CONSTRUCT { _:413877 up:source unirule:MF_01182 . _:413878 up:source unirule:MF_01182 . _:413879 up:source unirule:MF_01182 . _:413880 up:source unirule:MF_01182 . _:413881 up:source unirule:MF_01182 . _:413882 up:source unirule:MF_01182 . _:413883 up:source unirule:MF_01182 . _:413884 up:source unirule:MF_01182 . _:413885 up:source unirule:MF_01182 . _:413886 up:source unirule:MF_01182 . _:413887 up:source unirule:MF_01182 . _:413888 up:source unirule:MF_01182 . _:413889 up:source unirule:MF_01182 . _:413890 up:source unirule:MF_01182 . _:413891 up:source unirule:MF_01182 . _:413892 up:source unirule:MF_01182 . _:413893 up:source unirule:MF_01182 . _:413894 up:source unirule:MF_01182 . _:413895 up:source unirule:MF_01182 . _:413896 up:source unirule:MF_01182 . _:413897 up:source unirule:MF_01182 . _:413898 up:source unirule:MF_01182 . _:413899 up:source unirule:MF_01182 . _:413900 up:source unirule:MF_01182 . _:413901 up:source unirule:MF_01182 . _:413902 up:source unirule:MF_01182 . _:413903 up:source unirule:MF_01182 . _:413904 up:source unirule:MF_01182 . _:413905 up:source unirule:MF_01182 . _:413906 up:source unirule:MF_01182 . _:413907 up:source unirule:MF_01182 . _:413908 up:source unirule:MF_01182 . _:413909 up:source unirule:MF_01182 . _:413910 up:source unirule:MF_01182 . _:413911 up:source unirule:MF_01182 . _:413912 up:source unirule:MF_01182 . _:413913 up:source unirule:MF_01182 . _:413914 up:source unirule:MF_01182 . _:413915 up:source unirule:MF_01182 . _:413916 up:source unirule:MF_01182 . _:413917 up:source unirule:MF_01182 . _:413918 up:source unirule:MF_01182 . _:413919 up:source unirule:MF_01182 . _:413920 up:source unirule:MF_01182 . _:413921 up:source unirule:MF_01182 . _:413922 up:source unirule:MF_01182 . _:413923 up:source unirule:MF_01182 . _:413924 up:source unirule:MF_01182 . _:413925 up:source unirule:MF_01182 . ?this up:alternativeName ?name1 ; up:annotation ?annotation3 , ?annotation4 , ?annotation6 , ?annotation7 , ?annotation9 ; up:classifiedWith GO:0042128 , GO:0042279 , GO:0042597 , keyword:249 , keyword:560 , keyword:574 , keyword:732 , keyword:813 ; up:precursor "true"^^xsd:boolean ; up:recommendedName ?name0 . ?name0 up:ecName '1.7.2.2' ; up:fullName 'Cytochrome c-552' ; rdf:type up:Structured_Name . ?name1 up:fullName 'Ammonia-forming cytochrome c nitrite reductase' ; up:shortName 'Cytochrome c nitrite reductase' ; rdf:type up:Structured_Name . ?gene2 skos:prefLabel 'nrfA' . ?annotation3 a up:Function_Annotation ; rdfs:comment 'Catalyzes the reduction of nitrite to ammonia, consuming six electrons in the process.' . ?annotation4 up:activity ?activity5 ; rdf:type up:Catalytic_Activity_Annotation . ?activity5 up:catalyticActivity <http://rdf.rhea-db.org/13089>; up:enzymeClass <http://purl.uniprot.org/enzyme/1.7.2.2>. ?annotation6 a up:Pathway_Annotation ; rdfs:comment 'Nitrogen metabolism; nitrate reduction (assimilation).' . ?annotation7 a up:Subcellular_Location_Annotation . ?annotation7li8 up:cellularComponent <http://purl.uniprot.org/locations/null>. ?annotation9 a up:Similarity_Annotation ; rdfs:comment 'Belongs to the cytochrome c-552 family.' . ?case10 up:classifiedWith GO:0005509 , keyword:106 . ?case11 up:classifiedWith GO:0005506 , keyword:408 , keyword:479 . ?case12 up:classifiedWith keyword:349 . ?pfs13 up:annotation ?annotation14 , ?annotation20 . ?annotation14 faldo:begin ?pfsb15 ; faldo:end ?pfse16 ; up:ligand ?ligand17 ; rdf:type up:Binding_Site_Annotation ; rdfs:comment 'covalent' . ?pfsb15 faldo:position ?thisPositionOn18 ; rdf:type faldo:ExactPosition . ?pfse16 faldo:position ?thisPositionOn19 ; rdf:type faldo:ExactPosition . ?ligand17 rdfs:subClassOf chebi:61717 . ?annotation20 faldo:begin ?pfsb21 ; faldo:end ?pfse22 ; up:ligand ?ligand23 ; rdf:type up:Binding_Site_Annotation ; rdfs:comment 'covalent' . ?pfsb21 faldo:position ?thisPositionOn24 ; rdf:type faldo:ExactPosition . ?pfse22 faldo:position ?thisPositionOn25 ; rdf:type faldo:ExactPosition . ?ligand23 rdfs:subClassOf chebi:61717 . ?pfs26 up:annotation ?annotation27 , ?annotation33 , ?annotation39 , ?annotation45 , ?annotation51 , ?annotation57 , ?annotation63 , ?annotation69 , ?annotation75 . ?annotation27 faldo:begin ?pfsb28 ; faldo:end ?pfse29 ; up:ligand ?ligand30 ; rdf:type up:Binding_Site_Annotation ; rdfs:comment 'axial binding residue' . ?pfsb28 faldo:position ?thisPositionOn31 ; rdf:type faldo:ExactPosition . ?pfse29 faldo:position ?thisPositionOn32 ; rdf:type faldo:ExactPosition . ?ligand30 up:ligandPart ?ligand30 ; rdfs:subClassOf chebi:18248 , chebi:61717 . ?annotation33 faldo:begin ?pfsb34 ; faldo:end ?pfse35 ; up:ligand ?ligand36 ; rdf:type up:Binding_Site_Annotation ; rdfs:comment 'axial binding residue' . ?pfsb34 faldo:position ?thisPositionOn37 ; rdf:type faldo:ExactPosition . ?pfse35 faldo:position ?thisPositionOn38 ; rdf:type faldo:ExactPosition . ?ligand36 up:ligandPart ?ligand36 ; rdfs:subClassOf chebi:18248 , chebi:61717 . ?annotation39 faldo:begin ?pfsb40 ; faldo:end ?pfse41 ; up:ligand ?ligand42 ; rdf:type up:Binding_Site_Annotation ; rdfs:comment 'axial binding residue' . ?pfsb40 faldo:position ?thisPositionOn43 ; rdf:type faldo:ExactPosition . ?pfse41 faldo:position ?thisPositionOn44 ; rdf:type faldo:ExactPosition . ?ligand42 up:ligandPart ?ligand42 ; rdfs:subClassOf chebi:18248 , chebi:61717 . ?annotation45 faldo:begin ?pfsb46 ; faldo:end ?pfse47 ; up:ligand ?ligand48 ; rdf:type up:Binding_Site_Annotation ; rdfs:comment 'axial binding residue' . ?pfsb46 faldo:position ?thisPositionOn49 ; rdf:type faldo:ExactPosition . ?pfse47 faldo:position ?thisPositionOn50 ; rdf:type faldo:ExactPosition . ?ligand48 up:ligandPart ?ligand48 ; rdfs:subClassOf chebi:18248 , chebi:61717 . ?annotation51 faldo:begin ?pfsb52 ; faldo:end ?pfse53 ; up:ligand ?ligand54 ; rdf:type up:Binding_Site_Annotation ; rdfs:comment 'axial binding residue' . ?pfsb52 faldo:position ?thisPositionOn55 ; rdf:type faldo:ExactPosition . ?pfse53 faldo:position ?thisPositionOn56 ; rdf:type faldo:ExactPosition . ?ligand54 up:ligandPart ?ligand54 ; rdfs:subClassOf chebi:18248 , chebi:61717 . ?annotation57 faldo:begin ?pfsb58 ; faldo:end ?pfse59 ; up:ligand ?ligand60 ; rdf:type up:Binding_Site_Annotation ; rdfs:comment 'axial binding residue' . ?pfsb58 faldo:position ?thisPositionOn61 ; rdf:type faldo:ExactPosition . ?pfse59 faldo:position ?thisPositionOn62 ; rdf:type faldo:ExactPosition . ?ligand60 up:ligandPart ?ligand60 ; rdfs:subClassOf chebi:18248 , chebi:61717 . ?annotation63 faldo:begin ?pfsb64 ; faldo:end ?pfse65 ; up:ligand ?ligand66 ; rdf:type up:Binding_Site_Annotation ; rdfs:comment 'axial binding residue' . ?pfsb64 faldo:position ?thisPositionOn67 ; rdf:type faldo:ExactPosition . ?pfse65 faldo:position ?thisPositionOn68 ; rdf:type faldo:ExactPosition . ?ligand66 up:ligandPart ?ligand66 ; rdfs:subClassOf chebi:18248 , chebi:61717 . ?annotation69 faldo:begin ?pfsb70 ; faldo:end ?pfse71 ; up:ligand ?ligand72 ; rdf:type up:Binding_Site_Annotation ; rdfs:comment 'axial binding residue' . ?pfsb70 faldo:position ?thisPositionOn73 ; rdf:type faldo:ExactPosition . ?pfse71 faldo:position ?thisPositionOn74 ; rdf:type faldo:ExactPosition . ?ligand72 up:ligandPart ?ligand72 ; rdfs:subClassOf chebi:18248 , chebi:61717 . ?annotation75 faldo:begin ?pfsb76 ; faldo:end ?pfse77 ; up:ligand ?ligand78 ; rdf:type up:Binding_Site_Annotation ; rdfs:comment 'axial binding residue' . ?pfsb76 faldo:position ?thisPositionOn79 ; rdf:type faldo:ExactPosition . ?pfse77 faldo:position ?thisPositionOn80 ; rdf:type faldo:ExactPosition . ?ligand78 up:ligandPart ?ligand78 ; rdfs:subClassOf chebi:18248 , chebi:61717 . ?pfs81 up:annotation ?annotation82 , ?annotation88 . ?annotation82 faldo:begin ?pfsb83 ; faldo:end ?pfse84 ; up:ligand ?ligand85 ; rdf:type up:Binding_Site_Annotation ; rdfs:comment 'covalent' . ?pfsb83 faldo:position ?thisPositionOn86 ; rdf:type faldo:ExactPosition . ?pfse84 faldo:position ?thisPositionOn87 ; rdf:type faldo:ExactPosition . ?ligand85 rdfs:subClassOf chebi:61717 . ?annotation88 faldo:begin ?pfsb89 ; faldo:end ?pfse90 ; up:ligand ?ligand91 ; rdf:type up:Binding_Site_Annotation ; rdfs:comment 'covalent' . ?pfsb89 faldo:position ?thisPositionOn92 ; rdf:type faldo:ExactPosition . ?pfse90 faldo:position ?thisPositionOn93 ; rdf:type faldo:ExactPosition . ?ligand91 rdfs:subClassOf chebi:61717 . ?pfs94 up:annotation ?annotation95 , ?annotation101 . ?annotation95 