@prefix rdf: <http://www.w3.org/1999/02/22-rdf-syntax-ns#> .
@prefix rdfs: <http://www.w3.org/2000/01/rdf-schema#> .
@prefix rdf4j: <http://rdf4j.org/schema/rdf4j#> .
@prefix sesame: <http://www.openrdf.org/schema/sesame#> .
@prefix owl: <http://www.w3.org/2002/07/owl#> .
@prefix xsd: <http://www.w3.org/2001/XMLSchema#> .
@prefix fn: <http://www.w3.org/2005/xpath-functions#> .

<http://purl.uniprot.org/unirules/MF_01436#construct> a <http://www.w3.org/ns/shacl#SPARQLRule>,
    <http://spinrdf.org/sp#Construct>;
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    <http://purl.uniprot.org/unirules/MF_01436#construct-template-150>, <http://purl.uniprot.org/unirules/MF_01436#construct-template-198>,
    <http://purl.uniprot.org/unirules/MF_01436#construct-template-174>, <http://purl.uniprot.org/unirules/MF_01436#construct-template-85>,
    <http://purl.uniprot.org/unirules/MF_01436#construct-template-61>, <http://purl.uniprot.org/unirules/MF_01436#construct-template-197>,
    <http://purl.uniprot.org/unirules/MF_01436#construct-template-173>, <http://purl.uniprot.org/unirules/MF_01436#construct-template-86>,
    <http://purl.uniprot.org/unirules/MF_01436#construct-template-62>, <http://purl.uniprot.org/unirules/MF_01436#construct-template-177>,
    <http://purl.uniprot.org/unirules/MF_01436#construct-template-176>, <http://purl.uniprot.org/unirules/MF_01436#construct-template-152>,
    <http://purl.uniprot.org/unirules/MF_01436#construct-template-261>, <http://purl.uniprot.org/unirules/MF_01436#construct-template-87>,
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    <http://purl.uniprot.org/unirules/MF_01436#construct-template-88>, <http://purl.uniprot.org/unirules/MF_01436#construct-template-64>,
    <http://purl.uniprot.org/unirules/MF_01436#construct-template-40>, <http://purl.uniprot.org/unirules/MF_01436#construct-template-194>,
    <http://purl.uniprot.org/unirules/MF_01436#construct-template-170>, <http://purl.uniprot.org/unirules/MF_01436#construct-template-89>,
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    up:attribution _:519815 ;
    rdf:subject ?pfs42 ;
    rdf:predicate up:annotation ;
    rdf:object ?annotation43 .
  _:519861 a rdf:Statement ;
    up:source unirule:MF_01436 ;
    rdf:subject ?pfs48 ;
    rdf:predicate up:annotation ;
    rdf:object ?annotation49 .
  _:519862 a rdf:Statement ;
    up:attribution _:519816 ;
    rdf:subject ?pfs48 ;
    rdf:predicate up:annotation ;
    rdf:object ?annotation49 .
  _:519863 a rdf:Statement ;
    up:source unirule:MF_01436 ;
    rdf:subject ?pfs54 ;
    rdf:predicate up:annotation ;
    rdf:object ?annotation55 .
  _:519864 a rdf:Statement ;
    up:attribution _:519817 ;
    rdf:subject ?pfs54 ;
    rdf:predicate up:annotation ;
    rdf:object ?annotation55 .
  _:519865 a rdf:Statement ;
    up:source unirule:MF_01436 ;
    rdf:subject ?pfs60 ;
    rdf:predicate up:annotation ;
    rdf:object ?annotation61 .
  _:519866 a rdf:Statement ;
    up:attribution _:519818 ;
    rdf:subject ?pfs60 ;
    rdf:predicate up:annotation ;
    rdf:object ?annotation61 .
  _:519867 a rdf:Statement ;
    up:source unirule:MF_01436 ;
    rdf:subject ?pfs66 ;
    rdf:predicate up:annotation ;
    rdf:object ?annotation67 .
  _:519868 a rdf:Statement ;
    up:attribution _:519819 ;
    rdf:subject ?pfs66 ;
    rdf:predicate up:annotation ;
    rdf:object ?annotation67 .
  _:519869 a rdf:Statement ;
    up:source unirule:MF_01436 ;
    rdf:subject ?pfs72 ;
    rdf:predicate up:annotation ;
    rdf:object ?annotation73 .
  _:519870 a rdf:Statement ;
    up:attribution _:519820 ;
    rdf:subject ?pfs72 ;
    rdf:predicate up:annotation ;
    rdf:object ?annotation73 .
  _:519871 a rdf:Statement ;
    up:source unirule:MF_01436 ;
    rdf:subject ?pfs78 ;
    rdf:predicate up:annotation ;
    rdf:object ?annotation79 .
  _:519872 a rdf:Statement ;
    up:attribution _:519821 ;
    rdf:subject ?pfs78 ;
    rdf:predicate up:annotation ;
    rdf:object ?annotation79 .
  _:519873 a rdf:Statement ;
    up:source unirule:MF_01436 ;
    rdf:subject ?pfs84 ;
    rdf:predicate up:annotation ;
    rdf:object ?annotation85 .
  _:519874 a rdf:Statement ;
    up:attribution _:519822 ;
    rdf:subject ?pfs84 ;
    rdf:predicate up:annotation ;
    rdf:object ?annotation85 .
  _:519875 a rdf:Statement ;
    up:source unirule:MF_01436 ;
    rdf:subject ?pfs90 ;
    rdf:predicate up:annotation ;
    rdf:object ?annotation91 .
  _:519876 a rdf:Statement ;
    up:attribution _:519823 ;
    rdf:subject ?pfs90 ;
    rdf:predicate up:annotation ;
    rdf:object ?annotation91 .
  _:519877 a rdf:Statement ;
    up:source unirule:MF_01436 ;
    rdf:subject ?pfs96 ;
    rdf:predicate up:annotation ;
    rdf:object ?annotation97 .
  _:519878 a rdf:Statement ;
    up:attribution _:519824 ;
    rdf:subject ?pfs96 ;
    rdf:predicate up:annotation ;
    rdf:object ?annotation97 .
  _:519879 a rdf:Statement ;
    up:source unirule:MF_01436 ;
    rdf:subject ?pfs102 ;
    rdf:predicate up:annotation ;
    rdf:object ?annotation103 .
  _:519880 a rdf:Statement ;
    up:attribution _:519825 ;
    rdf:subject ?pfs102 ;
    rdf:predicate up:annotation ;
    rdf:object ?annotation103 .
  _:519881 a rdf:Statement ;
    up:source unirule:MF_01436 ;
    rdf:subject ?pfs108 ;
    rdf:predicate up:annotation ;
    rdf:object ?annotation109 .
  _:519882 a rdf:Statement ;
    up:attribution _:519826 ;
    rdf:subject ?pfs108 ;
    rdf:predicate up:annotation ;
    rdf:object ?annotation109 .
  _:519883 a rdf:Statement ;
    up:source unirule:MF_01436 ;
    rdf:subject ?pfs114 ;
    rdf:predicate up:annotation ;
    rdf:object ?annotation115 .
  _:519884 a rdf:Statement ;
    up:attribution _:519827 ;
    rdf:subject ?pfs114 ;
    rdf:predicate up:annotation ;
    rdf:object ?annotation115 .
