CONSTRUCT { _:424955 up:source unirule:MF_01225 . _:424956 up:source unirule:MF_01225 . _:424957 up:source unirule:MF_01225 . _:424958 up:source unirule:MF_01225 . _:424959 up:source unirule:MF_01225 . _:424960 up:source unirule:MF_01225 . _:424961 up:source unirule:MF_01225 . _:424962 up:source unirule:MF_01225 . _:424963 up:source unirule:MF_01225 . _:424964 up:source unirule:MF_01225 . _:424965 up:source unirule:MF_01225 . _:424966 up:source unirule:MF_01225 . _:424967 up:source unirule:MF_01225 . _:424968 up:source unirule:MF_01225 . _:424969 up:source unirule:MF_01225 . _:424970 up:source unirule:MF_01225 . _:424971 up:source unirule:MF_01225 . _:424972 up:source unirule:MF_01225 . _:424973 up:source unirule:MF_01225 . _:424974 up:source unirule:MF_01225 . _:424975 up:source unirule:MF_01225 . _:424976 up:source unirule:MF_01225 . _:424977 up:source unirule:MF_01225 . _:424978 up:source unirule:MF_01225 . _:424979 up:source unirule:MF_01225 . _:424980 up:source unirule:MF_01225 . _:424981 up:source unirule:MF_01225 . _:424982 up:source unirule:MF_01225 . _:424983 up:source unirule:MF_01225 . _:424984 up:source unirule:MF_01225 . _:424985 up:source unirule:MF_01225 . _:424986 up:source unirule:MF_01225 . _:424987 up:source unirule:MF_01225 . _:424988 up:source unirule:MF_01225 . _:424989 up:source unirule:MF_01225 . _:424990 up:source unirule:MF_01225 . _:424991 up:source unirule:MF_01225 . _:424992 up:source unirule:MF_01225 . _:424993 up:source unirule:MF_01225 . _:424994 up:source unirule:MF_01225 . _:424995 up:source unirule:MF_01225 . _:424996 up:source unirule:MF_01225 . _:424997 up:source unirule:MF_01225 . _:424998 up:source unirule:MF_01225 . _:424999 up:source unirule:MF_01225 . _:425000 up:source unirule:MF_01225 . _:425001 up:source unirule:MF_01225 . _:425002 up:source unirule:MF_01225 . _:425003 up:source unirule:MF_01225 . _:425004 up:source unirule:MF_01225 . _:425005 up:source unirule:MF_01225 . _:425006 up:source unirule:MF_01225 . _:425007 up:source unirule:MF_01225 . _:425008 up:source unirule:MF_01225 . ?this up:annotation ?annotation1 , ?annotation2 , ?annotation4 , ?annotation5 , ?annotation6 ; up:classifiedWith GO:0005525 , GO:0006777 , GO:0051539 , GO:0061798 , GO:1904047 , keyword:342 , keyword:408 , keyword:411 , keyword:456 , keyword:479 , keyword:4 , keyword:501 , keyword:547 , keyword:949 . ?gene0 skos:prefLabel 'moaA' . ?annotation1 a up:Function_Annotation ; rdfs:comment "Catalyzes the cyclization of GTP to (8S)-3',8-cyclo-7,8-dihydroguanosine 5'-triphosphate." . ?annotation2 up:activity ?activity3 ; rdf:type up:Catalytic_Activity_Annotation . ?activity3 up:catalyticActivity <http://rdf.rhea-db.org/49576>; up:enzymeClass <http://purl.uniprot.org/enzyme/4.1.99.22>. ?annotation4 up:cofactor chebi:49883 ; rdf:type up:Cofactor_Annotation ; rdfs:comment 'Binds 2 [4Fe-4S] clusters. Binds 1 [4Fe-4S] cluster coordinated with 3 cysteines and an exchangeable S-adenosyl-L-methionine and 1 [4Fe-4S] cluster coordinated with 3 cysteines and the GTP-derived substrate.' . ?annotation5 a up:Pathway_Annotation ; rdfs:comment 'Cofactor biosynthesis; molybdopterin biosynthesis.' . ?annotation6 a up:Similarity_Annotation ; rdfs:comment 'Belongs to the radical SAM superfamily. MoaA family.' . ?case7 up:alternativeName ?name9 ; up:recommendedName ?name8 . ?name8 up:ecName '4.1.99.22' ; up:fullName "Probable GTP 3',8-cyclase" ; rdf:type up:Structured_Name . ?name9 up:fullName 'Molybdenum cofactor biosynthesis protein A' ; rdf:type up:Structured_Name . ?case10 up:alternativeName ?name12 ; up:recommendedName ?name11 . ?name11 up:ecName '4.1.99.22' ; up:fullName "GTP 3',8-cyclase" ; rdf:type up:Structured_Name . ?name12 up:fullName 'Molybdenum cofactor biosynthesis protein A' ; rdf:type up:Structured_Name . ?pfs13 up:annotation ?annotation14 . ?annotation14 faldo:begin ?pfsb15 ; faldo:end ?pfse16 ; up:ligand ?ligand17 ; rdf:type up:Binding_Site_Annotation . ?pfsb15 faldo:position ?thisPositionOn18 ; rdf:type faldo:ExactPosition . ?pfse16 faldo:position ?thisPositionOn19 ; rdf:type faldo:ExactPosition . ?ligand17 rdfs:subClassOf chebi:37565 . ?pfs20 up:annotation ?annotation21 . ?annotation21 faldo:begin ?pfsb22 ; faldo:end ?pfse23 ; up:ligand ?ligand24 ; rdf:type up:Binding_Site_Annotation . ?pfsb22 faldo:position ?thisPositionOn25 ; rdf:type faldo:ExactPosition . ?pfse23 faldo:position ?thisPositionOn26 ; rdf:type faldo:ExactPosition . ?ligand24 rdfs:subClassOf chebi:49883 . ?pfs27 up:annotation ?annotation28 . ?annotation28 faldo:begin ?pfsb29 ; faldo:end ?pfse30 ; up:ligand ?ligand31 ; rdf:type up:Binding_Site_Annotation . ?pfsb29 faldo:position ?thisPositionOn32 ; rdf:type faldo:ExactPosition . ?pfse30 faldo:position ?thisPositionOn33 ; rdf:type faldo:ExactPosition . ?ligand31 rdfs:subClassOf chebi:49883 . ?pfs34 up:annotation ?annotation35 . ?annotation35 faldo:begin ?pfsb36 ; faldo:end ?pfse37 ; up:ligand ?ligand38 ; rdf:type up:Binding_Site_Annotation . ?pfsb36 faldo:position ?thisPositionOn39 ; rdf:type faldo:ExactPosition . ?pfse37 faldo:position ?thisPositionOn40 ; rdf:type faldo:ExactPosition . ?ligand38 rdfs:subClassOf chebi:49883 . ?pfs41 up:annotation ?annotation42 . ?annotation42 faldo:begin ?pfsb43 ; faldo:end ?pfse44 ; up:ligand ?ligand45 ; rdf:type up:Binding_Site_Annotation . ?pfsb43 faldo:position ?thisPositionOn46 ; rdf:type faldo:ExactPosition . ?pfse44 faldo:position ?thisPositionOn47 ; rdf:type faldo:ExactPosition . ?ligand45 rdfs:subClassOf chebi:49883 . ?pfs48 up:annotation ?annotation49 . ?annotation49 faldo:begin ?pfsb50 ; faldo:end ?pfse51 ; up:ligand ?ligand52 ; rdf:type up:Binding_Site_Annotation . ?pfsb50 faldo:position ?thisPositionOn53 ; rdf:type faldo:ExactPosition . ?pfse51 faldo:position ?thisPositionOn54 ; rdf:type faldo:ExactPosition . ?ligand52 rdfs:subClassOf chebi:49883 . ?pfs55 up:annotation ?annotation56 . ?annotation56 faldo:begin ?pfsb57 ; faldo:end ?pfse58 ; up:ligand ?ligand59 ; rdf:type up:Binding_Site_Annotation . ?pfsb57 faldo:position ?thisPositionOn60 ; rdf:type faldo:ExactPosition . ?pfse58 faldo:position ?thisPositionOn61 ; rdf:type faldo:ExactPosition . ?ligand59 rdfs:subClassOf chebi:49883 . ?pfs62 up:annotation ?annotation63 . ?annotation63 faldo:begin ?pfsb64 ; faldo:end ?pfse65 ; up:ligand ?ligand66 ; rdf:type up:Binding_Site_Annotation . ?pfsb64 faldo:position ?thisPositionOn67 ; rdf:type faldo:ExactPosition . ?pfse65 faldo:position ?thisPositionOn68 ; rdf:type faldo:ExactPosition . ?ligand66 rdfs:subClassOf chebi:37565 . ?pfs69 up:annotation ?annotation70 . ?annotation70 faldo:begin ?pfsb71 ; faldo:end ?pfse72 ; up:ligand ?ligand73 ; rdf:type up:Binding_Site_Annotation . ?pfsb71 faldo:position ?thisPositionOn74 ; rdf:type faldo:ExactPosition . ?pfse72 faldo:position ?thisPositionOn75 ; rdf:type faldo:ExactPosition . ?ligand73 rdfs:subClassOf chebi:59789 . ?pfs76 up:annotation ?annotation77 . ?annotation77 faldo:begin ?pfsb78 ; faldo:end ?pfse79 ; up:ligand ?ligand80 ; rdf:type up:Binding_Site_Annotation . ?pfsb78 faldo:position ?thisPositionOn81 ; rdf:type faldo:ExactPosition . ?pfse79 faldo:position ?thisPositionOn82 ; rdf:type faldo:ExactPosition . ?ligand80 rdfs:subClassOf chebi:37565 . ?pfs83 up:annotation ?annotation84 . ?annotation84 faldo:begin ?pfsb85 ; faldo:end ?pfse86 ; up:ligand ?ligand87 ; rdf:type up:Binding_Site_Annotation . ?pfsb85 faldo:position ?thisPositionOn88 ; rdf:type faldo:ExactPosition . ?pfse86 faldo:position ?thisPositionOn89 ; rdf:type faldo:ExactPosition . ?ligand87 rdfs:subClassOf chebi:59789 . ?pfs90 up:annotation ?annotation91 . ?annotation91 faldo:begin ?pfsb92 ; faldo:end ?pfse93 ; up:ligand ?ligand94 ; rdf:type up:Binding_Site_Annotation . ?pfsb92 faldo:position ?thisPositionOn95 ; rdf:type faldo:ExactPosition . ?pfse93 faldo:position ?thisPositionOn96 ; rdf:type faldo:ExactPosition . ?ligand94 rdfs:subClassOf chebi:37565 . ?pfs97 up:annotation ?annotation98 . ?annotation98 faldo:begin ?pfsb99 ; faldo:end ?pfse100 ; up:ligand ?ligand101 ; rdf:type up:Binding_Site_Annotation . ?pfsb99 faldo:position ?thisPositionOn102 ; rdf:type faldo:ExactPosition . ?pfse100 faldo:position ?thisPositionOn103 ; rdf:type faldo:ExactPosition . ?ligand101 rdfs:subClassOf chebi:59789 . ?pfs104 up:annotation ?annotation105 . ?annotation105 faldo:begin ?pfsb106 ; faldo:end ?pfse107 ; up:ligand ?ligand108 ; rdf:type up:Binding_Site_Annotation . ?pfsb106 faldo:position ?thisPositionOn109 ; rdf:type faldo:ExactPosition . ?pfse107 faldo:position ?thisPositionOn110 ; rdf:type faldo:ExactPosition . ?ligand108 rdfs:subClassOf chebi:37565 . ?pfs111 up:annotation ?annotation112 . ?annotation112 faldo:begin ?pfsb113 ; faldo:end ?pfse114 ; up:ligand ?ligand115 ; rdf:type up:Binding_Site_Annotation . ?pfsb113 faldo:position ?thisPositionOn116 ; rdf:type faldo:ExactPosition . ?pfse114 faldo:position ?thisPositionOn117 ; rdf:type faldo:ExactPosition . ?ligand115 rdfs:subClassOf chebi:59789 . ?pfs118 up:annotation ?annotation119 . ?annotation119 faldo:begin ?pfsb120 ; faldo:end ?pfse121 ; up:ligand ?ligand122 ; rdf:type up:Binding_Site_Annotation . ?pfsb120 faldo:position ?thisPositionOn123 ; rdf:type faldo:ExactPosition . ?pfse121 faldo:position ?thisPositionOn124 ; rdf:type faldo:ExactPosition . ?ligand122 rdfs:subClassOf chebi:37565 . ?pfs125 up:annotation ?annotation126 . ?annotation126 faldo:begin ?pfsb127 ; faldo:end ?pfse128 ; up:ligand ?ligand129 ; rdf:type up:Binding_Site_Annotation . ?pfsb127 faldo:position ?thisPositionOn130 ; rdf:type faldo:ExactPosition . ?pfse128 faldo:position ?thisPositionOn131 ; rdf:type faldo:ExactPosition . ?ligand129 rdfs:subClassOf chebi:49883 . ?pfs132 up:annotation ?annotation133 . ?annotation133 faldo:begin ?pfsb134 ; faldo:end ?pfse135 ; up:ligand ?ligand136 ; rdf:type up:Binding_Site_Annotation . ?pfsb134 faldo:position ?thisPositionOn137 ; rdf:type faldo:ExactPosition . ?pfse135 faldo:position ?thisPositionOn138 ; rdf:type faldo:ExactPosition . ?ligand136 rdfs:subClassOf chebi:49883 . ?pfs139 up:annotation ?annotation140 . ?annotation140 faldo:begin ?pfsb141 ; faldo:end ?pfse142 ; up:ligand ?ligand143 ; rdf:type up:Binding_Site_Annotation . ?pfsb141 faldo:position ?thisPositionOn144 ; rdf:type faldo:ExactPosition . ?pfse142 faldo:position ?thisPositionOn145 ; rdf:type faldo:ExactPosition . ?ligand143 rdfs:subClassOf chebi:49883 . ?pfs146 up:annotation ?annotation147 . ?annotation147 faldo:begin ?pfsb148 ; faldo:end ?pfse149 ; up:ligand ?ligand150 ; rdf:type up:Binding_Site_Annotation . ?pfsb148 faldo:position ?thisPositionOn151 ; rdf:type faldo:ExactPosition . ?pfse149 faldo:position ?thisPositionOn152 ; rdf:type faldo:ExactPosition . ?ligand150 rdfs:subClassOf chebi:49883 . ?pfs153 up:annotation ?annotation154 . ?annotation154 faldo:begin ?pfsb155 ; faldo:end ?pfse156 ; up:ligand ?ligand157 ; rdf:type up:Binding_Site_Annotation . ?pfsb155 faldo:position ?thisPositionOn158 ; rdf:type faldo:ExactPosition . ?pfse156 faldo:position ?thisPositionOn159 ; rdf:type faldo:ExactPosition . ?ligand157 rdfs:subClassOf chebi:49883 . ?pfs160 up:annotation ?annotation161 . ?annotation161 faldo:begin ?pfsb162 ; faldo:end ?pfse163 ; up:ligand ?ligand164 ; rdf:type up:Binding_Site_Annotation . ?pfsb162 faldo:position ?thisPositionOn165 ; rdf:type faldo:ExactPosition . ?pfse163 faldo:position ?thisPositionOn166 ; rdf:type faldo:ExactPosition . ?ligand164 rdfs:subClassOf chebi:49883 . ?pfs167 up:annotation ?annotation168 . ?annotation168 faldo:begin ?pfsb169 ; faldo:end ?pfse170 ; up:ligand ?ligand171 ; rdf:type up:Binding_Site_Annotation . ?pfsb169 faldo:position ?thisPositionOn172 ; rdf:type faldo:ExactPosition . ?pfse170 faldo:position ?thisPositionOn173 ; rdf:type faldo:ExactPosition . ?ligand171 rdfs:subClassOf chebi:37565 . ?pfs174 up:annotation ?annotation175 . ?annotation175 faldo:begin ?pfsb176 ; faldo:end ?pfse177 ; up:ligand ?ligand178 ; rdf:type up:Binding_Site_Annotation . ?pfsb176 faldo:position ?thisPositionOn179 ; rdf:type faldo:ExactPosition . ?pfse177 faldo:position ?thisPositionOn180 ; rdf:type faldo:ExactPosition . ?ligand178 rdfs:subClassOf chebi:59789 . ?pfs181 up:annotation ?annotation182 . ?annotation182 faldo:begin ?pfsb183 ; faldo:end ?pfse184 ; up:ligand ?ligand185 ; rdf:type up:Binding_Site_Annotation . ?pfsb183 faldo:position ?thisPositionOn186 ; rdf:type faldo:ExactPosition . ?pfse184 faldo:position ?thisPositionOn187 ; rdf:type faldo:ExactPosition . ?ligand185 rdfs:subClassOf chebi:37565 . ?pfs188 up:annotation ?annotation189 . ?annotation189 faldo:begin ?pfsb190 ; faldo:end ?pfse191 ; up:ligand ?ligand192 ; rdf:type up:Binding_Site_Annotation . ?pfsb190 faldo:position ?thisPositionOn193 ; rdf:type faldo:ExactPosition . ?pfse191 faldo:position ?thisPositionOn194 ; rdf:type faldo:ExactPosition . ?ligand192 rdfs:subClassOf chebi:59789 . ?pfs195 up:annotation ?annotation196 . ?annotation196 faldo:begin ?pfsb197 ; faldo:end ?pfse198 ; up:ligand ?ligand199 ; rdf:type up:Binding_Site_Annotation . ?pfsb197 faldo:position ?thisPositionOn200 ; rdf:type faldo:ExactPosition . ?pfse198 faldo:position ?thisPositionOn201 ; rdf:type faldo:ExactPosition . ?ligand199 rdfs:subClassOf chebi:37565 . ?pfs202 up:annotation ?annotation203 . ?annotation203 faldo:begin ?pfsb204 ; faldo:end ?pfse205 ; up:ligand ?ligand206 ; rdf:type up:Binding_Site_Annotation . ?pfsb204 faldo:position ?thisPositionOn207 ; rdf:type faldo:ExactPosition . ?pfse205 faldo:position ?thisPositionOn208 ; rdf:type faldo:ExactPosition . ?ligand206 rdfs:subClassOf chebi:59789 . ?pfs209 up:annotation ?annotation210 . ?annotation210 faldo:begin ?pfsb211 ; faldo:end ?pfse212 ; up:ligand ?ligand213 ; rdf:type up:Binding_Site_Annotation . ?pfsb211 faldo:position ?thisPositionOn214 ; rdf:type faldo:ExactPosition . ?pfse212 faldo:position ?thisPositionOn215 ; rdf:type faldo:ExactPosition . ?ligand213 rdfs:subClassOf chebi:37565 . ?pfs216 up:annotation ?annotation217 . ?annotation217 faldo:begin ?pfsb218 ; faldo:end ?pfse219 ; up:ligand ?ligand220 ; rdf:type up:Binding_Site_Annotation . ?pfsb218 faldo:position ?thisPositionOn221 ; rdf:type faldo:ExactPosition . ?pfse219 faldo:position ?thisPositionOn222 ; rdf:type faldo:ExactPosition . ?ligand220 rdfs:subClassOf chebi:59789 . _:425009 a rdf:Statement ; up:attribution _:424955 ; rdf:subject ?gene0 ; rdf:predicate up:encodedBy ; rdf:object ?gene0 . _:425010 a rdf:Statement ; up:attribution _:424956 ; rdf:subject ?this ; rdf:predicate up:annotation ; rdf:object ?annotation1 . _:425011 a rdf:Statement ; up:attribution _:424957 ; rdf:subject ?this ; rdf:predicate up:annotation ; rdf:object ?annotation2 . _:425012 a rdf:Statement ; up:attribution _:424958 ; rdf:subject ?this ; rdf:predicate up:annotation ; rdf:object ?annotation4 . _:425013 a rdf:Statement ; up:attribution _:424959 ; rdf:subject ?this ; rdf:predicate up:annotation ; rdf:object ?annotation5 . _:425014 a rdf:Statement ; up:attribution _:424960 ; rdf:subject ?this ; rdf:predicate up:annotation ; rdf:object ?annotation6 . _:425015 a rdf:Statement ; up:attribution _:424961 ; rdf:subject ?this ; rdf:predicate up:classifiedWith ; rdf:object keyword:4 . _:425016 a rdf:Statement ; up:attribution _:424962 ; rdf:subject ?this ; rdf:predicate up:classifiedWith ; rdf:object keyword:342 . _:425017 a rdf:Statement ; up:attribution _:424963 ; rdf:subject ?this ; rdf:predicate up:classifiedWith ; rdf:object keyword:408 . _:425018 a rdf:Statement ; up:attribution _:424964 ; rdf:subject ?this ; rdf:predicate up:classifiedWith ; rdf:object keyword:411 . _:425019 a rdf:Statement ; up:attribution _:424965 ; rdf:subject ?this ; rdf:predicate up:classifiedWith ; rdf:object keyword:456 . _:425020 a rdf:Statement ; up:attribution _:424966 ; rdf:subject ?this ; rdf:predicate up:classifiedWith ; rdf:object keyword:479 . _:425021 a rdf:Statement ; up:attribution _:424967 ; rdf:subject ?this ; rdf:predicate up:classifiedWith ; rdf:object keyword:501 . _:425022 a rdf:Statement ; up:attribution _:424968 ; rdf:subject ?this ; rdf:predicate up:classifiedWith ; rdf:object keyword:547 . _:425023 a rdf:Statement ; up:attribution _:424969 ; rdf:subject ?this ; rdf:predicate up:classifiedWith ; rdf:object keyword:949 . _:425024 a rdf:Statement ; up:attribution _:424970 ; rdf:subject ?this ; rdf:predicate up:classifiedWith ; rdf:object GO:0005525 . _:425025 a rdf:Statement ; up:attribution _:424971 ; rdf:subject ?this ; rdf:predicate up:classifiedWith ; rdf:object GO:0051539 . _:425026 a rdf:Statement ; up:attribution _:424972 ; rdf:subject ?this ; rdf:predicate up:classifiedWith ; rdf:object GO:0061798 . _:425027 a rdf:Statement ; up:attribution _:424973 ; rdf:subject ?this ; rdf:predicate up:classifiedWith ; rdf:object GO:1904047 . _:425028 a rdf:Statement ; up:attribution _:424974 ; rdf:subject ?this ; rdf:predicate up:classifiedWith ; rdf:object GO:0006777 . _:425029 a rdf:Statement ; up:attribution _:424975 ; rdf:subject ?case7 ; rdf:predicate up:recommendedName ; rdf:object ?name8 . _:425030 a rdf:Statement ; up:attribution _:424976 ; rdf:subject ?case7 ; rdf:predicate up:alternativeName ; rdf:object ?name9 . _:425031 a rdf:Statement ; up:attribution _:424977 ; rdf:subject ?case10 ; rdf:predicate up:recommendedName ; rdf:object ?name11 . _:425032 a rdf:Statement ; up:attribution _:424978 ; rdf:subject ?case10 ; rdf:predicate up:alternativeName ; rdf:object ?name12 . _:425033 a rdf:Statement ; up:source unirule:MF_01225 ; rdf:subject ?pfs13 ; rdf:predicate up:annotation ; rdf:object ?annotation14 . _:425034 a rdf:Statement ; up:attribution _:424979 ; rdf:subject ?pfs13 ; rdf:predicate up:annotation ; rdf:object ?annotation14 . _:425035 a rdf:Statement ; up:source unirule:MF_01225 ; rdf:subject ?pfs20 ; rdf:predicate up:annotation ; rdf:object ?annotation21 . _:425036 a rdf:Statement ; up:attribution _:424980 ; rdf:subject ?pfs20 ; rdf:predicate up:annotation ; rdf:object ?annotation21 . _:425037 a rdf:Statement ; up:source unirule:MF_01225 ; rdf:subject ?pfs27 ; rdf:predicate up:annotation ; rdf:object ?annotation28 . _:425038 a rdf:Statement ; up:attribution _:424981 ; rdf:subject ?pfs27 ; rdf:predicate up:annotation ; rdf:object ?annotation28 . _:425039 a rdf:Statement ; up:source unirule:MF_01225 ; rdf:subject ?pfs34 ; rdf:predicate up:annotation ; rdf:object ?annotation35 . _:425040 a rdf:Statement ; up:attribution _:424982 ; rdf:subject ?pfs34 ; rdf:predicate up:annotation ; rdf:object ?annotation35 . _:425041 a rdf:Statement ; up:source unirule:MF_01225 ; rdf:subject ?pfs41 ; rdf:predicate up:annotation ; rdf:object ?annotation42 . _:425042 a rdf:Statement ; up:attribution _:424983 ; rdf:subject ?pfs41 ; rdf:predicate up:annotation ; rdf:object ?annotation42 . _:425043 a rdf:Statement ; up:source unirule:MF_01225 ; rdf:subject ?pfs48 ; rdf:predicate up:annotation ; rdf:object ?annotation49 . _:425044 a rdf:Statement ; up:attribution _:424984 ; rdf:subject ?pfs48 ; rdf:predicate up:annotation ; rdf:object ?annotation49 . _:425045 a rdf:Statement ; up:source unirule:MF_01225 ; rdf:subject ?pfs55 ; rdf:predicate up:annotation ; rdf:object ?annotation56 . _:425046 a rdf:Statement ; up:attribution _:424985 ; rdf:subject ?pfs55 ; rdf:predicate up:annotation ; rdf:object ?annotation56 . _:425047 a rdf:Statement ; up:source unirule:MF_01225 ; rdf:subject ?pfs62 ; rdf:predicate up:annotation ; rdf:object ?annotation63 . _:425048 a rdf:Statement ; up:attribution _:424986 ; rdf:subject ?pfs62 ; rdf:predicate up:annotation ; rdf:object ?annotation63 . _:425049 a rdf:Statement ; up:source unirule:MF_01225 ; rdf:subject ?pfs69 ; rdf:predicate up:annotation ; rdf:object ?annotation70 . _:425050 a rdf:Statement ; up:attribution _:424987 ; rdf:subject ?pfs69 ; rdf:predicate up:annotation ; rdf:object ?annotation70 . _:425051 a rdf:Statement ; up:source unirule:MF_01225 ; rdf:subject ?pfs76 ; rdf:predicate up:annotation ; rdf:object ?annotation77 . _:425052 a rdf:Statement ; up:attribution _:424988 ; rdf:subject ?pfs76 ; rdf:predicate up:annotation ; rdf:object ?annotation77 . _:425053 a rdf:Statement ; up:source unirule:MF_01225 ; rdf:subject ?pfs83 ; rdf:predicate up:annotation ; rdf:object ?annotation84 . _:425054 a rdf:Statement ; up:attribution _:424989 ; rdf:subject ?pfs83 ; rdf:predicate up:annotation ; rdf:object ?annotation84 . _:425055 a rdf:Statement ; up:source unirule:MF_01225 ; rdf:subject ?pfs90 ; rdf:predicate up:annotation ; rdf:object ?annotation91 . _:425056 a rdf:Statement ; up:attribution _:424990 ; rdf:subject ?pfs90 ; rdf:predicate up:annotation ; rdf:object ?annotation91 . _:425057 a rdf:Statement ; up:source unirule:MF_01225 ; rdf:subject ?pfs97 ; rdf:predicate up:annotation ; rdf:object ?annotation98 . _:425058 a rdf:Statement ; up:attribution _:424991 ; rdf:subject ?pfs97 ; rdf:predicate up:annotation ; rdf:object ?annotation98 . _:425059 a rdf:Statement ; up:source unirule:MF_01225 ; rdf:subject ?pfs104 ; rdf:predicate up:annotation ; rdf:object ?annotation105 . _:425060 a rdf:Statement ; up:attribution _:424992 ; rdf:subject ?pfs104 ; rdf:predicate up:annotation ; rdf:object ?annotation105 . _:425061 a rdf:Statement ; up:source unirule:MF_01225 ; rdf:subject ?pfs111 ; rdf:predicate up:annotation ; rdf:object ?annotation112 . _:425062 a rdf:Statement ; up:attribution _:424993 ; rdf:subject ?pfs111 ; rdf:predicate up:annotation ; rdf:object ?annotation112 . _:425063 a rdf:Statement ; up:source unirule:MF_01225 ; rdf:subject ?pfs118 ; rdf:predicate up:annotation ; rdf:object ?annotation119 . _:425064 a rdf:Statement ; up:attribution _:424994 ; rdf:subject ?pfs118 ; rdf:predicate up:annotation ; rdf:object ?annotation119 . _:425065 a rdf:Statement ; up:source unirule:MF_01225 ; rdf:subject ?pfs125 ; rdf:predicate up:annotation ; rdf:object ?annotation126 . _:425066 a rdf:Statement ; up:attribution _:424995 ; rdf:subject ?pfs125 ; rdf:predicate up:annotation ; rdf:object ?annotation126 . _:425067 a rdf:Statement ; up:source unirule:MF_01225 ; rdf:subject ?pfs132 ; rdf:predicate up:annotation ; rdf:object ?annotation133 . _:425068 a rdf:Statement ; up:attribution _:424996 ; rdf:subject ?pfs132 ; rdf:predicate up:annotation ; rdf:object ?annotation133 . _:425069 a rdf:Statement ; up:source unirule:MF_01225 ; rdf:subject ?pfs139 ; rdf:predicate up:annotation ; rdf:object ?annotation140 . _:425070 a rdf:Statement ; up:attribution _:424997 ; rdf:subject ?pfs139 ; rdf:predicate up:annotation ; rdf:object ?annotation140 . _:425071 a rdf:Statement ; up:source unirule:MF_01225 ; rdf:subject ?pfs146 ; rdf:predicate up:annotation ; rdf:object ?annotation147 . _:425072 a rdf:Statement ; up:attribution _:424998 ; rdf:subject ?pfs146 ; rdf:predicate up:annotation ; rdf:object ?annotation147 . _:425073 a rdf:Statement ; up:source unirule:MF_01225 ; rdf:subject ?pfs153 ; rdf:predicate up:annotation ; rdf:object ?annotation154 . _:425074 a rdf:Statement ; up:attribution _:424999 ; rdf:subject ?pfs153 ; rdf:predicate up:annotation ; rdf:object ?annotation154 . _:425075 a rdf:Statement ; up:source unirule:MF_01225 ; rdf:subject ?pfs160 ; rdf:predicate up:annotation ; rdf:object ?annotation161 . _:425076 a rdf:Statement ; up:attribution _:425000 ; rdf:subject ?pfs160 ; rdf:predicate up:annotation ; rdf:object ?annotation161 . _:425077 a rdf:Statement ; up:source unirule:MF_01225 ; rdf:subject ?pfs167 ; rdf:predicate up:annotation ; rdf:object ?annotation168 . _:425078 a rdf:Statement ; up:attribution _:425001 ; rdf:subject ?pfs167 ; rdf:predicate up:annotation ; rdf:object ?annotation168 . _:425079 a rdf:Statement ; up:source unirule:MF_01225 ; rdf:subject ?pfs174 ; rdf:predicate up:annotation ; rdf:object ?annotation175 . _:425080 a rdf:Statement ; up:attribution _:425002 ; rdf:subject ?pfs174 ; rdf:predicate up:annotation ; rdf:object ?annotation175 . _:425081 a rdf:Statement ; up:source unirule:MF_01225 ; rdf:subject ?pfs181 ; rdf:predicate up:annotation ; rdf:object ?annotation182 . _:425082 a rdf:Statement ; up:attribution _:425003 ; rdf:subject ?pfs181 ; rdf:predicate up:annotation ; rdf:object ?annotation182 . _:425083 a rdf:Statement ; up:source unirule:MF_01225 ; rdf:subject ?pfs188 ; rdf:predicate up:annotation ; rdf:object ?annotation189 . _:425084 a rdf:Statement ; up:attribution _:425004 ; rdf:subject ?pfs188 ; rdf:predicate up:annotation ; rdf:object ?annotation189 . _:425085 a rdf:Statement ; up:source unirule:MF_01225 ; rdf:subject ?pfs195 ; rdf:predicate up:annotation ; rdf:object ?annotation196 . _:425086 a rdf:Statement ; up:attribution _:425005 ; rdf:subject ?pfs195 ; rdf:predicate up:annotation ; rdf:object ?annotation196 . _:425087 a rdf:Statement ; up:source unirule:MF_01225 ; rdf:subject ?pfs202 ; rdf:predicate up:annotation ; rdf:object ?annotation203 . _:425088 a rdf:Statement ; up:attribution _:425006 ; rdf:subject ?pfs202 ; rdf:predicate up:annotation ; rdf:object ?annotation203 . _:425089 a rdf:Statement ; up:source unirule:MF_01225 ; rdf:subject ?pfs209 ; rdf:predicate up:annotation ; rdf:object ?annotation210 . _:425090 a rdf:Statement ; up:attribution _:425007 ; rdf:subject ?pfs209 ; rdf:predicate up:annotation ; rdf:object ?annotation210 . _:425091 a rdf:Statement ; up:source unirule:MF_01225 ; rdf:subject ?pfs216 ; rdf:predicate up:annotation ; rdf:object ?annotation217 . _:425092 a rdf:Statement ; up:attribution _:425008 ; rdf:subject ?pfs216 ; rdf:predicate up:annotation ; rdf:object ?annotation217 . } WHERE { #baseURI: http://purl.uniprot.org/unirule/MF_01225 #Rule MF_01225 Created by:coudert on:2002-09-13 Modified by:ecastro on:2023-06-01 { ?this up:organism ?thisOrganism ; rdfs:seeAlso signature:MF_01225_B . ?thisOrganism rdfs:subClassOf+ taxon:2 . } UNION { ?this up:organism ?thisOrganism ; rdfs:seeAlso signature:MF_01225_A . ?thisOrganism rdfs:subClassOf+ taxon:2157 . } BIND(URI(CONCAT(STR(?this), '#MF_01225a1')) AS ?annotation1) . BIND(URI(CONCAT(STR(?this), '#MF_01225a2')) AS ?annotation2) . BIND(URI(CONCAT(STR(?this), '#MF_01225a4')) AS ?annotation4) . BIND(URI(CONCAT(STR(?this), '#MF_01225a5')) AS ?annotation5) . BIND(URI(CONCAT(STR(?this), '#MF_01225a6')) AS ?annotation6) . OPTIONAL { ?this up:sequence ?thisSequence . ?thisSequence rdf:value ?thisSequenceValue . ?templateMotifMatch227 faldo:location ?templateMotifSequenceMatchRegionQ9V2G2228 ; edam:is_output_of ?templateMotifSequenceProfileAlignmentOperationQ9V2G2230 ; rdf:type edam:data_0869 ; rdf:value ?templateMotifCigarQ9V2G2MF_01225_A223 . ?templateMotifSequenceMatchRegionQ9V2G2228 faldo:begin ?templateMotifSequenceMatchBeginQ9V2G2229 . ?templateMotifSequenceMatchBeginQ9V2G2229 faldo:position ?templateMotifSequenceMatchBeginPositionQ9V2G2224 ; faldo:reference isoform:Q9V2G2-1 . ?templateMotifSequenceProfileAlignmentOperationQ9V2G2230 edam:has_input signature:MF_01225_A ; rdf:type edam:operation_0300 . ?targetMotifMatch231 faldo:location ?targetMotifMatchRegionMatch232 ; edam:is_output_of ?targetMotifSequenceAlignmentOperationMF_01225_A234 ; rdf:type edam:data_0869 ; rdf:value ?targetMotifMatchCigarQ9V2G2MF_01225_A225 . ?targetMotifMatchRegionMatch232 faldo:begin ?targetMotifMatchRegionMatchBeginMF_01225_A233 . ?targetMotifMatchRegionMatchBeginMF_01225_A233 faldo:position ?targetMotifMatchRegionMatchBeginPositionMF_01225_A226 ; faldo:reference ?thisSequence . ?targetMotifSequenceAlignmentOperationMF_01225_A234 edam:has_input signature:MF_01225_A ; rdf:type edam:operation_0300 . ?this up:organism ?thisOrganism . ?thisOrganism rdfs:subClassOf+ taxon:2157 . BIND(STRLEN(REPLACE(SUBSTR(?templateMotifCigarQ9V2G2MF_01225_A223, 1, (STRLEN(?templateMotifCigarQ9V2G2MF_01225_A223) - STRLEN(REPLACE(?templateMotifCigarQ9V2G2MF_01225_A223, CONCAT('^(?:-*[^-]){', STR(((255 - ?templateMotifSequenceMatchBeginPositionQ9V2G2224) + 1)), '}'), '')))), '[a-z]', '')) AS ?step1235) . BIND((STRLEN(SUBSTR(?targetMotifMatchCigarQ9V2G2MF_01225_A225, 1, (STRLEN(?targetMotifMatchCigarQ9V2G2MF_01225_A225) - STRLEN(REPLACE(?targetMotifMatchCigarQ9V2G2MF_01225_A225, CONCAT('^(?:[a-z]*(?:[A-Z]|-)){', STR(?step1235), '}'), ''))))) - STRLEN(REPLACE(SUBSTR(?targetMotifMatchCigarQ9V2G2MF_01225_A225, 1, (STRLEN(?targetMotifMatchCigarQ9V2G2MF_01225_A225) - STRLEN(REPLACE(?targetMotifMatchCigarQ9V2G2MF_01225_A225, CONCAT('^(?:[a-z]*(?:[A-Z]|-)){', STR(?step1235), '}'), '')))), '[^-]', ''))) AS ?step2236) . BIND(((?step2236 + ?targetMotifMatchRegionMatchBeginPositionMF_01225_A226) - 1) AS ?thisPositionOn18) . BIND(STRLEN(REPLACE(SUBSTR(?templateMotifCigarQ9V2G2MF_01225_A223, 1, (STRLEN(?templateMotifCigarQ9V2G2MF_01225_A223) - STRLEN(REPLACE(?templateMotifCigarQ9V2G2MF_01225_A223, CONCAT('^(?:-*[^-]){', STR(((257 - ?templateMotifSequenceMatchBeginPositionQ9V2G2224) + 1)), '}'), '')))), '[a-z]', '')) AS ?step1237) . BIND((STRLEN(SUBSTR(?targetMotifMatchCigarQ9V2G2MF_01225_A225, 1, (STRLEN(?targetMotifMatchCigarQ9V2G2MF_01225_A225) - STRLEN(REPLACE(?targetMotifMatchCigarQ9V2G2MF_01225_A225, CONCAT('^(?:[a-z]*(?:[A-Z]|-)){', STR(?step1237), '}'), ''))))) - STRLEN(REPLACE(SUBSTR(?targetMotifMatchCigarQ9V2G2MF_01225_A225, 1, (STRLEN(?targetMotifMatchCigarQ9V2G2MF_01225_A225) - STRLEN(REPLACE(?targetMotifMatchCigarQ9V2G2MF_01225_A225, CONCAT('^(?:[a-z]*(?:[A-Z]|-)){', STR(?step1237), '}'), '')))), '[^-]', ''))) AS ?step2238) . BIND(((?step2238 + ?targetMotifMatchRegionMatchBeginPositionMF_01225_A226) - 1) AS ?thisPositionOn19) . BIND(?this AS ?pfs1t239) . BIND(URI(CONCAT(STR(?thisSequence), '#position', STR(?thisPositionOn18))) AS ?pfsb15) . BIND(URI(CONCAT(STR(?thisSequence), '#position', STR(?thisPositionOn19))) AS ?pfse16) . FILTER (REGEX('R[ARNDCQEGHILKMFPSTWYVBZJUOX]R', SUBSTR(?thisSequenceValue, ?thisPositionOn18, (?thisPositionOn19 - ?thisPositionOn18)))) . BIND(URI(CONCAT(STR(?this), '#MF_01225a14')) AS ?annotation14) . BIND(?this AS ?pfs13) . } OPTIONAL { ?this up:sequence ?thisSequence . ?thisSequence rdf:value ?thisSequenceValue . ?templateMotifMatch244 faldo:location ?templateMotifSequenceMatchRegionQ9V2G2245 ; edam:is_output_of ?templateMotifSequenceProfileAlignmentOperationQ9V2G2247 ; rdf:type edam:data_0869 ; rdf:value ?templateMotifCigarQ9V2G2MF_01225_A240 . ?templateMotifSequenceMatchRegionQ9V2G2245 faldo:begin ?templateMotifSequenceMatchBeginQ9V2G2246 . ?templateMotifSequenceMatchBeginQ9V2G2246 faldo:position ?templateMotifSequenceMatchBeginPositionQ9V2G2241 ; faldo:reference isoform:Q9V2G2-1 . ?templateMotifSequenceProfileAlignmentOperationQ9V2G2247 edam:has_input signature:MF_01225_A ; rdf:type edam:operation_0300 . ?targetMotifMatch248 faldo:location ?targetMotifMatchRegionMatch249 ; edam:is_output_of ?targetMotifSequenceAlignmentOperationMF_01225_A251 ; rdf:type edam:data_0869 ; rdf:value ?targetMotifMatchCigarQ9V2G2MF_01225_A242 . ?targetMotifMatchRegionMatch249 faldo:begin ?targetMotifMatchRegionMatchBeginMF_01225_A250 . ?targetMotifMatchRegionMatchBeginMF_01225_A250 faldo:position ?targetMotifMatchRegionMatchBeginPositionMF_01225_A243 ; faldo:reference ?thisSequence . ?targetMotifSequenceAlignmentOperationMF_01225_A251 edam:has_input signature:MF_01225_A ; rdf:type edam:operation_0300 . ?this up:organism ?thisOrganism . ?thisOrganism rdfs:subClassOf+ taxon:2157 . BIND(STRLEN(REPLACE(SUBSTR(?templateMotifCigarQ9V2G2MF_01225_A240, 1, (STRLEN(?templateMotifCigarQ9V2G2MF_01225_A240) - STRLEN(REPLACE(?templateMotifCigarQ9V2G2MF_01225_A240, CONCAT('^(?:-*[^-]){', STR(((21 - ?templateMotifSequenceMatchBeginPositionQ9V2G2241) + 1)), '}'), '')))), '[a-z]', '')) AS ?step1252) . BIND((STRLEN(SUBSTR(?targetMotifMatchCigarQ9V2G2MF_01225_A242, 1, (STRLEN(?targetMotifMatchCigarQ9V2G2MF_01225_A242) - STRLEN(REPLACE(?targetMotifMatchCigarQ9V2G2MF_01225_A242, CONCAT('^(?:[a-z]*(?:[A-Z]|-)){', STR(?step1252), '}'), ''))))) - STRLEN(REPLACE(SUBSTR(?targetMotifMatchCigarQ9V2G2MF_01225_A242, 1, (STRLEN(?targetMotifMatchCigarQ9V2G2MF_01225_A242) - STRLEN(REPLACE(?targetMotifMatchCigarQ9V2G2MF_01225_A242, CONCAT('^(?:[a-z]*(?:[A-Z]|-)){', STR(?step1252), '}'), '')))), '[^-]', ''))) AS ?step2253) . BIND(((?step2253 + ?targetMotifMatchRegionMatchBeginPositionMF_01225_A243) - 1) AS ?thisPositionOn25) . BIND(?thisPositionOn25 AS ?thisPositionOn26) . BIND(?this AS ?pfs1t254) . BIND(URI(CONCAT(STR(?thisSequence), '#position', STR(?thisPositionOn25))) AS ?pfsb22) . BIND(URI(CONCAT(STR(?thisSequence), '#position', STR(?thisPositionOn26))) AS ?pfse23) . FILTER ((SUBSTR(?thisSequenceValue, ?thisPositionOn25, 1) = 'C')) . BIND(URI(CONCAT(STR(?this), '#MF_01225a21')) AS ?annotation21) . BIND(?this AS ?pfs20) . } OPTIONAL { ?this up:sequence ?thisSequence . ?thisSequence rdf:value ?thisSequenceValue . ?templateMotifMatch259 faldo:location ?templateMotifSequenceMatchRegionQ9V2G2260 ; edam:is_output_of ?templateMotifSequenceProfileAlignmentOperationQ9V2G2262 ; rdf:type edam:data_0869 ; rdf:value ?templateMotifCigarQ9V2G2MF_01225_A255 . ?templateMotifSequenceMatchRegionQ9V2G2260 faldo:begin ?templateMotifSequenceMatchBeginQ9V2G2261 . ?templateMotifSequenceMatchBeginQ9V2G2261 faldo:position ?templateMotifSequenceMatchBeginPositionQ9V2G2256 ; faldo:reference isoform:Q9V2G2-1 . ?templateMotifSequenceProfileAlignmentOperationQ9V2G2262 edam:has_input signature:MF_01225_A ; rdf:type edam:operation_0300 . ?targetMotifMatch263 faldo:location ?targetMotifMatchRegionMatch264 ; edam:is_output_of ?targetMotifSequenceAlignmentOperationMF_01225_A266 ; rdf:type edam:data_0869 ; rdf:value ?targetMotifMatchCigarQ9V2G2MF_01225_A257 . ?targetMotifMatchRegionMatch264 faldo:begin ?targetMotifMatchRegionMatchBeginMF_01225_A265 . ?targetMotifMatchRegionMatchBeginMF_01225_A265 faldo:position ?targetMotifMatchRegionMatchBeginPositionMF_01225_A258 ; faldo:reference ?thisSequence . ?targetMotifSequenceAlignmentOperationMF_01225_A266 edam:has_input signature:MF_01225_A ; rdf:type edam:operation_0300 . ?this up:organism ?thisOrganism . ?thisOrganism rdfs:subClassOf+ taxon:2157 . BIND(STRLEN(REPLACE(SUBSTR(?templateMotifCigarQ9V2G2MF_01225_A255, 1, (STRLEN(?templateMotifCigarQ9V2G2MF_01225_A255) - STRLEN(REPLACE(?templateMotifCigarQ9V2G2MF_01225_A255, CONCAT('^(?:-*[^-]){', STR(((25 - ?templateMotifSequenceMatchBeginPositionQ9V2G2256) + 1)), '}'), '')))), '[a-z]', '')) AS ?step1267) . BIND((STRLEN(SUBSTR(?targetMotifMatchCigarQ9V2G2MF_01225_A257, 1, (STRLEN(?targetMotifMatchCigarQ9V2G2MF_01225_A257) - STRLEN(REPLACE(?targetMotifMatchCigarQ9V2G2MF_01225_A257, CONCAT('^(?:[a-z]*(?:[A-Z]|-)){', STR(?step1267), '}'), ''))))) - STRLEN(REPLACE(SUBSTR(?targetMotifMatchCigarQ9V2G2MF_01225_A257, 1, (STRLEN(?targetMotifMatchCigarQ9V2G2MF_01225_A257) - STRLEN(REPLACE(?targetMotifMatchCigarQ9V2G2MF_01225_A257, CONCAT('^(?:[a-z]*(?:[A-Z]|-)){', STR(?step1267), '}'), '')))), '[^-]', ''))) AS ?step2268) . BIND(((?step2268 + ?targetMotifMatchRegionMatchBeginPositionMF_01225_A258) - 1) AS ?thisPositionOn32) . BIND(?thisPositionOn32 AS ?thisPositionOn33) . BIND(?this AS ?pfs1t269) . BIND(URI(CONCAT(STR(?thisSequence), '#position', STR(?thisPositionOn32))) AS ?pfsb29) . BIND(URI(CONCAT(STR(?thisSequence), '#position', STR(?thisPositionOn33))) AS ?pfse30) . FILTER ((SUBSTR(?thisSequenceValue, ?thisPositionOn32, 1) = 'C')) . BIND(URI(CONCAT(STR(?this), '#MF_01225a28')) AS ?annotation28) . BIND(?this AS ?pfs27) . } OPTIONAL { ?this up:sequence ?thisSequence . ?thisSequence rdf:value ?thisSequenceValue . ?templateMotifMatch274 faldo:location ?templateMotifSequenceMatchRegionQ9V2G2275 ; edam:is_output_of ?templateMotifSequenceProfileAlignmentOperationQ9V2G2277 ; rdf:type edam:data_0869 ; rdf:value ?templateMotifCigarQ9V2G2MF_01225_A270 . ?templateMotifSequenceMatchRegionQ9V2G2275 faldo:begin ?templateMotifSequenceMatchBeginQ9V2G2276 . ?templateMotifSequenceMatchBeginQ9V2G2276 faldo:position ?templateMotifSequenceMatchBeginPositionQ9V2G2271 ; faldo:reference isoform:Q9V2G2-1 . ?templateMotifSequenceProfileAlignmentOperationQ9V2G2277 edam:has_input signature:MF_01225_A ; rdf:type edam:operation_0300 . ?targetMotifMatch278 faldo:location ?targetMotifMatchRegionMatch279 ; edam:is_output_of ?targetMotifSequenceAlignmentOperationMF_01225_A281 ; rdf:type edam:data_0869 ; rdf:value ?targetMotifMatchCigarQ9V2G2MF_01225_A272 . ?targetMotifMatchRegionMatch279 faldo:begin ?targetMotifMatchRegionMatchBeginMF_01225_A280 . ?targetMotifMatchRegionMatchBeginMF_01225_A280 faldo:position ?targetMotifMatchRegionMatchBeginPositionMF_01225_A273 ; faldo:reference ?thisSequence . ?targetMotifSequenceAlignmentOperationMF_01225_A281 edam:has_input signature:MF_01225_A ; rdf:type edam:operation_0300 . ?this up:organism ?thisOrganism . ?thisOrganism rdfs:subClassOf+ taxon:2157 . BIND(STRLEN(REPLACE(SUBSTR(?templateMotifCigarQ9V2G2MF_01225_A270, 1, (STRLEN(?templateMotifCigarQ9V2G2MF_01225_A270) - STRLEN(REPLACE(?templateMotifCigarQ9V2G2MF_01225_A270, CONCAT('^(?:-*[^-]){', STR(((28 - ?templateMotifSequenceMatchBeginPositionQ9V2G2271) + 1)), '}'), '')))), '[a-z]', '')) AS ?step1282) . BIND((STRLEN(SUBSTR(?targetMotifMatchCigarQ9V2G2MF_01225_A272, 1, (STRLEN(?targetMotifMatchCigarQ9V2G2MF_01225_A272) - STRLEN(REPLACE(?targetMotifMatchCigarQ9V2G2MF_01225_A272, CONCAT('^(?:[a-z]*(?:[A-Z]|-)){', STR(?step1282), '}'), ''))))) - STRLEN(REPLACE(SUBSTR(?targetMotifMatchCigarQ9V2G2MF_01225_A272, 1, (STRLEN(?targetMotifMatchCigarQ9V2G2MF_01225_A272) - STRLEN(REPLACE(?targetMotifMatchCigarQ9V2G2MF_01225_A272, CONCAT('^(?:[a-z]*(?:[A-Z]|-)){', STR(?step1282), '}'), '')))), '[^-]', ''))) AS ?step2283) . BIND(((?step2283 + ?targetMotifMatchRegionMatchBeginPositionMF_01225_A273) - 1) AS ?thisPositionOn39) . BIND(?thisPositionOn39 AS ?thisPositionOn40) . BIND(?this AS ?pfs1t284) . BIND(URI(CONCAT(STR(?thisSequence), '#position', STR(?thisPositionOn39))) AS ?pfsb36) . BIND(URI(CONCAT(STR(?thisSequence), '#position', STR(?thisPositionOn40))) AS ?pfse37) . FILTER ((SUBSTR(?thisSequenceValue, ?thisPositionOn39, 1) = 'C')) . BIND(URI(CONCAT(STR(?this), '#MF_01225a35')) AS ?annotation35) . BIND(?this AS ?pfs34) . } OPTIONAL { ?this up:sequence ?thisSequence . ?thisSequence rdf:value ?thisSequenceValue . ?templateMotifMatch289 faldo:location ?templateMotifSequenceMatchRegionQ9V2G2290 ; edam:is_output_of ?templateMotifSequenceProfileAlignmentOperationQ9V2G2292 ; rdf:type edam:data_0869 ; rdf:value ?templateMotifCigarQ9V2G2MF_01225_A285 . ?templateMotifSequenceMatchRegionQ9V2G2290 faldo:begin ?templateMotifSequenceMatchBeginQ9V2G2291 . ?templateMotifSequenceMatchBeginQ9V2G2291 faldo:position ?templateMotifSequenceMatchBeginPositionQ9V2G2286 ; faldo:reference isoform:Q9V2G2-1 . ?templateMotifSequenceProfileAlignmentOperationQ9V2G2292 edam:has_input signature:MF_01225_A ; rdf:type edam:operation_0300 . ?targetMotifMatch293 faldo:location ?targetMotifMatchRegionMatch294 ; edam:is_output_of ?targetMotifSequenceAlignmentOperationMF_01225_A296 ; rdf:type edam:data_0869 ; rdf:value ?targetMotifMatchCigarQ9V2G2MF_01225_A287 . ?targetMotifMatchRegionMatch294 faldo:begin ?targetMotifMatchRegionMatchBeginMF_01225_A295 . ?targetMotifMatchRegionMatchBeginMF_01225_A295 faldo:position ?targetMotifMatchRegionMatchBeginPositionMF_01225_A288 ; faldo:reference ?thisSequence . ?targetMotifSequenceAlignmentOperationMF_01225_A296 edam:has_input signature:MF_01225_A ; rdf:type edam:operation_0300 . ?this up:organism ?thisOrganism . ?thisOrganism rdfs:subClassOf+ taxon:2157 . BIND(STRLEN(REPLACE(SUBSTR(?templateMotifCigarQ9V2G2MF_01225_A285, 1, (STRLEN(?templateMotifCigarQ9V2G2MF_01225_A285) - STRLEN(REPLACE(?templateMotifCigarQ9V2G2MF_01225_A285, CONCAT('^(?:-*[^-]){', STR(((250 - ?templateMotifSequenceMatchBeginPositionQ9V2G2286) + 1)), '}'), '')))), '[a-z]', '')) AS ?step1297) . BIND((STRLEN(SUBSTR(?targetMotifMatchCigarQ9V2G2MF_01225_A287, 1, (STRLEN(?targetMotifMatchCigarQ9V2G2MF_01225_A287) - STRLEN(REPLACE(?targetMotifMatchCigarQ9V2G2MF_01225_A287, CONCAT('^(?:[a-z]*(?:[A-Z]|-)){', STR(?step1297), '}'), ''))))) - STRLEN(REPLACE(SUBSTR(?targetMotifMatchCigarQ9V2G2MF_01225_A287, 1, (STRLEN(?targetMotifMatchCigarQ9V2G2MF_01225_A287) - STRLEN(REPLACE(?targetMotifMatchCigarQ9V2G2MF_01225_A287, CONCAT('^(?:[a-z]*(?:[A-Z]|-)){', STR(?step1297), '}'), '')))), '[^-]', ''))) AS ?step2298) . BIND(((?step2298 + ?targetMotifMatchRegionMatchBeginPositionMF_01225_A288) - 1) AS ?thisPositionOn46) . BIND(?thisPositionOn46 AS ?thisPositionOn47) . BIND(?this AS ?pfs1t299) . BIND(URI(CONCAT(STR(?thisSequence), '#position', STR(?thisPositionOn46))) AS ?pfsb43) . BIND(URI(CONCAT(STR(?thisSequence), '#position', STR(?thisPositionOn47))) AS ?pfse44) . FILTER ((SUBSTR(?thisSequenceValue, ?thisPositionOn46, 1) = 'C')) . BIND(URI(CONCAT(STR(?this), '#MF_01225a42')) AS ?annotation42) . BIND(?this AS ?pfs41) . } OPTIONAL { ?this up:sequence ?thisSequence . ?thisSequence rdf:value ?thisSequenceValue . ?templateMotifMatch304 faldo:location ?templateMotifSequenceMatchRegionQ9V2G2305 ; edam:is_output_of ?templateMotifSequenceProfileAlignmentOperationQ9V2G2307 ; rdf:type edam:data_0869 ; rdf:value ?templateMotifCigarQ9V2G2MF_01225_A300 . ?templateMotifSequenceMatchRegionQ9V2G2305 faldo:begin ?templateMotifSequenceMatchBeginQ9V2G2306 . ?templateMotifSequenceMatchBeginQ9V2G2306 faldo:position ?templateMotifSequenceMatchBeginPositionQ9V2G2301 ; faldo:reference isoform:Q9V2G2-1 . ?templateMotifSequenceProfileAlignmentOperationQ9V2G2307 