faldo:begin ?pfsb96 ; faldo:end ?pfse97 ; up:ligand ?ligand98 ; rdf:type up:Binding_Site_Annotation ; rdfs:comment 'covalent' . ?pfsb96 faldo:position ?thisPositionOn99 ; rdf:type faldo:ExactPosition . ?pfse97 faldo:position ?thisPositionOn100 ; rdf:type faldo:ExactPosition . ?ligand98 rdfs:subClassOf chebi:61717 . ?annotation101 faldo:begin ?pfsb102 ; faldo:end ?pfse103 ; up:ligand ?ligand104 ; rdf:type up:Binding_Site_Annotation ; rdfs:comment 'covalent' . ?pfsb102 faldo:position ?thisPositionOn105 ; rdf:type faldo:ExactPosition . ?pfse103 faldo:position ?thisPositionOn106 ; rdf:type faldo:ExactPosition . ?ligand104 rdfs:subClassOf chebi:61717 . ?pfs107 up:annotation ?annotation108 , ?annotation114 . ?annotation108 faldo:begin ?pfsb109 ; faldo:end ?pfse110 ; up:ligand ?ligand111 ; rdf:type up:Binding_Site_Annotation ; rdfs:comment 'covalent' . ?pfsb109 faldo:position ?thisPositionOn112 ; rdf:type faldo:ExactPosition . ?pfse110 faldo:position ?thisPositionOn113 ; rdf:type faldo:ExactPosition . ?ligand111 rdfs:subClassOf chebi:61717 . ?annotation114 faldo:begin ?pfsb115 ; faldo:end ?pfse116 ; up:ligand ?ligand117 ; rdf:type up:Binding_Site_Annotation ; rdfs:comment 'covalent' . ?pfsb115 faldo:position ?thisPositionOn118 ; rdf:type faldo:ExactPosition . ?pfse116 faldo:position ?thisPositionOn119 ; rdf:type faldo:ExactPosition . ?ligand117 rdfs:subClassOf chebi:61717 . ?pfs120 up:annotation ?annotation121 , ?annotation127 , ?annotation133 , ?annotation139 . ?annotation121 faldo:begin ?pfsb122 ; faldo:end ?pfse123 ; up:ligand ?ligand124 ; rdf:type up:Binding_Site_Annotation . ?pfsb122 faldo:position ?thisPositionOn125 ; rdf:type faldo:ExactPosition . ?pfse123 faldo:position ?thisPositionOn126 ; rdf:type faldo:ExactPosition . ?ligand124 rdfs:subClassOf chebi:29108 . ?annotation127 faldo:begin ?pfsb128 ; faldo:end ?pfse129 ; up:ligand ?ligand130 ; rdf:type up:Binding_Site_Annotation . ?pfsb128 faldo:position ?thisPositionOn131 ; rdf:type faldo:ExactPosition . ?pfse129 faldo:position ?thisPositionOn132 ; rdf:type faldo:ExactPosition . ?ligand130 rdfs:subClassOf chebi:29108 . ?annotation133 faldo:begin ?pfsb134 ; faldo:end ?pfse135 ; up:ligand ?ligand136 ; rdf:type up:Binding_Site_Annotation . ?pfsb134 faldo:position ?thisPositionOn137 ; rdf:type faldo:ExactPosition . ?pfse135 faldo:position ?thisPositionOn138 ; rdf:type faldo:ExactPosition . ?ligand136 rdfs:subClassOf chebi:29108 . ?annotation139 faldo:begin ?pfsb140 ; faldo:end ?pfse141 ; up:ligand ?ligand142 ; rdf:type up:Binding_Site_Annotation . ?pfsb140 faldo:position ?thisPositionOn143 ; rdf:type faldo:ExactPosition . ?pfse141 faldo:position ?thisPositionOn144 ; rdf:type faldo:ExactPosition . ?ligand142 rdfs:subClassOf chebi:29108 . ?pfs145 up:annotation ?annotation146 , ?annotation152 . ?annotation146 faldo:begin ?pfsb147 ; faldo:end ?pfse148 ; up:ligand ?ligand149 ; rdf:type up:Binding_Site_Annotation ; rdfs:comment 'covalent' . ?pfsb147 faldo:position ?thisPositionOn150 ; rdf:type faldo:ExactPosition . ?pfse148 faldo:position ?thisPositionOn151 ; rdf:type faldo:ExactPosition . ?ligand149 rdfs:subClassOf chebi:61717 . ?annotation152 faldo:begin ?pfsb153 ; faldo:end ?pfse154 ; up:ligand ?ligand155 ; rdf:type up:Binding_Site_Annotation ; rdfs:comment 'covalent' . ?pfsb153 faldo:position ?thisPositionOn156 ; rdf:type faldo:ExactPosition . ?pfse154 faldo:position ?thisPositionOn157 ; rdf:type faldo:ExactPosition . ?ligand155 rdfs:subClassOf chebi:61717 . ?pfs158 up:annotation ?annotation159 . ?annotation159 faldo:begin ?pfsb160 ; faldo:end ?pfse161 ; up:ligand ?ligand162 ; rdf:type up:Binding_Site_Annotation . ?pfsb160 faldo:position ?thisPositionOn164 ; rdf:type faldo:ExactPosition . ?pfse161 faldo:position ?thisPositionOn165 ; rdf:type faldo:ExactPosition . ?ligand162 rdfs:subClassOf ?molecule163 . ?molecule163 rdfs:label 'substrate' . ?pfs166 up:annotation ?annotation167 . ?annotation167 faldo:begin ?pfsb168 ; faldo:end ?pfse169 ; up:ligand ?ligand170 ; rdf:type up:Binding_Site_Annotation . ?pfsb168 faldo:position ?thisPositionOn172 ; rdf:type faldo:ExactPosition . ?pfse169 faldo:position ?thisPositionOn173 ; rdf:type faldo:ExactPosition . ?ligand170 rdfs:subClassOf ?molecule171 . ?molecule171 rdfs:label 'substrate' . ?sam174 up:classifiedWith keyword:732 . ?signal175 faldo:begin ?signalb176 ; faldo:end ?signale177 . ?signalb176 faldo:position ?signalbp178 . ?signale177 faldo:position ?signalep179 . ?keyword180 up:range ?signal175 . _:413926 a rdf:Statement ; up:attribution _:413877 ; rdf:subject ?this ; rdf:predicate up:recommendedName ; rdf:object ?name0 . _:413927 a rdf:Statement ; up:attribution _:413878 ; rdf:subject ?this ; rdf:predicate up:alternativeName ; rdf:object ?name1 . _:413928 a rdf:Statement ; up:attribution _:413879 ; rdf:subject ?this ; rdf:predicate up:precursor ; rdf:object "true"^^xsd:boolean . _:413929 a rdf:Statement ; up:attribution _:413880 ; rdf:subject ?gene2 ; rdf:predicate up:encodedBy ; rdf:object ?gene2 . _:413930 a rdf:Statement ; up:attribution _:413881 ; rdf:subject ?this ; rdf:predicate up:annotation ; rdf:object ?annotation3 . _:413931 a rdf:Statement ; up:attribution _:413882 ; rdf:subject ?this ; rdf:predicate up:annotation ; rdf:object ?annotation4 . _:413932 a rdf:Statement ; up:attribution _:413883 ; rdf:subject ?this ; rdf:predicate up:annotation ; rdf:object ?annotation6 . _:413933 a rdf:Statement ; up:attribution _:413884 ; rdf:subject ?this ; rdf:predicate up:annotation ; rdf:object ?annotation7 . _:413934 a rdf:Statement ; up:attribution _:413885 ; rdf:subject ?this ; rdf:predicate up:annotation ; rdf:object ?annotation9 . _:413935 a rdf:Statement ; up:attribution _:413886 ; rdf:subject ?this ; rdf:predicate up:classifiedWith ; rdf:object keyword:249 . _:413936 a rdf:Statement ; up:attribution _:413887 ; rdf:subject ?this ; rdf:predicate up:classifiedWith ; rdf:object keyword:560 . _:413937 a rdf:Statement ; up:attribution _:413888 ; rdf:subject ?this ; rdf:predicate up:classifiedWith ; rdf:object keyword:574 . _:413938 a rdf:Statement ; up:attribution _:413889 ; rdf:subject ?this ; rdf:predicate up:classifiedWith ; rdf:object keyword:732 . _:413939 a rdf:Statement ; up:attribution _:413890 ; rdf:subject ?this ; rdf:predicate up:classifiedWith ; rdf:object keyword:813 . _:413940 a rdf:Statement ; up:attribution _:413891 ; rdf:subject ?this ; rdf:predicate up:classifiedWith ; rdf:object GO:0042279 . _:413941 a rdf:Statement ; up:attribution _:413892 ; rdf:subject ?this ; rdf:predicate up:classifiedWith ; rdf:object GO:0042128 . _:413942 a rdf:Statement ; up:attribution _:413893 ; rdf:subject ?this ; rdf:predicate up:classifiedWith ; rdf:object GO:0042597 . _:413943 a rdf:Statement ; up:attribution _:413894 ; rdf:subject ?case10 ; rdf:predicate up:classifiedWith ; rdf:object keyword:106 . _:413944 a rdf:Statement ; up:attribution _:413895 ; rdf:subject ?case10 ; rdf:predicate up:classifiedWith ; rdf:object GO:0005509 . _:413945 a rdf:Statement ; up:attribution _:413896 ; rdf:subject ?case11 ; rdf:predicate up:classifiedWith ; rdf:object keyword:408 . _:413946 a rdf:Statement ; up:attribution _:413897 ; rdf:subject ?case11 ; rdf:predicate up:classifiedWith ; rdf:object keyword:479 . _:413947 a rdf:Statement ; up:attribution _:413898 ; rdf:subject ?case11 ; rdf:predicate up:classifiedWith ; rdf:object GO:0005506 . _:413948 a rdf:Statement ; up:attribution _:413899 ; rdf:subject ?case12 ; rdf:predicate up:classifiedWith ; rdf:object keyword:349 . _:413949 a rdf:Statement ; up:source unirule:MF_01182 ; rdf:subject ?pfs13 ; rdf:predicate up:annotation ; rdf:object ?annotation14 . _:413950 a rdf:Statement ; up:attribution _:413900 ; rdf:subject ?pfs13 ; rdf:predicate up:annotation ; rdf:object ?annotation14 . _:413951 a rdf:Statement ; up:source unirule:MF_01182 ; rdf:subject ?pfs13 ; rdf:predicate up:annotation ; rdf:object ?annotation20 . _:413952 a rdf:Statement ; up:attribution _:413901 ; rdf:subject ?pfs13 ; rdf:predicate up:annotation ; rdf:object ?annotation20 . _:413953 a rdf:Statement ; up:source unirule:MF_01182 ; rdf:subject ?pfs26 ; rdf:predicate up:annotation ; rdf:object ?annotation27 . _:413954 a rdf:Statement ; up:attribution _:413902 ; rdf:subject ?pfs26 ; rdf:predicate up:annotation ; rdf:object ?annotation27 . _:413955 a rdf:Statement ; up:source unirule:MF_01182 ; rdf:subject ?pfs26 ; rdf:predicate up:annotation ; rdf:object ?annotation33 . _:413956 a rdf:Statement ; up:attribution _:413903 ; rdf:subject ?pfs26 ; rdf:predicate up:annotation ; rdf:object ?annotation33 . _:413957 a rdf:Statement ; up:source unirule:MF_01182 ; rdf:subject ?pfs26 ; rdf:predicate up:annotation ; rdf:object ?annotation39 . _:413958 a rdf:Statement ; up:attribution _:413904 ; rdf:subject ?pfs26 ; rdf:predicate up:annotation ; rdf:object ?annotation39 . _:413959 a rdf:Statement ; up:source unirule:MF_01182 ; rdf:subject ?pfs26 ; rdf:predicate up:annotation ; rdf:object ?annotation45 . _:413960 a rdf:Statement ; up:attribution _:413905 ; rdf:subject ?pfs26 ; rdf:predicate up:annotation ; rdf:object ?annotation45 . _:413961 a rdf:Statement ; up:source unirule:MF_01182 ; rdf:subject ?pfs26 ; rdf:predicate up:annotation ; rdf:object ?annotation51 . _:413962 a rdf:Statement ; up:attribution _:413906 ; rdf:subject ?pfs26 ; rdf:predicate up:annotation ; rdf:object ?annotation51 . _:413963 a rdf:Statement ; up:source unirule:MF_01182 ; rdf:subject ?pfs26 ; rdf:predicate up:annotation ; rdf:object ?annotation57 . _:413964 a rdf:Statement ; up:attribution _:413907 ; rdf:subject ?pfs26 ; rdf:predicate up:annotation ; rdf:object ?annotation57 . _:413965 a rdf:Statement ; up:source unirule:MF_01182 ; rdf:subject ?pfs26 ; rdf:predicate up:annotation ; rdf:object ?annotation63 . _:413966 a rdf:Statement ; up:attribution _:413908 ; rdf:subject ?pfs26 ; rdf:predicate up:annotation ; rdf:object ?annotation63 . _:413967 a rdf:Statement ; up:source unirule:MF_01182 ; rdf:subject ?pfs26 ; rdf:predicate up:annotation ; rdf:object ?annotation69 . _:413968 a rdf:Statement ; up:attribution _:413909 ; rdf:subject ?pfs26 ; rdf:predicate up:annotation ; rdf:object ?annotation69 . _:413969 a rdf:Statement ; up:source unirule:MF_01182 ; rdf:subject ?pfs26 ; rdf:predicate up:annotation ; rdf:object ?annotation75 . _:413970 a rdf:Statement ; up:attribution _:413910 ; rdf:subject ?pfs26 ; rdf:predicate up:annotation ; rdf:object ?annotation75 . _:413971 a rdf:Statement ; up:source unirule:MF_01182 ; rdf:subject ?pfs81 ; rdf:predicate up:annotation ; rdf:object ?annotation82 . _:413972 a rdf:Statement ; up:attribution _:413911 ; rdf:subject ?pfs81 ; rdf:predicate up:annotation ; rdf:object ?annotation82 . _:413973 a rdf:Statement ; up:source unirule:MF_01182 ; rdf:subject ?pfs81 ; rdf:predicate up:annotation ; rdf:object ?annotation88 . _:413974 a rdf:Statement ; up:attribution _:413912 ; rdf:subject ?pfs81 ; rdf:predicate up:annotation ; rdf:object ?annotation88 . _:413975 a rdf:Statement ; up:source unirule:MF_01182 ; rdf:subject ?pfs94 ; rdf:predicate up:annotation ; rdf:object ?annotation95 . _:413976 a rdf:Statement ; up:attribution _:413913 ; rdf:subject ?pfs94 ; rdf:predicate up:annotation ; rdf:object ?annotation95 . _:413977 a rdf:Statement ; up:source unirule:MF_01182 ; rdf:subject ?pfs94 ; rdf:predicate up:annotation ; rdf:object ?annotation101 . _:413978 a rdf:Statement ; up:attribution _:413914 ; rdf:subject ?pfs94 ; rdf:predicate up:annotation ; rdf:object ?annotation101 . _:413979 a rdf:Statement ; up:source unirule:MF_01182 ; rdf:subject ?pfs107 ; rdf:predicate up:annotation ; rdf:object ?annotation108 . _:413980 a rdf:Statement ; up:attribution _:413915 ; rdf:subject ?pfs107 ; rdf:predicate up:annotation ; rdf:object ?annotation108 . _:413981 a rdf:Statement ; up:source unirule:MF_01182 ; rdf:subject ?pfs107 ; rdf:predicate up:annotation ; rdf:object ?annotation114 . _:413982 a rdf:Statement ; up:attribution _:413916 ; rdf:subject ?pfs107 ; rdf:predicate up:annotation ; rdf:object ?annotation114 . _:413983 a rdf:Statement ; up:source unirule:MF_01182 ; rdf:subject ?pfs120 ; rdf:predicate up:annotation ; rdf:object ?annotation121 . _:413984 a rdf:Statement ; up:attribution _:413917 ; rdf:subject ?pfs120 ; rdf:predicate up:annotation ; rdf:object ?annotation121 . _:413985 a rdf:Statement ; up:source unirule:MF_01182 ; rdf:subject ?pfs120 ; rdf:predicate up:annotation ; rdf:object ?annotation127 . _:413986 a rdf:Statement ; up:attribution _:413918 ; rdf:subject ?pfs120 ; rdf:predicate up:annotation ; rdf:object ?annotation127 . _:413987 a rdf:Statement ; up:source unirule:MF_01182 ; rdf:subject ?pfs120 ; rdf:predicate up:annotation ; rdf:object ?annotation133 . _:413988 a rdf:Statement ; up:attribution _:413919 ; rdf:subject ?pfs120 ; rdf:predicate up:annotation ; rdf:object ?annotation133 . _:413989 a rdf:Statement ; up:source unirule:MF_01182 ; rdf:subject ?pfs120 ; rdf:predicate up:annotation ; rdf:object ?annotation139 . _:413990 a rdf:Statement ; up:attribution _:413920 ; rdf:subject ?pfs120 ; rdf:predicate up:annotation ; rdf:object ?annotation139 . _:413991 a rdf:Statement ; up:source unirule:MF_01182 ; rdf:subject ?pfs145 ; rdf:predicate up:annotation ; rdf:object ?annotation146 . _:413992 a rdf:Statement ; up:attribution _:413921 ; rdf:subject ?pfs145 ; rdf:predicate up:annotation ; rdf:object ?annotation146 . _:413993 a rdf:Statement ; up:source unirule:MF_01182 ; rdf:subject ?pfs145 ; rdf:predicate up:annotation ; rdf:object ?annotation152 . _:413994 a rdf:Statement ; up:attribution _:413922 ; rdf:subject ?pfs145 ; rdf:predicate up:annotation ; rdf:object ?annotation152 . _:413995 a rdf:Statement ; up:source unirule:MF_01182 ; rdf:subject ?pfs158 ; rdf:predicate up:annotation ; rdf:object ?annotation159 . _:413996 a rdf:Statement ; up:attribution _:413923 ; rdf:subject ?pfs158 ; rdf:predicate up:annotation ; rdf:object ?annotation159 . _:413997 a rdf:Statement ; up:source unirule:MF_01182 ; rdf:subject ?pfs166 ; rdf:predicate up:annotation ; rdf:object ?annotation167 . _:413998 a rdf:Statement ; up:attribution _:413924 ; rdf:subject ?pfs166 ; rdf:predicate up:annotation ; rdf:object ?annotation167 . _:413999 a rdf:Statement ; up:attribution _:413925 ; rdf:subject ?sam174 ; rdf:predicate up:classifiedWith ; rdf:object keyword:732 . } WHERE { #baseURI: http://purl.uniprot.org/unirule/MF_01182 #Rule MF_01182 Created by:? on:2006-11-24 Modified by:Edouard de Castro on:2024-09-03 VALUES ?supertaxon181 {taxon:976 taxon:1224} ?this up:organism ?thisOrganism ; rdfs:seeAlso signature:MF_01182 . ?thisOrganism rdfs:subClassOf+ ?supertaxon181 . BIND(URI(CONCAT(STR(?this), '#MF_01182a0')) AS ?name0) . BIND(URI(CONCAT(STR(?this), '#MF_01182a1')) AS ?name1) . BIND(URI(CONCAT(STR(?this), '#MF_01182a3')) AS ?annotation3) . BIND(URI(CONCAT(STR(?this), '#MF_01182a4')) AS ?annotation4) . BIND(URI(CONCAT(STR(?this), '#MF_01182a6')) AS ?annotation6) . BIND(URI(CONCAT(STR(?this), '#MF_01182a7')) AS ?annotation7) . BIND(URI(CONCAT(STR(?this), '#MF_01182a9')) AS ?annotation9) . OPTIONAL { ?this up:sequence ?thisSequence . ?thisSequence rdf:value ?thisSequenceValue . ?templateMotifMatch186 faldo:location ?templateMotifSequenceMatchRegionP0ABK9187 ; edam:is_output_of ?templateMotifSequenceProfileAlignmentOperationP0ABK9189 ; rdf:type edam:data_0869 ; rdf:value ?templateMotifCigarP0ABK9MF_01182182 . ?templateMotifSequenceMatchRegionP0ABK9187 faldo:begin ?templateMotifSequenceMatchBeginP0ABK9188 . ?templateMotifSequenceMatchBeginP0ABK9188 faldo:position ?templateMotifSequenceMatchBeginPositionP0ABK9183 ; faldo:reference isoform:P0ABK9-1 . ?templateMotifSequenceProfileAlignmentOperationP0ABK9189 edam:has_input signature:MF_01182 ; rdf:type edam:operation_0300 . ?targetMotifMatch190 faldo:location ?targetMotifMatchRegionMatch191 ; edam:is_output_of ?targetMotifSequenceAlignmentOperationMF_01182193 ; rdf:type edam:data_0869 ; rdf:value ?targetMotifMatchCigarP0ABK9MF_01182184 . ?targetMotifMatchRegionMatch191 faldo:begin ?targetMotifMatchRegionMatchBeginMF_01182192 . ?targetMotifMatchRegionMatchBeginMF_01182192 faldo:position ?targetMotifMatchRegionMatchBeginPositionMF_01182185 ; faldo:reference ?thisSequence . ?targetMotifSequenceAlignmentOperationMF_01182193 edam:has_input signature:MF_01182 ; rdf:type edam:operation_0300 . BIND(?this AS ?tagFTGRP_7) . BIND(STRLEN(REPLACE(SUBSTR(?templateMotifCigarP0ABK9MF_01182182, 1, (STRLEN(?templateMotifCigarP0ABK9MF_01182182) - STRLEN(REPLACE(?templateMotifCigarP0ABK9MF_01182182, CONCAT('^(?:-*[^-]){', STR(((314 - ?templateMotifSequenceMatchBeginPositionP0ABK9183) + 1)), '}'), '')))), '[a-z]', '')) AS ?step1194) . BIND((STRLEN(SUBSTR(?targetMotifMatchCigarP0ABK9MF_01182184, 1, (STRLEN(?targetMotifMatchCigarP0ABK9MF_01182184) - STRLEN(REPLACE(?targetMotifMatchCigarP0ABK9MF_01182184, CONCAT('^(?:[a-z]*(?:[A-Z]|-)){', STR(?step1194), '}'), ''))))) - STRLEN(REPLACE(SUBSTR(?targetMotifMatchCigarP0ABK9MF_01182184, 