  _:519885 a rdf:Statement ;
    up:source unirule:MF_01436 ;
    rdf:subject ?pfs120 ;
    rdf:predicate up:annotation ;
    rdf:object ?annotation121 .
  _:519886 a rdf:Statement ;
    up:attribution _:519828 ;
    rdf:subject ?pfs120 ;
    rdf:predicate up:annotation ;
    rdf:object ?annotation121 .
  _:519887 a rdf:Statement ;
    up:source unirule:MF_01436 ;
    rdf:subject ?pfs126 ;
    rdf:predicate up:annotation ;
    rdf:object ?annotation127 .
  _:519888 a rdf:Statement ;
    up:attribution _:519829 ;
    rdf:subject ?pfs126 ;
    rdf:predicate up:annotation ;
    rdf:object ?annotation127 .
  _:519889 a rdf:Statement ;
    up:source unirule:MF_01436 ;
    rdf:subject ?pfs132 ;
    rdf:predicate up:annotation ;
    rdf:object ?annotation133 .
  _:519890 a rdf:Statement ;
    up:attribution _:519830 ;
    rdf:subject ?pfs132 ;
    rdf:predicate up:annotation ;
    rdf:object ?annotation133 .
  _:519891 a rdf:Statement ;
    up:source unirule:MF_01436 ;
    rdf:subject ?pfs138 ;
    rdf:predicate up:annotation ;
    rdf:object ?annotation139 .
  _:519892 a rdf:Statement ;
    up:attribution _:519831 ;
    rdf:subject ?pfs138 ;
    rdf:predicate up:annotation ;
    rdf:object ?annotation139 .
  _:519893 a rdf:Statement ;
    up:source unirule:MF_01436 ;
    rdf:subject ?pfs144 ;
    rdf:predicate up:annotation ;
    rdf:object ?annotation145 .
  _:519894 a rdf:Statement ;
    up:attribution _:519832 ;
    rdf:subject ?pfs144 ;
    rdf:predicate up:annotation ;
    rdf:object ?annotation145 .
  _:519895 a rdf:Statement ;
    up:source unirule:MF_01436 ;
    rdf:subject ?pfs150 ;
    rdf:predicate up:annotation ;
    rdf:object ?annotation151 .
  _:519896 a rdf:Statement ;
    up:attribution _:519833 ;
    rdf:subject ?pfs150 ;
    rdf:predicate up:annotation ;
    rdf:object ?annotation151 .
}
WHERE {
  #baseURI: http://purl.uniprot.org/unirule/MF_01436
  #Rule MF_01436 Created by:? on:2006-02-27 Modified by:Edouard de Castro on:2022-09-29
  ?this up:organism ?thisOrganism ;
    rdfs:seeAlso signature:MF_01436 .
  ?thisOrganism rdfs:subClassOf+ taxon:91347 .
  BIND(URI(CONCAT(STR(?this), '#MF_01436a0')) AS ?name0) .
  BIND(URI(CONCAT(STR(?this), '#MF_01436a2')) AS ?annotation2) .
  BIND(URI(CONCAT(STR(?this), '#MF_01436a3')) AS ?annotation3) .
  BIND(URI(CONCAT(STR(?this), '#MF_01436a5')) AS ?annotation5) .
  OPTIONAL {
    ?this up:sequence ?thisSequence .
    ?thisSequence rdf:value ?thisSequenceValue .
    ?templateMotifMatch160 faldo:location ?templateMotifSequenceMatchRegionP24077161 ;
      edam:is_output_of ?templateMotifSequenceProfileAlignmentOperationP24077163 ;
      rdf:type edam:data_0869 ;
      rdf:value ?templateMotifCigarP24077MF_01436156 .
    ?templateMotifSequenceMatchRegionP24077161 faldo:begin ?templateMotifSequenceMatchBeginP24077162 .
    ?templateMotifSequenceMatchBeginP24077162 faldo:position ?templateMotifSequenceMatchBeginPositionP24077157 ;
      faldo:reference isoform:P24077-1 .
    ?templateMotifSequenceProfileAlignmentOperationP24077163 edam:has_input signature:MF_01436 ;
      rdf:type edam:operation_0300 .
    ?targetMotifMatch164 faldo:location ?targetMotifMatchRegionMatch165 ;
      edam:is_output_of ?targetMotifSequenceAlignmentOperationMF_01436167 ;
      rdf:type edam:data_0869 ;
      rdf:value ?targetMotifMatchCigarP24077MF_01436158 .
    ?targetMotifMatchRegionMatch165 faldo:begin ?targetMotifMatchRegionMatchBeginMF_01436166 .
    ?targetMotifMatchRegionMatchBeginMF_01436166 faldo:position ?targetMotifMatchRegionMatchBeginPositionMF_01436159 ;
      faldo:reference ?thisSequence .
    ?targetMotifSequenceAlignmentOperationMF_01436167 edam:has_input signature:MF_01436 ;
      rdf:type edam:operation_0300 .
    BIND(1 AS ?thisPositionOn10) .
    BIND(STRLEN(REPLACE(SUBSTR(?templateMotifCigarP24077MF_01436156, 1, (STRLEN(?templateMotifCigarP24077MF_01436156) - STRLEN(REPLACE(?templateMotifCigarP24077MF_01436156, CONCAT('^(?:-*[^-]){', STR(((21 - ?templateMotifSequenceMatchBeginPositionP24077157) + 1)), '}'), '')))), '[a-z]', '')) AS ?step1168) .
    BIND((STRLEN(SUBSTR(?targetMotifMatchCigarP24077MF_01436158, 1, (STRLEN(?targetMotifMatchCigarP24077MF_01436158) - STRLEN(REPLACE(?targetMotifMatchCigarP24077MF_01436158, CONCAT('^(?:[a-z]*(?:[A-Z]|-)){', STR(?step1168), '}'), ''))))) - STRLEN(REPLACE(SUBSTR(?targetMotifMatchCigarP24077MF_01436158, 1, (STRLEN(?targetMotifMatchCigarP24077MF_01436158) - STRLEN(REPLACE(?targetMotifMatchCigarP24077MF_01436158, CONCAT('^(?:[a-z]*(?:[A-Z]|-)){', STR(?step1168), '}'), '')))), '[^-]', ''))) AS ?step2169) .
    BIND(((?step2169 + ?targetMotifMatchRegionMatchBeginPositionMF_01436159) - 1) AS ?thisPositionOn11) .
    BIND(?this AS ?pfs1t170) .
    BIND(URI(CONCAT(STR(?thisSequence), '#position', STR(?thisPositionOn10))) AS ?pfsb8) .
    BIND(URI(CONCAT(STR(?thisSequence), '#position', STR(?thisPositionOn11))) AS ?pfse9) .
    FILTER ((BOUND(?thisPositionOn10) && BOUND(?thisPositionOn11))) .
    BIND(URI(CONCAT(STR(?this), '#MF_01436a7')) AS ?annotation7) .
    BIND(?this AS ?pfs6) .
  }
  OPTIONAL {
    ?this up:sequence ?thisSequence .
    ?thisSequence rdf:value ?thisSequenceValue .
    ?templateMotifMatch175 faldo:location ?templateMotifSequenceMatchRegionP24077176 ;
      edam:is_output_of ?templateMotifSequenceProfileAlignmentOperationP24077178 ;
      rdf:type edam:data_0869 ;
      rdf:value ?templateMotifCigarP24077MF_01436171 .
