z]|-)){', STR(?step1619), '}'), ''))))) - STRLEN(REPLACE(SUBSTR(?targetMotifMatchCigarP37019MF_01128609, 1, (STRLEN(?targetMotifMatchCigarP37019MF_01128609) - STRLEN(REPLACE(?targetMotifMatchCigarP37019MF_01128609, CONCAT('^(?:[a-z]*(?:[A-Z]|-)){', STR(?step1619), '}'), '')))), '[^-]', ''))) AS ?step2620) . BIND(((?step2620 + ?targetMotifMatchRegionMatchBeginPositionMF_01128610) - 1) AS ?thisPositionOn144) . BIND(STRLEN(REPLACE(SUBSTR(?templateMotifCigarP37019MF_01128607, 1, (STRLEN(?templateMotifCigarP37019MF_01128607) - STRLEN(REPLACE(?templateMotifCigarP37019MF_01128607, CONCAT('^(?:-*[^-]){', STR(((287 - ?templateMotifSequenceMatchBeginPositionP37019608) + 1)), '}'), '')))), '[a-z]', '')) AS ?step1621) . BIND((STRLEN(SUBSTR(?targetMotifMatchCigarP37019MF_01128609, 1, (STRLEN(?targetMotifMatchCigarP37019MF_01128609) - STRLEN(REPLACE(?targetMotifMatchCigarP37019MF_01128609, CONCAT('^(?:[a-z]*(?:[A-Z]|-)){', STR(?step1621), '}'), ''))))) - STRLEN(REPLACE(SUBSTR(?targetMotifMatchCigarP37019MF_01128609, 1, (STRLEN(?targetMotifMatchCigarP37019MF_01128609) - STRLEN(REPLACE(?targetMotifMatchCigarP37019MF_01128609, CONCAT('^(?:[a-z]*(?:[A-Z]|-)){', STR(?step1621), '}'), '')))), '[^-]', ''))) AS ?step2622) . BIND(((?step2622 + ?targetMotifMatchRegionMatchBeginPositionMF_01128610) - 1) AS ?thisPositionOn145) . BIND(?this AS ?pfs2t623) . BIND(URI(CONCAT(STR(?thisSequence), '#position', STR(?thisPositionOn144))) AS ?pfsb142) . BIND(URI(CONCAT(STR(?thisSequence), '#position', STR(?thisPositionOn145))) AS ?pfse143) . FILTER ((BOUND(?thisPositionOn144) && BOUND(?thisPositionOn145))) . BIND(URI(CONCAT(STR(?this), '#MF_01128a141')) AS ?annotation141) . BIND(?this AS ?pfs140) . } OPTIONAL { ?this up:sequence ?thisSequence . ?thisSequence rdf:value ?thisSequenceValue . ?templateMotifMatch629 faldo:location ?templateMotifSequenceMatchRegionP37019630 ; edam:is_output_of ?templateMotifSequenceProfileAlignmentOperationP37019632 ; rdf:type edam:data_0869 ; rdf:value ?templateMotifCigarP37019MF_01128625 . ?templateMotifSequenceMatchRegionP37019630 faldo:begin ?templateMotifSequenceMatchBeginP37019631 . ?templateMotifSequenceMatchBeginP37019631 faldo:position ?templateMotifSequenceMatchBeginPositionP37019626 ; faldo:reference isoform:P37019-1 . ?templateMotifSequenceProfileAlignmentOperationP37019632 edam:has_input signature:MF_01128 ; rdf:type edam:operation_0300 . ?targetMotifMatch633 faldo:location ?targetMotifMatchRegionMatch634 ; edam:is_output_of ?targetMotifSequenceAlignmentOperationMF_01128636 ; rdf:type edam:data_0869 ; rdf:value ?targetMotifMatchCigarP37019MF_01128627 . ?targetMotifMatchRegionMatch634 faldo:begin ?targetMotifMatchRegionMatchBeginMF_01128635 . ?targetMotifMatchRegionMatchBeginMF_01128635 faldo:position ?targetMotifMatchRegionMatchBeginPositionMF_01128628 ; faldo:reference ?thisSequence . ?targetMotifSequenceAlignmentOperationMF_01128636 edam:has_input signature:MF_01128 ; rdf:type edam:operation_0300 . { ?this up:proteome <http://purl.uniprot.org/proteomes/Membrane#2>. } UNION { ?this up:proteome ?p624 . ?p624 skos:narrower <http://purl.uniprot.org/proteomes/Membrane#2>. } BIND(STRLEN(REPLACE(SUBSTR(?templateMotifCigarP37019MF_01128625, 1, (STRLEN(?templateMotifCigarP37019MF_01128625) - STRLEN(REPLACE(?templateMotifCigarP37019MF_01128625, CONCAT('^(?:-*[^-]){', STR(((288 - ?templateMotifSequenceMatchBeginPositionP37019626) + 1)), '}'), '')))), '[a-z]', '')) AS ?step1637) . BIND((STRLEN(SUBSTR(?targetMotifMatchCigarP37019MF_01128627, 1, (STRLEN(?targetMotifMatchCigarP37019MF_01128627) - STRLEN(REPLACE(?targetMotifMatchCigarP37019MF_01128627, CONCAT('^(?:[a-z]*(?:[A-Z]|-)){', STR(?step1637), '}'), ''))))) - STRLEN(REPLACE(SUBSTR(?targetMotifMatchCigarP37019MF_01128627, 1, (STRLEN(?targetMotifMatchCigarP37019MF_01128627) - STRLEN(REPLACE(?targetMotifMatchCigarP37019MF_01128627, CONCAT('^(?:[a-z]*(?:[A-Z]|-)){', STR(?step1637), '}'), '')))), '[^-]', ''))) AS ?step2638) . BIND(((?step2638 + ?targetMotifMatchRegionMatchBeginPositionMF_01128628) - 1) AS ?thisPositionOn150) . BIND(STRLEN(REPLACE(SUBSTR(?templateMotifCigarP37019MF_01128625, 1, (STRLEN(?templateMotifCigarP37019MF_01128625) - STRLEN(REPLACE(?templateMotifCigarP37019MF_01128625, CONCAT('^(?:-*[^-]){', STR(((309 - ?templateMotifSequenceMatchBeginPositionP37019626) + 1)), '}'), '')))), '[a-z]', '')) AS ?step1639) . BIND((STRLEN(SUBSTR(?targetMotifMatchCigarP37019MF_01128627, 1, (STRLEN(?targetMotifMatchCigarP37019MF_01128627) - STRLEN(REPLACE(?targetMotifMatchCigarP37019MF_01128627, CONCAT('^(?:[a-z]*(?:[A-Z]|-)){', STR(?step1639), '}'), ''))))) - STRLEN(REPLACE(SUBSTR(?targetMotifMatchCigarP37019MF_01128627, 1, (STRLEN(?targetMotifMatchCigarP37019MF_01128627) - STRLEN(REPLACE(?targetMotifMatchCigarP37019MF_01128627, CONCAT('^(?:[a-z]*(?:[A-Z]|-)){', STR(?step1639), '}'), '')))), '[^-]', ''))) AS ?step2640) . BIND(((?step2640 + ?targetMotifMatchRegionMatchBeginPositionMF_01128628) - 1) AS ?thisPositionOn151) . BIND(?this AS ?pfs2t641) . BIND(URI(CONCAT(STR(?thisSequence), '#position', STR(?thisPositionOn150))) AS ?pfsb148) . BIND(URI(CONCAT(STR(?thisSequence), '#position', STR(?thisPositionOn151))) AS ?pfse149) . FILTER ((BOUND(?thisPositionOn150) && BOUND(?thisPositionOn151))) . BIND(URI(CONCAT(STR(?this), '#MF_01128a147')) AS ?annotation147) . BIND(?this AS ?pfs146) . } OPTIONAL { ?this up:sequence ?thisSequence . ?thisSequence rdf:value ?thisSequenceValue . ?templateMotifMatch647 faldo:location ?templateMotifSequenceMatchRegionP37019648 ; edam:is_output_of ?templateMotifSequenceProfileAlignmentOperationP37019650 ; rdf:type edam:data_0869 ; rdf:value ?templateMotifCigarP37019MF_01128643 . ?templateMotifSequenceMatchRegionP37019648 faldo:begin ?templateMotifSequenceMatchBeginP37019649 . ?templateMotifSequenceMatchBeginP37019649 faldo:position ?templateMotifSequenceMatchBeginPositionP37019644 ; faldo:reference isoform:P37019-1 . ?templateMotifSequenceProfileAlignmentOperationP37019650 edam:has_input signature:MF_01128 ; rdf:type edam:operation_0300 . ?targetMotifMatch651 faldo:location ?targetMotifMatchRegionMatch652 ; edam:is_output_of ?targetMotifSequenceAlignmentOperationMF_01128654 ; rdf:type edam:data_0869 ; rdf:value ?targetMotifMatchCigarP37019MF_01128645 . ?targetMotifMatchRegionMatch652 faldo:begin ?targetMotifMatchRegionMatchBeginMF_01128653 . ?targetMotifMatchRegionMatchBeginMF_01128653 faldo:position ?targetMotifMatchRegionMatchBeginPositionMF_01128646 ; faldo:reference ?thisSequence . ?targetMotifSequenceAlignmentOperationMF_01128654 edam:has_input signature:MF_01128 ; rdf:type edam:operation_0300 . { ?this up:proteome <http://purl.uniprot.org/proteomes/Membrane#2>. } UNION { ?this up:proteome ?p642 . ?p642 skos:narrower <http://purl.uniprot.org/proteomes/Membrane#2>. } BIND(STRLEN(REPLACE(SUBSTR(?templateMotifCigarP37019MF_01128643, 1, (STRLEN(?templateMotifCigarP37019MF_01128643) - STRLEN(REPLACE(?templateMotifCigarP37019MF_01128643, CONCAT('^(?:-*[^-]){', STR(((310 - ?templateMotifSequenceMatchBeginPositionP37019644) + 1)), '}'), '')))), '[a-z]', '')) AS ?step1655) . BIND((STRLEN(SUBSTR(?targetMotifMatchCigarP37019MF_01128645, 1, (STRLEN(?targetMotifMatchCigarP37019MF_01128645) - STRLEN(REPLACE(?targetMotifMatchCigarP37019MF_01128645, CONCAT('^(?:[a-z]*(?:[A-Z]|-)){', STR(?step1655), '}'), ''))))) - STRLEN(REPLACE(SUBSTR(?targetMotifMatchCigarP37019MF_01128645, 1, (STRLEN(?targetMotifMatchCigarP37019MF_01128645) - STRLEN(REPLACE(?targetMotifMatchCigarP37019MF_01128645, CONCAT('^(?:[a-z]*(?:[A-Z]|-)){', STR(?step1655), '}'), '')))), '[^-]', ''))) AS ?step2656) . BIND(((?step2656 + ?targetMotifMatchRegionMatchBeginPositionMF_01128646) - 1) AS ?thisPositionOn156) . BIND(STRLEN(REPLACE(SUBSTR(?templateMotifCigarP37019MF_01128643, 1, (STRLEN(?templateMotifCigarP37019MF_01128643) - STRLEN(REPLACE(?templateMotifCigarP37019MF_01128643, CONCAT('^(?:-*[^-]){', STR(((329 - ?templateMotifSequenceMatchBeginPositionP37019644) + 1)), '}'), '')))), '[a-z]', '')) AS ?step1657) . BIND((STRLEN(SUBSTR(?targetMotifMatchCigarP37019MF_01128645, 1, (STRLEN(?targetMotifMatchCigarP37019MF_01128645) - STRLEN(REPLACE(?targetMotifMatchCigarP37019MF_01128645, CONCAT('^(?:[a-z]*(?:[A-Z]|-)){', STR(?step1657), '}'), ''))))) - STRLEN(REPLACE(SUBSTR(?targetMotifMatchCigarP37019MF_01128645, 1, (STRLEN(?targetMotifMatchCigarP37019MF_01128645) - STRLEN(REPLACE(?targetMotifMatchCigarP37019MF_01128645, CONCAT('^(?:[a-z]*(?:[A-Z]|-)){', STR(?step1657), '}'), '')))), '[^-]', ''))) AS ?step2658) . BIND(((?step2658 + ?targetMotifMatchRegionMatchBeginPositionMF_01128646) - 1) AS ?thisPositionOn157) . BIND(?this AS ?pfs2t659) . BIND(URI(CONCAT(STR(?thisSequence), '#position', STR(?thisPositionOn156))) AS ?pfsb154) . BIND(URI(CONCAT(STR(?thisSequence), '#position', STR(?thisPositionOn157))) AS ?pfse155) . FILTER ((BOUND(?thisPositionOn156) && BOUND(?thisPositionOn157))) . BIND(URI(CONCAT(STR(?this), '#MF_01128a153')) AS ?annotation153) . BIND(?this AS ?pfs152) . } OPTIONAL { ?this up:sequence ?thisSequence . ?thisSequence rdf:value ?thisSequenceValue . ?templateMotifMatch665 faldo:location ?templateMotifSequenceMatchRegionP37019666 ; edam:is_output_of ?templateMotifSequenceProfileAlignmentOperationP37019668 ; rdf:type edam:data_0869 ; rdf:value ?templateMotifCigarP37019MF_01128661 . ?templateMotifSequenceMatchRegionP37019666 faldo:begin ?templateMotifSequenceMatchBeginP37019667 . ?templateMotifSequenceMatchBeginP37019667 faldo:position ?templateMotifSequenceMatchBeginPositionP37019662 ; faldo:reference isoform:P37019-1 . ?templateMotifSequenceProfileAlignmentOperationP37019668 edam:has_input signature:MF_01128 ; rdf:type edam:operation_0300 . ?targetMotifMatch669 faldo:location ?targetMotifMatchRegionMatch670 ; edam:is_output_of ?targetMotifSequenceAlignmentOperationMF_01128672 ; rdf:type edam:data_0869 ; rdf:value ?targetMotifMatchCigarP37019MF_01128663 . ?targetMotifMatchRegionMatch670 faldo:begin ?targetMotifMatchRegionMatchBeginMF_01128671 . ?targetMotifMatchRegionMatchBeginMF_01128671 faldo:position ?targetMotifMatchRegionMatchBeginPositionMF_01128664 ; faldo:reference ?thisSequence . ?targetMotifSequenceAlignmentOperationMF_01128672 edam:has_input signature:MF_01128 ; rdf:type edam:operation_0300 . { ?this up:proteome <http://purl.uniprot.org/proteomes/Membrane#2>. } UNION { ?this up:proteome ?p660 . ?p660 skos:narrower <http://purl.uniprot.org/proteomes/Membrane#2>. } BIND(STRLEN(REPLACE(SUBSTR(?templateMotifCigarP37019MF_01128661, 1, (STRLEN(?templateMotifCigarP37019MF_01128661) - STRLEN(REPLACE(?templateMotifCigarP37019MF_01128661, CONCAT('^(?:-*[^-]){', STR(((330 - ?templateMotifSequenceMatchBeginPositionP37019662) + 1)), '}'), '')))), '[a-z]', '')) AS ?step1673) . BIND((STRLEN(SUBSTR(?targetMotifMatchCigarP37019MF_01128663, 1, (STRLEN(?targetMotifMatchCigarP37019MF_01128663) - STRLEN(REPLACE(?targetMotifMatchCigarP37019MF_01128663, CONCAT('^(?:[a-z]*(?:[A-Z]|-)){', STR(?step1673), '}'), ''))))) - STRLEN(REPLACE(SUBSTR(?targetMotifMatchCigarP37019MF_01128663, 1, (STRLEN(?targetMotifMatchCigarP37019MF_01128663) - STRLEN(REPLACE(?targetMotifMatchCigarP37019MF_01128663, CONCAT('^(?:[a-z]*(?:[A-Z]|-)){', STR(?step1673), '}'), '')))), '[^-]', ''))) AS ?step2674) . BIND(((?step2674 + ?targetMotifMatchRegionMatchBeginPositionMF_01128664) - 1) AS ?thisPositionOn162) . BIND(STRLEN(REPLACE(SUBSTR(?templateMotifCigarP37019MF_01128661, 1, (STRLEN(?templateMotifCigarP37019MF_01128661) - STRLEN(REPLACE(?templateMotifCigarP37019MF_01128661, CONCAT('^(?:-*[^-]){', STR(((349 - ?templateMotifSequenceMatchBeginPositionP37019662) + 1)), '}'), '')))), '[a-z]', '')) AS ?step1675) . BIND((STRLEN(SUBSTR(?targetMotifMatchCigarP37019MF_01128663, 1, (STRLEN(?targetMotifMatchCigarP37019MF_01128663) - STRLEN(REPLACE(?targetMotifMatchCigarP37019MF_01128663, CONCAT('^(?:[a-z]*(?:[A-Z]|-)){', STR(?step1675), '}'), ''))))) - STRLEN(REPLACE(SUBSTR(?targetMotifMatchCigarP37019MF_01128663, 1, (STRLEN(?targetMotifMatchCigarP37019MF_01128663) - STRLEN(REPLACE(?targetMotifMatchCigarP37019MF_01128663, CONCAT('^(?:[a-z]*(?:[A-Z]|-)){', STR(?step1675), '}'), '')))), '[^-]', ''))) AS ?step2676) . BIND(((?step2676 + ?targetMotifMatchRegionMatchBeginPositionMF_01128664) - 1) AS ?thisPositionOn163) . BIND(?this AS ?pfs2t677) . BIND(URI(CONCAT(STR(?thisSequence), '#position', STR(?thisPositionOn162))) AS ?pfsb160) . BIND(URI(CONCAT(STR(?thisSequence), '#position', STR(?thisPositionOn163))) AS ?pfse161) . FILTER ((BOUND(?thisPositionOn162) && BOUND(?thisPositionOn163))) . BIND(URI(CONCAT(STR(?this), '#MF_01128a159')) AS ?annotation159) . BIND(?this AS ?pfs158) . } OPTIONAL { ?this up:sequence ?thisSequence . ?thisSequence rdf:value ?thisSequenceValue . ?templateMotifMatch683 faldo:location ?templateMotifSequenceMatchRegionP37019684 ; edam:is_output_of ?templateMotifSequenceProfileAlignmentOperationP37019686 ; rdf:type edam:data_0869 ; rdf:value ?templateMotifCigarP37019MF_01128679 . ?templateMotifSequenceMatchRegionP37019684 faldo:begin ?templateMotifSequenceMatchBeginP37019685 . ?templateMotifSequenceMatchBeginP37019685 faldo:position ?templateMotifSequenceMatchBeginPositionP37019680 ; faldo:reference isoform:P37019-1 . ?templateMotifSequenceProfileAlignmentOperationP37019686 edam:has_input signature:MF_01128 ; rdf:type edam:operation_0300 . ?targetMotifMatch687 faldo:location ?targetMotifMatchRegionMatch688 ; edam:is_output_of ?targetMotifSequenceAlignmentOperationMF_01128690 ; rdf:type edam:data_0869 ; rdf:value ?targetMotifMatchCigarP37019MF_01128681 . ?targetMotifMatchRegionMatch688 faldo:begin ?targetMotifMatchRegionMatchBeginMF_01128689 . ?targetMotifMatchRegionMatchBeginMF_01128689 faldo:position ?targetMotifMatchRegionMatchBeginPositionMF_01128682 ; faldo:reference ?thisSequence . ?targetMotifSequenceAlignmentOperationMF_01128690 edam:has_input signature:MF_01128 ; rdf:type edam:operation_0300 . { ?this up:proteome <http://purl.uniprot.org/proteomes/Membrane#2>. } UNION { ?this up:proteome ?p678 . ?p678 skos:narrower <http://purl.uniprot.org/proteomes/Membrane#2>. } BIND(STRLEN(REPLACE(SUBSTR(?templateMotifCigarP37019MF_01128679, 1, (STRLEN(?templateMotifCigarP37019MF_01128679) - STRLEN(REPLACE(?templateMotifCigarP37019MF_01128679, CONCAT('^(?:-*[^-]){', STR(((355 - ?templateMotifSequenceMatchBeginPositionP37019680) + 1)), '}'), '')))), '[a-z]', '')) AS ?step1691) . BIND((STRLEN(SUBSTR(?targetMotifMatchCigarP37019MF_01128681, 1, (STRLEN(?targetMotifMatchCigarP37019MF_01128681) - STRLEN(REPLACE(?targetMotifMatchCigarP37019MF_01128681, CONCAT('^(?:[a-z]*(?:[A-Z]|-)){', STR(?step1691), '}'), ''))))) - STRLEN(REPLACE(SUBSTR(?targetMotifMatchCigarP37019MF_01128681, 1, (STRLEN(?targetMotifMatchCigarP37019MF_01128681) - STRLEN(REPLACE(?targetMotifMatchCigarP37019MF_01128681, CONCAT('^(?:[a-z]*(?:[A-Z]|-)){', STR(?step1691), '}'), '')))), '[^-]', ''))) AS ?step2692) . BIND(((?step2692 + ?targetMotifMatchRegionMatchBeginPositionMF_01128682) - 1) AS ?thisPositionOn168) . BIND(STRLEN(REPLACE(SUBSTR(?templateMotifCigarP37019MF_01128679, 1, (STRLEN(?templateMotifCigarP37019MF_01128679) - STRLEN(REPLACE(?templateMotifCigarP37019MF_01128679, CONCAT('^(?:-*[^-]){', STR(((376 - ?templateMotifSequenceMatchBeginPositionP37019680) + 1)), '}'), '')))), '[a-z]', '')) AS ?step1693) . BIND((STRLEN(SUBSTR(?targetMotifMatchCigarP37019MF_01128681, 1, (STRLEN(?targetMotifMatchCigarP37019MF_01128681) - STRLEN(REPLACE(?targetMotifMatchCigarP37019MF_01128681, CONCAT('^(?:[a-z]*(?:[A-Z]|-)){', STR(?step1693), '}'), ''))))) - STRLEN(REPLACE(SUBSTR(?targetMotifMatchCigarP37019MF_01128681, 1, (STRLEN(?targetMotifMatchCigarP37019MF_01128681) - STRLEN(REPLACE(?targetMotifMatchCigarP37019MF_01128681, CONCAT('^(?:[a-z]*(?:[A-Z]|-)){', STR(?step1693), '}'), '')))), '[^-]', ''))) AS ?step2694) . BIND(((?step2694 + ?targetMotifMatchRegionMatchBeginPositionMF_01128682) - 1) AS ?thisPositionOn169) . BIND(?this AS ?pfs2t695) . BIND(URI(CONCAT(STR(?thisSequence), '#position', STR(?thisPositionOn168))) AS ?pfsb166) . BIND(URI(CONCAT(STR(?thisSequence), '#position', STR(?thisPositionOn169))) AS ?pfse167) . FILTER ((BOUND(?thisPositionOn168) && BOUND(?thisPositionOn169))) . BIND(URI(CONCAT(STR(?this), '#MF_01128a165')) AS ?annotation165) . BIND(?this AS ?pfs164) . } OPTIONAL { ?this up:sequence ?thisSequence . ?thisSequence rdf:value ?thisSequenceValue . ?templateMotifMatch701 faldo:location ?templateMotifSequenceMatchRegionP37019702 ; edam:is_output_of ?templateMotifSequenceProfileAlignmentOperationP37019704 ; rdf:type edam:data_0869 ; rdf:value ?templateMotifCigarP37019MF_01128697 . ?templateMotifSequenceMatchRegionP37019702 faldo:begin ?templateMotifSequenceMatchBeginP37019703 . ?templateMotifSequenceMatchBeginP37019703 faldo:position ?templateMotifSequenceMatchBeginPositionP37019698 ; faldo:reference isoform:P37019-1 . ?templateMotifSequenceProfileAlignmentOperationP37019704 edam:has_input signature:MF_01128 ; rdf:type edam:operation_0300 . ?targetMotifMatch705 faldo:location ?targetMotifMatchRegionMatch706 ; edam:is_output_of ?targetMotifSequenceAlignmentOperationMF_01128708 ; rdf:type edam:data_0869 ; rdf:value ?targetMotifMatchCigarP37019MF_01128699 . ?targetMotifMatchRegionMatch706 faldo:begin ?targetMotifMatchRegionMatchBeginMF_01128707 . ?targetMotifMatchRegionMatchBeginMF_01128707 faldo:position ?targetMotifMatchRegionMatchBeginPositionMF_01128700 ; faldo:reference ?thisSequence . ?targetMotifSequenceAlignmentOperationMF_01128708 edam:has_input signature:MF_01128 ; rdf:type edam:operation_0300 . { ?this up:proteome <http://purl.uniprot.org/proteomes/Membrane#2>. } UNION { ?this up:proteome ?p696 . ?p696 skos:narrower <http://purl.uniprot.org/proteomes/Membrane#2>. } BIND(STRLEN(REPLACE(SUBSTR(?templateMotifCigarP37019MF_01128697, 1, (STRLEN(?templateMotifCigarP37019MF_01128697) - STRLEN(REPLACE(?templateMotifCigarP37019MF_01128697, CONCAT('^(?:-*[^-]){', STR(((377 - ?templateMotifSequenceMatchBeginPositionP37019698) + 1)), '}'), '')))), '[a-z]', '')) AS ?step1709) . BIND((STRLEN(SUBSTR(?targetMotifMatchCigarP37019MF_01128699, 1, (STRLEN(?targetMotifMatchCigarP37019MF_01128699) - STRLEN(REPLACE(?targetMotifMatchCigarP37019MF_01128699, CONCAT('^(?:[a-z]*(?:[A-Z]|-)){', STR(?step1709), '}'), ''))))) - STRLEN(REPLACE(SUBSTR(?targetMotifMatchCigarP37019MF_01128699, 1, (STRLEN(?targetMotifMatchCigarP37019MF_01128699) - STRLEN(REPLACE(?targetMotifMatchCigarP37019MF_01128699, CONCAT('^(?:[a-z]*(?:[A-Z]|-)){', STR(?step1709), '}'), '')))), '[^-]', ''))) AS ?step2710) . BIND(((?step2710 + ?targetMotifMatchRegionMatchBeginPositionMF_01128700) - 1) AS ?thisPositionOn174) . BIND(STRLEN(REPLACE(SUBSTR(?templateMotifCigarP37019MF_01128697, 1, (STRLEN(?templateMotifCigarP37019MF_01128697) - STRLEN(REPLACE(?templateMotifCigarP37019MF_01128697, CONCAT('^(?:-*[^-]){', STR(((386 - ?templateMotifSequenceMatchBeginPositionP37019698) + 1)), '}'), '')))), '[a-z]', '')) AS ?step1711) . BIND((STRLEN(SUBSTR(?targetMotifMatchCigarP37019MF_01128699, 1, (STRLEN(?targetMotifMatchCigarP37019MF_01128699) - STRLEN(REPLACE(?targetMotifMatchCigarP37019MF_01128699, CONCAT('^(?:[a-z]*(?:[A-Z]|-)){', STR(?step1711), '}'), ''))))) - STRLEN(REPLACE(SUBSTR(?targetMotifMatchCigarP37019MF_01128699, 1, (STRLEN(?targetMotifMatchCigarP37019MF_01128699) - STRLEN(REPLACE(?targetMotifMatchCigarP37019MF_01128699, CONCAT('^(?:[a-z]*(?:[A-Z]|-)){', STR(?step1711), '}'), '')))), '[^-]', ''))) AS ?step2712) . BIND(((?step2712 + ?targetMotifMatchRegionMatchBeginPositionMF_01128700) - 1) AS ?thisPositionOn175) . BIND(?this AS ?pfs2t713) . BIND(URI(CONCAT(STR(?thisSequence), '#position', STR(?thisPositionOn174))) AS ?pfsb172) . BIND(URI(CONCAT(STR(?thisSequence), '#position', STR(?thisPositionOn175))) AS ?pfse173) . FILTER ((BOUND(?thisPositionOn174) && BOUND(?thisPositionOn175))) . BIND(URI(CONCAT(STR(?this), '#MF_01128a171')) AS ?annotation171) . BIND(?this AS ?pfs170) . } OPTIONAL { ?this up:sequence ?thisSequence . ?thisSequence rdf:value ?thisSequenceValue . ?templateMotifMatch719 faldo:location ?templateMotifSequenceMatchRegionP37019720 ; edam:is_output_of ?templateMotifSequenceProfileAlignmentOperationP37019722 ; rdf:type edam:data_0869 ; rdf:value ?templateMotifCigarP37019MF_01128715 . ?templateMotifSequenceMatchRegionP37019720 faldo:begin ?templateMotifSequenceMatchBeginP37019721 . ?templateMotifSequenceMatchBeginP37019721 faldo:position ?templateMotifSequenceMatchBeginPositionP37019716 ; faldo:reference isoform:P37019-1 . ?templateMotifSequenceProfileAlignmentOperationP37019722 edam:has_input signature:MF_01128 ; rdf:type edam:operation_0300 . ?targetMotifMatch723 faldo:location ?targetMotifMatchRegionMatch724 ; edam:is_output_of ?targetMotifSequenceAlignmentOperationMF_01128726 ; rdf:type edam:data_0869 ; rdf:value ?targetMotifMatchCigarP37019MF_01128717 . ?targetMotifMatchRegionMatch724 faldo:begin ?targetMotifMatchRegionMatchBeginMF_01128725 . ?targetMotifMatchRegionMatchBeginMF_01128725 faldo:position ?targetMotifMatchRegionMatchBeginPositionMF_01128718 ; faldo:reference ?thisSequence . ?targetMotifSequenceAlignmentOperationMF_01128726 edam:has_input signature:MF_01128 ; rdf:type edam:operation_0300 . { ?this up:proteome <http://purl.uniprot.org/proteomes/Membrane#2>. } UNION { ?this up:proteome ?p714 . ?p714 skos:narrower <http://purl.uniprot.org/proteomes/Membrane#2>. } BIND(STRLEN(REPLACE(SUBSTR(?templateMotifCigarP37019MF_01128715, 1, (STRLEN(?templateMotifCigarP37019MF_01128715) - STRLEN(REPLACE(?templateMotifCigarP37019MF_01128715, CONCAT('^(?:-*[^-]){', STR(((387 - ?templateMotifSequenceMatchBeginPositionP37019716) + 1)), '}'), '')))), '[a-z]', '')) AS ?step1727) . BIND((STRLEN(SUBSTR(?targetMotifMatchCigarP37019MF_01128717, 1, (STRLEN(?targetMotifMatchCigarP37019MF_01128717) - STRLEN(REPLACE(?targetMotifMatchCigarP37019MF_01128717, CONCAT('^(?:[a-z]*(?:[A-Z]|-)){', STR(?step1727), '}'), ''))))) - STRLEN(REPLACE(SUBSTR(?targetMotifMatchCigarP37019MF_01128717, 1, (STRLEN(?targetMotifMatchCigarP37019MF_01128717) - STRLEN(REPLACE(?targetMotifMatchCigarP37019MF_01128717, CONCAT('^(?:[a-z]*(?:[A-Z]|-)){', STR(?step1727), '}'), '')))), '[^-]', ''))) AS ?step2728) . BIND(((?step2728 + ?targetMotifMatchRegionMatchBeginPositionMF_01128718) - 1) AS ?thisPositionOn180) . BIND(STRLEN(REPLACE(SUBSTR(?templateMotifCigarP37019MF_01128715, 1, (STRLEN(?templateMotifCigarP37019MF_01128715) - STRLEN(REPLACE(?templateMotifCigarP37019MF_01128715, CONCAT('^(?:-*[^-]){', STR(((401 - ?templateMotifSequenceMatchBeginPositionP37019716) + 1)), '}'), '')))), '[a-z]', '')) AS ?step1729) . BIND((STRLEN(SUBSTR(?targetMotifMatchCigarP37019MF_01128717, 1, (STRLEN(?targetMotifMatchCigarP37019MF_01128717) - STRLEN(REPLACE(?targetMotifMatchCigarP37019MF_01128717, CONCAT('^(?:[a-z]*(?:[A-Z]|-)){', STR(?step1729), '}'), ''))))) - STRLEN(REPLACE(SUBSTR(?targetMotifMatchCigarP37019MF_01128717, 1, (STRLEN(?targetMotifMatchCigarP37019MF_01128717) - STRLEN(REPLACE(?targetMotifMatchCigarP37019MF_01128717, CONCAT('^(?:[a-z]*(?:[A-Z]|-)){', STR(?step1729), '}'), '')))), '[^-]', ''))) AS ?step2730) . BIND(((?step2730 + ?targetMotifMatchRegionMatchBeginPositionMF_01128718) - 1) AS ?thisPositionOn181) . BIND(?this AS ?pfs2t731) . BIND(URI(CONCAT(STR(?thisSequence), '#position', STR(?thisPositionOn180))) AS ?pfsb178) . BIND(URI(CONCAT(STR(?thisSequence), '#position', STR(?thisPositionOn181))) AS ?pfse179) . FILTER ((BOUND(?thisPositionOn180) && BOUND(?thisPositionOn181))) . BIND(URI(CONCAT(STR(?this), '#MF_01128a177')) AS ?annotation177) . BIND(?this AS ?pfs176) . } OPTIONAL { ?this up:sequence ?thisSequence . ?thisSequence rdf:value ?thisSequenceValue . ?templateMotifMatch737 faldo:location ?templateMotifSequenceMatchRegionP37019738 ; edam:is_output_of ?templateMotifSequenceProfileAlignmentOperationP37019740 ; rdf:type edam:data_0869 ; rdf:value ?templateMotifCigarP37019MF_01128733 . ?templateMotifSequenceMatchRegionP37019738 faldo:begin ?templateMotifSequenceMatchBeginP37019739 . ?templateMotifSequenceMatchBeginP37019739 faldo:position ?templateMotifSequenceMatchBeginPositionP37019734 ; faldo:reference isoform:P37019-1 . ?templateMotifSequenceProfileAlignmentOperationP37019740 edam:has_input signature:MF_01128 ; rdf:type edam:operation_0300 . ?targetMotifMatch741 faldo:location ?targetMotifMatchRegionMatch742 ; edam:is_output_of ?targetMotifSequenceAlignmentOperationMF_01128744 ; rdf:type edam:data_0869 ; rdf:value ?targetMotifMatchCigarP37019MF_01128735 . ?targetMotifMatchRegionMatch742 faldo:begin ?targetMotifMatchRegionMatchBeginMF_01128743 . ?targetMotifMatchRegionMatchBeginMF_01128743 faldo:position ?targetMotifMatchRegionMatchBeginPositionMF_01128736 ; faldo:reference ?thisSequence . ?targetMotifSequenceAlignmentOperationMF_01128744 edam:has_input signature:MF_01128 ; rdf:type edam:operation_0300 . { ?this up:proteome <http://purl.uniprot.org/proteomes/Membrane#2>. } UNION { ?this up:proteome ?p732 . ?p732 skos:narrower <http://purl.uniprot.org/proteomes/Membrane#2>. } BIND(STRLEN(REPLACE(SUBSTR(?templateMotifCigarP37019MF_01128733, 1, (STRLEN(?templateMotifCigarP37019MF_01128733) - STRLEN(REPLACE(?templateMotifCigarP37019MF_01128733, CONCAT('^(?:-*[^-]){', STR(((402 - ?templateMotifSequenceMatchBeginPositionP37019734) + 1)), '}'), '')))), '[a-z]', '')) AS ?step1745) . BIND((STRLEN(SUBSTR(?targetMotifMatchCigarP37019MF_01128735, 1, (STRLEN(?targetMotifMatchCigarP37019MF_01128735) - STRLEN(REPLACE(?targetMotifMatchCigarP37019MF_01128735, CONCAT('^(?:[a-z]*(?:[A-Z]|-)){', STR(?step1745), '}'), ''))))) - STRLEN(REPLACE(SUBSTR(?targetMotifMatchCigarP37019MF_01128735, 1, (STRLEN(?targetMotifMatchCigarP37019MF_01128735) - STRLEN(REPLACE(?targetMotifMatchCigarP37019MF_01128735, CONCAT('^(?:[a-z]*(?:[A-Z]|-)){', STR(?step1745), '}'), '')))), '[^-]', ''))) AS ?step2746) . BIND(((?step2746 + ?targetMotifMatchRegionMatchBeginPositionMF_01128736) - 1) AS ?thisPositionOn186) . BIND(STRLEN(REPLACE(SUBSTR(?templateMotifCigarP37019MF_01128733, 1, (STRLEN(?templateMotifCigarP37019MF_01128733) - STRLEN(REPLACE(?templateMotifCigarP37019MF_01128733, CONCAT('^(?:-*[^-]){', STR(((404 - ?templateMotifSequenceMatchBeginPositionP37019734) + 1)), '}'), '')))), '[a-z]', '')) AS ?step1747) . BIND((STRLEN(SUBSTR(?targetMotifMatchCigarP37019MF_01128735, 1, (STRLEN(?targetMotifMatchCigarP37019MF_01128735) - STRLEN(REPLACE(?targetMotifMatchCigarP37019MF_01128735, CONCAT('^(?:[a-z]*(?:[A-Z]|-)){', STR(?step1747), '}'), ''))))) - STRLEN(REPLACE(SUBSTR(?targetMotifMatchCigarP37019MF_01128735, 1, (STRLEN(?targetMotifMatchCigarP37019MF_01128735) - STRLEN(REPLACE(?targetMotifMatchCigarP37019MF_01128735, CONCAT('^(?:[a-z]*(?:[A-Z]|-)){', STR(?step1747), '}'), '')))), '[^-]', ''))) AS ?step2748) . BIND(((?step2748 + ?targetMotifMatchRegionMatchBeginPositionMF_01128736) - 1) AS ?thisPositionOn187) . BIND(?this AS ?pfs2t749) . BIND(URI(CONCAT(STR(?thisSequence), '#position', STR(?thisPositionOn186))) AS ?pfsb184) . BIND(URI(CONCAT(STR(?thisSequence), '#position', STR(?thisPositionOn187))) AS ?pfse185) . FILTER ((BOUND(?thisPositionOn186) && BOUND(?thisPositionOn187))) . BIND(URI(CONCAT(STR(?this), '#MF_01128a183')) AS ?annotation183) . BIND(?this AS ?pfs182) . } OPTIONAL { ?this up:sequence ?thisSequence . ?thisSequence rdf:value ?thisSequenceValue . ?templateMotifMatch755 faldo:location ?templateMotifSequenceMatchRegionP37019756 ; edam:is_output_of ?templateMotifSequenceProfileAlignmentOperationP37019758 ; rdf:type edam:data_0869 ; rdf:value ?templateMotifCigarP37019MF_01128751 . ?templateMotifSequenceMatchRegionP37019756 faldo:begin ?templateMotifSequenceMatchBeginP37019757 . ?templateMotifSequenceMatchBeginP37019757 faldo:position ?templateMotifSequenceMatchBeginPositionP37019752 ; faldo:reference isoform:P37019-1 . ?templateMotifSequenceProfileAlignmentOperationP37019758 edam:has_input signature:MF_01128 ; rdf:type edam:operation_0300 . ?targetMotifMatch759 faldo:location ?targetMotifMatchRegionMatch760 ; edam:is_output_of ?targetMotifSequenceAlignmentOperationMF_01128762 ; rdf:type edam:data_0869 ; rdf:value ?targetMotifMatchCigarP37019MF_01128753 . ?targetMotifMatchRegionMatch760 faldo:begin ?targetMotifMatchRegionMatchBeginMF_01128761 . ?targetMotifMatchRegionMatchBeginMF_01128761 faldo:position ?targetMotifMatchRegionMatchBeginPositionMF_01128754 ; faldo:reference ?thisSequence . ?targetMotifSequenceAlignmentOperationMF_01128762 edam:has_input signature:MF_01128 ; rdf:type edam:operation_0300 . { ?this up:proteome <http://purl.uniprot.org/proteomes/Membrane#2>. } UNION { ?this up:proteome ?p750 . ?p750 skos:narrower <http://purl.uniprot.org/proteomes/Membrane#2>. } BIND(STRLEN(REPLACE(SUBSTR(?templateMotifCigarP37019MF_01128751, 1, (STRLEN(?templateMotifCigarP37019MF_01128751) - STRLEN(REPLACE(?templateMotifCigarP37019MF_01128751, CONCAT('^(?:-*[^-]){', STR(((405 - ?templateMotifSequenceMatchBeginPositionP37019752) + 1)), '}'), '')))), '[a-z]', '')) AS ?step1763) . BIND((STRLEN(SUBSTR(?targetMotifMatchCigarP37019MF_01128753, 1, (STRLEN(?targetMotifMatchCigarP37019MF_01128753) - STRLEN(REPLACE(?targetMotifMatchCigarP37019MF_01128753, CONCAT('^(?:[a-z]*(?:[A-Z]|-)){', STR(?step1763), '}'), ''))))) - STRLEN(REPLACE(SUBSTR(?targetMotifMatchCigarP37019MF_01128753, 1, (STRLEN(?targetMotifMatchCigarP37019MF_01128753) - STRLEN(REPLACE(?targetMotifMatchCigarP37019MF_01128753, CONCAT('^(?:[a-z]*(?:[A-Z]|-)){', STR(?step1763), '}'), '')))), '[^-]', ''))) AS ?step2764) . BIND(((?step2764 + ?targetMotifMatchRegionMatchBeginPositionMF_01128754) - 1) AS ?thisPositionOn192) . BIND(STRLEN(REPLACE(SUBSTR(?templateMotifCigarP37019MF_01128751, 1, (STRLEN(?templateMotifCigarP37019MF_01128751) - STRLEN(REPLACE(?templateMotifCigarP37019MF_01128751, CONCAT('^(?:-*[^-]){', STR(((416 - ?templateMotifSequenceMatchBeginPositionP37019752) + 1)), '}'), '')))), '[a-z]', '')) AS ?step1765) . BIND((STRLEN(SUBSTR(?targetMotifMatchCigarP37019MF_01128753, 1, (STRLEN(?targetMotifMatchCigarP37019MF_01128753) - STRLEN(REPLACE(?targetMotifMatchCigarP37019MF_01128753, CONCAT('^(?:[a-z]*(?:[A-Z]|-)){', STR(?step1765), '}'), ''))))) - STRLEN(REPLACE(SUBSTR(?targetMotifMatchCigarP37019MF_01128753, 1, (STRLEN(?targetMotifMatchCigarP37019MF_01128753) - STRLEN(REPLACE(?targetMotifMatchCigarP37019MF_01128753, CONCAT('^(?:[a-z]*(?:[A-Z]|-)){', STR(?step1765), '}'), '')))), '[^-]', ''))) AS ?step2766) . BIND(((?step2766 + ?targetMotifMatchRegionMatchBeginPositionMF_01128754) - 1) AS ?thisPositionOn193) . BIND(?this AS ?pfs2t767) . BIND(URI(CONCAT(STR(?thisSequence), '#position', STR(?thisPositionOn192))) AS ?pfsb190) . BIND(URI(CONCAT(STR(?thisSequence), '#position', STR(?thisPositionOn193))) AS ?pfse191) . FILTER ((BOUND(?thisPositionOn192) && BOUND(?thisPositionOn193))) . BIND(URI(CONCAT(STR(?this), '#MF_01128a189')) AS ?annotation189) . BIND(?this AS ?pfs188) . } OPTIONAL { ?this up:sequence ?thisSequence . ?thisSequence rdf:value ?thisSequenceValue . ?templateMotifMatch773 faldo:location ?templateMotifSequenceMatchRegionP37019774 ; edam:is_output_of ?templateMotifSequenceProfileAlignmentOperationP37019776 ; rdf:type edam:data_0869 ; rdf:value ?templateMotifCigarP37019MF_01128769 . ?templateMotifSequenceMatchRegionP37019774 faldo:begin ?templateMotifSequenceMatchBeginP37019775 . ?templateMotifSequenceMatchBeginP37019775 faldo:position ?templateMotifSequenceMatchBeginPositionP37019770 ; faldo:reference isoform:P37019-1 . ?templateMotifSequenceProfileAlignmentOperationP37019776 edam:has_input signature:MF_01128 ; rdf:type edam:operation_0300 . ?targetMotifMatch777 faldo:location ?targetMotifMatchRegionMatch778 ; edam:is_output_of ?targetMotifSequenceAlignmentOperationMF_01128780 ; rdf:type edam:data_0869 ; rdf:value ?targetMotifMatchCigarP37019MF_01128771 . ?targetMotifMatchRegionMatch778 faldo:begin ?targetMotifMatchRegionMatchBeginMF_01128779 . ?targetMotifMatchRegionMatchBeginMF_01128779 faldo:position ?targetMotifMatchRegionMatchBeginPositionMF_01128772 ; faldo:reference ?thisSequence . ?targetMotifSequenceAlignmentOperationMF_01128780 edam:has_input signature:MF_01128 ; rdf:type edam:operation_0300 . { ?this up:proteome <http://purl.uniprot.org/proteomes/Membrane#2>. } UNION { ?this up:proteome ?p768 . ?p768 skos:narrower <http://purl.uniprot.org/proteomes/Membrane#2>. } BIND(STRLEN(REPLACE(SUBSTR(?templateMotifCigarP37019MF_01128769, 1, (STRLEN(?templateMotifCigarP37019MF_01128769) - STRLEN(REPLACE(?templateMotifCigarP37019MF_01128769, CONCAT('^(?:-*[^-]){', STR(((417 - ?templateMotifSequenceMatchBeginPositionP37019770) + 1)), '}'), '')))), '[a-z]', '')) AS ?step1781) . BIND((STRLEN(SUBSTR(?targetMotifMatchCigarP37019MF_01128771, 1, (STRLEN(?targetMotifMatchCigarP37019MF_01128771) - STRLEN(REPLACE(?targetMotifMatchCigarP37019MF_01128771, CONCAT('^(?:[a-z]*(?:[A-Z]|-)){', STR(?step1781), '}'), ''))))) - STRLEN(REPLACE(SUBSTR(?targetMotifMatchCigarP37019MF_01128771, 1, (STRLEN(?targetMotifMatchCigarP37019MF_01128771) - STRLEN(REPLACE(?targetMotifMatchCigarP37019MF_01128771, CONCAT('^(?:[a-z]*(?:[A-Z]|-)){', STR(?step1781), '}'), '')))), '[^-]', ''))) AS ?step2782) . BIND(((?step2782 + ?targetMotifMatchRegionMatchBeginPositionMF_01128772) - 1) AS ?thisPositionOn198) . BIND(STRLEN(REPLACE(SUBSTR(?templateMotifCigarP37019MF_01128769, 1, (STRLEN(?templateMotifCigarP37019MF_01128769) - STRLEN(REPLACE(?templateMotifCigarP37019MF_01128769, CONCAT('^(?:-*[^-]){', STR(((421 - ?templateMotifSequenceMatchBeginPositionP37019770) + 1)), '}'), '')))), '[a-z]', '')) AS ?step1783) . BIND((STRLEN(SUBSTR(?targetMotifMatchCigarP37019MF_01128771, 1, (STRLEN(?targetMotifMatchCigarP37019MF_01128771) - STRLEN(REPLACE(?targetMotifMatchCigarP37019MF_01128771, CONCAT('^(?:[a-z]*(?:[A-Z]|-)){', STR(?step1783), '}'), ''))))) - STRLEN(REPLACE(SUBSTR(?targetMotifMatchCigarP37019MF_01128771, 