1, (STRLEN(?targetMotifMatchCigarP0ABK9MF_01182184) - STRLEN(REPLACE(?targetMotifMatchCigarP0ABK9MF_01182184, CONCAT('^(?:[a-z]*(?:[A-Z]|-)){', STR(?step1194), '}'), '')))), '[^-]', ''))) AS ?step2195) . BIND(((?step2195 + ?targetMotifMatchRegionMatchBeginPositionMF_01182185) - 1) AS ?thisPositionOn18) . BIND(?thisPositionOn18 AS ?thisPositionOn19) . BIND(?this AS ?pfs1t196) . BIND(URI(CONCAT(STR(?thisSequence), '#position', STR(?thisPositionOn18))) AS ?pfsb15) . BIND(URI(CONCAT(STR(?thisSequence), '#position', STR(?thisPositionOn19))) AS ?pfse16) . FILTER ((SUBSTR(?thisSequenceValue, ?thisPositionOn18, 1) = 'C')) . BIND(STRLEN(REPLACE(SUBSTR(?templateMotifCigarP0ABK9MF_01182182, 1, (STRLEN(?templateMotifCigarP0ABK9MF_01182182) - STRLEN(REPLACE(?templateMotifCigarP0ABK9MF_01182182, CONCAT('^(?:-*[^-]){', STR(((317 - ?templateMotifSequenceMatchBeginPositionP0ABK9183) + 1)), '}'), '')))), '[a-z]', '')) AS ?step1197) . BIND((STRLEN(SUBSTR(?targetMotifMatchCigarP0ABK9MF_01182184, 1, (STRLEN(?targetMotifMatchCigarP0ABK9MF_01182184) - STRLEN(REPLACE(?targetMotifMatchCigarP0ABK9MF_01182184, CONCAT('^(?:[a-z]*(?:[A-Z]|-)){', STR(?step1197), '}'), ''))))) - STRLEN(REPLACE(SUBSTR(?targetMotifMatchCigarP0ABK9MF_01182184, 1, (STRLEN(?targetMotifMatchCigarP0ABK9MF_01182184) - STRLEN(REPLACE(?targetMotifMatchCigarP0ABK9MF_01182184, CONCAT('^(?:[a-z]*(?:[A-Z]|-)){', STR(?step1197), '}'), '')))), '[^-]', ''))) AS ?step2198) . BIND(((?step2198 + ?targetMotifMatchRegionMatchBeginPositionMF_01182185) - 1) AS ?thisPositionOn24) . BIND(?thisPositionOn24 AS ?thisPositionOn25) . BIND(?this AS ?pfs1t199) . BIND(URI(CONCAT(STR(?thisSequence), '#position', STR(?thisPositionOn24))) AS ?pfsb21) . BIND(URI(CONCAT(STR(?thisSequence), '#position', STR(?thisPositionOn25))) AS ?pfse22) . FILTER ((SUBSTR(?thisSequenceValue, ?thisPositionOn24, 1) = 'C')) . BIND(?this AS ?pfs13) . } OPTIONAL { ?this up:sequence ?thisSequence . ?thisSequence rdf:value ?thisSequenceValue . ?templateMotifMatch204 faldo:location ?templateMotifSequenceMatchRegionP0ABK9205 ; edam:is_output_of ?templateMotifSequenceProfileAlignmentOperationP0ABK9207 ; rdf:type edam:data_0869 ; rdf:value ?templateMotifCigarP0ABK9MF_01182200 . ?templateMotifSequenceMatchRegionP0ABK9205 faldo:begin ?templateMotifSequenceMatchBeginP0ABK9206 . ?templateMotifSequenceMatchBeginP0ABK9206 faldo:position ?templateMotifSequenceMatchBeginPositionP0ABK9201 ; faldo:reference isoform:P0ABK9-1 . ?templateMotifSequenceProfileAlignmentOperationP0ABK9207 edam:has_input signature:MF_01182 ; rdf:type edam:operation_0300 . ?targetMotifMatch208 faldo:location ?targetMotifMatchRegionMatch209 ; edam:is_output_of ?targetMotifSequenceAlignmentOperationMF_01182211 ; rdf:type edam:data_0869 ; rdf:value ?targetMotifMatchCigarP0ABK9MF_01182202 . ?targetMotifMatchRegionMatch209 faldo:begin ?targetMotifMatchRegionMatchBeginMF_01182210 . ?targetMotifMatchRegionMatchBeginMF_01182210 faldo:position ?targetMotifMatchRegionMatchBeginPositionMF_01182203 ; faldo:reference ?thisSequence . ?targetMotifSequenceAlignmentOperationMF_01182211 edam:has_input signature:MF_01182 ; rdf:type edam:operation_0300 . BIND(?this AS ?tagFTGRP_1) . BIND(STRLEN(REPLACE(SUBSTR(?templateMotifCigarP0ABK9MF_01182200, 1, (STRLEN(?templateMotifCigarP0ABK9MF_01182200) - STRLEN(REPLACE(?templateMotifCigarP0ABK9MF_01182200, CONCAT('^(?:-*[^-]){', STR(((94 - ?templateMotifSequenceMatchBeginPositionP0ABK9201) + 1)), '}'), '')))), '[a-z]', '')) AS ?step1212) . BIND((STRLEN(SUBSTR(?targetMotifMatchCigarP0ABK9MF_01182202, 1, (STRLEN(?targetMotifMatchCigarP0ABK9MF_01182202) - STRLEN(REPLACE(?targetMotifMatchCigarP0ABK9MF_01182202, CONCAT('^(?:[a-z]*(?:[A-Z]|-)){', STR(?step1212), '}'), ''))))) - STRLEN(REPLACE(SUBSTR(?targetMotifMatchCigarP0ABK9MF_01182202, 1, (STRLEN(?targetMotifMatchCigarP0ABK9MF_01182202) - STRLEN(REPLACE(?targetMotifMatchCigarP0ABK9MF_01182202, CONCAT('^(?:[a-z]*(?:[A-Z]|-)){', STR(?step1212), '}'), '')))), '[^-]', ''))) AS ?step2213) . BIND(((?step2213 + ?targetMotifMatchRegionMatchBeginPositionMF_01182203) - 1) AS ?thisPositionOn31) . BIND(?thisPositionOn31 AS ?thisPositionOn32) . BIND(?this AS ?pfs2t214) . BIND(URI(CONCAT(STR(?thisSequence), '#position', STR(?thisPositionOn31))) AS ?pfsb28) . BIND(URI(CONCAT(STR(?thisSequence), '#position', STR(?thisPositionOn32))) AS ?pfse29) . FILTER ((SUBSTR(?thisSequenceValue, ?thisPositionOn31, 1) = 'H')) . BIND(STRLEN(REPLACE(SUBSTR(?templateMotifCigarP0ABK9MF_01182200, 1, (STRLEN(?templateMotifCigarP0ABK9MF_01182200) - STRLEN(REPLACE(?templateMotifCigarP0ABK9MF_01182200, CONCAT('^(?:-*[^-]){', STR(((126 - ?templateMotifSequenceMatchBeginPositionP0ABK9201) + 1)), '}'), '')))), '[a-z]', '')) AS ?step1215) . BIND((STRLEN(SUBSTR(?targetMotifMatchCigarP0ABK9MF_01182202, 1, (STRLEN(?targetMotifMatchCigarP0ABK9MF_01182202) - STRLEN(REPLACE(?targetMotifMatchCigarP0ABK9MF_01182202, CONCAT('^(?:[a-z]*(?:[A-Z]|-)){', STR(?step1215), '}'), ''))))) - STRLEN(REPLACE(SUBSTR(?targetMotifMatchCigarP0ABK9MF_01182202, 1, (STRLEN(?targetMotifMatchCigarP0ABK9MF_01182202) - STRLEN(REPLACE(?targetMotifMatchCigarP0ABK9MF_01182202, CONCAT('^(?:[a-z]*(?:[A-Z]|-)){', STR(?step1215), '}'), '')))), '[^-]', ''))) AS ?step2216) . BIND(((?step2216 + ?targetMotifMatchRegionMatchBeginPositionMF_01182203) - 1) AS ?thisPositionOn37) . BIND(?thisPositionOn37 AS ?thisPositionOn38) . BIND(?this AS ?pfs2t217) . BIND(URI(CONCAT(STR(?thisSequence), '#position', STR(?thisPositionOn37))) AS ?pfsb34) . BIND(URI(CONCAT(STR(?thisSequence), '#position', STR(?thisPositionOn38))) AS ?pfse35) . FILTER ((SUBSTR(?thisSequenceValue, ?thisPositionOn37, 1) = 'K')) . BIND(STRLEN(REPLACE(SUBSTR(?templateMotifCigarP0ABK9MF_01182200, 1, (STRLEN(?templateMotifCigarP0ABK9MF_01182200) - STRLEN(REPLACE(?templateMotifCigarP0ABK9MF_01182200, CONCAT('^(?:-*[^-]){', STR(((164 - ?templateMotifSequenceMatchBeginPositionP0ABK9201) + 1)), '}'), '')))), '[a-z]', '')) AS ?step1218) . BIND((STRLEN(SUBSTR(?targetMotifMatchCigarP0ABK9MF_01182202, 1, (STRLEN(?targetMotifMatchCigarP0ABK9MF_01182202) - STRLEN(REPLACE(?targetMotifMatchCigarP0ABK9MF_01182202, CONCAT('^(?:[a-z]*(?:[A-Z]|-)){', STR(?step1218), '}'), ''))))) - STRLEN(REPLACE(SUBSTR(?targetMotifMatchCigarP0ABK9MF_01182202, 1, (STRLEN(?targetMotifMatchCigarP0ABK9MF_01182202) - STRLEN(REPLACE(?targetMotifMatchCigarP0ABK9MF_01182202, CONCAT('^(?:[a-z]*(?:[A-Z]|-)){', STR(?step1218), '}'), '')))), '[^-]', ''))) AS ?step2219) . BIND(((?step2219 + ?targetMotifMatchRegionMatchBeginPositionMF_01182203) - 1) AS ?thisPositionOn43) . BIND(?thisPositionOn43 AS ?thisPositionOn44) . BIND(?this AS ?pfs2t220) . BIND(URI(CONCAT(STR(?thisSequence), '#position', STR(?thisPositionOn43))) AS ?pfsb40) . BIND(URI(CONCAT(STR(?thisSequence), '#position', STR(?thisPositionOn44))) AS ?pfse41) . FILTER ((SUBSTR(?thisSequenceValue, ?thisPositionOn43, 1) = 'H')) . BIND(STRLEN(REPLACE(SUBSTR(?templateMotifCigarP0ABK9MF_01182200, 1, (STRLEN(?templateMotifCigarP0ABK9MF_01182200) - STRLEN(REPLACE(?templateMotifCigarP0ABK9MF_01182200, CONCAT('^(?:-*[^-]){', STR(((213 - ?templateMotifSequenceMatchBeginPositionP0ABK9201) + 1)), '}'), '')))), '[a-z]', '')) AS ?step1221) . BIND((STRLEN(SUBSTR(?targetMotifMatchCigarP0ABK9MF_01182202, 1, (STRLEN(?targetMotifMatchCigarP0ABK9MF_01182202) - STRLEN(REPLACE(?targetMotifMatchCigarP0ABK9MF_01182202, CONCAT('^(?:[a-z]*(?:[A-Z]|-)){', STR(?step1221), '}'), ''))))) - STRLEN(REPLACE(SUBSTR(?targetMotifMatchCigarP0ABK9MF_01182202, 1, (STRLEN(?targetMotifMatchCigarP0ABK9MF_01182202) - STRLEN(REPLACE(?targetMotifMatchCigarP0ABK9MF_01182202, CONCAT('^(?:[a-z]*(?:[A-Z]|-)){', STR(?step1221), '}'), '')))), '[^-]', ''))) AS ?step2222) . BIND(((?step2222 + ?targetMotifMatchRegionMatchBeginPositionMF_01182203) - 1) AS ?thisPositionOn49) . BIND(?thisPositionOn49 AS ?thisPositionOn50) . BIND(?this AS ?pfs2t223) . BIND(URI(CONCAT(STR(?thisSequence), '#position', STR(?thisPositionOn49))) AS ?pfsb46) . BIND(URI(CONCAT(STR(?thisSequence), '#position', STR(?thisPositionOn50))) AS ?pfse47) . FILTER ((SUBSTR(?thisSequenceValue, ?thisPositionOn49, 1) = 'H')) . BIND(STRLEN(REPLACE(SUBSTR(?templateMotifCigarP0ABK9MF_01182200, 1, (STRLEN(?templateMotifCigarP0ABK9MF_01182200) - STRLEN(REPLACE(?templateMotifCigarP0ABK9MF_01182200, CONCAT('^(?:-*[^-]){', STR(((275 - ?templateMotifSequenceMatchBeginPositionP0ABK9201) + 1)), '}'), '')))), '[a-z]', '')) AS ?step1224) . BIND((STRLEN(SUBSTR(?targetMotifMatchCigarP0ABK9MF_01182202, 1, (STRLEN(?targetMotifMatchCigarP0ABK9MF_01182202) - STRLEN(REPLACE(?targetMotifMatchCigarP0ABK9MF_01182202, CONCAT('^(?:[a-z]*(?:[A-Z]|-)){', STR(?step1224), '}'), ''))))) - STRLEN(REPLACE(SUBSTR(?targetMotifMatchCigarP0ABK9MF_01182202, 1, (STRLEN(?targetMotifMatchCigarP0ABK9MF_01182202) - STRLEN(REPLACE(?targetMotifMatchCigarP0ABK9MF_01182202, CONCAT('^(?:[a-z]*(?:[A-Z]|-)){', STR(?step1224), '}'), '')))), '[^-]', ''))) AS ?step2225) . BIND(((?step2225 + ?targetMotifMatchRegionMatchBeginPositionMF_01182203) - 1) AS ?thisPositionOn55) . BIND(?thisPositionOn55 AS ?thisPositionOn56) . BIND(?this AS ?pfs2t226) . BIND(URI(CONCAT(STR(?thisSequence), '#position', STR(?thisPositionOn55))) AS ?pfsb52) . BIND(URI(CONCAT(STR(?thisSequence), '#position', STR(?thisPositionOn56))) AS ?pfse53) . FILTER ((SUBSTR(?thisSequenceValue, ?thisPositionOn55, 1) = 'H')) . BIND(STRLEN(REPLACE(SUBSTR(?templateMotifCigarP0ABK9MF_01182200, 1, (STRLEN(?templateMotifCigarP0ABK9MF_01182200) - STRLEN(REPLACE(?templateMotifCigarP0ABK9MF_01182200, CONCAT('^(?:-*[^-]){', STR(((286 - ?templateMotifSequenceMatchBeginPositionP0ABK9201) + 1)), '}'), '')))), '[a-z]', '')) AS ?step1227) . BIND((STRLEN(SUBSTR(?targetMotifMatchCigarP0ABK9MF_01182202, 1, (STRLEN(?targetMotifMatchCigarP0ABK9MF_01182202) - STRLEN(REPLACE(?targetMotifMatchCigarP0ABK9MF_01182202, CONCAT('^(?:[a-z]*(?:[A-Z]|-)){', STR(?step1227), '}'), ''))))) - STRLEN(REPLACE(SUBSTR(?targetMotifMatchCigarP0ABK9MF_01182202, 1, (STRLEN(?targetMotifMatchCigarP0ABK9MF_01182202) - STRLEN(REPLACE(?targetMotifMatchCigarP0ABK9MF_01182202, CONCAT('^(?:[a-z]*(?:[A-Z]|-)){', STR(?step1227), '}'), '')))), '[^-]', ''))) AS ?step2228) . BIND(((?step2228 + ?targetMotifMatchRegionMatchBeginPositionMF_01182203) - 1) AS ?thisPositionOn61) . BIND(?thisPositionOn61 AS ?thisPositionOn62) . BIND(?this AS ?pfs2t229) . BIND(URI(CONCAT(STR(?thisSequence), '#position', STR(?thisPositionOn61))) AS ?pfsb58) . BIND(URI(CONCAT(STR(?thisSequence), '#position', STR(?thisPositionOn62))) AS ?pfse59) . FILTER ((SUBSTR(?thisSequenceValue, ?thisPositionOn61, 1) = 'H')) . BIND(STRLEN(REPLACE(SUBSTR(?templateMotifCigarP0ABK9MF_01182200, 1, (STRLEN(?templateMotifCigarP0ABK9MF_01182200) - STRLEN(REPLACE(?templateMotifCigarP0ABK9MF_01182200, CONCAT('^(?:-*[^-]){', STR(((301 - ?templateMotifSequenceMatchBeginPositionP0ABK9201) + 1)), '}'), '')))), '[a-z]', '')) AS ?step1230) . BIND((STRLEN(SUBSTR(?targetMotifMatchCigarP0ABK9MF_01182202, 1, (STRLEN(?targetMotifMatchCigarP0ABK9MF_01182202) - STRLEN(REPLACE(?targetMotifMatchCigarP0ABK9MF_01182202, CONCAT('^(?:[a-z]*(?:[A-Z]|-)){', STR(?step1230), '}'), ''))))) - STRLEN(REPLACE(SUBSTR(?targetMotifMatchCigarP0ABK9MF_01182202, 1, (STRLEN(?targetMotifMatchCigarP0ABK9MF_01182202) - STRLEN(REPLACE(?targetMotifMatchCigarP0ABK9MF_01182202, CONCAT('^(?:[a-z]*(?:[A-Z]|-)){', STR(?step1230), '}'), '')))), '[^-]', ''))) AS ?step2231) . BIND(((?step2231 + ?targetMotifMatchRegionMatchBeginPositionMF_01182203) - 1) AS ?thisPositionOn67) . BIND(?thisPositionOn67 AS ?thisPositionOn68) . BIND(?this AS ?pfs2t232) . BIND(URI(CONCAT(STR(?thisSequence), '#position', STR(?thisPositionOn67))) AS ?pfsb64) . BIND(URI(CONCAT(STR(?thisSequence), '#position', STR(?thisPositionOn68))) AS ?pfse65) . FILTER ((SUBSTR(?thisSequenceValue, ?thisPositionOn67, 1) = 'H')) . BIND(STRLEN(REPLACE(SUBSTR(?templateMotifCigarP0ABK9MF_01182200, 1, (STRLEN(?templateMotifCigarP0ABK9MF_01182200) - STRLEN(REPLACE(?templateMotifCigarP0ABK9MF_01182200, CONCAT('^(?:-*[^-]){', STR(((318 - ?templateMotifSequenceMatchBeginPositionP0ABK9201) + 1)), '}'), '')))), '[a-z]', '')) AS ?step1233) . BIND((STRLEN(SUBSTR(?targetMotifMatchCigarP0ABK9MF_01182202, 1, (STRLEN(?targetMotifMatchCigarP0ABK9MF_01182202) - STRLEN(REPLACE(?targetMotifMatchCigarP0ABK9MF_01182202, CONCAT('^(?:[a-z]*(?:[A-Z]|-)){', STR(?step1233), '}'), ''))))) - STRLEN(REPLACE(SUBSTR(?targetMotifMatchCigarP0ABK9MF_01182202, 1, (STRLEN(?targetMotifMatchCigarP0ABK9MF_01182202) - STRLEN(REPLACE(?targetMotifMatchCigarP0ABK9MF_01182202, CONCAT('^(?:[a-z]*(?:[A-Z]|-)){', STR(?step1233), '}'), '')))), '[^-]', ''))) AS ?step2234) . BIND(((?step2234 + ?targetMotifMatchRegionMatchBeginPositionMF_01182203) - 1) AS ?thisPositionOn73) . BIND(?thisPositionOn73 AS ?thisPositionOn74) . BIND(?this AS ?pfs2t235) . BIND(URI(CONCAT(STR(?thisSequence), '#position', STR(?thisPositionOn73))) AS ?pfsb70) . BIND(URI(CONCAT(STR(?thisSequence), '#position', STR(?thisPositionOn74))) AS ?pfse71) . FILTER ((SUBSTR(?thisSequenceValue, ?thisPositionOn73, 1) = 'H')) . BIND(STRLEN(REPLACE(SUBSTR(?templateMotifCigarP0ABK9MF_01182200, 1, (STRLEN(?templateMotifCigarP0ABK9MF_01182200) - STRLEN(REPLACE(?templateMotifCigarP0ABK9MF_01182200, CONCAT('^(?:-*[^-]){', STR(((393 - ?templateMotifSequenceMatchBeginPositionP0ABK9201) + 1)), '}'), '')))), '[a-z]', '')) AS ?step1236) . BIND((STRLEN(SUBSTR(?targetMotifMatchCigarP0ABK9MF_01182202, 1, (STRLEN(?targetMotifMatchCigarP0ABK9MF_01182202) - STRLEN(REPLACE(?targetMotifMatchCigarP0ABK9MF_01182202, CONCAT('^(?:[a-z]*(?:[A-Z]|-)){', STR(?step1236), '}'), ''))))) - STRLEN(REPLACE(SUBSTR(?targetMotifMatchCigarP0ABK9MF_01182202, 1, (STRLEN(?targetMotifMatchCigarP0ABK9MF_01182202) - STRLEN(REPLACE(?targetMotifMatchCigarP0ABK9MF_01182202, CONCAT('^(?:[a-z]*(?:[A-Z]|-)){', STR(?step1236), '}'), '')))), '[^-]', ''))) AS ?step2237) . BIND(((?step2237 + ?targetMotifMatchRegionMatchBeginPositionMF_01182203) - 1) AS ?thisPositionOn79) . BIND(?thisPositionOn79 AS ?thisPositionOn80) . BIND(?this AS ?pfs2t238) . BIND(URI(CONCAT(STR(?thisSequence), '#position', STR(?thisPositionOn79))) AS ?pfsb76) . BIND(URI(CONCAT(STR(?thisSequence), '#position', STR(?thisPositionOn80))) AS ?pfse77) . FILTER ((SUBSTR(?thisSequenceValue, ?thisPositionOn79, 1) = 'H')) . BIND(?this AS ?pfs26) . } OPTIONAL { ?this up:sequence ?thisSequence . ?thisSequence rdf:value ?thisSequenceValue . ?templateMotifMatch243 faldo:location ?templateMotifSequenceMatchRegionP0ABK9244 ; edam:is_output_of ?templateMotifSequenceProfileAlignmentOperationP0ABK9246 ; rdf:type edam:data_0869 ; rdf:value ?templateMotifCigarP0ABK9MF_01182239 . ?templateMotifSequenceMatchRegionP0ABK9244 faldo:begin ?templateMotifSequenceMatchBeginP0ABK9245 . ?templateMotifSequenceMatchBeginP0ABK9245 faldo:position ?templateMotifSequenceMatchBeginPositionP0ABK9240 ; faldo:reference isoform:P0ABK9-1 . ?templateMotifSequenceProfileAlignmentOperationP0ABK9246 edam:has_input signature:MF_01182 ; rdf:type edam:operation_0300 . ?targetMotifMatch247 faldo:location ?targetMotifMatchRegionMatch248 ; edam:is_output_of ?targetMotifSequenceAlignmentOperationMF_01182250 ; rdf:type edam:data_0869 ; rdf:value ?targetMotifMatchCigarP0ABK9MF_01182241 . ?targetMotifMatchRegionMatch248 faldo:begin ?targetMotifMatchRegionMatchBeginMF_01182249 . ?targetMotifMatchRegionMatchBeginMF_01182249 faldo:position ?targetMotifMatchRegionMatchBeginPositionMF_01182242 ; faldo:reference ?thisSequence . ?targetMotifSequenceAlignmentOperationMF_01182250 edam:has_input signature:MF_01182 ; rdf:type edam:operation_0300 . BIND(?this AS ?tagFTGRP_5) . BIND(STRLEN(REPLACE(SUBSTR(?templateMotifCigarP0ABK9MF_01182239, 1, (STRLEN(?templateMotifCigarP0ABK9MF_01182239) - STRLEN(REPLACE(?templateMotifCigarP0ABK9MF_01182239, CONCAT('^(?:-*[^-]){', STR(((209 - ?templateMotifSequenceMatchBeginPositionP0ABK9240) + 1)), '}'), '')))), '[a-z]', '')) AS ?step1251) . BIND((STRLEN(SUBSTR(?targetMotifMatchCigarP0ABK9MF_01182241, 1, (STRLEN(?targetMotifMatchCigarP0ABK9MF_01182241) - STRLEN(REPLACE(?targetMotifMatchCigarP0ABK9MF_01182241, CONCAT('^(?:[a-z]*(?:[A-Z]|-)){', STR(?step1251), '}'), ''))))) - STRLEN(REPLACE(SUBSTR(?targetMotifMatchCigarP0ABK9MF_01182241, 1, (STRLEN(?targetMotifMatchCigarP0ABK9MF_01182241) - STRLEN(REPLACE(?targetMotifMatchCigarP0ABK9MF_01182241, CONCAT('^(?:[a-z]*(?:[A-Z]|-)){', STR(?step1251), '}'), '')))), '[^-]', ''))) AS ?step2252) . BIND(((?step2252 + ?targetMotifMatchRegionMatchBeginPositionMF_01182242) - 1) AS ?thisPositionOn86) . BIND(?thisPositionOn86 AS ?thisPositionOn87) . BIND(?this AS ?pfs3t253) . BIND(URI(CONCAT(STR(?thisSequence), '#position', STR(?thisPositionOn86))) AS ?pfsb83) . BIND(URI(CONCAT(STR(?thisSequence), '#position', STR(?thisPositionOn87))) AS ?pfse84) . FILTER ((SUBSTR(?thisSequenceValue, ?thisPositionOn86, 1) = 'C')) . BIND(STRLEN(REPLACE(SUBSTR(?templateMotifCigarP0ABK9MF_01182239, 1, (STRLEN(?templateMotifCigarP0ABK9MF_01182239) - STRLEN(REPLACE(?templateMotifCigarP0ABK9MF_01182239, CONCAT('^(?:-*[^-]){', STR(((212 - ?templateMotifSequenceMatchBeginPositionP0ABK9240) + 1)), '}'), '')))), '[a-z]', '')) AS ?step1254) . BIND((STRLEN(SUBSTR(?targetMotifMatchCigarP0ABK9MF_01182241, 1, (STRLEN(?targetMotifMatchCigarP0ABK9MF_01182241) - STRLEN(REPLACE(?targetMotifMatchCigarP0ABK9MF_01182241, CONCAT('^(?:[a-z]*(?:[A-Z]|-)){', STR(?step1254), '}'), ''))))) - STRLEN(REPLACE(SUBSTR(?targetMotifMatchCigarP0ABK9MF_01182241, 1, (STRLEN(?targetMotifMatchCigarP0ABK9MF_01182241) - STRLEN(REPLACE(?targetMotifMatchCigarP0ABK9MF_01182241, CONCAT('^(?:[a-z]*(?:[A-Z]|-)){', STR(?step1254), '}'), '')))), '[^-]', ''))) AS ?step2255) . BIND(((?step2255 + ?targetMotifMatchRegionMatchBeginPositionMF_01182242) - 1) AS ?thisPositionOn92) . BIND(?thisPositionOn92 AS ?thisPositionOn93) . BIND(?this AS ?pfs3t256) . BIND(URI(CONCAT(STR(?thisSequence), '#position', STR(?thisPositionOn92))) AS ?pfsb89) . BIND(URI(CONCAT(STR(?thisSequence), '#position', STR(?thisPositionOn93))) AS ?pfse90) . FILTER ((SUBSTR(?thisSequenceValue, ?thisPositionOn92, 1) = 'C')) . BIND(?this AS ?pfs81) . } OPTIONAL { ?this up:sequence ?thisSequence . ?thisSequence rdf:value ?thisSequenceValue . ?templateMotifMatch261 faldo:location ?templateMotifSequenceMatchRegionP0ABK9262 ; edam:is_output_of ?templateMotifSequenceProfileAlignmentOperationP0ABK9264 ; rdf:type edam:data_0869 ; rdf:value ?templateMotifCigarP0ABK9MF_01182257 . ?templateMotifSequenceMatchRegionP0ABK9262 faldo:begin ?templateMotifSequenceMatchBeginP0ABK9263 . ?templateMotifSequenceMatchBeginP0ABK9263 faldo:position ?templateMotifSequenceMatchBeginPositionP0ABK9258 ; faldo:reference isoform:P0ABK9-1 . ?templateMotifSequenceProfileAlignmentOperationP0ABK9264 edam:has_input signature:MF_01182 ; rdf:type edam:operation_0300 . ?targetMotifMatch265 faldo:location ?targetMotifMatchRegionMatch266 ; edam:is_output_of ?targetMotifSequenceAlignmentOperationMF_01182268 ; rdf:type edam:data_0869 ; rdf:value ?targetMotifMatchCigarP0ABK9MF_01182259 . ?targetMotifMatchRegionMatch266 faldo:begin ?targetMotifMatchRegionMatchBeginMF_01182267 . ?targetMotifMatchRegionMatchBeginMF_01182267 faldo:position ?targetMotifMatchRegionMatchBeginPositionMF_01182260 ; faldo:reference ?thisSequence . ?targetMotifSequenceAlignmentOperationMF_01182268 edam:has_input signature:MF_01182 ; rdf:type edam:operation_0300 . BIND(?this AS ?tagFTGRP_3) . BIND(STRLEN(REPLACE(SUBSTR(?templateMotifCigarP0ABK9MF_01182257, 1, (STRLEN(?templateMotifCigarP0ABK9MF_01182257) - STRLEN(REPLACE(?templateMotifCigarP0ABK9MF_01182257, CONCAT('^(?:-*[^-]){', STR(((122 - ?templateMotifSequenceMatchBeginPositionP0ABK9258) + 1)), '}'), '')))), '[a-z]', '')) AS ?step1269) . BIND((STRLEN(SUBSTR(?targetMotifMatchCigarP0ABK9MF_01182259, 1, (STRLEN(?targetMotifMatchCigarP0ABK9MF_01182259) - STRLEN(REPLACE(?targetMotifMatchCigarP0ABK9MF_01182259, CONCAT('^(?:[a-z]*(?:[A-Z]|-)){', STR(?step1269), '}'), ''))))) - STRLEN(REPLACE(SUBSTR(?targetMotifMatchCigarP0ABK9MF_01182259, 1, (STRLEN(?targetMotifMatchCigarP0ABK9MF_01182259) - STRLEN(REPLACE(?targetMotifMatchCigarP0ABK9MF_01182259, CONCAT('^(?:[a-z]*(?:[A-Z]|-)){', STR(?step1269), '}'), '')))), '[^-]', ''))) AS ?step2270) . BIND(((?step2270 + ?targetMotifMatchRegionMatchBeginPositionMF_01182260) - 1) AS ?thisPositionOn99) . BIND(?thisPositionOn99 AS ?thisPositionOn100) . BIND(?this AS ?pfs4t271) . BIND(URI(CONCAT(STR(?thisSequence), '#position', STR(?thisPositionOn99))) AS ?pfsb96) . BIND(URI(CONCAT(STR(?thisSequence), '#position', STR(?thisPositionOn100))) AS ?pfse97) . FILTER ((SUBSTR(?thisSequenceValue, ?thisPositionOn99, 1) = 'C')) . BIND(STRLEN(REPLACE(SUBSTR(?templateMotifCigarP0ABK9MF_01182257, 1, (STRLEN(?templateMotifCigarP0ABK9MF_01182257) - STRLEN(REPLACE(?templateMotifCigarP0ABK9MF_01182257, CONCAT('^(?:-*[^-]){', STR(((125 - ?templateMotifSequenceMatchBeginPositionP0ABK9258) + 1)), '}'), '')))), '[a-z]', '')) AS ?step1272) . BIND((STRLEN(SUBSTR(?targetMotifMatchCigarP0ABK9MF_01182259, 1, (STRLEN(?targetMotifMatchCigarP0ABK9MF_01182259) - STRLEN(REPLACE(?targetMotifMatchCigarP0ABK9MF_01182259, CONCAT('^(?:[a-z]*(?:[A-Z]|-)){', STR(?step1272), '}'), ''))))) - STRLEN(REPLACE(SUBSTR(?targetMotifMatchCigarP0ABK9MF_01182259, 1, (STRLEN(?targetMotifMatchCigarP0ABK9MF_01182259) - STRLEN(REPLACE(?targetMotifMatchCigarP0ABK9MF_01182259, CONCAT('^(?:[a-z]*(?:[A-Z]|-)){', STR(?step1272), '}'), '')))), '[^-]', ''))) AS ?step2273) . BIND(((?step2273 + ?targetMotifMatchRegionMatchBeginPositionMF_01182260) - 1) AS ?thisPositionOn105) . BIND(?thisPositionOn105 AS ?thisPositionOn106) . BIND(?this AS ?pfs4t274) . BIND(URI(CONCAT(STR(?thisSequence), '#position', STR(?thisPositionOn105))) AS ?pfsb102) . BIND(URI(CONCAT(STR(?thisSequence), '#position', STR(?thisPositionOn106))) AS ?pfse103) . FILTER ((SUBSTR(?thisSequenceValue, ?thisPositionOn105, 1) = 'C')) . BIND(?this AS ?pfs94) . } OPTIONAL { ?this up:sequence ?thisSequence . ?thisSequence rdf:value ?thisSequenceValue . ?templateMotifMatch279 faldo:location ?templateMotifSequenceMatchRegionP0ABK9280 ; edam:is_output_of ?templateMotifSequenceProfileAlignmentOperationP0ABK9282 ; rdf:type edam:data_0869 ; rdf:value ?templateMotifCigarP0ABK9MF_01182275 . ?templateMotifSequenceMatchRegionP0ABK9280 faldo:begin ?templateMotifSequenceMatchBeginP0ABK9281 . ?templateMotifSequenceMatchBeginP0ABK9281 faldo:position ?templateMotifSequenceMatchBeginPositionP0ABK9276 ; faldo:reference isoform:P0ABK9-1 . ?templateMotifSequenceProfileAlignmentOperationP0ABK9282 edam:has_input signature:MF_01182 ; rdf:type edam:operation_0300 . ?targetMotifMatch283 faldo:location ?targetMotifMatchRegionMatch284 ; edam:is_output_of ?targetMotifSequenceAlignmentOperationMF_01182286 ; rdf:type edam:data_0869 ; rdf:value ?targetMotifMatchCigarP0ABK9MF_01182277 . ?targetMotifMatchRegionMatch284 faldo:begin ?targetMotifMatchRegionMatchBeginMF_01182285 . ?targetMotifMatchRegionMatchBeginMF_01182285 faldo:position ?targetMotifMatchRegionMatchBeginPositionMF_01182278 ; faldo:reference ?thisSequence . ?targetMotifSequenceAlignmentOperationMF_01182286 edam:has_input signature:MF_01182 ; rdf:type edam:operation_0300 . BIND(?this AS ?tagFTGRP_4) . BIND(STRLEN(REPLACE(SUBSTR(?templateMotifCigarP0ABK9MF_01182275, 1, (STRLEN(?templateMotifCigarP0ABK9MF_01182275) - STRLEN(REPLACE(?templateMotifCigarP0ABK9MF_01182275, CONCAT('^(?:-*[^-]){', STR(((160 - ?templateMotifSequenceMatchBeginPositionP0ABK9276) + 1)), '}'), '')))), '[a-z]', '')) AS ?step1287) . BIND((STRLEN(SUBSTR(?targetMotifMatchCigarP0ABK9MF_01182277, 1, (STRLEN(?targetMotifMatchCigarP0ABK9MF_01182277) - STRLEN(REPLACE(?targetMotifMatchCigarP0ABK9MF_01182277, CONCAT('^(?:[a-z]*(?:[A-Z]|-)){', STR(?step1287), '}'), ''))))) - STRLEN(REPLACE(SUBSTR(?targetMotifMatchCigarP0ABK9MF_01182277, 1, (STRLEN(?targetMotifMatchCigarP0ABK9MF_01182277) - STRLEN(REPLACE(?targetMotifMatchCigarP0ABK9MF_01182277, CONCAT('^(?:[a-z]*(?:[A-Z]|-)){', STR(?step1287), '}'), '')))), '[^-]', ''))) AS ?step2288) . BIND(((?step2288 + ?targetMotifMatchRegionMatchBeginPositionMF_01182278) - 1) AS ?thisPositionOn112) . BIND(?thisPositionOn112 AS ?thisPositionOn113) . BIND(?this AS ?pfs5t289) . BIND(URI(CONCAT(STR(?thisSequence), '#position', STR(?thisPositionOn112))) AS ?pfsb109) . BIND(URI(CONCAT(STR(?thisSequence), '#position', STR(?thisPositionOn113))) AS ?pfse110) . FILTER ((SUBSTR(?thisSequenceValue, ?thisPositionOn112, 1) = 'C')) . BIND(STRLEN(REPLACE(SUBSTR(?templateMotifCigarP0ABK9MF_01182275, 1, (STRLEN(?templateMotifCigarP0ABK9MF_01182275) - STRLEN(REPLACE(?templateMotifCigarP0ABK9MF_01182275, CONCAT('^(?:-*[^-]){', STR(((163 - ?templateMotifSequenceMatchBeginPositionP0ABK9276) + 1)), '}'), '')))), '[a-z]', '')) AS ?step1290) . BIND((STRLEN(SUBSTR(?targetMotifMatchCigarP0ABK9MF_01182277, 1, (STRLEN(?targetMotifMatchCigarP0ABK9MF_01182277) - STRLEN(REPLACE(?targetMotifMatchCigarP0ABK9MF_01182277, CONCAT('^(?:[a-z]*(?:[A-Z]|-)){', STR(?step1290), '}'), ''))))) - STRLEN(REPLACE(SUBSTR(?targetMotifMatchCigarP0ABK9MF_01182277, 1, (STRLEN(?targetMotifMatchCigarP0ABK9MF_01182277) - STRLEN(REPLACE(?targetMotifMatchCigarP0ABK9MF_01182277, CONCAT('^(?:[a-z]*(?:[A-Z]|-)){', STR(?step1290), '}'), '')))), '[^-]', ''))) AS ?step2291) . BIND(((?step2291 + ?targetMotifMatchRegionMatchBeginPositionMF_01182278) - 1) AS ?thisPositionOn118) . BIND(?thisPositionOn118 AS ?thisPositionOn119) . BIND(?this AS ?pfs5t292) . BIND(URI(CONCAT(STR(?thisSequence), '#position', STR(?thisPositionOn118))) AS ?pfsb115) . BIND(URI(CONCAT(STR(?thisSequence), '#position', STR(?thisPositionOn119))) AS ?pfse116) . FILTER ((SUBSTR(?thisSequenceValue, ?thisPositionOn118, 1) = 'C')) . BIND(?this AS ?pfs107) . } OPTIONAL { ?this up:sequence ?thisSequence . ?thisSequence rdf:value ?thisSequenceValue . ?templateMotifMatch297 faldo:location ?templateMotifSequenceMatchRegionP0ABK9298 ; edam:is_output_of ?templateMotifSequenceProfileAlignmentOperationP0ABK9300 ; rdf:type edam:data_0869 ; rdf:value ?templateMotifCigarP0ABK9MF_01182293 . ?templateMotifSequenceMatchRegionP0ABK9298 faldo:begin ?templateMotifSequenceMatchBeginP0ABK9299 . ?templateMotifSequenceMatchBeginP0ABK9299 faldo:position ?templateMotifSequenceMatchBeginPositionP0ABK9294 ; faldo:reference isoform:P0ABK9-1 . ?templateMotifSequenceProfileAlignmentOperationP0ABK9300 edam:has_input signature:MF_01182 ; rdf:type edam:operation_0300 . ?targetMotifMatch301 faldo:location ?targetMotifMatchRegionMatch302 ; edam:is_output_of ?targetMotifSequenceAlignmentOperationMF_01182304 ; rdf:type edam:data_0869 ; rdf:value ?targetMotifMatchCigarP0ABK9MF_01182295 . ?targetMotifMatchRegionMatch302 faldo:begin ?targetMotifMatchRegionMatchBeginMF_01182303 . ?targetMotifMatchRegionMatchBeginMF_01182303 faldo:position ?targetMotifMatchRegionMatchBeginPositionMF_01182296 ; faldo:reference ?thisSequence . ?targetMotifSequenceAlignmentOperationMF_01182304 edam:has_input signature:MF_01182 ; rdf:type edam:operation_0300 . BIND(?this AS ?tagFTGRP_2) . BIND(STRLEN(REPLACE(SUBSTR(?templateMotifCigarP0ABK9MF_01182293, 1, (STRLEN(?templateMotifCigarP0ABK9MF_01182293) - STRLEN(REPLACE(?templateMotifCigarP0ABK9MF_01182293, CONCAT('^(?:-*[^-]){', STR(((215 - ?templateMotifSequenceMatchBeginPositionP0ABK9294) + 1)), '}'), '')))), '[a-z]', '')) AS ?step1305) . BIND((STRLEN(SUBSTR(?targetMotifMatchCigarP0ABK9MF_01182295, 1, (STRLEN(?targetMotifMatchCigarP0ABK9MF_01182295) - STRLEN(REPLACE(?targetMotifMatchCigarP0ABK9MF_01182295, CONCAT('^(?:[a-z]*(?:[A-Z]|-)){', STR(?step1305), '}'), ''))))) - STRLEN(REPLACE(SUBSTR(?targetMotifMatchCigarP0ABK9MF_01182295, 1, (STRLEN(?targetMotifMatchCigarP0ABK9MF_01182295) - STRLEN(REPLACE(?targetMotifMatchCigarP0ABK9MF_01182295, CONCAT('^(?:[a-z]*(?:[A-Z]|-)){', STR(?step1305), '}'), '')))), '[^-]', ''))) AS ?step2306) . BIND(((?step2306 + ?targetMotifMatchRegionMatchBeginPositionMF_01182296) - 1) AS ?thisPositionOn125) . BIND(?thisPositionOn125 AS ?thisPositionOn126) . BIND(?this AS ?pfs6t307) . BIND(URI(CONCAT(STR(?thisSequence), '#position', STR(?thisPositionOn125))) AS ?pfsb122) . BIND(URI(CONCAT(STR(?thisSequence), '#position', STR(?thisPositionOn126))) AS ?pfse123) . FILTER ((SUBSTR(?thisSequenceValue, ?thisPositionOn125, 1) = 'E')) . BIND(STRLEN(REPLACE(SUBSTR(?templateMotifCigarP0ABK9MF_01182293, 1, (STRLEN(?templateMotifCigarP0ABK9MF_01182293) - STRLEN(REPLACE(?templateMotifCigarP0ABK9MF_01182293, CONCAT('^(?:-*[^-]){', STR(((216 - ?templateMotifSequenceMatchBeginPositionP0ABK9294) + 1)), '}'), '')))), '[a-z]', '')) AS ?step1308) . BIND((STRLEN(SUBSTR(?targetMotifMatchCigarP0ABK9MF_01182295, 1, (STRLEN(?targetMotifMatchCigarP0ABK9MF_01182295) - STRLEN(REPLACE(?targetMotifMatchCigarP0ABK9MF_01182295, CONCAT('^(?:[a-z]*(?:[A-Z]|-)){', STR(?step1308), '}'), ''))))) - STRLEN(REPLACE(SUBSTR(?targetMotifMatchCigarP0ABK9MF_01182295, 1, (STRLEN(?targetMotifMatchCigarP0ABK9MF_01182295) - STRLEN(REPLACE(?targetMotifMatchCigarP0ABK9MF_01182295, CONCAT('^(?:[a-z]*(?:[A-Z]|-)){', STR(?step1308), '}'), '')))), '[^-]', ''))) AS ?step2309) . BIND(((?step2309 + ?targetMotifMatchRegionMatchBeginPositionMF_01182296) - 1) AS ?thisPositionOn131) . BIND(?thisPositionOn131 AS ?thisPositionOn132) . BIND(?this AS ?pfs6t310) . BIND(URI(CONCAT(STR(?thisSequence), '#position', STR(?thisPositionOn131))) AS ?pfsb128) . BIND(URI(CONCAT(STR(?thisSequence), '#position', STR(?thisPositionOn132))) AS ?pfse129) . FILTER ((SUBSTR(?thisSequenceValue, ?thisPositionOn131, 1) = 'Y')) . BIND(STRLEN(REPLACE(SUBSTR(?templateMotifCigarP0ABK9MF_01182293, 1, (STRLEN(?templateMotifCigarP0ABK9MF_01182293) - STRLEN(REPLACE(?templateMotifCigarP0ABK9MF_01182293, CONCAT('^(?:-*[^-]){', STR(((261 - ?templateMotifSequenceMatchBeginPositionP0ABK9294) + 1)), '}'), '')))), '[a-z]', '')) AS ?step1311) . BIND((STRLEN(SUBSTR(?targetMotifMatchCigarP0ABK9MF_01182295, 1, (STRLEN(?targetMotifMatchCigarP0ABK9MF_01182295) - STRLEN(REPLACE(?targetMotifMatchCigarP0ABK9MF_01182295, CONCAT('^(?:[a-z]*(?:[A-Z]|-)){', STR(?step1311), '}'), ''))))) - STRLEN(REPLACE(SUBSTR(?targetMotifMatchCigarP0ABK9MF_01182295, 1, (STRLEN(?targetMotifMatchCigarP0ABK9MF_01182295) - STRLEN(REPLACE(?targetMotifMatchCigarP0ABK9MF_01182295, CONCAT('^(?:[a-z]*(?:[A-Z]|-)){', STR(?step1311), '}'), '')))), '[^-]', ''))) AS ?step2312) . BIND(((?step2312 + ?targetMotifMatchRegionMatchBeginPositionMF_01182296) - 1) AS ?thisPositionOn137) . BIND(?thisPositionOn137 AS ?thisPositionOn138) . BIND(?this AS ?pfs6t313) . BIND(URI(CONCAT(STR(?thisSequence), '#position', STR(?thisPositionOn137))) AS ?pfsb134) . BIND(URI(CONCAT(STR(?thisSequence), '#position', STR(?thisPositionOn138))) AS ?pfse135) . FILTER ((SUBSTR(?thisSequenceValue, ?thisPositionOn137, 1) = 'K')) . BIND(STRLEN(REPLACE(SUBSTR(?templateMotifCigarP0ABK9MF_01182293, 1, (STRLEN(?templateMotifCigarP0ABK9MF_01182293) - STRLEN(REPLACE(?templateMotifCigarP0ABK9MF_01182293, CONCAT('^(?:-*[^-]){', STR(((263 - ?templateMotifSequenceMatchBeginPositionP0ABK9294) + 1)), '}'), '')))), '[a-z]', '')) AS ?step1314) . BIND((STRLEN(SUBSTR(?targetMotifMatchCigarP0ABK9MF_01182295, 1, (STRLEN(?targetMotifMatchCigarP0ABK9MF_01182295) - STRLEN(REPLACE(?targetMotifMatchCigarP0ABK9MF_01182295, CONCAT('^(?:[a-z]*(?:[A-Z]|-)){', STR(?step1314), '}'), ''))))) - STRLEN(REPLACE(SUBSTR(?targetMotifMatchCigarP0ABK9MF_01182295, 1, (STRLEN(?targetMotifMatchCigarP0ABK9MF_01182295) - STRLEN(REPLACE(?targetMotifMatchCigarP0ABK9MF_01182295, CONCAT('^(?:[a-z]*(?:[A-Z]|-)){', STR(?step1314), '}'), '')))), '[^-]', ''))) AS ?step2315) . BIND(((?step2315 + ?targetMotifMatchRegionMatchBeginPositionMF_01182296) - 1) AS ?thisPositionOn143) . BIND(?thisPositionOn143 AS ?thisPositionOn144) . BIND(?this AS ?pfs6t316) . BIND(URI(CONCAT(STR(?thisSequence), '#position', STR(?thisPositionOn143))) AS ?pfsb140) . BIND(URI(CONCAT(STR(?thisSequence), '#position', STR(?thisPositionOn144))) AS ?pfse141) . FILTER ((SUBSTR(?thisSequenceValue, ?thisPositionOn143, 1) = 'Q')) . BIND(?this AS ?pfs120) . } OPTIONAL { ?this up:sequence ?thisSequence . ?thisSequence rdf:value ?thisSequenceValue . ?templateMotifMatch321 faldo:location ?templateMotifSequenceMatchRegionP0ABK9322 ; edam:is_output_of ?templateMotifSequenceProfileAlignmentOperationP0ABK9324 ; rdf:type edam:data_0869 ; rdf:value ?templateMotifCigarP0ABK9MF_01182317 . ?templateMotifSequenceMatchRegionP0ABK9322 faldo:begin ?templateMotifSequenceMatchBeginP0ABK9323 . ?templateMotifSequenceMatchBeginP0ABK9323 faldo:position ?templateMotifSequenceMatchBeginPositionP0ABK9318 ; faldo:reference isoform:P0ABK9-1 . ?templateMotifSequenceProfileAlignmentOperationP0ABK9324 edam:has_input signature:MF_01182 ; rdf:type edam:operation_0300 . ?targetMotifMatch325 faldo:location ?targetMotifMatchRegionMatch326 ; edam:is_output_of ?targetMotifSequenceAlignmentOperationMF_01182328 ; rdf:type edam:data_0869 ; rdf:value ?targetMotifMatchCigarP0ABK9MF_01182319 . ?targetMotifMatchRegionMatch326 faldo:begin ?targetMotifMatchRegionMatchBeginMF_01182327 . ?targetMotifMatchRegionMatchBeginMF_01182327 faldo:position ?targetMotifMatchRegionMatchBeginPositionMF_01182320 ; faldo:reference ?thisSequence . ?targetMotifSequenceAlignmentOperationMF_01182328 edam:has_input signature:MF_01182 ; rdf:type edam:operation_0300 . BIND(?this AS ?tagFTGRP_6) . BIND(STRLEN(REPLACE(SUBSTR(?templateMotifCigarP0ABK9MF_01182317, 1, (STRLEN(?templateMotifCigarP0ABK9MF_01182317) - STRLEN(REPLACE(?templateMotifCigarP0ABK9MF_01182317, CONCAT('^(?:-*[^-]){', STR(((282 - ?templateMotifSequenceMatchBeginPositionP0ABK9318) + 1)), '}'), '')))), '[a-z]', '')) AS ?step1329) . BIND((STRLEN(SUBSTR(?targetMotifMatchCigarP0ABK9MF_01182319, 1, (STRLEN(?targetMotifMatchCigarP0ABK9MF_01182319) - STRLEN(REPLACE(?targetMotifMatchCigarP0ABK9MF_01182319, CONCAT('^(?:[a-z]*(?:[A-Z]|-)){', STR(?step1329), '}'), ''))))) - STRLEN(REPLACE(SUBSTR(?targetMotifMatchCigarP0ABK9MF_01182319, 1, (STRLEN(?targetMotifMatchCigarP0ABK9MF_01182319) - STRLEN(REPLACE(?targetMotifMatchCigarP0ABK9MF_01182319, CONCAT('^(?:[a-z]*(?:[A-Z]|-)){', STR(?step1329), '}'), '')))), '[^-]', ''))) AS ?step2330) . BIND(((?step2330 + ?targetMotifMatchRegionMatchBeginPositionMF_01182320) - 1) AS ?thisPositionOn150) . BIND(?thisPositionOn150 AS ?thisPositionOn151) . BIND(?this AS ?pfs7t331) . BIND(URI(CONCAT(STR(?thisSequence), '#position', STR(?thisPositionOn150))) AS ?pfsb147) . BIND(URI(CONCAT(STR(?thisSequence), '#position', STR(?thisPositionOn151))) AS ?pfse148) . FILTER ((SUBSTR(?thisSequenceValue, ?thisPositionOn150, 1) = 'C')) . BIND(STRLEN(REPLACE(SUBSTR(?templateMotifCigarP0ABK9MF_01182317, 1, (STRLEN(?templateMotifCigarP0ABK9MF_01182317) - STRLEN(REPLACE(?templateMotifCigarP0ABK9MF_01182317, CONCAT('^(?:-*[^-]){', STR(((285 - ?templateMotifSequenceMatchBeginPositionP0ABK9318) + 1)), '}'), '')))), '[a-z]', '')) AS ?step1332) . BIND((STRLEN(SUBSTR(?targetMotifMatchCigarP0ABK9MF_01182319, 1, (STRLEN(?targetMotifMatchCigarP0ABK9MF_01182319) - STRLEN(REPLACE(?targetMotifMatchCigarP0ABK9MF_01182319, CONCAT('^(?:[a-z]*(?:[A-Z]|-)){', STR(?step1332), '}'), ''))))) - STRLEN(REPLACE(SUBSTR(?targetMotifMatchCigarP0ABK9MF_01182319, 1, (STRLEN(?targetMotifMatchCigarP0ABK9MF_01182319) - STRLEN(REPLACE(?targetMotifMatchCigarP0ABK9MF_01182319, CONCAT('^(?:[a-z]*(?:[A-Z]|-)){', STR(?step1332), '}'), '')))), '[^-]', ''))) AS ?step2333) . BIND(((?step2333 + ?targetMotifMatchRegionMatchBeginPositionMF_01182320) - 1) AS ?thisPositionOn156) . BIND(?thisPositionOn156 AS ?thisPositionOn157) . BIND(?this AS ?pfs7t334) . BIND(URI(CONCAT(STR(?thisSequence), '#position', STR(?thisPositionOn156))) AS ?pfsb153) . BIND(URI(CONCAT(STR(?thisSequence), '#position', STR(?thisPositionOn157))) AS ?pfse154) . FILTER ((SUBSTR(?thisSequenceValue, ?thisPositionOn156, 1) = 'C')) . BIND(?this AS ?pfs145) . } OPTIONAL { ?this up:sequence ?thisSequence . ?thisSequence rdf:value ?thisSequenceValue . ?templateMotifMatch339 faldo:location ?templateMotifSequenceMatchRegionP0ABK9340 ; edam:is_output_of ?templateMotifSequenceProfileAlignmentOperationP0ABK9342 ; rdf:type edam:data_0869 ; rdf:value ?templateMotifCigarP0ABK9MF_01182335 . ?templateMotifSequenceMatchRegionP0ABK9340 faldo:begin ?templateMotifSequenceMatchBeginP0ABK9341 . ?templateMotifSequenceMatchBeginP0ABK9341 faldo:position ?templateMotifSequenceMatchBeginPositionP0ABK9336 ; faldo:reference isoform:P0ABK9-1 . ?templateMotifSequenceProfileAlignmentOperationP0ABK9342 edam:has_input signature:MF_01182 ; rdf:type edam:operation_0300 . ?targetMotifMatch343 faldo:location ?targetMotifMatchRegionMatch344 ; edam:is_output_of ?targetMotifSequenceAlignmentOperationMF_01182346 ; rdf:type edam:data_0869 ; rdf:value ?targetMotifMatchCigarP0ABK9MF_01182337 . ?targetMotifMatchRegionMatch344 faldo:begin ?targetMotifMatchRegionMatchBeginMF_01182345 . ?targetMotifMatchRegionMatchBeginMF_01182345 faldo:position ?targetMotifMatchRegionMatchBeginPositionMF_01182338 ; faldo:reference ?thisSequence . ?targetMotifSequenceAlignmentOperationMF_01182346 edam:has_input signature:MF_01182 ; rdf:type edam:operation_0300 . BIND(STRLEN(REPLACE(SUBSTR(?templateMotifCigarP0ABK9MF_01182335, 1, (STRLEN(?templateMotifCigarP0ABK9MF_01182335) - STRLEN(REPLACE(?templateMotifCigarP0ABK9MF_01182335, CONCAT('^(?:-*[^-]){', STR(((216 - ?templateMotifSequenceMatchBeginPositionP0ABK9336) + 1)), '}'), '')))), '[a-z]', '')) AS ?step1347) . BIND((STRLEN(SUBSTR(?targetMotifMatchCigarP0ABK9MF_01182337, 1, (STRLEN(?targetMotifMatchCigarP0ABK9MF_01182337) - STRLEN(REPLACE(?targetMotifMatchCigarP0ABK9MF_01182337, CONCAT('^(?:[a-z]*(?:[A-Z]|-)){', STR(?step1347), '}'), ''))))) - STRLEN(REPLACE(SUBSTR(?targetMotifMatchCigarP0ABK9MF_01182337, 1, (STRLEN(?targetMotifMatchCigarP0ABK9MF_01182337) - STRLEN(REPLACE(?targetMotifMatchCigarP0ABK9MF_01182337, CONCAT('^(?:[a-z]*(?:[A-Z]|-)){', STR(?step1347), '}'), '')))), '[^-]', ''))) AS ?step2348) . BIND(((?step2348 + ?targetMotifMatchRegionMatchBeginPositionMF_01182338) - 1) AS ?thisPositionOn164) . BIND(?thisPositionOn164 AS ?thisPositionOn165) . BIND(?this AS ?pfs8t349) . BIND(URI(CONCAT(STR(?thisSequence), '#position', STR(?thisPositionOn164))) AS ?pfsb160) . BIND(URI(CONCAT(STR(?thisSequence), '#position', STR(?thisPositionOn165))) AS ?pfse161) . FILTER ((SUBSTR(?thisSequenceValue, ?thisPositionOn164, 1) = 'Y')) . BIND(URI(CONCAT(STR(?this), '#MF_01182a159')) AS ?annotation159) . BIND(?this AS ?pfs158) . } OPTIONAL { ?this up:sequence ?thisSequence . ?thisSequence rdf:value ?thisSequenceValue . ?templateMotifMatch354 faldo:location ?templateMotifSequenceMatchRegionP0ABK9355 ; edam:is_output_of ?templateMotifSequenceProfileAlignmentOperationP0ABK9357 ; rdf:type edam:data_0869 ; rdf:value ?templateMotifCigarP0ABK9MF_01182350 . ?templateMotifSequenceMatchRegionP0ABK9355 faldo:begin ?templateMotifSequenceMatchBeginP0ABK9356 . ?templateMotifSequenceMatchBeginP0ABK9356 faldo:position ?templateMotifSequenceMatchBeginPositionP0ABK9351 ; faldo:reference isoform:P0ABK9-1 . ?templateMotifSequenceProfileAlignmentOperationP0ABK9357 edam:has_input signature:MF_01182 ; rdf:type edam:operation_0300 . ?targetMotifMatch358 faldo:location ?targetMotifMatchRegionMatch359 ; edam:is_output_of ?targetMotifSequenceAlignmentOperationMF_01182361 ; rdf:type edam:data_0869 ; rdf:value ?targetMotifMatchCigarP0ABK9MF_01182352 . ?targetMotifMatchRegionMatch359 faldo:begin ?targetMotifMatchRegionMatchBeginMF_01182360 . ?targetMotifMatchRegionMatchBeginMF_01182360 faldo:position ?targetMotifMatchRegionMatchBeginPositionMF_01182353 ; faldo:reference ?thisSequence . ?targetMotifSequenceAlignmentOperationMF_01182361 edam:has_input signature:MF_01182 ; rdf:type edam:operation_0300 . BIND(STRLEN(REPLACE(SUBSTR(?templateMotifCigarP0ABK9MF_01182350, 1, (STRLEN(?templateMotifCigarP0ABK9MF_01182350) - STRLEN(REPLACE(?templateMotifCigarP0ABK9MF_01182350, CONCAT('^(?:-*[^-]){', STR(((264 - ?templateMotifSequenceMatchBeginPositionP0ABK9351) + 1)), '}'), '')))), '[a-z]', '')) AS ?step1362) . BIND((STRLEN(SUBSTR(?targetMotifMatchCigarP0ABK9MF_01182352, 1, (STRLEN(?targetMotifMatchCigarP0ABK9MF_01182352) - STRLEN(REPLACE(?targetMotifMatchCigarP0ABK9MF_01182352, CONCAT('^(?:[a-z]*(?:[A-Z]|-)){', STR(?step1362), '}'), ''))))) - STRLEN(REPLACE(SUBSTR(?targetMotifMatchCigarP0ABK9MF_01182352, 1, (STRLEN(?targetMotifMatchCigarP0ABK9MF_01182352) - STRLEN(REPLACE(?targetMotifMatchCigarP0ABK9MF_01182352, CONCAT('^(?:[a-z]*(?:[A-Z]|-)){', STR(?step1362), '}'), '')))), '[^-]', ''))) AS ?step2363) . BIND(((?step2363 + ?targetMotifMatchRegionMatchBeginPositionMF_01182353) - 1) AS ?thisPositionOn172) . BIND(?thisPositionOn172 AS ?thisPositionOn173) . BIND(?this AS ?pfs8t364) . BIND(URI(CONCAT(STR(?thisSequence), '#position', STR(?thisPositionOn172))) AS ?pfsb168) . BIND(URI(CONCAT(STR(?thisSequence), '#position', STR(?thisPositionOn173))) AS ?pfse169) . FILTER ((SUBSTR(?thisSequenceValue, ?thisPositionOn172, 1) = 'H')) . BIND(URI(CONCAT(STR(?this), '#MF_01182a167')) AS ?annotation167) . BIND(?this AS ?pfs166) . } OPTIONAL { ?this a up:Protein . BIND(?this AS ?caseWithTag365) . } BIND(IF(BOUND(?tagFTGRP_2), ?caseWithTag365, ?UNBOUND_VARIABLE) AS ?case10) . OPTIONAL { ?this a up:Protein . BIND(?this AS ?caseWithTag366) . } BIND(IF(BOUND(?tagFTGRP_1), ?caseWithTag366, ?UNBOUND_VARIABLE) AS ?case11) . OPTIONAL { ?this a up:Protein . BIND(?this AS ?caseWithTag367) . } BIND(IF((BOUND(?tagFTGRP_3) || BOUND(?tagFTGRP_4) || BOUND(?tagFTGRP_5) || BOUND(?tagFTGRP_6) || BOUND(?tagFTGRP_7)), ?caseWithTag367, ?UNBOUND_VARIABLE) AS ?case12) . OPTIONAL { ?this up:annotation ?samsignal368 ; up:sequence ?thisSequence . ?samsignal368 up:range ?samsignalr369 ; rdf:type up:Signal_Peptide_Annotation . ?samsignalr369 faldo:begin ?samsignalb370 ; faldo:end ?samsignale371 . ?samsignalb370 faldo:position ?samsignalbp372 ; faldo:reference ?thisSequence . ?samsignale371 faldo:position ?samsignalep373 ; faldo:reference ?thisSequence . BIND(?this AS ?sam174) . } BIND(URI(CONCAT(STR(?this), '#MF_01182a180')) AS ?keyword180) . }