    ?templateMotifSequenceMatchRegionP24077176 faldo:begin ?templateMotifSequenceMatchBeginP24077177 .
    ?templateMotifSequenceMatchBeginP24077177 faldo:position ?templateMotifSequenceMatchBeginPositionP24077172 ;
      faldo:reference isoform:P24077-1 .
    ?templateMotifSequenceProfileAlignmentOperationP24077178 edam:has_input signature:MF_01436 ;
      rdf:type edam:operation_0300 .
    ?targetMotifMatch179 faldo:location ?targetMotifMatchRegionMatch180 ;
      edam:is_output_of ?targetMotifSequenceAlignmentOperationMF_01436182 ;
      rdf:type edam:data_0869 ;
      rdf:value ?targetMotifMatchCigarP24077MF_01436173 .
    ?targetMotifMatchRegionMatch180 faldo:begin ?targetMotifMatchRegionMatchBeginMF_01436181 .
    ?targetMotifMatchRegionMatchBeginMF_01436181 faldo:position ?targetMotifMatchRegionMatchBeginPositionMF_01436174 ;
      faldo:reference ?thisSequence .
    ?targetMotifSequenceAlignmentOperationMF_01436182 edam:has_input signature:MF_01436 ;
      rdf:type edam:operation_0300 .
    BIND(STRLEN(REPLACE(SUBSTR(?templateMotifCigarP24077MF_01436171, 1, (STRLEN(?templateMotifCigarP24077MF_01436171) - STRLEN(REPLACE(?templateMotifCigarP24077MF_01436171, CONCAT('^(?:-*[^-]){', STR(((22 - ?templateMotifSequenceMatchBeginPositionP24077172) + 1)), '}'), '')))), '[a-z]', '')) AS ?step1183) .
    BIND((STRLEN(SUBSTR(?targetMotifMatchCigarP24077MF_01436173, 1, (STRLEN(?targetMotifMatchCigarP24077MF_01436173) - STRLEN(REPLACE(?targetMotifMatchCigarP24077MF_01436173, CONCAT('^(?:[a-z]*(?:[A-Z]|-)){', STR(?step1183), '}'), ''))))) - STRLEN(REPLACE(SUBSTR(?targetMotifMatchCigarP24077MF_01436173, 1, (STRLEN(?targetMotifMatchCigarP24077MF_01436173) - STRLEN(REPLACE(?targetMotifMatchCigarP24077MF_01436173, CONCAT('^(?:[a-z]*(?:[A-Z]|-)){', STR(?step1183), '}'), '')))), '[^-]', ''))) AS ?step2184) .
    BIND(((?step2184 + ?targetMotifMatchRegionMatchBeginPositionMF_01436174) - 1) AS ?thisPositionOn16) .
    BIND(STRLEN(REPLACE(SUBSTR(?templateMotifCigarP24077MF_01436171, 1, (STRLEN(?templateMotifCigarP24077MF_01436171) - STRLEN(REPLACE(?templateMotifCigarP24077MF_01436171, CONCAT('^(?:-*[^-]){', STR(((42 - ?templateMotifSequenceMatchBeginPositionP24077172) + 1)), '}'), '')))), '[a-z]', '')) AS ?step1185) .
    BIND((STRLEN(SUBSTR(?targetMotifMatchCigarP24077MF_01436173, 1, (STRLEN(?targetMotifMatchCigarP24077MF_01436173) - STRLEN(REPLACE(?targetMotifMatchCigarP24077MF_01436173, CONCAT('^(?:[a-z]*(?:[A-Z]|-)){', STR(?step1185), '}'), ''))))) - STRLEN(REPLACE(SUBSTR(?targetMotifMatchCigarP24077MF_01436173, 1, (STRLEN(?targetMotifMatchCigarP24077MF_01436173) - STRLEN(REPLACE(?targetMotifMatchCigarP24077MF_01436173, CONCAT('^(?:[a-z]*(?:[A-Z]|-)){', STR(?step1185), '}'), '')))), '[^-]', ''))) AS ?step2186) .
    BIND(((?step2186 + ?targetMotifMatchRegionMatchBeginPositionMF_01436174) - 1) AS ?thisPositionOn17) .
    BIND(?this AS ?pfs1t187) .
    BIND(URI(CONCAT(STR(?thisSequence), '#position', STR(?thisPositionOn16))) AS ?pfsb14) .
    BIND(URI(CONCAT(STR(?thisSequence), '#position', STR(?thisPositionOn17))) AS ?pfse15) .
    FILTER ((BOUND(?thisPositionOn16) && BOUND(?thisPositionOn17))) .
    BIND(URI(CONCAT(STR(?this), '#MF_01436a13')) AS ?annotation13) .
    BIND(?this AS ?pfs12) .
  }
  OPTIONAL {
    ?this up:sequence ?thisSequence .
    ?thisSequence rdf:value ?thisSequenceValue .
    ?templateMotifMatch192 faldo:location ?templateMotifSequenceMatchRegionP24077193 ;
      edam:is_output_of ?templateMotifSequenceProfileAlignmentOperationP24077195 ;
      rdf:type edam:data_0869 ;
      rdf:value ?templateMotifCigarP24077MF_01436188 .
    ?templateMotifSequenceMatchRegionP24077193 faldo:begin ?templateMotifSequenceMatchBeginP24077194 .
    ?templateMotifSequenceMatchBeginP24077194 faldo:position ?templateMotifSequenceMatchBeginPositionP24077189 ;
      faldo:reference isoform:P24077-1 .
    ?templateMotifSequenceProfileAlignmentOperationP24077195 edam:has_input signature:MF_01436 ;
      rdf:type edam:operation_0300 .
    ?targetMotifMatch196 faldo:location ?targetMotifMatchRegionMatch197 ;
      edam:is_output_of ?targetMotifSequenceAlignmentOperationMF_01436199 ;
      rdf:type edam:data_0869 ;
      rdf:value ?targetMotifMatchCigarP24077MF_01436190 .
    ?targetMotifMatchRegionMatch197 faldo:begin ?targetMotifMatchRegionMatchBeginMF_01436198 .
    ?targetMotifMatchRegionMatchBeginMF_01436198 faldo:position ?targetMotifMatchRegionMatchBeginPositionMF_01436191 ;
      faldo:reference ?thisSequence .
    ?targetMotifSequenceAlignmentOperationMF_01436199 edam:has_input signature:MF_01436 ;
      rdf:type edam:operation_0300 .
    BIND(STRLEN(REPLACE(SUBSTR(?templateMotifCigarP24077MF_01436188, 1, (STRLEN(?templateMotifCigarP24077MF_01436188) - STRLEN(REPLACE(?templateMotifCigarP24077MF_01436188, CONCAT('^(?:-*[^-]){', STR(((43 - ?templateMotifSequenceMatchBeginPositionP24077189) + 1)), '}'), '')))), '[a-z]', '')) AS ?step1200) .