1, (STRLEN(?targetMotifMatchCigarP37019MF_01128771) - STRLEN(REPLACE(?targetMotifMatchCigarP37019MF_01128771, CONCAT('^(?:[a-z]*(?:[A-Z]|-)){', STR(?step1783), '}'), '')))), '[^-]', ''))) AS ?step2784) . BIND(((?step2784 + ?targetMotifMatchRegionMatchBeginPositionMF_01128772) - 1) AS ?thisPositionOn199) . BIND(?this AS ?pfs2t785) . BIND(URI(CONCAT(STR(?thisSequence), '#position', STR(?thisPositionOn198))) AS ?pfsb196) . BIND(URI(CONCAT(STR(?thisSequence), '#position', STR(?thisPositionOn199))) AS ?pfse197) . FILTER ((BOUND(?thisPositionOn198) && BOUND(?thisPositionOn199))) . BIND(URI(CONCAT(STR(?this), '#MF_01128a195')) AS ?annotation195) . BIND(?this AS ?pfs194) . } OPTIONAL { ?this up:sequence ?thisSequence . ?thisSequence rdf:value ?thisSequenceValue . ?templateMotifMatch791 faldo:location ?templateMotifSequenceMatchRegionP37019792 ; edam:is_output_of ?templateMotifSequenceProfileAlignmentOperationP37019794 ; rdf:type edam:data_0869 ; rdf:value ?templateMotifCigarP37019MF_01128787 . ?templateMotifSequenceMatchRegionP37019792 faldo:begin ?templateMotifSequenceMatchBeginP37019793 . ?templateMotifSequenceMatchBeginP37019793 faldo:position ?templateMotifSequenceMatchBeginPositionP37019788 ; faldo:reference isoform:P37019-1 . ?templateMotifSequenceProfileAlignmentOperationP37019794 edam:has_input signature:MF_01128 ; rdf:type edam:operation_0300 . ?targetMotifMatch795 faldo:location ?targetMotifMatchRegionMatch796 ; edam:is_output_of ?targetMotifSequenceAlignmentOperationMF_01128798 ; rdf:type edam:data_0869 ; rdf:value ?targetMotifMatchCigarP37019MF_01128789 . ?targetMotifMatchRegionMatch796 faldo:begin ?targetMotifMatchRegionMatchBeginMF_01128797 . ?targetMotifMatchRegionMatchBeginMF_01128797 faldo:position ?targetMotifMatchRegionMatchBeginPositionMF_01128790 ; faldo:reference ?thisSequence . ?targetMotifSequenceAlignmentOperationMF_01128798 edam:has_input signature:MF_01128 ; rdf:type edam:operation_0300 . { ?this up:proteome <http://purl.uniprot.org/proteomes/Membrane#2>. } UNION { ?this up:proteome ?p786 . ?p786 skos:narrower <http://purl.uniprot.org/proteomes/Membrane#2>. } BIND(STRLEN(REPLACE(SUBSTR(?templateMotifCigarP37019MF_01128787, 1, (STRLEN(?templateMotifCigarP37019MF_01128787) - STRLEN(REPLACE(?templateMotifCigarP37019MF_01128787, CONCAT('^(?:-*[^-]){', STR(((422 - ?templateMotifSequenceMatchBeginPositionP37019788) + 1)), '}'), '')))), '[a-z]', '')) AS ?step1799) . BIND((STRLEN(SUBSTR(?targetMotifMatchCigarP37019MF_01128789, 1, (STRLEN(?targetMotifMatchCigarP37019MF_01128789) - STRLEN(REPLACE(?targetMotifMatchCigarP37019MF_01128789, CONCAT('^(?:[a-z]*(?:[A-Z]|-)){', STR(?step1799), '}'), ''))))) - STRLEN(REPLACE(SUBSTR(?targetMotifMatchCigarP37019MF_01128789, 1, (STRLEN(?targetMotifMatchCigarP37019MF_01128789) - STRLEN(REPLACE(?targetMotifMatchCigarP37019MF_01128789, CONCAT('^(?:[a-z]*(?:[A-Z]|-)){', STR(?step1799), '}'), '')))), '[^-]', ''))) AS ?step2800) . BIND(((?step2800 + ?targetMotifMatchRegionMatchBeginPositionMF_01128790) - 1) AS ?thisPositionOn204) . BIND(STRLEN(REPLACE(SUBSTR(?templateMotifCigarP37019MF_01128787, 1, (STRLEN(?templateMotifCigarP37019MF_01128787) - STRLEN(REPLACE(?templateMotifCigarP37019MF_01128787, CONCAT('^(?:-*[^-]){', STR(((438 - ?templateMotifSequenceMatchBeginPositionP37019788) + 1)), '}'), '')))), '[a-z]', '')) AS ?step1801) . BIND((STRLEN(SUBSTR(?targetMotifMatchCigarP37019MF_01128789, 1, (STRLEN(?targetMotifMatchCigarP37019MF_01128789) - STRLEN(REPLACE(?targetMotifMatchCigarP37019MF_01128789, CONCAT('^(?:[a-z]*(?:[A-Z]|-)){', STR(?step1801), '}'), ''))))) - STRLEN(REPLACE(SUBSTR(?targetMotifMatchCigarP37019MF_01128789, 1, (STRLEN(?targetMotifMatchCigarP37019MF_01128789) - STRLEN(REPLACE(?targetMotifMatchCigarP37019MF_01128789, CONCAT('^(?:[a-z]*(?:[A-Z]|-)){', STR(?step1801), '}'), '')))), '[^-]', ''))) AS ?step2802) . BIND(((?step2802 + ?targetMotifMatchRegionMatchBeginPositionMF_01128790) - 1) AS ?thisPositionOn205) . BIND(?this AS ?pfs2t803) . BIND(URI(CONCAT(STR(?thisSequence), '#position', STR(?thisPositionOn204))) AS ?pfsb202) . BIND(URI(CONCAT(STR(?thisSequence), '#position', STR(?thisPositionOn205))) AS ?pfse203) . FILTER ((BOUND(?thisPositionOn204) && BOUND(?thisPositionOn205))) . BIND(URI(CONCAT(STR(?this), '#MF_01128a201')) AS ?annotation201) . BIND(?this AS ?pfs200) . } OPTIONAL { ?this up:sequence ?thisSequence . ?thisSequence rdf:value ?thisSequenceValue . ?templateMotifMatch809 faldo:location ?templateMotifSequenceMatchRegionP37019810 ; edam:is_output_of ?templateMotifSequenceProfileAlignmentOperationP37019812 ; rdf:type edam:data_0869 ; rdf:value ?templateMotifCigarP37019MF_01128805 . ?templateMotifSequenceMatchRegionP37019810 faldo:begin ?templateMotifSequenceMatchBeginP37019811 . ?templateMotifSequenceMatchBeginP37019811 faldo:position ?templateMotifSequenceMatchBeginPositionP37019806 ; faldo:reference isoform:P37019-1 . ?templateMotifSequenceProfileAlignmentOperationP37019812 edam:has_input signature:MF_01128 ; rdf:type edam:operation_0300 . ?targetMotifMatch813 faldo:location ?targetMotifMatchRegionMatch814 ; edam:is_output_of ?targetMotifSequenceAlignmentOperationMF_01128816 ; rdf:type edam:data_0869 ; rdf:value ?targetMotifMatchCigarP37019MF_01128807 . ?targetMotifMatchRegionMatch814 faldo:begin ?targetMotifMatchRegionMatchBeginMF_01128815 . ?targetMotifMatchRegionMatchBeginMF_01128815 faldo:position ?targetMotifMatchRegionMatchBeginPositionMF_01128808 ; faldo:reference ?thisSequence . ?targetMotifSequenceAlignmentOperationMF_01128816 edam:has_input signature:MF_01128 ; rdf:type edam:operation_0300 . { ?this up:proteome <http://purl.uniprot.org/proteomes/Membrane#2>. } UNION { ?this up:proteome ?p804 . ?p804 skos:narrower <http://purl.uniprot.org/proteomes/Membrane#2>. } BIND(STRLEN(REPLACE(SUBSTR(?templateMotifCigarP37019MF_01128805, 1, (STRLEN(?templateMotifCigarP37019MF_01128805) - STRLEN(REPLACE(?templateMotifCigarP37019MF_01128805, CONCAT('^(?:-*[^-]){', STR(((439 - ?templateMotifSequenceMatchBeginPositionP37019806) + 1)), '}'), '')))), '[a-z]', '')) AS ?step1817) . BIND((STRLEN(SUBSTR(?targetMotifMatchCigarP37019MF_01128807, 1, (STRLEN(?targetMotifMatchCigarP37019MF_01128807) - STRLEN(REPLACE(?targetMotifMatchCigarP37019MF_01128807, CONCAT('^(?:[a-z]*(?:[A-Z]|-)){', STR(?step1817), '}'), ''))))) - STRLEN(REPLACE(SUBSTR(?targetMotifMatchCigarP37019MF_01128807, 1, (STRLEN(?targetMotifMatchCigarP37019MF_01128807) - STRLEN(REPLACE(?targetMotifMatchCigarP37019MF_01128807, CONCAT('^(?:[a-z]*(?:[A-Z]|-)){', STR(?step1817), '}'), '')))), '[^-]', ''))) AS ?step2818) . BIND(((?step2818 + ?targetMotifMatchRegionMatchBeginPositionMF_01128808) - 1) AS ?thisPositionOn210) . BIND(STRLEN(?thisSequenceValue) AS ?thisPositionOn211) . BIND(?this AS ?pfs2t819) . BIND(URI(CONCAT(STR(?thisSequence), '#position', STR(?thisPositionOn210))) AS ?pfsb208) . BIND(URI(CONCAT(STR(?thisSequence), '#position', STR(?thisPositionOn211))) AS ?pfse209) . FILTER ((BOUND(?thisPositionOn210) && BOUND(?thisPositionOn211))) . BIND(URI(CONCAT(STR(?this), '#MF_01128a207')) AS ?annotation207) . BIND(?this AS ?pfs206) . } OPTIONAL { ?this up:sequence ?thisSequence . ?thisSequence rdf:value ?thisSequenceValue . ?templateMotifMatch825 faldo:location ?templateMotifSequenceMatchRegionP37019826 ; edam:is_output_of ?templateMotifSequenceProfileAlignmentOperationP37019828 ; rdf:type edam:data_0869 ; rdf:value ?templateMotifCigarP37019MF_01128821 . ?templateMotifSequenceMatchRegionP37019826 faldo:begin ?templateMotifSequenceMatchBeginP37019827 . ?templateMotifSequenceMatchBeginP37019827 faldo:position ?templateMotifSequenceMatchBeginPositionP37019822 ; faldo:reference isoform:P37019-1 . ?templateMotifSequenceProfileAlignmentOperationP37019828 edam:has_input signature:MF_01128 ; rdf:type edam:operation_0300 . ?targetMotifMatch829 faldo:location ?targetMotifMatchRegionMatch830 ; edam:is_output_of ?targetMotifSequenceAlignmentOperationMF_01128832 ; rdf:type edam:data_0869 ; rdf:value ?targetMotifMatchCigarP37019MF_01128823 . ?targetMotifMatchRegionMatch830 faldo:begin ?targetMotifMatchRegionMatchBeginMF_01128831 . ?targetMotifMatchRegionMatchBeginMF_01128831 faldo:position ?targetMotifMatchRegionMatchBeginPositionMF_01128824 ; faldo:reference ?thisSequence . ?targetMotifSequenceAlignmentOperationMF_01128832 edam:has_input signature:MF_01128 ; rdf:type edam:operation_0300 . { ?this up:proteome <http://purl.uniprot.org/proteomes/Membrane#2>. } UNION { ?this up:proteome ?p820 . ?p820 skos:narrower <http://purl.uniprot.org/proteomes/Membrane#2>. } BIND(STRLEN(REPLACE(SUBSTR(?templateMotifCigarP37019MF_01128821, 1, (STRLEN(?templateMotifCigarP37019MF_01128821) - STRLEN(REPLACE(?templateMotifCigarP37019MF_01128821, CONCAT('^(?:-*[^-]){', STR(((106 - ?templateMotifSequenceMatchBeginPositionP37019822) + 1)), '}'), '')))), '[a-z]', '')) AS ?step1833) . BIND((STRLEN(SUBSTR(?targetMotifMatchCigarP37019MF_01128823, 1, (STRLEN(?targetMotifMatchCigarP37019MF_01128823) - STRLEN(REPLACE(?targetMotifMatchCigarP37019MF_01128823, CONCAT('^(?:[a-z]*(?:[A-Z]|-)){', STR(?step1833), '}'), ''))))) - STRLEN(REPLACE(SUBSTR(?targetMotifMatchCigarP37019MF_01128823, 1, (STRLEN(?targetMotifMatchCigarP37019MF_01128823) - STRLEN(REPLACE(?targetMotifMatchCigarP37019MF_01128823, CONCAT('^(?:[a-z]*(?:[A-Z]|-)){', STR(?step1833), '}'), '')))), '[^-]', ''))) AS ?step2834) . BIND(((?step2834 + ?targetMotifMatchRegionMatchBeginPositionMF_01128824) - 1) AS ?thisPositionOn216) . BIND(STRLEN(REPLACE(SUBSTR(?templateMotifCigarP37019MF_01128821, 1, (STRLEN(?templateMotifCigarP37019MF_01128821) - STRLEN(REPLACE(?templateMotifCigarP37019MF_01128821, CONCAT('^(?:-*[^-]){', STR(((110 - ?templateMotifSequenceMatchBeginPositionP37019822) + 1)), '}'), '')))), '[a-z]', '')) AS ?step1835) . BIND((STRLEN(SUBSTR(?targetMotifMatchCigarP37019MF_01128823, 1, (STRLEN(?targetMotifMatchCigarP37019MF_01128823) - STRLEN(REPLACE(?targetMotifMatchCigarP37019MF_01128823, CONCAT('^(?:[a-z]*(?:[A-Z]|-)){', STR(?step1835), '}'), ''))))) - STRLEN(REPLACE(SUBSTR(?targetMotifMatchCigarP37019MF_01128823, 1, (STRLEN(?targetMotifMatchCigarP37019MF_01128823) - STRLEN(REPLACE(?targetMotifMatchCigarP37019MF_01128823, CONCAT('^(?:[a-z]*(?:[A-Z]|-)){', STR(?step1835), '}'), '')))), '[^-]', ''))) AS ?step2836) . BIND(((?step2836 + ?targetMotifMatchRegionMatchBeginPositionMF_01128824) - 1) AS ?thisPositionOn217) . BIND(?this AS ?pfs2t837) . BIND(URI(CONCAT(STR(?thisSequence), '#position', STR(?thisPositionOn216))) AS ?pfsb214) . BIND(URI(CONCAT(STR(?thisSequence), '#position', STR(?thisPositionOn217))) AS ?pfse215) . FILTER ((BOUND(?thisPositionOn216) && BOUND(?thisPositionOn217))) . BIND(URI(CONCAT(STR(?this), '#MF_01128a213')) AS ?annotation213) . BIND(?this AS ?pfs212) . } OPTIONAL { ?this up:sequence ?thisSequence . ?thisSequence rdf:value ?thisSequenceValue . ?templateMotifMatch843 faldo:location ?templateMotifSequenceMatchRegionP37019844 ; edam:is_output_of ?templateMotifSequenceProfileAlignmentOperationP37019846 ; rdf:type edam:data_0869 ; rdf:value ?templateMotifCigarP37019MF_01128839 . ?templateMotifSequenceMatchRegionP37019844 faldo:begin ?templateMotifSequenceMatchBeginP37019845 . ?templateMotifSequenceMatchBeginP37019845 faldo:position ?templateMotifSequenceMatchBeginPositionP37019840 ; faldo:reference isoform:P37019-1 . ?templateMotifSequenceProfileAlignmentOperationP37019846 edam:has_input signature:MF_01128 ; rdf:type edam:operation_0300 . ?targetMotifMatch847 faldo:location ?targetMotifMatchRegionMatch848 ; edam:is_output_of ?targetMotifSequenceAlignmentOperationMF_01128850 ; rdf:type edam:data_0869 ; rdf:value ?targetMotifMatchCigarP37019MF_01128841 . ?targetMotifMatchRegionMatch848 faldo:begin ?targetMotifMatchRegionMatchBeginMF_01128849 . ?targetMotifMatchRegionMatchBeginMF_01128849 faldo:position ?targetMotifMatchRegionMatchBeginPositionMF_01128842 ; faldo:reference ?thisSequence . ?targetMotifSequenceAlignmentOperationMF_01128850 edam:has_input signature:MF_01128 ; rdf:type edam:operation_0300 . { ?this up:proteome <http://purl.uniprot.org/proteomes/Membrane#2>. } UNION { ?this up:proteome ?p838 . ?p838 skos:narrower <http://purl.uniprot.org/proteomes/Membrane#2>. } BIND(STRLEN(REPLACE(SUBSTR(?templateMotifCigarP37019MF_01128839, 1, (STRLEN(?templateMotifCigarP37019MF_01128839) - STRLEN(REPLACE(?templateMotifCigarP37019MF_01128839, CONCAT('^(?:-*[^-]){', STR(((146 - ?templateMotifSequenceMatchBeginPositionP37019840) + 1)), '}'), '')))), '[a-z]', '')) AS ?step1851) . BIND((STRLEN(SUBSTR(?targetMotifMatchCigarP37019MF_01128841, 1, (STRLEN(?targetMotifMatchCigarP37019MF_01128841) - STRLEN(REPLACE(?targetMotifMatchCigarP37019MF_01128841, CONCAT('^(?:[a-z]*(?:[A-Z]|-)){', STR(?step1851), '}'), ''))))) - STRLEN(REPLACE(SUBSTR(?targetMotifMatchCigarP37019MF_01128841, 1, (STRLEN(?targetMotifMatchCigarP37019MF_01128841) - STRLEN(REPLACE(?targetMotifMatchCigarP37019MF_01128841, CONCAT('^(?:[a-z]*(?:[A-Z]|-)){', STR(?step1851), '}'), '')))), '[^-]', ''))) AS ?step2852) . BIND(((?step2852 + ?targetMotifMatchRegionMatchBeginPositionMF_01128842) - 1) AS ?thisPositionOn222) . BIND(STRLEN(REPLACE(SUBSTR(?templateMotifCigarP37019MF_01128839, 1, (STRLEN(?templateMotifCigarP37019MF_01128839) - STRLEN(REPLACE(?templateMotifCigarP37019MF_01128839, CONCAT('^(?:-*[^-]){', STR(((150 - ?templateMotifSequenceMatchBeginPositionP37019840) + 1)), '}'), '')))), '[a-z]', '')) AS ?step1853) . BIND((STRLEN(SUBSTR(?targetMotifMatchCigarP37019MF_01128841, 1, (STRLEN(?targetMotifMatchCigarP37019MF_01128841) - STRLEN(REPLACE(?targetMotifMatchCigarP37019MF_01128841, CONCAT('^(?:[a-z]*(?:[A-Z]|-)){', STR(?step1853), '}'), ''))))) - STRLEN(REPLACE(SUBSTR(?targetMotifMatchCigarP37019MF_01128841, 