edam:has_input signature:MF_01225_A ; rdf:type edam:operation_0300 . ?targetMotifMatch308 faldo:location ?targetMotifMatchRegionMatch309 ; edam:is_output_of ?targetMotifSequenceAlignmentOperationMF_01225_A311 ; rdf:type edam:data_0869 ; rdf:value ?targetMotifMatchCigarQ9V2G2MF_01225_A302 . ?targetMotifMatchRegionMatch309 faldo:begin ?targetMotifMatchRegionMatchBeginMF_01225_A310 . ?targetMotifMatchRegionMatchBeginMF_01225_A310 faldo:position ?targetMotifMatchRegionMatchBeginPositionMF_01225_A303 ; faldo:reference ?thisSequence . ?targetMotifSequenceAlignmentOperationMF_01225_A311 edam:has_input signature:MF_01225_A ; rdf:type edam:operation_0300 . ?this up:organism ?thisOrganism . ?thisOrganism rdfs:subClassOf+ taxon:2157 . BIND(STRLEN(REPLACE(SUBSTR(?templateMotifCigarQ9V2G2MF_01225_A300, 1, (STRLEN(?templateMotifCigarQ9V2G2MF_01225_A300) - STRLEN(REPLACE(?templateMotifCigarQ9V2G2MF_01225_A300, CONCAT('^(?:-*[^-]){', STR(((253 - ?templateMotifSequenceMatchBeginPositionQ9V2G2301) + 1)), '}'), '')))), '[a-z]', '')) AS ?step1312) . BIND((STRLEN(SUBSTR(?targetMotifMatchCigarQ9V2G2MF_01225_A302, 1, (STRLEN(?targetMotifMatchCigarQ9V2G2MF_01225_A302) - STRLEN(REPLACE(?targetMotifMatchCigarQ9V2G2MF_01225_A302, CONCAT('^(?:[a-z]*(?:[A-Z]|-)){', STR(?step1312), '}'), ''))))) - STRLEN(REPLACE(SUBSTR(?targetMotifMatchCigarQ9V2G2MF_01225_A302, 1, (STRLEN(?targetMotifMatchCigarQ9V2G2MF_01225_A302) - STRLEN(REPLACE(?targetMotifMatchCigarQ9V2G2MF_01225_A302, CONCAT('^(?:[a-z]*(?:[A-Z]|-)){', STR(?step1312), '}'), '')))), '[^-]', ''))) AS ?step2313) . BIND(((?step2313 + ?targetMotifMatchRegionMatchBeginPositionMF_01225_A303) - 1) AS ?thisPositionOn53) . BIND(?thisPositionOn53 AS ?thisPositionOn54) . BIND(?this AS ?pfs1t314) . BIND(URI(CONCAT(STR(?thisSequence), '#position', STR(?thisPositionOn53))) AS ?pfsb50) . BIND(URI(CONCAT(STR(?thisSequence), '#position', STR(?thisPositionOn54))) AS ?pfse51) . FILTER ((SUBSTR(?thisSequenceValue, ?thisPositionOn53, 1) = 'C')) . BIND(URI(CONCAT(STR(?this), '#MF_01225a49')) AS ?annotation49) . BIND(?this AS ?pfs48) . } OPTIONAL { ?this up:sequence ?thisSequence . ?thisSequence rdf:value ?thisSequenceValue . ?templateMotifMatch319 faldo:location ?templateMotifSequenceMatchRegionQ9V2G2320 ; edam:is_output_of ?templateMotifSequenceProfileAlignmentOperationQ9V2G2322 ; rdf:type edam:data_0869 ; rdf:value ?templateMotifCigarQ9V2G2MF_01225_A315 . ?templateMotifSequenceMatchRegionQ9V2G2320 faldo:begin ?templateMotifSequenceMatchBeginQ9V2G2321 . ?templateMotifSequenceMatchBeginQ9V2G2321 faldo:position ?templateMotifSequenceMatchBeginPositionQ9V2G2316 ; faldo:reference isoform:Q9V2G2-1 . ?templateMotifSequenceProfileAlignmentOperationQ9V2G2322 edam:has_input signature:MF_01225_A ; rdf:type edam:operation_0300 . ?targetMotifMatch323 faldo:location ?targetMotifMatchRegionMatch324 ; edam:is_output_of ?targetMotifSequenceAlignmentOperationMF_01225_A326 ; rdf:type edam:data_0869 ; rdf:value ?targetMotifMatchCigarQ9V2G2MF_01225_A317 . ?targetMotifMatchRegionMatch324 faldo:begin ?targetMotifMatchRegionMatchBeginMF_01225_A325 . ?targetMotifMatchRegionMatchBeginMF_01225_A325 faldo:position ?targetMotifMatchRegionMatchBeginPositionMF_01225_A318 ; faldo:reference ?thisSequence . ?targetMotifSequenceAlignmentOperationMF_01225_A326 edam:has_input signature:MF_01225_A ; rdf:type edam:operation_0300 . ?this up:organism ?thisOrganism . ?thisOrganism rdfs:subClassOf+ taxon:2157 . BIND(STRLEN(REPLACE(SUBSTR(?templateMotifCigarQ9V2G2MF_01225_A315, 1, (STRLEN(?templateMotifCigarQ9V2G2MF_01225_A315) - STRLEN(REPLACE(?templateMotifCigarQ9V2G2MF_01225_A315, CONCAT('^(?:-*[^-]){', STR(((267 - ?templateMotifSequenceMatchBeginPositionQ9V2G2316) + 1)), '}'), '')))), '[a-z]', '')) AS ?step1327) . BIND((STRLEN(SUBSTR(?targetMotifMatchCigarQ9V2G2MF_01225_A317, 1, (STRLEN(?targetMotifMatchCigarQ9V2G2MF_01225_A317) - STRLEN(REPLACE(?targetMotifMatchCigarQ9V2G2MF_01225_A317, CONCAT('^(?:[a-z]*(?:[A-Z]|-)){', STR(?step1327), '}'), ''))))) - STRLEN(REPLACE(SUBSTR(?targetMotifMatchCigarQ9V2G2MF_01225_A317, 1, (STRLEN(?targetMotifMatchCigarQ9V2G2MF_01225_A317) - STRLEN(REPLACE(?targetMotifMatchCigarQ9V2G2MF_01225_A317, CONCAT('^(?:[a-z]*(?:[A-Z]|-)){', STR(?step1327), '}'), '')))), '[^-]', ''))) AS ?step2328) . BIND(((?step2328 + ?targetMotifMatchRegionMatchBeginPositionMF_01225_A318) - 1) AS ?thisPositionOn60) . BIND(?thisPositionOn60 AS ?thisPositionOn61) . BIND(?this AS ?pfs1t329) . BIND(URI(CONCAT(STR(?thisSequence), '#position', STR(?thisPositionOn60))) AS ?pfsb57) . BIND(URI(CONCAT(STR(?thisSequence), '#position', STR(?thisPositionOn61))) AS ?pfse58) . FILTER ((SUBSTR(?thisSequenceValue, ?thisPositionOn60, 1) = 'C')) . BIND(URI(CONCAT(STR(?this), '#MF_01225a56')) AS ?annotation56) . BIND(?this AS ?pfs55) . } OPTIONAL { ?this up:sequence ?thisSequence . ?thisSequence rdf:value ?thisSequenceValue . ?templateMotifMatch334 faldo:location ?templateMotifSequenceMatchRegionQ9V2G2335 ; edam:is_output_of ?templateMotifSequenceProfileAlignmentOperationQ9V2G2337 ; rdf:type edam:data_0869 ; rdf:value ?templateMotifCigarQ9V2G2MF_01225_A330 . ?templateMotifSequenceMatchRegionQ9V2G2335 faldo:begin ?templateMotifSequenceMatchBeginQ9V2G2336 . ?templateMotifSequenceMatchBeginQ9V2G2336 faldo:position ?templateMotifSequenceMatchBeginPositionQ9V2G2331 ; faldo:reference isoform:Q9V2G2-1 . ?templateMotifSequenceProfileAlignmentOperationQ9V2G2337 edam:has_input signature:MF_01225_A ; rdf:type edam:operation_0300 . ?targetMotifMatch338 faldo:location ?targetMotifMatchRegionMatch339 ; edam:is_output_of ?targetMotifSequenceAlignmentOperationMF_01225_A341 ; rdf:type edam:data_0869 ; rdf:value ?targetMotifMatchCigarQ9V2G2MF_01225_A332 . ?targetMotifMatchRegionMatch339 faldo:begin ?targetMotifMatchRegionMatchBeginMF_01225_A340 . ?targetMotifMatchRegionMatchBeginMF_01225_A340 faldo:position ?targetMotifMatchRegionMatchBeginPositionMF_01225_A333 ; faldo:reference ?thisSequence . ?targetMotifSequenceAlignmentOperationMF_01225_A341 edam:has_input signature:MF_01225_A ; rdf:type edam:operation_0300 . ?this up:organism ?thisOrganism . ?thisOrganism rdfs:subClassOf+ taxon:2157 . BIND(STRLEN(REPLACE(SUBSTR(?templateMotifCigarQ9V2G2MF_01225_A330, 1, (STRLEN(?templateMotifCigarQ9V2G2MF_01225_A330) - STRLEN(REPLACE(?templateMotifCigarQ9V2G2MF_01225_A330, CONCAT('^(?:-*[^-]){', STR(((14 - ?templateMotifSequenceMatchBeginPositionQ9V2G2331) + 1)), '}'), '')))), '[a-z]', '')) AS ?step1342) . BIND((STRLEN(SUBSTR(?targetMotifMatchCigarQ9V2G2MF_01225_A332, 1, (STRLEN(?targetMotifMatchCigarQ9V2G2MF_01225_A332) - STRLEN(REPLACE(?targetMotifMatchCigarQ9V2G2MF_01225_A332, CONCAT('^(?:[a-z]*(?:[A-Z]|-)){', STR(?step1342), '}'), ''))))) - STRLEN(REPLACE(SUBSTR(?targetMotifMatchCigarQ9V2G2MF_01225_A332, 1, (STRLEN(?targetMotifMatchCigarQ9V2G2MF_01225_A332) - STRLEN(REPLACE(?targetMotifMatchCigarQ9V2G2MF_01225_A332, CONCAT('^(?:[a-z]*(?:[A-Z]|-)){', STR(?step1342), '}'), '')))), '[^-]', ''))) AS ?step2343) . BIND(((?step2343 + ?targetMotifMatchRegionMatchBeginPositionMF_01225_A333) - 1) AS ?thisPositionOn67) . BIND(?thisPositionOn67 AS ?thisPositionOn68) . BIND(?this AS ?pfs1t344) . BIND(URI(CONCAT(STR(?thisSequence), '#position', STR(?thisPositionOn67))) AS ?pfsb64) . BIND(URI(CONCAT(STR(?thisSequence), '#position', STR(?thisPositionOn68))) AS ?pfse65) . FILTER ((SUBSTR(?thisSequenceValue, ?thisPositionOn67, 1) = 'R')) . BIND(URI(CONCAT(STR(?this), '#MF_01225a63')) AS ?annotation63) . BIND(?this AS ?pfs62) . } OPTIONAL { ?this up:sequence ?thisSequence . ?thisSequence rdf:value ?thisSequenceValue . ?templateMotifMatch349 faldo:location ?templateMotifSequenceMatchRegionQ9V2G2350 ; edam:is_output_of ?templateMotifSequenceProfileAlignmentOperationQ9V2G2352 ; rdf:type edam:data_0869 ; rdf:value ?templateMotifCigarQ9V2G2MF_01225_A345 . ?templateMotifSequenceMatchRegionQ9V2G2350 faldo:begin ?templateMotifSequenceMatchBeginQ9V2G2351 . ?templateMotifSequenceMatchBeginQ9V2G2351 faldo:position ?templateMotifSequenceMatchBeginPositionQ9V2G2346 ; faldo:reference isoform:Q9V2G2-1 . ?templateMotifSequenceProfileAlignmentOperationQ9V2G2352 edam:has_input signature:MF_01225_A ; rdf:type edam:operation_0300 . ?targetMotifMatch353 faldo:location ?targetMotifMatchRegionMatch354 ; edam:is_output_of ?targetMotifSequenceAlignmentOperationMF_01225_A356 ; rdf:type edam:data_0869 ; rdf:value ?targetMotifMatchCigarQ9V2G2MF_01225_A347 . ?targetMotifMatchRegionMatch354 faldo:begin ?targetMotifMatchRegionMatchBeginMF_01225_A355 . ?targetMotifMatchRegionMatchBeginMF_01225_A355 faldo:position ?targetMotifMatchRegionMatchBeginPositionMF_01225_A348 ; faldo:reference ?thisSequence . ?targetMotifSequenceAlignmentOperationMF_01225_A356 edam:has_input signature:MF_01225_A ; rdf:type edam:operation_0300 . ?this up:organism ?thisOrganism . ?thisOrganism rdfs:subClassOf+ taxon:2157 . BIND(STRLEN(REPLACE(SUBSTR(?templateMotifCigarQ9V2G2MF_01225_A345, 1, (STRLEN(?templateMotifCigarQ9V2G2MF_01225_A345) - STRLEN(REPLACE(?templateMotifCigarQ9V2G2MF_01225_A345, CONCAT('^(?:-*[^-]){', STR(((27 - ?templateMotifSequenceMatchBeginPositionQ9V2G2346) + 1)), '}'), '')))), '[a-z]', '')) AS ?step1357) . BIND((STRLEN(SUBSTR(?targetMotifMatchCigarQ9V2G2MF_01225_A347, 1, (STRLEN(?targetMotifMatchCigarQ9V2G2MF_01225_A347) - STRLEN(REPLACE(?targetMotifMatchCigarQ9V2G2MF_01225_A347, CONCAT('^(?:[a-z]*(?:[A-Z]|-)){', STR(?step1357), '}'), ''))))) - STRLEN(REPLACE(SUBSTR(?targetMotifMatchCigarQ9V2G2MF_01225_A347, 1, (STRLEN(?targetMotifMatchCigarQ9V2G2MF_01225_A347) - STRLEN(REPLACE(?targetMotifMatchCigarQ9V2G2MF_01225_A347, CONCAT('^(?:[a-z]*(?:[A-Z]|-)){', STR(?step1357), '}'), '')))), '[^-]', ''))) AS ?step2358) . BIND(((?step2358 + ?targetMotifMatchRegionMatchBeginPositionMF_01225_A348) - 1) AS ?thisPositionOn74) . BIND(?thisPositionOn74 AS ?thisPositionOn75) . BIND(?this AS ?pfs1t359) . BIND(URI(CONCAT(STR(?thisSequence), '#position', STR(?thisPositionOn74))) AS ?pfsb71) . BIND(URI(CONCAT(STR(?thisSequence), '#position', STR(?thisPositionOn75))) AS ?pfse72) . FILTER ((SUBSTR(?thisSequenceValue, ?thisPositionOn74, 1) = 'Y')) . BIND(URI(CONCAT(STR(?this), '#MF_01225a70')) AS ?annotation70) . BIND(?this AS ?pfs69) . } OPTIONAL { ?this up:sequence ?thisSequence . ?thisSequence rdf:value ?thisSequenceValue . ?templateMotifMatch364 faldo:location ?templateMotifSequenceMatchRegionQ9V2G2365 ; edam:is_output_of ?templateMotifSequenceProfileAlignmentOperationQ9V2G2367 ; rdf:type edam:data_0869 ; rdf:value ?templateMotifCigarQ9V2G2MF_01225_A360 . ?templateMotifSequenceMatchRegionQ9V2G2365 faldo:begin ?templateMotifSequenceMatchBeginQ9V2G2366 . ?templateMotifSequenceMatchBeginQ9V2G2366 faldo:position ?templateMotifSequenceMatchBeginPositionQ9V2G2361 ; faldo:reference isoform:Q9V2G2-1 . ?templateMotifSequenceProfileAlignmentOperationQ9V2G2367 edam:has_input signature:MF_01225_A ; rdf:type edam:operation_0300 . ?targetMotifMatch368 faldo:location ?targetMotifMatchRegionMatch369 ; edam:is_output_of ?targetMotifSequenceAlignmentOperationMF_01225_A371 ; rdf:type edam:data_0869 ; rdf:value ?targetMotifMatchCigarQ9V2G2MF_01225_A362 . ?targetMotifMatchRegionMatch369 faldo:begin ?targetMotifMatchRegionMatchBeginMF_01225_A370 . ?targetMotifMatchRegionMatchBeginMF_01225_A370 faldo:position ?targetMotifMatchRegionMatchBeginPositionMF_01225_A363 ; faldo:reference ?thisSequence . ?targetMotifSequenceAlignmentOperationMF_01225_A371 edam:has_input signature:MF_01225_A ; rdf:type edam:operation_0300 . ?this up:organism ?thisOrganism . ?thisOrganism rdfs:subClassOf+ taxon:2157 . BIND(STRLEN(REPLACE(SUBSTR(?templateMotifCigarQ9V2G2MF_01225_A360, 1, (STRLEN(?templateMotifCigarQ9V2G2MF_01225_A360) - STRLEN(REPLACE(?templateMotifCigarQ9V2G2MF_01225_A360, CONCAT('^(?:-*[^-]){', STR(((61 - ?templateMotifSequenceMatchBeginPositionQ9V2G2361) + 1)), '}'), '')))), '[a-z]', '')) AS ?step1372) . BIND((STRLEN(SUBSTR(?targetMotifMatchCigarQ9V2G2MF_01225_A362, 1, (STRLEN(?targetMotifMatchCigarQ9V2G2MF_01225_A362) - STRLEN(REPLACE(?targetMotifMatchCigarQ9V2G2MF_01225_A362, CONCAT('^(?:[a-z]*(?:[A-Z]|-)){', STR(?step1372), '}'), ''))))) - STRLEN(REPLACE(SUBSTR(?targetMotifMatchCigarQ9V2G2MF_01225_A362, 1, (STRLEN(?targetMotifMatchCigarQ9V2G2MF_01225_A362) - STRLEN(REPLACE(?targetMotifMatchCigarQ9V2G2MF_01225_A362, CONCAT('^(?:[a-z]*(?:[A-Z]|-)){', STR(?step1372), '}'), '')))), '[^-]', ''))) AS ?step2373) . BIND(((?step2373 + ?targetMotifMatchRegionMatchBeginPositionMF_01225_A363) - 1) AS ?thisPositionOn81) . BIND(?thisPositionOn81 AS ?thisPositionOn82) . BIND(?this AS ?pfs1t374) . BIND(URI(CONCAT(STR(?thisSequence), '#position', STR(?thisPositionOn81))) AS ?pfsb78) . BIND(URI(CONCAT(STR(?thisSequence), '#position', STR(?thisPositionOn82))) AS ?pfse79) . FILTER (REGEX('[KR]', SUBSTR(?thisSequenceValue, ?thisPositionOn81, 1))) . BIND(URI(CONCAT(STR(?this), '#MF_01225a77')) AS ?annotation77) . BIND(?this AS ?pfs76) . } OPTIONAL { ?this up:sequence ?thisSequence . ?thisSequence rdf:value ?thisSequenceValue . ?templateMotifMatch379 faldo:location ?templateMotifSequenceMatchRegionQ9V2G2380 ; edam:is_output_of ?templateMotifSequenceProfileAlignmentOperationQ9V2G2382 ; rdf:type edam:data_0869 ; rdf:value ?templateMotifCigarQ9V2G2MF_01225_A375 . ?templateMotifSequenceMatchRegionQ9V2G2380 faldo:begin ?templateMotifSequenceMatchBeginQ9V2G2381 . ?templateMotifSequenceMatchBeginQ9V2G2381 faldo:position ?templateMotifSequenceMatchBeginPositionQ9V2G2376 ; faldo:reference isoform:Q9V2G2-1 . ?templateMotifSequenceProfileAlignmentOperationQ9V2G2382 edam:has_input signature:MF_01225_A ; rdf:type edam:operation_0300 . ?targetMotifMatch383 faldo:location ?targetMotifMatchRegionMatch384 ; edam:is_output_of ?targetMotifSequenceAlignmentOperationMF_01225_A386 ; rdf:type edam:data_0869 ; rdf:value ?targetMotifMatchCigarQ9V2G2MF_01225_A377 . ?targetMotifMatchRegionMatch384 faldo:begin ?targetMotifMatchRegionMatchBeginMF_01225_A385 . ?targetMotifMatchRegionMatchBeginMF_01225_A385 faldo:position ?targetMotifMatchRegionMatchBeginPositionMF_01225_A378 ; faldo:reference ?thisSequence . ?targetMotifSequenceAlignmentOperationMF_01225_A386 edam:has_input signature:MF_01225_A ; rdf:type edam:operation_0300 . ?this up:organism ?thisOrganism . ?thisOrganism rdfs:subClassOf+ taxon:2157 . BIND(STRLEN(REPLACE(SUBSTR(?templateMotifCigarQ9V2G2MF_01225_A375, 1, (STRLEN(?templateMotifCigarQ9V2G2MF_01225_A375) - STRLEN(REPLACE(?templateMotifCigarQ9V2G2MF_01225_A375, CONCAT('^(?:-*[^-]){', STR(((65 - ?templateMotifSequenceMatchBeginPositionQ9V2G2376) + 1)), '}'), '')))), '[a-z]', '')) AS ?step1387) . BIND((STRLEN(SUBSTR(?targetMotifMatchCigarQ9V2G2MF_01225_A377, 1, (STRLEN(?targetMotifMatchCigarQ9V2G2MF_01225_A377) - STRLEN(REPLACE(?targetMotifMatchCigarQ9V2G2MF_01225_A377, CONCAT('^(?:[a-z]*(?:[A-Z]|-)){', STR(?step1387), '}'), ''))))) - STRLEN(REPLACE(SUBSTR(?targetMotifMatchCigarQ9V2G2MF_01225_A377, 1, (STRLEN(?targetMotifMatchCigarQ9V2G2MF_01225_A377) - STRLEN(REPLACE(?targetMotifMatchCigarQ9V2G2MF_01225_A377, CONCAT('^(?:[a-z]*(?:[A-Z]|-)){', STR(?step1387), '}'), '')))), '[^-]', ''))) AS ?step2388) . BIND(((?step2388 + ?targetMotifMatchRegionMatchBeginPositionMF_01225_A378) - 1) AS ?thisPositionOn88) . BIND(?thisPositionOn88 AS ?thisPositionOn89) . BIND(?this AS ?pfs1t389) . BIND(URI(CONCAT(STR(?thisSequence), '#position', STR(?thisPositionOn88))) AS ?pfsb85) . BIND(URI(CONCAT(STR(?thisSequence), '#position', STR(?thisPositionOn89))) AS ?pfse86) . FILTER ((SUBSTR(?thisSequenceValue, ?thisPositionOn88, 1) = 'G')) . BIND(URI(CONCAT(STR(?this), '#MF_01225a84')) AS ?annotation84) . BIND(?this AS ?pfs83) . } OPTIONAL { ?this up:sequence ?thisSequence . ?thisSequence rdf:value ?thisSequenceValue . ?templateMotifMatch394 faldo:location ?templateMotifSequenceMatchRegionQ9V2G2395 ; edam:is_output_of ?templateMotifSequenceProfileAlignmentOperationQ9V2G2397 ; rdf:type edam:data_0869 ; rdf:value ?templateMotifCigarQ9V2G2MF_01225_A390 . ?templateMotifSequenceMatchRegionQ9V2G2395 faldo:begin ?templateMotifSequenceMatchBeginQ9V2G2396 . ?templateMotifSequenceMatchBeginQ9V2G2396 faldo:position ?templateMotifSequenceMatchBeginPositionQ9V2G2391 ; faldo:reference isoform:Q9V2G2-1 . ?templateMotifSequenceProfileAlignmentOperationQ9V2G2397 edam:has_input signature:MF_01225_A ; rdf:type edam:operation_0300 . ?targetMotifMatch398 faldo:location ?targetMotifMatchRegionMatch399 ; edam:is_output_of ?targetMotifSequenceAlignmentOperationMF_01225_A401 ; rdf:type edam:data_0869 ; rdf:value ?targetMotifMatchCigarQ9V2G2MF_01225_A392 . ?targetMotifMatchRegionMatch399 faldo:begin ?targetMotifMatchRegionMatchBeginMF_01225_A400 . ?targetMotifMatchRegionMatchBeginMF_01225_A400 faldo:position ?targetMotifMatchRegionMatchBeginPositionMF_01225_A393 ; faldo:reference ?thisSequence . ?targetMotifSequenceAlignmentOperationMF_01225_A401 edam:has_input signature:MF_01225_A ; rdf:type edam:operation_0300 . ?this up:organism ?thisOrganism . ?thisOrganism rdfs:subClassOf+ taxon:2157 . BIND(STRLEN(REPLACE(SUBSTR(?templateMotifCigarQ9V2G2MF_01225_A390, 1, (STRLEN(?templateMotifCigarQ9V2G2MF_01225_A390) - STRLEN(REPLACE(?templateMotifCigarQ9V2G2MF_01225_A390, CONCAT('^(?:-*[^-]){', STR(((90 - ?templateMotifSequenceMatchBeginPositionQ9V2G2391) + 1)), '}'), '')))), '[a-z]', '')) AS ?step1402) . BIND((STRLEN(SUBSTR(?targetMotifMatchCigarQ9V2G2MF_01225_A392, 1, (STRLEN(?targetMotifMatchCigarQ9V2G2MF_01225_A392) - STRLEN(REPLACE(?targetMotifMatchCigarQ9V2G2MF_01225_A392, CONCAT('^(?:[a-z]*(?:[A-Z]|-)){', STR(?step1402), '}'), ''))))) - STRLEN(REPLACE(SUBSTR(?targetMotifMatchCigarQ9V2G2MF_01225_A392, 1, (STRLEN(?targetMotifMatchCigarQ9V2G2MF_01225_A392) - STRLEN(REPLACE(?targetMotifMatchCigarQ9V2G2MF_01225_A392, CONCAT('^(?:[a-z]*(?:[A-Z]|-)){', STR(?step1402), '}'), '')))), '[^-]', ''))) AS ?step2403) . BIND(((?step2403 + ?targetMotifMatchRegionMatchBeginPositionMF_01225_A393) - 1) AS ?thisPositionOn95) . BIND(?thisPositionOn95 AS ?thisPositionOn96) . BIND(?this AS ?pfs1t404) . BIND(URI(CONCAT(STR(?thisSequence), '#position', STR(?thisPositionOn95))) AS ?pfsb92) . BIND(URI(CONCAT(STR(?thisSequence), '#position', STR(?thisPositionOn96))) AS ?pfse93) . FILTER ((SUBSTR(?thisSequenceValue, ?thisPositionOn95, 1) = 'T')) . BIND(URI(CONCAT(STR(?this), '#MF_01225a91')) AS ?annotation91) . BIND(?this AS ?pfs90) . } OPTIONAL { ?this up:sequence ?thisSequence . ?thisSequence rdf:value ?thisSequenceValue . ?templateMotifMatch409 faldo:location ?templateMotifSequenceMatchRegionQ9V2G2410 ; edam:is_output_of ?templateMotifSequenceProfileAlignmentOperationQ9V2G2412 ; rdf:type edam:data_0869 ; rdf:value ?templateMotifCigarQ9V2G2MF_01225_A405 . ?templateMotifSequenceMatchRegionQ9V2G2410 faldo:begin ?templateMotifSequenceMatchBeginQ9V2G2411 . ?templateMotifSequenceMatchBeginQ9V2G2411 faldo:position ?templateMotifSequenceMatchBeginPositionQ9V2G2406 ; faldo:reference isoform:Q9V2G2-1 . ?templateMotifSequenceProfileAlignmentOperationQ9V2G2412 edam:has_input signature:MF_01225_A ; rdf:type edam:operation_0300 . ?targetMotifMatch413 faldo:location ?targetMotifMatchRegionMatch414 ; edam:is_output_of ?targetMotifSequenceAlignmentOperationMF_01225_A416 ; rdf:type edam:data_0869 ; rdf:value ?targetMotifMatchCigarQ9V2G2MF_01225_A407 . ?targetMotifMatchRegionMatch414 faldo:begin ?targetMotifMatchRegionMatchBeginMF_01225_A415 . ?targetMotifMatchRegionMatchBeginMF_01225_A415 faldo:position ?targetMotifMatchRegionMatchBeginPositionMF_01225_A408 ; faldo:reference ?thisSequence . ?targetMotifSequenceAlignmentOperationMF_01225_A416 edam:has_input signature:MF_01225_A ; rdf:type edam:operation_0300 . ?this up:organism ?thisOrganism . ?thisOrganism rdfs:subClassOf+ taxon:2157 . BIND(STRLEN(REPLACE(SUBSTR(?templateMotifCigarQ9V2G2MF_01225_A405, 1, (STRLEN(?templateMotifCigarQ9V2G2MF_01225_A405) - STRLEN(REPLACE(?templateMotifCigarQ9V2G2MF_01225_A405, CONCAT('^(?:-*[^-]){', STR(((114 - ?templateMotifSequenceMatchBeginPositionQ9V2G2406) + 1)), '}'), '')))), '[a-z]', '')) AS ?step1417) . BIND((STRLEN(SUBSTR(?targetMotifMatchCigarQ9V2G2MF_01225_A407, 1, (STRLEN(?targetMotifMatchCigarQ9V2G2MF_01225_A407) - STRLEN(REPLACE(?targetMotifMatchCigarQ9V2G2MF_01225_A407, CONCAT('^(?:[a-z]*(?:[A-Z]|-)){', STR(?step1417), '}'), ''))))) - STRLEN(REPLACE(SUBSTR(?targetMotifMatchCigarQ9V2G2MF_01225_A407, 1, (STRLEN(?targetMotifMatchCigarQ9V2G2MF_01225_A407) - STRLEN(REPLACE(?targetMotifMatchCigarQ9V2G2MF_01225_A407, CONCAT('^(?:[a-z]*(?:[A-Z]|-)){', STR(?step1417), '}'), '')))), '[^-]', ''))) AS ?step2418) . BIND(((?step2418 + ?targetMotifMatchRegionMatchBeginPositionMF_01225_A408) - 1) AS ?thisPositionOn102) . BIND(?thisPositionOn102 AS ?thisPositionOn103) . BIND(?this AS ?pfs1t419) . BIND(URI(CONCAT(STR(?thisSequence), '#position', STR(?thisPositionOn102))) AS ?pfsb99) . BIND(URI(CONCAT(STR(?thisSequence), '#position', STR(?thisPositionOn103))) AS ?pfse100) . FILTER ((SUBSTR(?thisSequenceValue, ?thisPositionOn102, 1) = 'S')) . BIND(URI(CONCAT(STR(?this), '#MF_01225a98')) AS ?annotation98) . BIND(?this AS ?pfs97) . } OPTIONAL { ?this up:sequence ?thisSequence . ?thisSequence rdf:value ?thisSequenceValue . ?templateMotifMatch424 faldo:location ?templateMotifSequenceMatchRegionQ9V2G2425 ; edam:is_output_of ?templateMotifSequenceProfileAlignmentOperationQ9V2G2427 ; rdf:type edam:data_0869 ; rdf:value ?templateMotifCigarQ9V2G2MF_01225_A420 . ?templateMotifSequenceMatchRegionQ9V2G2425 faldo:begin ?templateMotifSequenceMatchBeginQ9V2G2426 . ?templateMotifSequenceMatchBeginQ9V2G2426 faldo:position ?templateMotifSequenceMatchBeginPositionQ9V2G2421 ; faldo:reference isoform:Q9V2G2-1 . ?templateMotifSequenceProfileAlignmentOperationQ9V2G2427 edam:has_input signature:MF_01225_A ; rdf:type edam:operation_0300 . ?targetMotifMatch428 faldo:location ?targetMotifMatchRegionMatch429 ; edam:is_output_of ?targetMotifSequenceAlignmentOperationMF_01225_A431 ; rdf:type edam:data_0869 ; rdf:value ?targetMotifMatchCigarQ9V2G2MF_01225_A422 . ?targetMotifMatchRegionMatch429 faldo:begin ?targetMotifMatchRegionMatchBeginMF_01225_A430 . ?targetMotifMatchRegionMatchBeginMF_01225_A430 faldo:position ?targetMotifMatchRegionMatchBeginPositionMF_01225_A423 ; faldo:reference ?thisSequence . ?targetMotifSequenceAlignmentOperationMF_01225_A431 edam:has_input signature:MF_01225_A ; rdf:type edam:operation_0300 . ?this up:organism ?thisOrganism . ?thisOrganism rdfs:subClassOf+ taxon:2157 . BIND(STRLEN(REPLACE(SUBSTR(?templateMotifCigarQ9V2G2MF_01225_A420, 1, (STRLEN(?templateMotifCigarQ9V2G2MF_01225_A420) - STRLEN(REPLACE(?templateMotifCigarQ9V2G2MF_01225_A420, CONCAT('^(?:-*[^-]){', STR(((150 - ?templateMotifSequenceMatchBeginPositionQ9V2G2421) + 1)), '}'), '')))), '[a-z]', '')) AS ?step1432) . BIND((STRLEN(SUBSTR(?targetMotifMatchCigarQ9V2G2MF_01225_A422, 1, (STRLEN(?targetMotifMatchCigarQ9V2G2MF_01225_A422) - STRLEN(REPLACE(?targetMotifMatchCigarQ9V2G2MF_01225_A422, CONCAT('^(?:[a-z]*(?:[A-Z]|-)){', STR(?step1432), '}'), ''))))) - STRLEN(REPLACE(SUBSTR(?targetMotifMatchCigarQ9V2G2MF_01225_A422, 1, (STRLEN(?targetMotifMatchCigarQ9V2G2MF_01225_A422) - STRLEN(REPLACE(?targetMotifMatchCigarQ9V2G2MF_01225_A422, CONCAT('^(?:[a-z]*(?:[A-Z]|-)){', STR(?step1432), '}'), '')))), '[^-]', ''))) AS ?step2433) . BIND(((?step2433 + ?targetMotifMatchRegionMatchBeginPositionMF_01225_A423) - 1) AS ?thisPositionOn109) . BIND(?thisPositionOn109 AS ?thisPositionOn110) . BIND(?this AS ?pfs1t434) . BIND(URI(CONCAT(STR(?thisSequence), '#position', STR(?thisPositionOn109))) AS ?pfsb106) . BIND(URI(CONCAT(STR(?thisSequence), '#position', STR(?thisPositionOn110))) AS ?pfse107) . FILTER ((SUBSTR(?thisSequenceValue, ?thisPositionOn109, 1) = 'K')) . BIND(URI(CONCAT(STR(?this), '#MF_01225a105')) AS ?annotation105) . BIND(?this AS ?pfs104) . } OPTIONAL { ?this up:sequence ?thisSequence . ?thisSequence rdf:value ?thisSequenceValue . ?templateMotifMatch439 faldo:location ?templateMotifSequenceMatchRegionQ9V2G2440 ; edam:is_output_of ?templateMotifSequenceProfileAlignmentOperationQ9V2G2442 ; rdf:type edam:data_0869 ; rdf:value ?templateMotifCigarQ9V2G2MF_01225_A435 . ?templateMotifSequenceMatchRegionQ9V2G2440 faldo:begin ?templateMotifSequenceMatchBeginQ9V2G2441 . ?templateMotifSequenceMatchBeginQ9V2G2441 faldo:position ?templateMotifSequenceMatchBeginPositionQ9V2G2436 ; faldo:reference isoform:Q9V2G2-1 . ?templateMotifSequenceProfileAlignmentOperationQ9V2G2442 edam:has_input signature:MF_01225_A ; rdf:type edam:operation_0300 . ?targetMotifMatch443 faldo:location ?targetMotifMatchRegionMatch444 ; edam:is_output_of ?targetMotifSequenceAlignmentOperationMF_01225_A446 ; rdf:type edam:data_0869 ; rdf:value ?targetMotifMatchCigarQ9V2G2MF_01225_A437 . ?targetMotifMatchRegionMatch444 faldo:begin ?targetMotifMatchRegionMatchBeginMF_01225_A445 . ?targetMotifMatchRegionMatchBeginMF_01225_A445 faldo:position ?targetMotifMatchRegionMatchBeginPositionMF_01225_A438 ; faldo:reference ?thisSequence . ?targetMotifSequenceAlignmentOperationMF_01225_A446 edam:has_input signature:MF_01225_A ; rdf:type edam:operation_0300 . ?this up:organism ?thisOrganism . ?thisOrganism rdfs:subClassOf+ taxon:2157 . BIND(STRLEN(REPLACE(SUBSTR(?templateMotifCigarQ9V2G2MF_01225_A435, 1, (STRLEN(?templateMotifCigarQ9V2G2MF_01225_A435) - STRLEN(REPLACE(?templateMotifCigarQ9V2G2MF_01225_A435, CONCAT('^(?:-*[^-]){', STR(((189 - ?templateMotifSequenceMatchBeginPositionQ9V2G2436) + 1)), '}'), '')))), '[a-z]', '')) AS ?step1447) . BIND((STRLEN(SUBSTR(?targetMotifMatchCigarQ9V2G2MF_01225_A437, 1, (STRLEN(?targetMotifMatchCigarQ9V2G2MF_01225_A437) - STRLEN(REPLACE(?targetMotifMatchCigarQ9V2G2MF_01225_A437, CONCAT('^(?:[a-z]*(?:[A-Z]|-)){', STR(?step1447), '}'), ''))))) - STRLEN(REPLACE(SUBSTR(?targetMotifMatchCigarQ9V2G2MF_01225_A437, 1, (STRLEN(?targetMotifMatchCigarQ9V2G2MF_01225_A437) - STRLEN(REPLACE(?targetMotifMatchCigarQ9V2G2MF_01225_A437, CONCAT('^(?:[a-z]*(?:[A-Z]|-)){', STR(?step1447), '}'), '')))), '[^-]', ''))) AS ?step2448) . BIND(((?step2448 + ?targetMotifMatchRegionMatchBeginPositionMF_01225_A438) - 1) AS ?thisPositionOn116) . BIND(?thisPositionOn116 AS ?thisPositionOn117) . BIND(?this AS ?pfs1t449) . BIND(URI(CONCAT(STR(?thisSequence), '#position', STR(?thisPositionOn116))) AS ?pfsb113) . BIND(URI(CONCAT(STR(?thisSequence), '#position', STR(?thisPositionOn117))) AS ?pfse114) . FILTER ((SUBSTR(?thisSequenceValue, ?thisPositionOn116, 1) = 'M')) . BIND(URI(CONCAT(STR(?this), '#MF_01225a112')) AS ?annotation112) . BIND(?this AS ?pfs111) . } OPTIONAL { ?this up:sequence ?thisSequence . ?thisSequence rdf:value ?thisSequenceValue . ?templateMotifMatch454 faldo:location ?templateMotifSequenceMatchRegionP69848455 ; edam:is_output_of ?templateMotifSequenceProfileAlignmentOperationP69848457 ; rdf:type edam:data_0869 ; rdf:value ?templateMotifCigarP69848MF_01225_B450 . ?templateMotifSequenceMatchRegionP69848455 faldo:begin ?templateMotifSequenceMatchBeginP69848456 . ?templateMotifSequenceMatchBeginP69848456 faldo:position ?templateMotifSequenceMatchBeginPositionP69848451 ; faldo:reference isoform:P69848-1 . ?templateMotifSequenceProfileAlignmentOperationP69848457 edam:has_input signature:MF_01225_B ; rdf:type edam:operation_0300 . ?targetMotifMatch458 faldo:location ?targetMotifMatchRegionMatch459 ; edam:is_output_of ?targetMotifSequenceAlignmentOperationMF_01225_B461 ; rdf:type edam:data_0869 ; rdf:value ?targetMotifMatchCigarP69848MF_01225_B452 . ?targetMotifMatchRegionMatch459 faldo:begin ?targetMotifMatchRegionMatchBeginMF_01225_B460 . ?targetMotifMatchRegionMatchBeginMF_01225_B460 faldo:position ?targetMotifMatchRegionMatchBeginPositionMF_01225_B453 ; faldo:reference ?thisSequence . ?targetMotifSequenceAlignmentOperationMF_01225_B461 edam:has_input signature:MF_01225_B ; rdf:type edam:operation_0300 . ?this up:organism ?thisOrganism . ?thisOrganism rdfs:subClassOf+ taxon:2 . BIND(STRLEN(REPLACE(SUBSTR(?templateMotifCigarP69848MF_01225_B450, 1, (STRLEN(?templateMotifCigarP69848MF_01225_B450) - STRLEN(REPLACE(?templateMotifCigarP69848MF_01225_B450, CONCAT('^(?:-*[^-]){', STR(((266 - ?templateMotifSequenceMatchBeginPositionP69848451) + 1)), '}'), '')))), '[a-z]', '')) AS ?step1462) . BIND((STRLEN(SUBSTR(?targetMotifMatchCigarP69848MF_01225_B452, 1, (STRLEN(?targetMotifMatchCigarP69848MF_01225_B452) - STRLEN(REPLACE(?targetMotifMatchCigarP69848MF_01225_B452, CONCAT('^(?:[a-z]*(?:[A-Z]|-)){', STR(?step1462), '}'), ''))))) - STRLEN(REPLACE(SUBSTR(?targetMotifMatchCigarP69848MF_01225_B452, 1, (STRLEN(?targetMotifMatchCigarP69848MF_01225_B452) - STRLEN(REPLACE(?targetMotifMatchCigarP69848MF_01225_B452, CONCAT('^(?:[a-z]*(?:[A-Z]|-)){', STR(?step1462), '}'), '')))), '[^-]', ''))) AS ?step2463) . BIND(((?step2463 + ?targetMotifMatchRegionMatchBeginPositionMF_01225_B453) - 1) AS ?thisPositionOn123) . BIND(STRLEN(REPLACE(SUBSTR(?templateMotifCigarP69848MF_01225_B450, 1, (STRLEN(?templateMotifCigarP69848MF_01225_B450) - STRLEN(REPLACE(?templateMotifCigarP69848MF_01225_B450, CONCAT('^(?:-*[^-]){', STR(((268 - ?templateMotifSequenceMatchBeginPositionP69848451) + 1)), '}'), '')))), '[a-z]', '')) AS ?step1464) . BIND((STRLEN(SUBSTR(?targetMotifMatchCigarP69848MF_01225_B452, 1, (STRLEN(?targetMotifMatchCigarP69848MF_01225_B452) - STRLEN(REPLACE(?targetMotifMatchCigarP69848MF_01225_B452, CONCAT('^(?:[a-z]*(?:[A-Z]|-)){', STR(?step1464), '}'), ''))))) - STRLEN(REPLACE(SUBSTR(?targetMotifMatchCigarP69848MF_01225_B452, 1, (STRLEN(?targetMotifMatchCigarP69848MF_01225_B452) - STRLEN(REPLACE(?targetMotifMatchCigarP69848MF_01225_B452, CONCAT('^(?:[a-z]*(?:[A-Z]|-)){', STR(?step1464), '}'), '')))), '[^-]', ''))) AS ?step2465) . BIND(((?step2465 + ?targetMotifMatchRegionMatchBeginPositionMF_01225_B453) - 1) AS ?thisPositionOn124) . BIND(?this AS ?pfs2t466) . BIND(URI(CONCAT(STR(?thisSequence), '#position', STR(?thisPositionOn123))) AS ?pfsb120) . BIND(URI(CONCAT(STR(?thisSequence), '#position', STR(?thisPositionOn124))) AS ?pfse121) . FILTER (REGEX('[RK][ARNDCQEGHILKMFPSTWYVBZJUOX]R', SUBSTR(?thisSequenceValue, ?thisPositionOn123, (?thisPositionOn124 - ?thisPositionOn123)))) . BIND(URI(CONCAT(STR(?this), '#MF_01225a119')) AS ?annotation119) . BIND(?this AS ?pfs118) . } OPTIONAL { ?this up:sequence ?thisSequence . ?thisSequence rdf:value ?thisSequenceValue . ?templateMotifMatch471 faldo:location ?templateMotifSequenceMatchRegionP69848472 ; edam:is_output_of ?templateMotifSequenceProfileAlignmentOperationP69848474 ; rdf:type edam:data_0869 ; rdf:value ?templateMotifCigarP69848MF_01225_B467 . ?templateMotifSequenceMatchRegionP69848472 faldo:begin ?templateMotifSequenceMatchBeginP69848473 . ?templateMotifSequenceMatchBeginP69848473 faldo:position ?templateMotifSequenceMatchBeginPositionP69848468 ; faldo:reference isoform:P69848-1 . ?templateMotifSequenceProfileAlignmentOperationP69848474 edam:has_input signature:MF_01225_B ; rdf:type edam:operation_0300 . ?targetMotifMatch475 faldo:location ?targetMotifMatchRegionMatch476 ; edam:is_output_of ?targetMotifSequenceAlignmentOperationMF_01225_B478 ; rdf:type edam:data_0869 ; rdf:value ?targetMotifMatchCigarP69848MF_01225_B469 . ?targetMotifMatchRegionMatch476 faldo:begin ?targetMotifMatchRegionMatchBeginMF_01225_B477 . ?targetMotifMatchRegionMatchBeginMF_01225_B477 faldo:position ?targetMotifMatchRegionMatchBeginPositionMF_01225_B470 ; faldo:reference ?thisSequence . ?targetMotifSequenceAlignmentOperationMF_01225_B478 edam:has_input signature:MF_01225_B ; rdf:type edam:operation_0300 . ?this up:organism ?thisOrganism . ?thisOrganism rdfs:subClassOf+ taxon:2 . BIND(STRLEN(REPLACE(SUBSTR(?templateMotifCigarP69848MF_01225_B467, 1, (STRLEN(?templateMotifCigarP69848MF_01225_B467) - STRLEN(REPLACE(?templateMotifCigarP69848MF_01225_B467, CONCAT('^(?:-*[^-]){', STR(((24 - ?templateMotifSequenceMatchBeginPositionP69848468) + 1)), '}'), '')))), '[a-z]', '')) AS ?step1479) . BIND((STRLEN(SUBSTR(?targetMotifMatchCigarP69848MF_01225_B469, 1, (STRLEN(?targetMotifMatchCigarP69848MF_01225_B469) - STRLEN(REPLACE(?targetMotifMatchCigarP69848MF_01225_B469, CONCAT('^(?:[a-z]*(?:[A-Z]|-)){', STR(?step1479), '}'), ''))))) - STRLEN(REPLACE(SUBSTR(?targetMotifMatchCigarP69848MF_01225_B469, 1, (STRLEN(?targetMotifMatchCigarP69848MF_01225_B469) - STRLEN(REPLACE(?targetMotifMatchCigarP69848MF_01225_B469, CONCAT('^(?:[a-z]*(?:[A-Z]|-)){', STR(?step1479), '}'), '')))), '[^-]', ''))) AS ?step2480) . BIND(((?step2480 + ?targetMotifMatchRegionMatchBeginPositionMF_01225_B470) - 1) AS ?thisPositionOn130) . BIND(?thisPositionOn130 AS ?thisPositionOn131) . BIND(?this AS ?pfs2t481) . BIND(URI(CONCAT(STR(?thisSequence), '#position', STR(?thisPositionOn130))) AS ?pfsb127) . BIND(URI(CONCAT(STR(?thisSequence), '#position', STR(?thisPositionOn131))) AS ?pfse128) . FILTER ((SUBSTR(?thisSequenceValue, ?thisPositionOn130, 1) = 'C')) . BIND(URI(CONCAT(STR(?this), '#MF_01225a126')) AS ?annotation126) . BIND(?this AS ?pfs125) . } OPTIONAL { ?this up:sequence ?thisSequence . ?thisSequence rdf:value ?thisSequenceValue . ?templateMotifMatch486 faldo:location ?templateMotifSequenceMatchRegionP69848487 ; edam:is_output_of ?templateMotifSequenceProfileAlignmentOperationP69848489 ; rdf:type edam:data_0869 ; rdf:value ?templateMotifCigarP69848MF_01225_B482 . ?templateMotifSequenceMatchRegionP69848487 faldo:begin ?templateMotifSequenceMatchBeginP69848488 . ?templateMotifSequenceMatchBeginP69848488 faldo:position ?templateMotifSequenceMatchBeginPositionP69848483 ; faldo:reference isoform:P69848-1 . ?templateMotifSequenceProfileAlignmentOperationP69848489 edam:has_input signature:MF_01225_B ; rdf:type edam:operation_0300 . ?targetMotifMatch490 faldo:location ?targetMotifMatchRegionMatch491 ; edam:is_output_of ?targetMotifSequenceAlignmentOperationMF_01225_B493 ; rdf:type edam:data_0869 ; rdf:value ?targetMotifMatchCigarP69848MF_01225_B484 . ?targetMotifMatchRegionMatch491 faldo:begin ?targetMotifMatchRegionMatchBeginMF_01225_B492 . ?targetMotifMatchRegionMatchBeginMF_01225_B492 faldo:position ?targetMotifMatchRegionMatchBeginPositionMF_01225_B485 ; faldo:reference ?thisSequence . ?targetMotifSequenceAlignmentOperationMF_01225_B493 edam:has_input signature:MF_01225_B ; rdf:type edam:operation_0300 . ?this up:organism ?thisOrganism . ?thisOrganism rdfs:subClassOf+ taxon:2 . BIND(STRLEN(REPLACE(SUBSTR(?templateMotifCigarP69848MF_01225_B482, 1, (STRLEN(?templateMotifCigarP69848MF_01225_B482) - STRLEN(REPLACE(?templateMotifCigarP69848MF_01225_B482, CONCAT('^(?:-*[^-]){', STR(((28 - ?templateMotifSequenceMatchBeginPositionP69848483) + 1)), '}'), '')))), '[a-z]', '')) AS ?step1494) . BIND((STRLEN(SUBSTR(?targetMotifMatchCigarP69848MF_01225_B484, 1, (STRLEN(?targetMotifMatchCigarP69848MF_01225_B484) - STRLEN(REPLACE(?targetMotifMatchCigarP69848MF_01225_B484, CONCAT('^(?:[a-z]*(?:[A-Z]|-)){', STR(?step1494), '}'), ''))))) - STRLEN(REPLACE(SUBSTR(?targetMotifMatchCigarP69848MF_01225_B484, 1, (STRLEN(?targetMotifMatchCigarP69848MF_01225_B484) - STRLEN(REPLACE(?targetMotifMatchCigarP69848MF_01225_B484, CONCAT('^(?:[a-z]*(?:[A-Z]|-)){', STR(?step1494), '}'), '')))), '[^-]', ''))) AS ?step2495) . BIND(((?step2495 + ?targetMotifMatchRegionMatchBeginPositionMF_01225_B485) - 1) AS ?thisPositionOn137) . BIND(?thisPositionOn137 AS ?thisPositionOn138) . BIND(?this AS ?pfs2t496) . BIND(URI(CONCAT(STR(?thisSequence), '#position', STR(?thisPositionOn137))) AS ?pfsb134) . BIND(URI(CONCAT(STR(?thisSequence), '#position', STR(?thisPositionOn138))) AS ?pfse135) . FILTER ((SUBSTR(?thisSequenceValue, ?thisPositionOn137, 1) = 'C')) . BIND(URI(CONCAT(STR(?this), '#MF_01225a133')) AS ?annotation133) . BIND(?this AS ?pfs132) . } OPTIONAL { ?this up:sequence ?thisSequence . ?thisSequence rdf:value ?thisSequenceValue . ?templateMotifMatch501 faldo:location ?templateMotifSequenceMatchRegionP69848502 ; edam:is_output_of ?templateMotifSequenceProfileAlignmentOperationP69848504 ; rdf:type edam:data_0869 ; rdf:value ?templateMotifCigarP69848MF_01225_B497 . ?templateMotifSequenceMatchRegionP69848502 faldo:begin ?templateMotifSequenceMatchBeginP69848503 . ?templateMotifSequenceMatchBeginP69848503 faldo:position ?templateMotifSequenceMatchBeginPositionP69848498 ; faldo:reference isoform:P69848-1 . ?templateMotifSequenceProfileAlignmentOperationP69848504 edam:has_input signature:MF_01225_B ; rdf:type edam:operation_0300 . ?targetMotifMatch505 faldo:location ?targetMotifMatchRegionMatch506 ; edam:is_output_of ?targetMotifSequenceAlignmentOperationMF_01225_B508 ; rdf:type edam:data_0869 ; rdf:value ?targetMotifMatchCigarP69848MF_01225_B499 . ?targetMotifMatchRegionMatch506 faldo:begin ?targetMotifMatchRegionMatchBeginMF_01225_B507 . ?targetMotifMatchRegionMatchBeginMF_01225_B507 faldo:position ?targetMotifMatchRegionMatchBeginPositionMF_01225_B500 ; faldo:reference ?thisSequence . ?targetMotifSequenceAlignmentOperationMF_01225_B508 edam:has_input signature:MF_01225_B ; rdf:type edam:operation_0300 . ?this up:organism ?thisOrganism . ?thisOrganism rdfs:subClassOf+ taxon:2 . BIND(STRLEN(REPLACE(SUBSTR(?templateMotifCigarP69848MF_01225_B497, 1, (STRLEN(?templateMotifCigarP69848MF_01225_B497) - STRLEN(REPLACE(?templateMotifCigarP69848MF_01225_B497, CONCAT('^(?:-*[^-]){', STR(((31 - ?templateMotifSequenceMatchBeginPositionP69848498) + 1)), '}'), '')))), '[a-z]', '')) AS ?step1509) . BIND((STRLEN(SUBSTR(?targetMotifMatchCigarP69848MF_01225_B499, 1, (STRLEN(?targetMotifMatchCigarP69848MF_01225_B499) - STRLEN(REPLACE(?targetMotifMatchCigarP69848MF_01225_B499, CONCAT('^(?:[a-z]*(?:[A-Z]|-)){', STR(?step1509), '}'), ''))))) - STRLEN(REPLACE(SUBSTR(?targetMotifMatchCigarP69848MF_01225_B499, 1, (STRLEN(?targetMotifMatchCigarP69848MF_01225_B499) - STRLEN(REPLACE(?targetMotifMatchCigarP69848MF_01225_B499, CONCAT('^(?:[a-z]*(?:[A-Z]|-)){', STR(?step1509), '}'), '')))), '[^-]', ''))) AS ?step2510) . BIND(((?step2510 + ?targetMotifMatchRegionMatchBeginPositionMF_01225_B500) - 1) AS ?thisPositionOn144) . BIND(?thisPositionOn144 AS ?thisPositionOn145) . BIND(?this AS ?pfs2t511) . BIND(URI(CONCAT(STR(?thisSequence), '#position', STR(?thisPositionOn144))) AS ?pfsb141) . BIND(URI(CONCAT(STR(?thisSequence), '#position', STR(?thisPositionOn145))) AS ?pfse142) . FILTER ((SUBSTR(?thisSequenceValue, ?thisPositionOn144, 1) = 'C')) . BIND(URI(CONCAT(STR(?this), '#MF_01225a140')) AS ?annotation140) . BIND(?this AS ?pfs139) . } OPTIONAL { ?this up:sequence ?thisSequence . ?thisSequence rdf:value ?thisSequenceValue . ?templateMotifMatch516 faldo:location ?templateMotifSequenceMatchRegionP69848517 ; edam:is_output_of ?templateMotifSequenceProfileAlignmentOperationP69848519 ; rdf:type edam:data_0869 ; rdf:value ?templateMotifCigarP69848MF_01225_B512 . ?templateMotifSequenceMatchRegionP69848517 faldo:begin ?templateMotifSequenceMatchBeginP69848518 . ?templateMotifSequenceMatchBeginP69848518 faldo:position ?templateMotifSequenceMatchBeginPositionP69848513 ; faldo:reference isoform:P69848-1 . ?templateMotifSequenceProfileAlignmentOperationP69848519 edam:has_input signature:MF_01225_B ; rdf:type edam:operation_0300 . ?targetMotifMatch520 faldo:location ?targetMotifMatchRegionMatch521 ; edam:is_output_of ?targetMotifSequenceAlignmentOperationMF_01225_B523 ; rdf:type edam:data_0869 ; rdf:value ?targetMotifMatchCigarP69848MF_01225_B514 . ?targetMotifMatchRegionMatch521 faldo:begin ?targetMotifMatchRegionMatchBeginMF_01225_B522 . ?targetMotifMatchRegionMatchBeginMF_01225_B522 faldo:position ?targetMotifMatchRegionMatchBeginPositionMF_01225_B515 ; faldo:reference ?thisSequence . ?targetMotifSequenceAlignmentOperationMF_01225_B523 edam:has_input signature:MF_01225_B ; rdf:type edam:operation_0300 . ?this up:organism ?thisOrganism . ?thisOrganism rdfs:subClassOf+ taxon:2 . BIND(STRLEN(REPLACE(SUBSTR(?templateMotifCigarP69848MF_01225_B512, 1, (STRLEN(?templateMotifCigarP69848MF_01225_B512) - STRLEN(REPLACE(?templateMotifCigarP69848MF_01225_B512, CONCAT('^(?:-*[^-]){', STR(((261 - ?templateMotifSequenceMatchBeginPositionP69848513) + 1)), '}'), '')))), '[a-z]', '')) AS ?step1524) . BIND((STRLEN(SUBSTR(?targetMotifMatchCigarP69848MF_01225_B514, 1, (STRLEN(?targetMotifMatchCigarP69848MF_01225_B514) - STRLEN(REPLACE(?targetMotifMatchCigarP69848MF_01225_B514, CONCAT('^(?:[a-z]*(?:[A-Z]|-)){', STR(?step1524), '}'), ''))))) - STRLEN(REPLACE(SUBSTR(?targetMotifMatchCigarP69848MF_01225_B514, 1, (STRLEN(?targetMotifMatchCigarP69848MF_01225_B514) - STRLEN(REPLACE(?targetMotifMatchCigarP69848MF_01225_B514, CONCAT('^(?:[a-z]*(?:[A-Z]|-)){', STR(?step1524), '}'), '')))), '[^-]', ''))) AS ?step2525) . BIND(((?step2525 + ?targetMotifMatchRegionMatchBeginPositionMF_01225_B515) - 1) AS ?thisPositionOn151) . BIND(?thisPositionOn151 AS ?thisPositionOn152) . BIND(?this AS ?pfs2t526) . BIND(URI(CONCAT(STR(?thisSequence), '#position', STR(?thisPositionOn151))) AS ?pfsb148) . BIND(URI(CONCAT(STR(?thisSequence), '#position', STR(?thisPositionOn152))) AS ?pfse149) . FILTER ((SUBSTR(?thisSequenceValue, ?thisPositionOn151, 1) = 'C')) . BIND(URI(CONCAT(STR(?this), '#MF_01225a147')) AS ?annotation147) . BIND(?this AS ?pfs146) . } OPTIONAL { ?this up:sequence ?thisSequence . ?thisSequence rdf:value ?thisSequenceValue . ?templateMotifMatch531 faldo:location ?templateMotifSequenceMatchRegionP69848532 ; edam:is_output_of ?templateMotifSequenceProfileAlignmentOperationP69848534 ; rdf:type edam:data_0869 ; rdf:value ?templateMotifCigarP69848MF_01225_B527 . ?templateMotifSequenceMatchRegionP69848532 faldo:begin ?templateMotifSequenceMatchBeginP69848533 . ?templateMotifSequenceMatchBeginP69848533 faldo:position ?templateMotifSequenceMatchBeginPositionP69848528 ; faldo:reference isoform:P69848-1 . ?templateMotifSequenceProfileAlignmentOperationP69848534 edam:has_input signature:MF_01225_B ; rdf:type edam:operation_0300 . ?targetMotifMatch535 faldo:location ?targetMotifMatchRegionMatch536 ; edam:is_output_of ?targetMotifSequenceAlignmentOperationMF_01225_B538 ; rdf:type edam:data_0869 ; rdf:value ?targetMotifMatchCigarP69848MF_01225_B529 . ?targetMotifMatchRegionMatch536 faldo:begin ?targetMotifMatchRegionMatchBeginMF_01225_B537 . ?targetMotifMatchRegionMatchBeginMF_01225_B537 faldo:position ?targetMotifMatchRegionMatchBeginPositionMF_01225_B530 ; faldo:reference ?thisSequence . ?targetMotifSequenceAlignmentOperationMF_01225_B538 edam:has_input signature:MF_01225_B ; rdf:type edam:operation_0300 . ?this up:organism ?thisOrganism . ?thisOrganism rdfs:subClassOf+ taxon:2 . BIND(STRLEN(REPLACE(SUBSTR(?templateMotifCigarP69848MF_01225_B527, 1, (STRLEN(?templateMotifCigarP69848MF_01225_B527) - STRLEN(REPLACE(?templateMotifCigarP69848MF_01225_B527, CONCAT('^(?:-*[^-]){', STR(((264 - ?templateMotifSequenceMatchBeginPositionP69848528) + 1)), '}'), '')))), '[a-z]', '')) AS ?step1539) . BIND((STRLEN(SUBSTR(?targetMotifMatchCigarP69848MF_01225_B529, 1, (STRLEN(?targetMotifMatchCigarP69848MF_01225_B529) - STRLEN(REPLACE(?targetMotifMatchCigarP69848MF_01225_B529, CONCAT('^(?:[a-z]*(?:[A-Z]|-)){', STR(?step1539), '}'), ''))))) - STRLEN(REPLACE(SUBSTR(?targetMotifMatchCigarP69848MF_01225_B529, 1, (STRLEN(?targetMotifMatchCigarP69848MF_01225_B529) - STRLEN(REPLACE(?targetMotifMatchCigarP69848MF_01225_B529, CONCAT('^(?:[a-z]*(?:[A-Z]|-)){', STR(?step1539), '}'), '')))), '[^-]', ''))) AS ?step2540) . BIND(((?step2540 + ?targetMotifMatchRegionMatchBeginPositionMF_01225_B530) - 1) AS ?thisPositionOn158) . BIND(?thisPositionOn158 AS ?thisPositionOn159) . BIND(?this AS ?pfs2t541) . BIND(URI(CONCAT(STR(?thisSequence), '#position', STR(?thisPositionOn158))) AS ?pfsb155) . BIND(URI(CONCAT(STR(?thisSequence), '#position', STR(?thisPositionOn159))) AS ?pfse156) . FILTER ((SUBSTR(?thisSequenceValue, ?thisPositionOn158, 1) = 'C')) . BIND(URI(CONCAT(STR(?this), '#MF_01225a154')) AS ?annotation154) . BIND(?this AS ?pfs153) . } OPTIONAL { ?this up:sequence ?thisSequence . ?thisSequence rdf:value ?thisSequenceValue . ?templateMotifMatch546 faldo:location ?templateMotifSequenceMatchRegionP69848547 ; edam:is_output_of ?templateMotifSequenceProfileAlignmentOperationP69848549 ; rdf:type edam:data_0869 ; rdf:value ?templateMotifCigarP69848MF_01225_B542 . ?templateMotifSequenceMatchRegionP69848547 faldo:begin ?templateMotifSequenceMatchBeginP69848548 . ?templateMotifSequenceMatchBeginP69848548 faldo:position ?templateMotifSequenceMatchBeginPositionP69848543 ; faldo:reference isoform:P69848-1 . ?templateMotifSequenceProfileAlignmentOperationP69848549 edam:has_input signature:MF_01225_B ; rdf:type edam:operation_0300 . ?targetMotifMatch550 faldo:location ?targetMotifMatchRegionMatch551 ; edam:is_output_of ?targetMotifSequenceAlignmentOperationMF_01225_B553 ; rdf:type edam:data_0869 ; rdf:value ?targetMotifMatchCigarP69848MF_01225_B544 . ?targetMotifMatchRegionMatch551 faldo:begin ?targetMotifMatchRegionMatchBeginMF_01225_B552 . ?targetMotifMatchRegionMatchBeginMF_01225_B552 faldo:position ?targetMotifMatchRegionMatchBeginPositionMF_01225_B545 ; faldo:reference ?thisSequence . ?targetMotifSequenceAlignmentOperationMF_01225_B553 edam:has_input signature:MF_01225_B ; rdf:type edam:operation_0300 . ?this up:organism ?thisOrganism . ?thisOrganism rdfs:subClassOf+ taxon:2 . BIND(STRLEN(REPLACE(SUBSTR(?templateMotifCigarP69848MF_01225_B542, 1, (STRLEN(?templateMotifCigarP69848MF_01225_B542) - STRLEN(REPLACE(?templateMotifCigarP69848MF_01225_B542, CONCAT('^(?:-*[^-]){', STR(((278 - ?templateMotifSequenceMatchBeginPositionP69848543) + 1)), '}'), '')))), '[a-z]', '')) AS ?step1554) . BIND((STRLEN(SUBSTR(?targetMotifMatchCigarP69848MF_01225_B544, 1, (STRLEN(?targetMotifMatchCigarP69848MF_01225_B544) - STRLEN(REPLACE(?targetMotifMatchCigarP69848MF_01225_B544, CONCAT('^(?:[a-z]*(?:[A-Z]|-)){', STR(?step1554), '}'), ''))))) - STRLEN(REPLACE(SUBSTR(?targetMotifMatchCigarP69848MF_01225_B544, 1, (STRLEN(?targetMotifMatchCigarP69848MF_01225_B544) - STRLEN(REPLACE(?targetMotifMatchCigarP69848MF_01225_B544, CONCAT('^(?:[a-z]*(?:[A-Z]|-)){', STR(?step1554), '}'), '')))), '[^-]', ''))) AS ?step2555) . BIND(((?step2555 + ?targetMotifMatchRegionMatchBeginPositionMF_01225_B545) - 1) AS ?thisPositionOn165) . BIND(?thisPositionOn165 AS ?thisPositionOn166) . BIND(?this AS ?pfs2t556) . BIND(URI(CONCAT(STR(?thisSequence), '#position', STR(?thisPositionOn165))) AS ?pfsb162) . BIND(URI(CONCAT(STR(?thisSequence), '#position', STR(?thisPositionOn166))) AS ?pfse163) . FILTER ((SUBSTR(?thisSequenceValue, ?thisPositionOn165, 1) = 'C')) . BIND(URI(CONCAT(STR(?this), '#MF_01225a161')) AS ?annotation161) . BIND(?this AS ?pfs160) . } OPTIONAL { ?this up:sequence ?thisSequence . ?thisSequence rdf:value ?thisSequenceValue . ?templateMotifMatch561 faldo:location ?templateMotifSequenceMatchRegionP69848562 ; edam:is_output_of ?templateMotifSequenceProfileAlignmentOperationP69848564 ; rdf:type edam:data_0869 ; rdf:value ?templateMotifCigarP69848MF_01225_B557 . ?templateMotifSequenceMatchRegionP69848562 faldo:begin ?templateMotifSequenceMatchBeginP69848563 . ?templateMotifSequenceMatchBeginP69848563 faldo:position ?templateMotifSequenceMatchBeginPositionP69848558 ; faldo:reference isoform:P69848-1 . ?templateMotifSequenceProfileAlignmentOperationP69848564 edam:has_input signature:MF_01225_B ; rdf:type edam:operation_0300 . ?targetMotifMatch565 faldo:location ?targetMotifMatchRegionMatch566 ; edam:is_output_of ?targetMotifSequenceAlignmentOperationMF_01225_B568 ; rdf:type edam:data_0869 ; rdf:value ?targetMotifMatchCigarP69848MF_01225_B559 . ?targetMotifMatchRegionMatch566 faldo:begin ?targetMotifMatchRegionMatchBeginMF_01225_B567 . ?targetMotifMatchRegionMatchBeginMF_01225_B567 faldo:position ?targetMotifMatchRegionMatchBeginPositionMF_01225_B560 ; faldo:reference ?thisSequence . ?targetMotifSequenceAlignmentOperationMF_01225_B568 edam:has_input signature:MF_01225_B ; rdf:type edam:operation_0300 . ?this up:organism ?thisOrganism . ?thisOrganism rdfs:subClassOf+ taxon:2 . BIND(STRLEN(REPLACE(SUBSTR(?templateMotifCigarP69848MF_01225_B557, 1, (STRLEN(?templateMotifCigarP69848MF_01225_B557) - STRLEN(REPLACE(?templateMotifCigarP69848MF_01225_B557, CONCAT('^(?:-*[^-]){', STR(((17 - ?templateMotifSequenceMatchBeginPositionP69848558) + 1)), '}'), '')))), '[a-z]', '')) AS ?step1569) . BIND((STRLEN(SUBSTR(?targetMotifMatchCigarP69848MF_01225_B559, 1, (STRLEN(?targetMotifMatchCigarP69848MF_01225_B559) - STRLEN(REPLACE(?targetMotifMatchCigarP69848MF_01225_B559, CONCAT('^(?:[a-z]*(?:[A-Z]|-)){', STR(?step1569), '}'), ''))))) - STRLEN(REPLACE(SUBSTR(?targetMotifMatchCigarP69848MF_01225_B559, 1, (STRLEN(?targetMotifMatchCigarP69848MF_01225_B559) - STRLEN(REPLACE(?targetMotifMatchCigarP69848MF_01225_B559, CONCAT('^(?:[a-z]*(?:[A-Z]|-)){', STR(?step1569), '}'), '')))), '[^-]', ''))) AS ?step2570) . BIND(((?step2570 + ?targetMotifMatchRegionMatchBeginPositionMF_01225_B560) - 1) AS ?thisPositionOn172) . BIND(?thisPositionOn172 AS ?thisPositionOn173) . BIND(?this AS ?pfs2t571) . BIND(URI(CONCAT(STR(?thisSequence), '#position', STR(?thisPositionOn172))) AS ?pfsb169) . BIND(URI(CONCAT(STR(?thisSequence), '#position', STR(?thisPositionOn173))) AS ?pfse170) . FILTER ((SUBSTR(?thisSequenceValue, ?thisPositionOn172, 1) = 'R')) . BIND(URI(CONCAT(STR(?this), '#MF_01225a168')) AS ?annotation168) . BIND(?this AS ?pfs167) . } OPTIONAL { ?this up:sequence ?thisSequence . ?thisSequence rdf:value ?thisSequenceValue . ?templateMotifMatch576 faldo:location ?templateMotifSequenceMatchRegionP69848577 ; edam:is_output_of ?templateMotifSequenceProfileAlignmentOperationP69848579 ; rdf:type edam:data_0869 ; rdf:value ?templateMotifCigarP69848MF_01225_B572 . ?templateMotifSequenceMatchRegionP69848577 faldo:begin ?templateMotifSequenceMatchBeginP69848578 . ?templateMotifSequenceMatchBeginP69848578 faldo:position ?templateMotifSequenceMatchBeginPositionP69848573 ; faldo:reference isoform:P69848-1 . ?templateMotifSequenceProfileAlignmentOperationP69848579 edam:has_input signature:MF_01225_B ; rdf:type edam:operation_0300 . ?targetMotifMatch580 faldo:location ?targetMotifMatchRegionMatch581 ; edam:is_output_of ?targetMotifSequenceAlignmentOperationMF_01225_B583 ; rdf:type edam:data_0869 ; rdf:value ?targetMotifMatchCigarP69848MF_01225_B574 . ?targetMotifMatchRegionMatch581 faldo:begin ?targetMotifMatchRegionMatchBeginMF_01225_B582 . ?targetMotifMatchRegionMatchBeginMF_01225_B582 faldo:position ?targetMotifMatchRegionMatchBeginPositionMF_01225_B575 ; faldo:reference ?thisSequence . ?targetMotifSequenceAlignmentOperationMF_01225_B583 edam:has_input signature:MF_01225_B ; rdf:type edam:operation_0300 . ?this up:organism ?thisOrganism . ?thisOrganism rdfs:subClassOf+ taxon:2 . BIND(STRLEN(REPLACE(SUBSTR(?templateMotifCigarP69848MF_01225_B572, 1, (STRLEN(?templateMotifCigarP69848MF_01225_B572) - STRLEN(REPLACE(?templateMotifCigarP69848MF_01225_B572, CONCAT('^(?:-*[^-]){', STR(((30 - ?templateMotifSequenceMatchBeginPositionP69848573) + 1)), '}'), '')))), '[a-z]', '')) AS ?step1584) . BIND((STRLEN(SUBSTR(?targetMotifMatchCigarP69848MF_01225_B574, 1, (STRLEN(?targetMotifMatchCigarP69848MF_01225_B574) - STRLEN(REPLACE(?targetMotifMatchCigarP69848MF_01225_B574, CONCAT('^(?:[a-z]*(?:[A-Z]|-)){', STR(?step1584), '}'), ''))))) - STRLEN(REPLACE(SUBSTR(?targetMotifMatchCigarP69848MF_01225_B574, 1, (STRLEN(?targetMotifMatchCigarP69848MF_01225_B574) - STRLEN(REPLACE(?targetMotifMatchCigarP69848MF_01225_B574, CONCAT('^(?:[a-z]*(?:[A-Z]|-)){', STR(?step1584), '}'), '')))), '[^-]', ''))) AS ?step2585) . BIND(((?step2585 + ?targetMotifMatchRegionMatchBeginPositionMF_01225_B575) - 1) AS ?thisPositionOn179) . BIND(?thisPositionOn179 AS ?thisPositionOn180) . BIND(?this AS ?pfs2t586) . BIND(URI(CONCAT(STR(?thisSequence), '#position', STR(?thisPositionOn179))) AS ?pfsb176) . BIND(URI(CONCAT(STR(?thisSequence), '#position', STR(?thisPositionOn180))) AS ?pfse177) . FILTER ((SUBSTR(?thisSequenceValue, ?thisPositionOn179, 1) = 'Y')) . BIND(URI(CONCAT(STR(?this), '#MF_01225a175')) AS ?annotation175) . BIND(?this AS ?pfs174) . } OPTIONAL { ?this up:sequence ?thisSequence . ?thisSequence rdf:value ?thisSequenceValue . ?templateMotifMatch591 faldo:location ?templateMotifSequenceMatchRegionP69848592 ; edam:is_output_of ?templateMotifSequenceProfileAlignmentOperationP69848594 ; rdf:type edam:data_0869 ; rdf:value ?templateMotifCigarP69848MF_01225_B587 . ?templateMotifSequenceMatchRegionP69848592 faldo:begin ?templateMotifSequenceMatchBeginP69848593 . ?templateMotifSequenceMatchBeginP69848593 faldo:position ?templateMotifSequenceMatchBeginPositionP69848588 ; faldo:reference isoform:P69848-1 . ?templateMotifSequenceProfileAlignmentOperationP69848594 edam:has_input signature:MF_01225_B ; rdf:type edam:operation_0300 . ?targetMotifMatch595 faldo:location ?targetMotifMatchRegionMatch596 ; edam:is_output_of ?targetMotifSequenceAlignmentOperationMF_01225_B598 ; rdf:type edam:data_0869 ; rdf:value ?targetMotifMatchCigarP69848MF_01225_B589 . ?targetMotifMatchRegionMatch596 faldo:begin ?targetMotifMatchRegionMatchBeginMF_01225_B597 . ?targetMotifMatchRegionMatchBeginMF_01225_B597 faldo:position ?targetMotifMatchRegionMatchBeginPositionMF_01225_B590 ; faldo:reference ?thisSequence . ?targetMotifSequenceAlignmentOperationMF_01225_B598 edam:has_input signature:MF_01225_B ; rdf:type edam:operation_0300 . ?this up:organism ?thisOrganism . ?thisOrganism rdfs:subClassOf+ taxon:2 . BIND(STRLEN(REPLACE(SUBSTR(?templateMotifCigarP69848MF_01225_B587, 1, (STRLEN(?templateMotifCigarP69848MF_01225_B587) - STRLEN(REPLACE(?templateMotifCigarP69848MF_01225_B587, CONCAT('^(?:-*[^-]){', STR(((71 - ?templateMotifSequenceMatchBeginPositionP69848588) + 1)), '}'), '')))), '[a-z]', '')) AS ?step1599) . BIND((STRLEN(SUBSTR(?targetMotifMatchCigarP69848MF_01225_B589, 1, (STRLEN(?targetMotifMatchCigarP69848MF_01225_B589) - STRLEN(REPLACE(?targetMotifMatchCigarP69848MF_01225_B589, CONCAT('^(?:[a-z]*(?:[A-Z]|-)){', STR(?step1599), '}'), ''))))) - STRLEN(REPLACE(SUBSTR(?targetMotifMatchCigarP69848MF_01225_B589, 1, (STRLEN(?targetMotifMatchCigarP69848MF_01225_B589) - STRLEN(REPLACE(?targetMotifMatchCigarP69848MF_01225_B589, CONCAT('^(?:[a-z]*(?:[A-Z]|-)){', STR(?step1599), '}'), '')))), '[^-]', ''))) AS ?step2600) . BIND(((?step2600 + ?targetMotifMatchRegionMatchBeginPositionMF_01225_B590) - 1) AS ?thisPositionOn186) . BIND(?thisPositionOn186 AS ?thisPositionOn187) . BIND(?this AS ?pfs2t601) . BIND(URI(CONCAT(STR(?thisSequence), '#position', STR(?thisPositionOn186))) AS ?pfsb183) . BIND(URI(CONCAT(STR(?thisSequence), '#position', STR(?thisPositionOn187))) AS ?pfse184) . FILTER ((SUBSTR(?thisSequenceValue, ?thisPositionOn186, 1) = 'R')) . BIND(URI(CONCAT(STR(?this), '#MF_01225a182')) AS ?annotation182) . BIND(?this AS ?pfs181) . } OPTIONAL { ?this up:sequence ?thisSequence . ?thisSequence rdf:value ?thisSequenceValue . ?templateMotifMatch606 faldo:location ?templateMotifSequenceMatchRegionP69848607 ; edam:is_output_of ?templateMotifSequenceProfileAlignmentOperationP69848609 ; rdf:type edam:data_0869 ; rdf:value ?templateMotifCigarP69848MF_01225_B602 . ?templateMotifSequenceMatchRegionP69848607 