    BIND((STRLEN(SUBSTR(?targetMotifMatchCigarP24077MF_01436190, 1, (STRLEN(?targetMotifMatchCigarP24077MF_01436190) - STRLEN(REPLACE(?targetMotifMatchCigarP24077MF_01436190, CONCAT('^(?:[a-z]*(?:[A-Z]|-)){', STR(?step1200), '}'), ''))))) - STRLEN(REPLACE(SUBSTR(?targetMotifMatchCigarP24077MF_01436190, 1, (STRLEN(?targetMotifMatchCigarP24077MF_01436190) - STRLEN(REPLACE(?targetMotifMatchCigarP24077MF_01436190, CONCAT('^(?:[a-z]*(?:[A-Z]|-)){', STR(?step1200), '}'), '')))), '[^-]', ''))) AS ?step2201) .
    BIND(((?step2201 + ?targetMotifMatchRegionMatchBeginPositionMF_01436191) - 1) AS ?thisPositionOn22) .
    BIND(STRLEN(REPLACE(SUBSTR(?templateMotifCigarP24077MF_01436188, 1, (STRLEN(?templateMotifCigarP24077MF_01436188) - STRLEN(REPLACE(?templateMotifCigarP24077MF_01436188, CONCAT('^(?:-*[^-]){', STR(((55 - ?templateMotifSequenceMatchBeginPositionP24077189) + 1)), '}'), '')))), '[a-z]', '')) AS ?step1202) .
    BIND((STRLEN(SUBSTR(?targetMotifMatchCigarP24077MF_01436190, 1, (STRLEN(?targetMotifMatchCigarP24077MF_01436190) - STRLEN(REPLACE(?targetMotifMatchCigarP24077MF_01436190, CONCAT('^(?:[a-z]*(?:[A-Z]|-)){', STR(?step1202), '}'), ''))))) - STRLEN(REPLACE(SUBSTR(?targetMotifMatchCigarP24077MF_01436190, 1, (STRLEN(?targetMotifMatchCigarP24077MF_01436190) - STRLEN(REPLACE(?targetMotifMatchCigarP24077MF_01436190, CONCAT('^(?:[a-z]*(?:[A-Z]|-)){', STR(?step1202), '}'), '')))), '[^-]', ''))) AS ?step2203) .
    BIND(((?step2203 + ?targetMotifMatchRegionMatchBeginPositionMF_01436191) - 1) AS ?thisPositionOn23) .
    BIND(?this AS ?pfs1t204) .
    BIND(URI(CONCAT(STR(?thisSequence), '#position', STR(?thisPositionOn22))) AS ?pfsb20) .
    BIND(URI(CONCAT(STR(?thisSequence), '#position', STR(?thisPositionOn23))) AS ?pfse21) .
    FILTER ((BOUND(?thisPositionOn22) && BOUND(?thisPositionOn23))) .
    BIND(URI(CONCAT(STR(?this), '#MF_01436a19')) AS ?annotation19) .
    BIND(?this AS ?pfs18) .
  }
  OPTIONAL {
    ?this up:sequence ?thisSequence .
    ?thisSequence rdf:value ?thisSequenceValue .
    ?templateMotifMatch209 faldo:location ?templateMotifSequenceMatchRegionP24077210 ;
      edam:is_output_of ?templateMotifSequenceProfileAlignmentOperationP24077212 ;
      rdf:type edam:data_0869 ;
      rdf:value ?templateMotifCigarP24077MF_01436205 .
    ?templateMotifSequenceMatchRegionP24077210 faldo:begin ?templateMotifSequenceMatchBeginP24077211 .
    ?templateMotifSequenceMatchBeginP24077211 faldo:position ?templateMotifSequenceMatchBeginPositionP24077206 ;
      faldo:reference isoform:P24077-1 .
    ?templateMotifSequenceProfileAlignmentOperationP24077212 edam:has_input signature:MF_01436 ;
      rdf:type edam:operation_0300 .
    ?targetMotifMatch213 faldo:location ?targetMotifMatchRegionMatch214 ;
      edam:is_output_of ?targetMotifSequenceAlignmentOperationMF_01436216 ;
      rdf:type edam:data_0869 ;
      rdf:value ?targetMotifMatchCigarP24077MF_01436207 .
    ?targetMotifMatchRegionMatch214 faldo:begin ?targetMotifMatchRegionMatchBeginMF_01436215 .
    ?targetMotifMatchRegionMatchBeginMF_01436215 faldo:position ?targetMotifMatchRegionMatchBeginPositionMF_01436208 ;
      faldo:reference ?thisSequence .
    ?targetMotifSequenceAlignmentOperationMF_01436216 edam:has_input signature:MF_01436 ;
      rdf:type edam:operation_0300 .
    BIND(STRLEN(REPLACE(SUBSTR(?templateMotifCigarP24077MF_01436205, 1, (STRLEN(?templateMotifCigarP24077MF_01436205) - STRLEN(REPLACE(?templateMotifCigarP24077MF_01436205, CONCAT('^(?:-*[^-]){', STR(((56 - ?templateMotifSequenceMatchBeginPositionP24077206) + 1)), '}'), '')))), '[a-z]', '')) AS ?step1217) .
    BIND((STRLEN(SUBSTR(?targetMotifMatchCigarP24077MF_01436207, 1, (STRLEN(?targetMotifMatchCigarP24077MF_01436207) - STRLEN(REPLACE(?targetMotifMatchCigarP24077MF_01436207, CONCAT('^(?:[a-z]*(?:[A-Z]|-)){', STR(?step1217), '}'), ''))))) - STRLEN(REPLACE(SUBSTR(?targetMotifMatchCigarP24077MF_01436207, 1, (STRLEN(?targetMotifMatchCigarP24077MF_01436207) - STRLEN(REPLACE(?targetMotifMatchCigarP24077MF_01436207, CONCAT('^(?:[a-z]*(?:[A-Z]|-)){', STR(?step1217), '}'), '')))), '[^-]', ''))) AS ?step2218) .
    BIND(((?step2218 + ?targetMotifMatchRegionMatchBeginPositionMF_01436208) - 1) AS ?thisPositionOn28) .
    BIND(STRLEN(REPLACE(SUBSTR(?templateMotifCigarP24077MF_01436205, 1, (STRLEN(?templateMotifCigarP24077MF_01436205) - STRLEN(REPLACE(?templateMotifCigarP24077MF_01436205, CONCAT('^(?:-*[^-]){', STR(((76 - ?templateMotifSequenceMatchBeginPositionP24077206) + 1)), '}'), '')))), '[a-z]', '')) AS ?step1219) .
    BIND((STRLEN(SUBSTR(?targetMotifMatchCigarP24077MF_01436207, 1, (STRLEN(?targetMotifMatchCigarP24077MF_01436207) - STRLEN(REPLACE(?targetMotifMatchCigarP24077MF_01436207, CONCAT('^(?:[a-z]*(?:[A-Z]|-)){', STR(?step1219), '}'), ''))))) - STRLEN(REPLACE(SUBSTR(?targetMotifMatchCigarP24077MF_01436207, 1, (STRLEN(?targetMotifMatchCigarP24077MF_01436207) - STRLEN(REPLACE(?targetMotifMatchCigarP24077MF_01436207, CONCAT('^(?:[a-z]*(?:[A-Z]|-)){', STR(?step1219), '}'), '')))), '[^-]', ''))) AS ?step2220) .
    BIND(((?step2220 + ?targetMotifMatchRegionMatchBeginPositionMF_01436208) - 1) AS ?thisPositionOn29) .