1, (STRLEN(?targetMotifMatchCigarP37019MF_01128841) - STRLEN(REPLACE(?targetMotifMatchCigarP37019MF_01128841, CONCAT('^(?:[a-z]*(?:[A-Z]|-)){', STR(?step1853), '}'), '')))), '[^-]', ''))) AS ?step2854) . BIND(((?step2854 + ?targetMotifMatchRegionMatchBeginPositionMF_01128842) - 1) AS ?thisPositionOn223) . BIND(?this AS ?pfs2t855) . BIND(URI(CONCAT(STR(?thisSequence), '#position', STR(?thisPositionOn222))) AS ?pfsb220) . BIND(URI(CONCAT(STR(?thisSequence), '#position', STR(?thisPositionOn223))) AS ?pfse221) . FILTER ((BOUND(?thisPositionOn222) && BOUND(?thisPositionOn223))) . BIND(URI(CONCAT(STR(?this), '#MF_01128a219')) AS ?annotation219) . BIND(?this AS ?pfs218) . } OPTIONAL { ?this up:sequence ?thisSequence . ?thisSequence rdf:value ?thisSequenceValue . ?templateMotifMatch861 faldo:location ?templateMotifSequenceMatchRegionP37019862 ; edam:is_output_of ?templateMotifSequenceProfileAlignmentOperationP37019864 ; rdf:type edam:data_0869 ; rdf:value ?templateMotifCigarP37019MF_01128857 . ?templateMotifSequenceMatchRegionP37019862 faldo:begin ?templateMotifSequenceMatchBeginP37019863 . ?templateMotifSequenceMatchBeginP37019863 faldo:position ?templateMotifSequenceMatchBeginPositionP37019858 ; faldo:reference isoform:P37019-1 . ?templateMotifSequenceProfileAlignmentOperationP37019864 edam:has_input signature:MF_01128 ; rdf:type edam:operation_0300 . ?targetMotifMatch865 faldo:location ?targetMotifMatchRegionMatch866 ; edam:is_output_of ?targetMotifSequenceAlignmentOperationMF_01128868 ; rdf:type edam:data_0869 ; rdf:value ?targetMotifMatchCigarP37019MF_01128859 . ?targetMotifMatchRegionMatch866 faldo:begin ?targetMotifMatchRegionMatchBeginMF_01128867 . ?targetMotifMatchRegionMatchBeginMF_01128867 faldo:position ?targetMotifMatchRegionMatchBeginPositionMF_01128860 ; faldo:reference ?thisSequence . ?targetMotifSequenceAlignmentOperationMF_01128868 edam:has_input signature:MF_01128 ; rdf:type edam:operation_0300 . { ?this up:proteome <http://purl.uniprot.org/proteomes/Membrane#2>. } UNION { ?this up:proteome ?p856 . ?p856 skos:narrower <http://purl.uniprot.org/proteomes/Membrane#2>. } BIND(STRLEN(REPLACE(SUBSTR(?templateMotifCigarP37019MF_01128857, 1, (STRLEN(?templateMotifCigarP37019MF_01128857) - STRLEN(REPLACE(?templateMotifCigarP37019MF_01128857, CONCAT('^(?:-*[^-]){', STR(((355 - ?templateMotifSequenceMatchBeginPositionP37019858) + 1)), '}'), '')))), '[a-z]', '')) AS ?step1869) . BIND((STRLEN(SUBSTR(?targetMotifMatchCigarP37019MF_01128859, 1, (STRLEN(?targetMotifMatchCigarP37019MF_01128859) - STRLEN(REPLACE(?targetMotifMatchCigarP37019MF_01128859, CONCAT('^(?:[a-z]*(?:[A-Z]|-)){', STR(?step1869), '}'), ''))))) - STRLEN(REPLACE(SUBSTR(?targetMotifMatchCigarP37019MF_01128859, 1, (STRLEN(?targetMotifMatchCigarP37019MF_01128859) - STRLEN(REPLACE(?targetMotifMatchCigarP37019MF_01128859, CONCAT('^(?:[a-z]*(?:[A-Z]|-)){', STR(?step1869), '}'), '')))), '[^-]', ''))) AS ?step2870) . BIND(((?step2870 + ?targetMotifMatchRegionMatchBeginPositionMF_01128860) - 1) AS ?thisPositionOn228) . BIND(STRLEN(REPLACE(SUBSTR(?templateMotifCigarP37019MF_01128857, 1, (STRLEN(?templateMotifCigarP37019MF_01128857) - STRLEN(REPLACE(?templateMotifCigarP37019MF_01128857, CONCAT('^(?:-*[^-]){', STR(((359 - ?templateMotifSequenceMatchBeginPositionP37019858) + 1)), '}'), '')))), '[a-z]', '')) AS ?step1871) . BIND((STRLEN(SUBSTR(?targetMotifMatchCigarP37019MF_01128859, 1, (STRLEN(?targetMotifMatchCigarP37019MF_01128859) - STRLEN(REPLACE(?targetMotifMatchCigarP37019MF_01128859, CONCAT('^(?:[a-z]*(?:[A-Z]|-)){', STR(?step1871), '}'), ''))))) - STRLEN(REPLACE(SUBSTR(?targetMotifMatchCigarP37019MF_01128859, 1, (STRLEN(?targetMotifMatchCigarP37019MF_01128859) - STRLEN(REPLACE(?targetMotifMatchCigarP37019MF_01128859, CONCAT('^(?:[a-z]*(?:[A-Z]|-)){', STR(?step1871), '}'), '')))), '[^-]', ''))) AS ?step2872) . BIND(((?step2872 + ?targetMotifMatchRegionMatchBeginPositionMF_01128860) - 1) AS ?thisPositionOn229) . BIND(?this AS ?pfs2t873) . BIND(URI(CONCAT(STR(?thisSequence), '#position', STR(?thisPositionOn228))) AS ?pfsb226) . BIND(URI(CONCAT(STR(?thisSequence), '#position', STR(?thisPositionOn229))) AS ?pfse227) . FILTER ((BOUND(?thisPositionOn228) && BOUND(?thisPositionOn229))) . BIND(URI(CONCAT(STR(?this), '#MF_01128a225')) AS ?annotation225) . BIND(?this AS ?pfs224) . } OPTIONAL { ?this a up:Protein . ?this up:organism ?thisOrganism . ?thisOrganism rdfs:subClassOf+ taxon:91347 . BIND(?this AS ?case6) . } OPTIONAL { ?this a up:Protein . ?this up:organism ?thisOrganism . FILTER (! (EXISTS { ?thisOrganism rdfs:subClassOf+ taxon:91347 . })) . BIND(?this AS ?case7) . } OPTIONAL { ?this a up:Protein . { ?this up:proteome <http://purl.uniprot.org/proteomes/Membrane#2>. } UNION { ?this up:proteome ?p874 . ?p874 skos:narrower <http://purl.uniprot.org/proteomes/Membrane#2>. } BIND(?this AS ?case8) . } OPTIONAL { ?this a up:Protein . { FILTER (! (EXISTS { { ?this up:proteome <http://purl.uniprot.org/proteomes/Membrane#any>. } UNION { ?this up:proteome ?p875 . ?p875 skos:narrower <http://purl.uniprot.org/proteomes/Membrane#any>. } })) . } UNION { { ?this up:proteome <http://purl.uniprot.org/proteomes/Membrane#1>. } UNION { ?this up:proteome ?p876 . ?p876 skos:narrower <http://purl.uniprot.org/proteomes/Membrane#1>. } } BIND(?this AS ?case9) . } OPTIONAL { ?this up:annotation ?samtransmembrane877 ; up:sequence ?thisSequence . ?samtransmembrane877 up:range ?samtransmembraner878 ; rdf:type up:Transmembrane_Annotation . ?samtransmembraner878 faldo:begin ?samtransmembraneb879 ; faldo:end ?samtransmembranee880 . ?samtransmembraneb879 faldo:position ?samtransmembranebp881 ; faldo:reference ?thisSequence . ?samtransmembranee880 faldo:position ?samtransmembraneep882 ; faldo:reference ?thisSequence . BIND(?this AS ?sam230) . } BIND(URI(CONCAT(STR(?this), '#MF_01128a236')) AS ?keyword236) . BIND(URI(CONCAT(STR(?this), '#MF_01128a237')) AS ?keyword237) . BIND(URI(CONCAT(STR(?this), '#MF_01128a238')) AS ?keyword238) . OPTIONAL { ?this up:annotation ?samtransmembrane883 ; up:sequence ?thisSequence . ?samtransmembrane883 up:range ?samtransmembraner884 ; rdf:type up:Transmembrane_Annotation . ?samtransmembraner884 faldo:begin ?samtransmembraneb885 ; faldo:end ?samtransmembranee886 . ?samtransmembraneb885 faldo:position ?samtransmembranebp887 ; faldo:reference ?thisSequence . ?samtransmembranee886 faldo:position ?samtransmembraneep888 ; faldo:reference ?thisSequence . BIND(?this AS ?sam239) . } BIND(URI(CONCAT(STR(?this), '#MF_01128a245')) AS ?keyword245) . BIND(URI(CONCAT(STR(?this), '#MF_01128a246')) AS ?keyword246) . BIND(URI(CONCAT(STR(?this), '#MF_01128a247')) AS ?keyword247) . }