faldo:begin ?templateMotifSequenceMatchBeginP69848608 . ?templateMotifSequenceMatchBeginP69848608 faldo:position ?templateMotifSequenceMatchBeginPositionP69848603 ; faldo:reference isoform:P69848-1 . ?templateMotifSequenceProfileAlignmentOperationP69848609 edam:has_input signature:MF_01225_B ; rdf:type edam:operation_0300 . ?targetMotifMatch610 faldo:location ?targetMotifMatchRegionMatch611 ; edam:is_output_of ?targetMotifSequenceAlignmentOperationMF_01225_B613 ; rdf:type edam:data_0869 ; rdf:value ?targetMotifMatchCigarP69848MF_01225_B604 . ?targetMotifMatchRegionMatch611 faldo:begin ?targetMotifMatchRegionMatchBeginMF_01225_B612 . ?targetMotifMatchRegionMatchBeginMF_01225_B612 faldo:position ?targetMotifMatchRegionMatchBeginPositionMF_01225_B605 ; faldo:reference ?thisSequence . ?targetMotifSequenceAlignmentOperationMF_01225_B613 edam:has_input signature:MF_01225_B ; rdf:type edam:operation_0300 . ?this up:organism ?thisOrganism . ?thisOrganism rdfs:subClassOf+ taxon:2 . BIND(STRLEN(REPLACE(SUBSTR(?templateMotifCigarP69848MF_01225_B602, 1, (STRLEN(?templateMotifCigarP69848MF_01225_B602) - STRLEN(REPLACE(?templateMotifCigarP69848MF_01225_B602, CONCAT('^(?:-*[^-]){', STR(((75 - ?templateMotifSequenceMatchBeginPositionP69848603) + 1)), '}'), '')))), '[a-z]', '')) AS ?step1614) . BIND((STRLEN(SUBSTR(?targetMotifMatchCigarP69848MF_01225_B604, 1, (STRLEN(?targetMotifMatchCigarP69848MF_01225_B604) - STRLEN(REPLACE(?targetMotifMatchCigarP69848MF_01225_B604, CONCAT('^(?:[a-z]*(?:[A-Z]|-)){', STR(?step1614), '}'), ''))))) - STRLEN(REPLACE(SUBSTR(?targetMotifMatchCigarP69848MF_01225_B604, 1, (STRLEN(?targetMotifMatchCigarP69848MF_01225_B604) - STRLEN(REPLACE(?targetMotifMatchCigarP69848MF_01225_B604, CONCAT('^(?:[a-z]*(?:[A-Z]|-)){', STR(?step1614), '}'), '')))), '[^-]', ''))) AS ?step2615) . BIND(((?step2615 + ?targetMotifMatchRegionMatchBeginPositionMF_01225_B605) - 1) AS ?thisPositionOn193) . BIND(?thisPositionOn193 AS ?thisPositionOn194) . BIND(?this AS ?pfs2t616) . BIND(URI(CONCAT(STR(?thisSequence), '#position', STR(?thisPositionOn193))) AS ?pfsb190) . BIND(URI(CONCAT(STR(?thisSequence), '#position', STR(?thisPositionOn194))) AS ?pfse191) . FILTER ((SUBSTR(?thisSequenceValue, ?thisPositionOn193, 1) = 'G')) . BIND(URI(CONCAT(STR(?this), '#MF_01225a189')) AS ?annotation189) . BIND(?this AS ?pfs188) . } OPTIONAL { ?this up:sequence ?thisSequence . ?thisSequence rdf:value ?thisSequenceValue . ?templateMotifMatch621 faldo:location ?templateMotifSequenceMatchRegionP69848622 ; edam:is_output_of ?templateMotifSequenceProfileAlignmentOperationP69848624 ; rdf:type edam:data_0869 ; rdf:value ?templateMotifCigarP69848MF_01225_B617 . ?templateMotifSequenceMatchRegionP69848622 faldo:begin ?templateMotifSequenceMatchBeginP69848623 . ?templateMotifSequenceMatchBeginP69848623 faldo:position ?templateMotifSequenceMatchBeginPositionP69848618 ; faldo:reference isoform:P69848-1 . ?templateMotifSequenceProfileAlignmentOperationP69848624 edam:has_input signature:MF_01225_B ; rdf:type edam:operation_0300 . ?targetMotifMatch625 faldo:location ?targetMotifMatchRegionMatch626 ; edam:is_output_of ?targetMotifSequenceAlignmentOperationMF_01225_B628 ; rdf:type edam:data_0869 ; rdf:value ?targetMotifMatchCigarP69848MF_01225_B619 . ?targetMotifMatchRegionMatch626 faldo:begin ?targetMotifMatchRegionMatchBeginMF_01225_B627 . ?targetMotifMatchRegionMatchBeginMF_01225_B627 faldo:position ?targetMotifMatchRegionMatchBeginPositionMF_01225_B620 ; faldo:reference ?thisSequence . ?targetMotifSequenceAlignmentOperationMF_01225_B628 edam:has_input signature:MF_01225_B ; rdf:type edam:operation_0300 . ?this up:organism ?thisOrganism . ?thisOrganism rdfs:subClassOf+ taxon:2 . BIND(STRLEN(REPLACE(SUBSTR(?templateMotifCigarP69848MF_01225_B617, 1, (STRLEN(?templateMotifCigarP69848MF_01225_B617) - STRLEN(REPLACE(?templateMotifCigarP69848MF_01225_B617, CONCAT('^(?:-*[^-]){', STR(((102 - ?templateMotifSequenceMatchBeginPositionP69848618) + 1)), '}'), '')))), '[a-z]', '')) AS ?step1629) . BIND((STRLEN(SUBSTR(?targetMotifMatchCigarP69848MF_01225_B619, 1, (STRLEN(?targetMotifMatchCigarP69848MF_01225_B619) - STRLEN(REPLACE(?targetMotifMatchCigarP69848MF_01225_B619, CONCAT('^(?:[a-z]*(?:[A-Z]|-)){', STR(?step1629), '}'), ''))))) - STRLEN(REPLACE(SUBSTR(?targetMotifMatchCigarP69848MF_01225_B619, 1, (STRLEN(?targetMotifMatchCigarP69848MF_01225_B619) - STRLEN(REPLACE(?targetMotifMatchCigarP69848MF_01225_B619, CONCAT('^(?:[a-z]*(?:[A-Z]|-)){', STR(?step1629), '}'), '')))), '[^-]', ''))) AS ?step2630) . BIND(((?step2630 + ?targetMotifMatchRegionMatchBeginPositionMF_01225_B620) - 1) AS ?thisPositionOn200) . BIND(?thisPositionOn200 AS ?thisPositionOn201) . BIND(?this AS ?pfs2t631) . BIND(URI(CONCAT(STR(?thisSequence), '#position', STR(?thisPositionOn200))) AS ?pfsb197) . BIND(URI(CONCAT(STR(?thisSequence), '#position', STR(?thisPositionOn201))) AS ?pfse198) . FILTER (REGEX('[TS]', SUBSTR(?thisSequenceValue, ?thisPositionOn200, 1))) . BIND(URI(CONCAT(STR(?this), '#MF_01225a196')) AS ?annotation196) . BIND(?this AS ?pfs195) . } OPTIONAL { ?this up:sequence ?thisSequence . ?thisSequence rdf:value ?thisSequenceValue . ?templateMotifMatch636 faldo:location ?templateMotifSequenceMatchRegionP69848637 ; edam:is_output_of ?templateMotifSequenceProfileAlignmentOperationP69848639 ; rdf:type edam:data_0869 ; rdf:value ?templateMotifCigarP69848MF_01225_B632 . ?templateMotifSequenceMatchRegionP69848637 faldo:begin ?templateMotifSequenceMatchBeginP69848638 . ?templateMotifSequenceMatchBeginP69848638 faldo:position ?templateMotifSequenceMatchBeginPositionP69848633 ; faldo:reference isoform:P69848-1 . ?templateMotifSequenceProfileAlignmentOperationP69848639 edam:has_input signature:MF_01225_B ; rdf:type edam:operation_0300 . ?targetMotifMatch640 faldo:location ?targetMotifMatchRegionMatch641 ; edam:is_output_of ?targetMotifSequenceAlignmentOperationMF_01225_B643 ; rdf:type edam:data_0869 ; rdf:value ?targetMotifMatchCigarP69848MF_01225_B634 . ?targetMotifMatchRegionMatch641 faldo:begin ?targetMotifMatchRegionMatchBeginMF_01225_B642 . ?targetMotifMatchRegionMatchBeginMF_01225_B642 faldo:position ?targetMotifMatchRegionMatchBeginPositionMF_01225_B635 ; faldo:reference ?thisSequence . ?targetMotifSequenceAlignmentOperationMF_01225_B643 edam:has_input signature:MF_01225_B ; rdf:type edam:operation_0300 . ?this up:organism ?thisOrganism . ?thisOrganism rdfs:subClassOf+ taxon:2 . BIND(STRLEN(REPLACE(SUBSTR(?templateMotifCigarP69848MF_01225_B632, 1, (STRLEN(?templateMotifCigarP69848MF_01225_B632) - STRLEN(REPLACE(?templateMotifCigarP69848MF_01225_B632, CONCAT('^(?:-*[^-]){', STR(((126 - ?templateMotifSequenceMatchBeginPositionP69848633) + 1)), '}'), '')))), '[a-z]', '')) AS ?step1644) . BIND((STRLEN(SUBSTR(?targetMotifMatchCigarP69848MF_01225_B634, 1, (STRLEN(?targetMotifMatchCigarP69848MF_01225_B634) - STRLEN(REPLACE(?targetMotifMatchCigarP69848MF_01225_B634, CONCAT('^(?:[a-z]*(?:[A-Z]|-)){', STR(?step1644), '}'), ''))))) - STRLEN(REPLACE(SUBSTR(?targetMotifMatchCigarP69848MF_01225_B634, 1, (STRLEN(?targetMotifMatchCigarP69848MF_01225_B634) - STRLEN(REPLACE(?targetMotifMatchCigarP69848MF_01225_B634, CONCAT('^(?:[a-z]*(?:[A-Z]|-)){', STR(?step1644), '}'), '')))), '[^-]', ''))) AS ?step2645) . BIND(((?step2645 + ?targetMotifMatchRegionMatchBeginPositionMF_01225_B635) - 1) AS ?thisPositionOn207) . BIND(?thisPositionOn207 AS ?thisPositionOn208) . BIND(?this AS ?pfs2t646) . BIND(URI(CONCAT(STR(?thisSequence), '#position', STR(?thisPositionOn207))) AS ?pfsb204) . BIND(URI(CONCAT(STR(?thisSequence), '#position', STR(?thisPositionOn208))) AS ?pfse205) . FILTER ((SUBSTR(?thisSequenceValue, ?thisPositionOn207, 1) = 'S')) . BIND(URI(CONCAT(STR(?this), '#MF_01225a203')) AS ?annotation203) . BIND(?this AS ?pfs202) . } OPTIONAL { ?this up:sequence ?thisSequence . ?thisSequence rdf:value ?thisSequenceValue . ?templateMotifMatch651 faldo:location ?templateMotifSequenceMatchRegionP69848652 ; edam:is_output_of ?templateMotifSequenceProfileAlignmentOperationP69848654 ; rdf:type edam:data_0869 ; rdf:value ?templateMotifCigarP69848MF_01225_B647 . ?templateMotifSequenceMatchRegionP69848652 faldo:begin ?templateMotifSequenceMatchBeginP69848653 . ?templateMotifSequenceMatchBeginP69848653 faldo:position ?templateMotifSequenceMatchBeginPositionP69848648 ; faldo:reference isoform:P69848-1 . ?templateMotifSequenceProfileAlignmentOperationP69848654 edam:has_input signature:MF_01225_B ; rdf:type edam:operation_0300 . ?targetMotifMatch655 faldo:location ?targetMotifMatchRegionMatch656 ; edam:is_output_of ?targetMotifSequenceAlignmentOperationMF_01225_B658 ; rdf:type edam:data_0869 ; rdf:value ?targetMotifMatchCigarP69848MF_01225_B649 . ?targetMotifMatchRegionMatch656 faldo:begin ?targetMotifMatchRegionMatchBeginMF_01225_B657 . ?targetMotifMatchRegionMatchBeginMF_01225_B657 faldo:position ?targetMotifMatchRegionMatchBeginPositionMF_01225_B650 ; faldo:reference ?thisSequence . ?targetMotifSequenceAlignmentOperationMF_01225_B658 edam:has_input signature:MF_01225_B ; rdf:type edam:operation_0300 . ?this up:organism ?thisOrganism . ?thisOrganism rdfs:subClassOf+ taxon:2 . BIND(STRLEN(REPLACE(SUBSTR(?templateMotifCigarP69848MF_01225_B647, 1, (STRLEN(?templateMotifCigarP69848MF_01225_B647) - STRLEN(REPLACE(?templateMotifCigarP69848MF_01225_B647, CONCAT('^(?:-*[^-]){', STR(((163 - ?templateMotifSequenceMatchBeginPositionP69848648) + 1)), '}'), '')))), '[a-z]', '')) AS ?step1659) . BIND((STRLEN(SUBSTR(?targetMotifMatchCigarP69848MF_01225_B649, 1, (STRLEN(?targetMotifMatchCigarP69848MF_01225_B649) - STRLEN(REPLACE(?targetMotifMatchCigarP69848MF_01225_B649, CONCAT('^(?:[a-z]*(?:[A-Z]|-)){', STR(?step1659), '}'), ''))))) - STRLEN(REPLACE(SUBSTR(?targetMotifMatchCigarP69848MF_01225_B649, 1, (STRLEN(?targetMotifMatchCigarP69848MF_01225_B649) - STRLEN(REPLACE(?targetMotifMatchCigarP69848MF_01225_B649, CONCAT('^(?:[a-z]*(?:[A-Z]|-)){', STR(?step1659), '}'), '')))), '[^-]', ''))) AS ?step2660) . BIND(((?step2660 + ?targetMotifMatchRegionMatchBeginPositionMF_01225_B650) - 1) AS ?thisPositionOn214) . BIND(?thisPositionOn214 AS ?thisPositionOn215) . BIND(?this AS ?pfs2t661) . BIND(URI(CONCAT(STR(?thisSequence), '#position', STR(?thisPositionOn214))) AS ?pfsb211) . BIND(URI(CONCAT(STR(?thisSequence), '#position', STR(?thisPositionOn215))) AS ?pfse212) . FILTER ((SUBSTR(?thisSequenceValue, ?thisPositionOn214, 1) = 'K')) . BIND(URI(CONCAT(STR(?this), '#MF_01225a210')) AS ?annotation210) . BIND(?this AS ?pfs209) . } OPTIONAL { ?this up:sequence ?thisSequence . ?thisSequence rdf:value ?thisSequenceValue . ?templateMotifMatch666 faldo:location ?templateMotifSequenceMatchRegionP69848667 ; edam:is_output_of ?templateMotifSequenceProfileAlignmentOperationP69848669 ; rdf:type edam:data_0869 ; rdf:value ?templateMotifCigarP69848MF_01225_B662 . ?templateMotifSequenceMatchRegionP69848667 faldo:begin ?templateMotifSequenceMatchBeginP69848668 . ?templateMotifSequenceMatchBeginP69848668 faldo:position ?templateMotifSequenceMatchBeginPositionP69848663 ; faldo:reference isoform:P69848-1 . ?templateMotifSequenceProfileAlignmentOperationP69848669 edam:has_input signature:MF_01225_B ; rdf:type edam:operation_0300 . ?targetMotifMatch670 faldo:location ?targetMotifMatchRegionMatch671 ; edam:is_output_of ?targetMotifSequenceAlignmentOperationMF_01225_B673 ; rdf:type edam:data_0869 ; rdf:value ?targetMotifMatchCigarP69848MF_01225_B664 . ?targetMotifMatchRegionMatch671 faldo:begin ?targetMotifMatchRegionMatchBeginMF_01225_B672 . ?targetMotifMatchRegionMatchBeginMF_01225_B672 faldo:position ?targetMotifMatchRegionMatchBeginPositionMF_01225_B665 ; faldo:reference ?thisSequence . ?targetMotifSequenceAlignmentOperationMF_01225_B673 edam:has_input signature:MF_01225_B ; rdf:type edam:operation_0300 . ?this up:organism ?thisOrganism . ?thisOrganism rdfs:subClassOf+ taxon:2 . BIND(STRLEN(REPLACE(SUBSTR(?templateMotifCigarP69848MF_01225_B662, 1, (STRLEN(?templateMotifCigarP69848MF_01225_B662) - STRLEN(REPLACE(?templateMotifCigarP69848MF_01225_B662, CONCAT('^(?:-*[^-]){', STR(((197 - ?templateMotifSequenceMatchBeginPositionP69848663) + 1)), '}'), '')))), '[a-z]', '')) AS ?step1674) . BIND((STRLEN(SUBSTR(?targetMotifMatchCigarP69848MF_01225_B664, 1, (STRLEN(?targetMotifMatchCigarP69848MF_01225_B664) - STRLEN(REPLACE(?targetMotifMatchCigarP69848MF_01225_B664, CONCAT('^(?:[a-z]*(?:[A-Z]|-)){', STR(?step1674), '}'), ''))))) - STRLEN(REPLACE(SUBSTR(?targetMotifMatchCigarP69848MF_01225_B664, 1, (STRLEN(?targetMotifMatchCigarP69848MF_01225_B664) - STRLEN(REPLACE(?targetMotifMatchCigarP69848MF_01225_B664, CONCAT('^(?:[a-z]*(?:[A-Z]|-)){', STR(?step1674), '}'), '')))), '[^-]', ''))) AS ?step2675) . BIND(((?step2675 + ?targetMotifMatchRegionMatchBeginPositionMF_01225_B665) - 1) AS ?thisPositionOn221) . BIND(?thisPositionOn221 AS ?thisPositionOn222) . BIND(?this AS ?pfs2t676) . BIND(URI(CONCAT(STR(?thisSequence), '#position', STR(?thisPositionOn221))) AS ?pfsb218) . BIND(URI(CONCAT(STR(?thisSequence), '#position', STR(?thisPositionOn222))) AS ?pfse219) . FILTER ((SUBSTR(?thisSequenceValue, ?thisPositionOn221, 1) = 'M')) . BIND(URI(CONCAT(STR(?this), '#MF_01225a217')) AS ?annotation217) . BIND(?this AS ?pfs216) . } OPTIONAL { ?this a up:Protein . ?this up:organism ?thisOrganism . ?thisOrganism rdfs:subClassOf+ taxon:2157 . BIND(?this AS ?case7) . BIND(URI(CONCAT(STR(?this), '#MF_01225a8')) AS ?name8) . BIND(URI(CONCAT(STR(?this), '#MF_01225a9')) AS ?name9) . } OPTIONAL { ?this a up:Protein . ?this up:organism ?thisOrganism . ?thisOrganism rdfs:subClassOf+ taxon:2 . BIND(?this AS ?case10) . BIND(URI(CONCAT(STR(?this), '#MF_01225a11')) AS ?name11) . BIND(URI(CONCAT(STR(?this), '#MF_01225a12')) AS ?name12) . } }