    BIND(?this AS ?pfs1t221) .
    BIND(URI(CONCAT(STR(?thisSequence), '#position', STR(?thisPositionOn28))) AS ?pfsb26) .
    BIND(URI(CONCAT(STR(?thisSequence), '#position', STR(?thisPositionOn29))) AS ?pfse27) .
    FILTER ((BOUND(?thisPositionOn28) && BOUND(?thisPositionOn29))) .
    BIND(URI(CONCAT(STR(?this), '#MF_01436a25')) AS ?annotation25) .
    BIND(?this AS ?pfs24) .
  }
  OPTIONAL {
    ?this up:sequence ?thisSequence .
    ?thisSequence rdf:value ?thisSequenceValue .
    ?templateMotifMatch226 faldo:location ?templateMotifSequenceMatchRegionP24077227 ;
      edam:is_output_of ?templateMotifSequenceProfileAlignmentOperationP24077229 ;
      rdf:type edam:data_0869 ;
      rdf:value ?templateMotifCigarP24077MF_01436222 .
    ?templateMotifSequenceMatchRegionP24077227 faldo:begin ?templateMotifSequenceMatchBeginP24077228 .
    ?templateMotifSequenceMatchBeginP24077228 faldo:position ?templateMotifSequenceMatchBeginPositionP24077223 ;
      faldo:reference isoform:P24077-1 .
    ?templateMotifSequenceProfileAlignmentOperationP24077229 edam:has_input signature:MF_01436 ;
      rdf:type edam:operation_0300 .
    ?targetMotifMatch230 faldo:location ?targetMotifMatchRegionMatch231 ;
      edam:is_output_of ?targetMotifSequenceAlignmentOperationMF_01436233 ;
      rdf:type edam:data_0869 ;
      rdf:value ?targetMotifMatchCigarP24077MF_01436224 .
    ?targetMotifMatchRegionMatch231 faldo:begin ?targetMotifMatchRegionMatchBeginMF_01436232 .
    ?targetMotifMatchRegionMatchBeginMF_01436232 faldo:position ?targetMotifMatchRegionMatchBeginPositionMF_01436225 ;
      faldo:reference ?thisSequence .
    ?targetMotifSequenceAlignmentOperationMF_01436233 edam:has_input signature:MF_01436 ;
      rdf:type edam:operation_0300 .
    BIND(STRLEN(REPLACE(SUBSTR(?templateMotifCigarP24077MF_01436222, 1, (STRLEN(?templateMotifCigarP24077MF_01436222) - STRLEN(REPLACE(?templateMotifCigarP24077MF_01436222, CONCAT('^(?:-*[^-]){', STR(((77 - ?templateMotifSequenceMatchBeginPositionP24077223) + 1)), '}'), '')))), '[a-z]', '')) AS ?step1234) .
    BIND((STRLEN(SUBSTR(?targetMotifMatchCigarP24077MF_01436224, 1, (STRLEN(?targetMotifMatchCigarP24077MF_01436224) - STRLEN(REPLACE(?targetMotifMatchCigarP24077MF_01436224, CONCAT('^(?:[a-z]*(?:[A-Z]|-)){', STR(?step1234), '}'), ''))))) - STRLEN(REPLACE(SUBSTR(?targetMotifMatchCigarP24077MF_01436224, 1, (STRLEN(?targetMotifMatchCigarP24077MF_01436224) - STRLEN(REPLACE(?targetMotifMatchCigarP24077MF_01436224, CONCAT('^(?:[a-z]*(?:[A-Z]|-)){', STR(?step1234), '}'), '')))), '[^-]', ''))) AS ?step2235) .
    BIND(((?step2235 + ?targetMotifMatchRegionMatchBeginPositionMF_01436225) - 1) AS ?thisPositionOn34) .
    BIND(STRLEN(REPLACE(SUBSTR(?templateMotifCigarP24077MF_01436222, 1, (STRLEN(?templateMotifCigarP24077MF_01436222) - STRLEN(REPLACE(?templateMotifCigarP24077MF_01436222, CONCAT('^(?:-*[^-]){', STR(((83 - ?templateMotifSequenceMatchBeginPositionP24077223) + 1)), '}'), '')))), '[a-z]', '')) AS ?step1236) .
    BIND((STRLEN(SUBSTR(?targetMotifMatchCigarP24077MF_01436224, 1, (STRLEN(?targetMotifMatchCigarP24077MF_01436224) - STRLEN(REPLACE(?targetMotifMatchCigarP24077MF_01436224, CONCAT('^(?:[a-z]*(?:[A-Z]|-)){', STR(?step1236), '}'), ''))))) - STRLEN(REPLACE(SUBSTR(?targetMotifMatchCigarP24077MF_01436224, 1, (STRLEN(?targetMotifMatchCigarP24077MF_01436224) - STRLEN(REPLACE(?targetMotifMatchCigarP24077MF_01436224, CONCAT('^(?:[a-z]*(?:[A-Z]|-)){', STR(?step1236), '}'), '')))), '[^-]', ''))) AS ?step2237) .
    BIND(((?step2237 + ?targetMotifMatchRegionMatchBeginPositionMF_01436225) - 1) AS ?thisPositionOn35) .
    BIND(?this AS ?pfs1t238) .
    BIND(URI(CONCAT(STR(?thisSequence), '#position', STR(?thisPositionOn34))) AS ?pfsb32) .
    BIND(URI(CONCAT(STR(?thisSequence), '#position', STR(?thisPositionOn35))) AS ?pfse33) .
    FILTER ((BOUND(?thisPositionOn34) && BOUND(?thisPositionOn35))) .
    BIND(URI(CONCAT(STR(?this), '#MF_01436a31')) AS ?annotation31) .
    BIND(?this AS ?pfs30) .
  }
  OPTIONAL {
    ?this up:sequence ?thisSequence .
    ?thisSequence rdf:value ?thisSequenceValue .
    ?templateMotifMatch243 faldo:location ?templateMotifSequenceMatchRegionP24077244 ;
      edam:is_output_of ?templateMotifSequenceProfileAlignmentOperationP24077246 ;
      rdf:type edam:data_0869 ;
      rdf:value ?templateMotifCigarP24077MF_01436239 .
    ?templateMotifSequenceMatchRegionP24077244 faldo:begin ?templateMotifSequenceMatchBeginP24077245 .
    ?templateMotifSequenceMatchBeginP24077245 faldo:position ?templateMotifSequenceMatchBeginPositionP24077240 ;
      faldo:reference isoform:P24077-1 .
    ?templateMotifSequenceProfileAlignmentOperationP24077246 edam:has_input signature:MF_01436 ;
      rdf:type edam:operation_0300 .
    ?targetMotifMatch247 faldo:location ?targetMotifMatchRegionMatch248 ;
      edam:is_output_of ?targetMotifSequenceAlignmentOperationMF_01436250 ;
      rdf:type edam:data_0869 ;
      rdf:value ?targetMotifMatchCigarP24077MF_01436241 .
    ?targetMotifMatchRegionMatch248 faldo:begin ?targetMotifMatchRegionMatchBeginMF_01436249 .
    ?targetMotifMatchRegionMatchBeginMF_01436249 faldo:position ?targetMotifMatchRegionMatchBeginPositionMF_01436242 ;
      faldo:reference ?thisSequence .
    ?targetMotifSequenceAlignmentOperationMF_01436250 edam:has_input signature:MF_01436 ;
      rdf:type edam:operation_0300 .
    BIND(STRLEN(REPLACE(SUBSTR(?templateMotifCigarP24077MF_01436239, 1, (STRLEN(?templateMotifCigarP24077MF_01436239) - STRLEN(REPLACE(?templateMotifCigarP24077MF_01436239, CONCAT('^(?:-*[^-]){', STR(((84 - ?templateMotifSequenceMatchBeginPositionP24077240) + 1)), '}'), '')))), '[a-z]', '')) AS ?step1251) .
    BIND((STRLEN(SUBSTR(?targetMotifMatchCigarP24077MF_01436241, 1, (STRLEN(?targetMotifMatchCigarP24077MF_01436241) - STRLEN(REPLACE(?targetMotifMatchCigarP24077MF_01436241, CONCAT('^(?:[a-z]*(?:[A-Z]|-)){', STR(?step1251), '}'), ''))))) - STRLEN(REPLACE(SUBSTR(?targetMotifMatchCigarP24077MF_01436241, 1, (STRLEN(?targetMotifMatchCigarP24077MF_01436241) - STRLEN(REPLACE(?targetMotifMatchCigarP24077MF_01436241, CONCAT('^(?:[a-z]*(?:[A-Z]|-)){', STR(?step1251), '}'), '')))), '[^-]', ''))) AS ?step2252) .
    BIND(((?step2252 + ?targetMotifMatchRegionMatchBeginPositionMF_01436242) - 1) AS ?thisPositionOn40) .
    BIND(STRLEN(REPLACE(SUBSTR(?templateMotifCigarP24077MF_01436239, 1, (STRLEN(?templateMotifCigarP24077MF_01436239) - STRLEN(REPLACE(?templateMotifCigarP24077MF_01436239, CONCAT('^(?:-*[^-]){', STR(((104 - ?templateMotifSequenceMatchBeginPositionP24077240) + 1)), '}'), '')))), '[a-z]', '')) AS ?step1253) .
    BIND((STRLEN(SUBSTR(?targetMotifMatchCigarP24077MF_01436241, 1, (STRLEN(?targetMotifMatchCigarP24077MF_01436241) - STRLEN(REPLACE(?targetMotifMatchCigarP24077MF_01436241, CONCAT('^(?:[a-z]*(?:[A-Z]|-)){', STR(?step1253), '}'), ''))))) - STRLEN(REPLACE(SUBSTR(?targetMotifMatchCigarP24077MF_01436241, 1, (STRLEN(?targetMotifMatchCigarP24077MF_01436241) - STRLEN(REPLACE(?targetMotifMatchCigarP24077MF_01436241, CONCAT('^(?:[a-z]*(?:[A-Z]|-)){', STR(?step1253), '}'), '')))), '[^-]', ''))) AS ?step2254) .
    BIND(((?step2254 + ?targetMotifMatchRegionMatchBeginPositionMF_01436242) - 1) AS ?thisPositionOn41) .
    BIND(?this AS ?pfs1t255) .
    BIND(URI(CONCAT(STR(?thisSequence), '#position', STR(?thisPositionOn40))) AS ?pfsb38) .
    BIND(URI(CONCAT(STR(?thisSequence), '#position', STR(?thisPositionOn41))) AS ?pfse39) .
    FILTER ((BOUND(?thisPositionOn40) && BOUND(?thisPositionOn41))) .
    BIND(URI(CONCAT(STR(?this), '#MF_01436a37')) AS ?annotation37) .
    BIND(?this AS ?pfs36) .
  }
  OPTIONAL {
    ?this up:sequence ?thisSequence .
    ?thisSequence rdf:value ?thisSequenceValue .
    ?templateMotifMatch260 faldo:location ?templateMotifSequenceMatchRegionP24077261 ;
      edam:is_output_of ?templateMotifSequenceProfileAlignmentOperationP24077263 ;
      rdf:type edam:data_0869 ;
      rdf:value ?templateMotifCigarP24077MF_01436256 .
    ?templateMotifSequenceMatchRegionP24077261 faldo:begin ?templateMotifSequenceMatchBeginP24077262 .
    ?templateMotifSequenceMatchBeginP24077262 faldo:position ?templateMotifSequenceMatchBeginPositionP24077257 ;
      faldo:reference isoform:P24077-1 .
    ?templateMotifSequenceProfileAlignmentOperationP24077263 edam:has_input signature:MF_01436 ;
      rdf:type edam:operation_0300 .
    ?targetMotifMatch264 faldo:location ?targetMotifMatchRegionMatch265 ;
      edam:is_output_of ?targetMotifSequenceAlignmentOperationMF_01436267 ;
      rdf:type edam:data_0869 ;
      rdf:value ?targetMotifMatchCigarP24077MF_01436258 .
    ?targetMotifMatchRegionMatch265 faldo:begin ?targetMotifMatchRegionMatchBeginMF_01436266 .
    ?targetMotifMatchRegionMatchBeginMF_01436266 faldo:position ?targetMotifMatchRegionMatchBeginPositionMF_01436259 ;
      faldo:reference ?thisSequence .
    ?targetMotifSequenceAlignmentOperationMF_01436267 edam:has_input signature:MF_01436 ;
      rdf:type edam:operation_0300 .
    BIND(STRLEN(REPLACE(SUBSTR(?templateMotifCigarP24077MF_01436256, 1, (STRLEN(?templateMotifCigarP24077MF_01436256) - STRLEN(REPLACE(?templateMotifCigarP24077MF_01436256, CONCAT('^(?:-*[^-]){', STR(((105 - ?templateMotifSequenceMatchBeginPositionP24077257) + 1)), '}'), '')))), '[a-z]', '')) AS ?step1268) .
    BIND((STRLEN(SUBSTR(?targetMotifMatchCigarP24077MF_01436258, 1, (STRLEN(?targetMotifMatchCigarP24077MF_01436258) - STRLEN(REPLACE(?targetMotifMatchCigarP24077MF_01436258, CONCAT('^(?:[a-z]*(?:[A-Z]|-)){', STR(?step1268), '}'), ''))))) - STRLEN(REPLACE(SUBSTR(?targetMotifMatchCigarP24077MF_01436258, 1, (STRLEN(?targetMotifMatchCigarP24077MF_01436258) - STRLEN(REPLACE(?targetMotifMatchCigarP24077MF_01436258, CONCAT('^(?:[a-z]*(?:[A-Z]|-)){', STR(?step1268), '}'), '')))), '[^-]', ''))) AS ?step2269) .
    BIND(((?step2269 + ?targetMotifMatchRegionMatchBeginPositionMF_01436259) - 1) AS ?thisPositionOn46) .
    BIND(STRLEN(REPLACE(SUBSTR(?templateMotifCigarP24077MF_01436256, 1, (STRLEN(?templateMotifCigarP24077MF_01436256) - STRLEN(REPLACE(?templateMotifCigarP24077MF_01436256, CONCAT('^(?:-*[^-]){', STR(((109 - ?templateMotifSequenceMatchBeginPositionP24077257) + 1)), '}'), '')))), '[a-z]', '')) AS ?step1270) .
    BIND((STRLEN(SUBSTR(?targetMotifMatchCigarP24077MF_01436258, 1, (STRLEN(?targetMotifMatchCigarP24077MF_01436258) - STRLEN(REPLACE(?targetMotifMatchCigarP24077MF_01436258, CONCAT('^(?:[a-z]*(?:[A-Z]|-)){', STR(?step1270), '}'), ''))))) - STRLEN(REPLACE(SUBSTR(?targetMotifMatchCigarP24077MF_01436258, 1, (STRLEN(?targetMotifMatchCigarP24077MF_01436258) - STRLEN(REPLACE(?targetMotifMatchCigarP24077MF_01436258, CONCAT('^(?:[a-z]*(?:[A-Z]|-)){', STR(?step1270), '}'), '')))), '[^-]', ''))) AS ?step2271) .
    BIND(((?step2271 + ?targetMotifMatchRegionMatchBeginPositionMF_01436259) - 1) AS ?thisPositionOn47) .
    BIND(?this AS ?pfs1t272) .
    BIND(URI(CONCAT(STR(?thisSequence), '#position', STR(?thisPositionOn46))) AS ?pfsb44) .
    BIND(URI(CONCAT(STR(?thisSequence), '#position', STR(?thisPositionOn47))) AS ?pfse45) .
    FILTER ((BOUND(?thisPositionOn46) && BOUND(?thisPositionOn47))) .
    BIND(URI(CONCAT(STR(?this), '#MF_01436a43')) AS ?annotation43) .
    BIND(?this AS ?pfs42) .
  }
  OPTIONAL {
    ?this up:sequence ?thisSequence .
    ?thisSequence rdf:value ?thisSequenceValue .
    ?templateMotifMatch277 faldo:location ?templateMotifSequenceMatchRegionP24077278 ;
      edam:is_output_of ?templateMotifSequenceProfileAlignmentOperationP24077280 ;
      rdf:type edam:data_0869 ;
      rdf:value ?templateMotifCigarP24077MF_01436273 .
    ?templateMotifSequenceMatchRegionP24077278 faldo:begin ?templateMotifSequenceMatchBeginP24077279 .
    ?templateMotifSequenceMatchBeginP24077279 faldo:position ?templateMotifSequenceMatchBeginPositionP24077274 ;
      faldo:reference isoform:P24077-1 .
    ?templateMotifSequenceProfileAlignmentOperationP24077280 edam:has_input signature:MF_01436 ;
      rdf:type edam:operation_0300 .
    ?targetMotifMatch281 faldo:location ?targetMotifMatchRegionMatch282 ;
      edam:is_output_of ?targetMotifSequenceAlignmentOperationMF_01436284 ;
      rdf:type edam:data_0869 ;
      rdf:value ?targetMotifMatchCigarP24077MF_01436275 .
    ?targetMotifMatchRegionMatch282 faldo:begin ?targetMotifMatchRegionMatchBeginMF_01436283 .
    ?targetMotifMatchRegionMatchBeginMF_01436283 faldo:position ?targetMotifMatchRegionMatchBeginPositionMF_01436276 ;
      faldo:reference ?thisSequence .
    ?targetMotifSequenceAlignmentOperationMF_01436284 edam:has_input signature:MF_01436 ;
      rdf:type edam:operation_0300 .
    BIND(STRLEN(REPLACE(SUBSTR(?templateMotifCigarP24077MF_01436273, 1, (STRLEN(?templateMotifCigarP24077MF_01436273) - STRLEN(REPLACE(?templateMotifCigarP24077MF_01436273, CONCAT('^(?:-*[^-]){', STR(((110 - ?templateMotifSequenceMatchBeginPositionP24077274) + 1)), '}'), '')))), '[a-z]', '')) AS ?step1285) .
    BIND((STRLEN(SUBSTR(?targetMotifMatchCigarP24077MF_01436275, 1, (STRLEN(?targetMotifMatchCigarP24077MF_01436275) - STRLEN(REPLACE(?targetMotifMatchCigarP24077MF_01436275, CONCAT('^(?:[a-z]*(?:[A-Z]|-)){', STR(?step1285), '}'), ''))))) - STRLEN(REPLACE(SUBSTR(?targetMotifMatchCigarP24077MF_01436275, 1, (STRLEN(?targetMotifMatchCigarP24077MF_01436275) - STRLEN(REPLACE(?targetMotifMatchCigarP24077MF_01436275, CONCAT('^(?:[a-z]*(?:[A-Z]|-)){', STR(?step1285), '}'), '')))), '[^-]', ''))) AS ?step2286) .
    BIND(((?step2286 + ?targetMotifMatchRegionMatchBeginPositionMF_01436276) - 1) AS ?thisPositionOn52) .
    BIND(STRLEN(REPLACE(SUBSTR(?templateMotifCigarP24077MF_01436273, 1, (STRLEN(?templateMotifCigarP24077MF_01436273) - STRLEN(REPLACE(?templateMotifCigarP24077MF_01436273, CONCAT('^(?:-*[^-]){', STR(((130 - ?templateMotifSequenceMatchBeginPositionP24077274) + 1)), '}'), '')))), '[a-z]', '')) AS ?step1287) .
    BIND((STRLEN(SUBSTR(?targetMotifMatchCigarP24077MF_01436275, 1, (STRLEN(?targetMotifMatchCigarP24077MF_01436275) - STRLEN(REPLACE(?targetMotifMatchCigarP24077MF_01436275, CONCAT('^(?:[a-z]*(?:[A-Z]|-)){', STR(?step1287), '}'), ''))))) - STRLEN(REPLACE(SUBSTR(?targetMotifMatchCigarP24077MF_01436275, 1, (STRLEN(?targetMotifMatchCigarP24077MF_01436275) - STRLEN(REPLACE(?targetMotifMatchCigarP24077MF_01436275, CONCAT('^(?:[a-z]*(?:[A-Z]|-)){', STR(?step1287), '}'), '')))), '[^-]', ''))) AS ?step2288) .
    BIND(((?step2288 + ?targetMotifMatchRegionMatchBeginPositionMF_01436276) - 1) AS ?thisPositionOn53) .
    BIND(?this AS ?pfs1t289) .
    BIND(URI(CONCAT(STR(?thisSequence), '#position', STR(?thisPositionOn52))) AS ?pfsb50) .
    BIND(URI(CONCAT(STR(?thisSequence), '#position', STR(?thisPositionOn53))) AS ?pfse51) .
    FILTER ((BOUND(?thisPositionOn52) && BOUND(?thisPositionOn53))) .
    BIND(URI(CONCAT(STR(?this), '#MF_01436a49')) AS ?annotation49) .
    BIND(?this AS ?pfs48) .
  }
  OPTIONAL {
    ?this up:sequence ?thisSequence .
    ?thisSequence rdf:value ?thisSequenceValue .
    ?templateMotifMatch294 faldo:location ?templateMotifSequenceMatchRegionP24077295 ;
      edam:is_output_of ?templateMotifSequenceProfileAlignmentOperationP24077297 ;
      rdf:type edam:data_0869 ;
      rdf:value ?templateMotifCigarP24077MF_01436290 .
    ?templateMotifSequenceMatchRegionP24077295 faldo:begin ?templateMotifSequenceMatchBeginP24077296 .
    ?templateMotifSequenceMatchBeginP24077296 faldo:position ?templateMotifSequenceMatchBeginPositionP24077291 ;
      faldo:reference isoform:P24077-1 .
    ?templateMotifSequenceProfileAlignmentOperationP24077297 edam:has_input signature:MF_01436 ;
      rdf:type edam:operation_0300 .
    ?targetMotifMatch298 faldo:location ?targetMotifMatchRegionMatch299 ;
      edam:is_output_of ?targetMotifSequenceAlignmentOperationMF_01436301 ;
      rdf:type edam:data_0869 ;
      rdf:value ?targetMotifMatchCigarP24077MF_01436292 .
    ?targetMotifMatchRegionMatch299 faldo:begin ?targetMotifMatchRegionMatchBeginMF_01436300 .
    ?targetMotifMatchRegionMatchBeginMF_01436300 faldo:position ?targetMotifMatchRegionMatchBeginPositionMF_01436293 ;
      faldo:reference ?thisSequence .
    ?targetMotifSequenceAlignmentOperationMF_01436301 edam:has_input signature:MF_01436 ;
      rdf:type edam:operation_0300 .
    BIND(STRLEN(REPLACE(SUBSTR(?templateMotifCigarP24077MF_01436290, 1, (STRLEN(?templateMotifCigarP24077MF_01436290) - STRLEN(REPLACE(?templateMotifCigarP24077MF_01436290, CONCAT('^(?:-*[^-]){', STR(((131 - ?templateMotifSequenceMatchBeginPositionP24077291) + 1)), '}'), '')))), '[a-z]', '')) AS ?step1302) .
    BIND((STRLEN(SUBSTR(?targetMotifMatchCigarP24077MF_01436292, 1, (STRLEN(?targetMotifMatchCigarP24077MF_01436292) - STRLEN(REPLACE(?targetMotifMatchCigarP24077MF_01436292, CONCAT('^(?:[a-z]*(?:[A-Z]|-)){', STR(?step1302), '}'), ''))))) - STRLEN(REPLACE(SUBSTR(?targetMotifMatchCigarP24077MF_01436292, 1, (STRLEN(?targetMotifMatchCigarP24077MF_01436292) - STRLEN(REPLACE(?targetMotifMatchCigarP24077MF_01436292, CONCAT('^(?:[a-z]*(?:[A-Z]|-)){', STR(?step1302), '}'), '')))), '[^-]', ''))) AS ?step2303) .
    BIND(((?step2303 + ?targetMotifMatchRegionMatchBeginPositionMF_01436293) - 1) AS ?thisPositionOn58) .
    BIND(STRLEN(REPLACE(SUBSTR(?templateMotifCigarP24077MF_01436290, 1, (STRLEN(?templateMotifCigarP24077MF_01436290) - STRLEN(REPLACE(?templateMotifCigarP24077MF_01436290, CONCAT('^(?:-*[^-]){', STR(((156 - ?templateMotifSequenceMatchBeginPositionP24077291) + 1)), '}'), '')))), '[a-z]', '')) AS ?step1304) .
    BIND((STRLEN(SUBSTR(?targetMotifMatchCigarP24077MF_01436292, 1, (STRLEN(?targetMotifMatchCigarP24077MF_01436292) - STRLEN(REPLACE(?targetMotifMatchCigarP24077MF_01436292, CONCAT('^(?:[a-z]*(?:[A-Z]|-)){', STR(?step1304), '}'), ''))))) - STRLEN(REPLACE(SUBSTR(?targetMotifMatchCigarP24077MF_01436292, 1, (STRLEN(?targetMotifMatchCigarP24077MF_01436292) - STRLEN(REPLACE(?targetMotifMatchCigarP24077MF_01436292, CONCAT('^(?:[a-z]*(?:[A-Z]|-)){', STR(?step1304), '}'), '')))), '[^-]', ''))) AS ?step2305) .
    BIND(((?step2305 + ?targetMotifMatchRegionMatchBeginPositionMF_01436293) - 1) AS ?thisPositionOn59) .
    BIND(?this AS ?pfs1t306) .
    BIND(URI(CONCAT(STR(?thisSequence), '#position', STR(?thisPositionOn58))) AS ?pfsb56) .
    BIND(URI(CONCAT(STR(?thisSequence), '#position', STR(?thisPositionOn59))) AS ?pfse57) .
    FILTER ((BOUND(?thisPositionOn58) && BOUND(?thisPositionOn59))) .
    BIND(URI(CONCAT(STR(?this), '#MF_01436a55')) AS ?annotation55) .
    BIND(?this AS ?pfs54) .
  }
  OPTIONAL {
    ?this up:sequence ?thisSequence .
    ?thisSequence rdf:value ?thisSequenceValue .
    ?templateMotifMatch311 faldo:location ?templateMotifSequenceMatchRegionP24077312 ;
      edam:is_output_of ?templateMotifSequenceProfileAlignmentOperationP24077314 ;
      rdf:type edam:data_0869 ;
      rdf:value ?templateMotifCigarP24077MF_01436307 .
    ?templateMotifSequenceMatchRegionP24077312 faldo:begin ?templateMotifSequenceMatchBeginP24077313 .
    ?templateMotifSequenceMatchBeginP24077313 faldo:position ?templateMotifSequenceMatchBeginPositionP24077308 ;
      faldo:reference isoform:P24077-1 .
    ?templateMotifSequenceProfileAlignmentOperationP24077314 edam:has_input signature:MF_01436 ;
      rdf:type edam:operation_0300 .
    ?targetMotifMatch315 faldo:location ?targetMotifMatchRegionMatch316 ;
      edam:is_output_of ?targetMotifSequenceAlignmentOperationMF_01436318 ;
      rdf:type edam:data_0869 ;
      rdf:value ?targetMotifMatchCigarP24077MF_01436309 .
    ?targetMotifMatchRegionMatch316 faldo:begin ?targetMotifMatchRegionMatchBeginMF_01436317 .
    ?targetMotifMatchRegionMatchBeginMF_01436317 faldo:position ?targetMotifMatchRegionMatchBeginPositionMF_01436310 ;
      faldo:reference ?thisSequence .
    ?targetMotifSequenceAlignmentOperationMF_01436318 edam:has_input signature:MF_01436 ;
      rdf:type edam:operation_0300 .
    BIND(STRLEN(REPLACE(SUBSTR(?templateMotifCigarP24077MF_01436307, 1, (STRLEN(?templateMotifCigarP24077MF_01436307) - STRLEN(REPLACE(?templateMotifCigarP24077MF_01436307, CONCAT('^(?:-*[^-]){', STR(((157 - ?templateMotifSequenceMatchBeginPositionP24077308) + 1)), '}'), '')))), '[a-z]', '')) AS ?step1319) .
    BIND((STRLEN(SUBSTR(?targetMotifMatchCigarP24077MF_01436309, 1, (STRLEN(?targetMotifMatchCigarP24077MF_01436309) - STRLEN(REPLACE(?targetMotifMatchCigarP24077MF_01436309, CONCAT('^(?:[a-z]*(?:[A-Z]|-)){', STR(?step1319), '}'), ''))))) - STRLEN(REPLACE(SUBSTR(?targetMotifMatchCigarP24077MF_01436309, 1, (STRLEN(?targetMotifMatchCigarP24077MF_01436309) - STRLEN(REPLACE(?targetMotifMatchCigarP24077MF_01436309, CONCAT('^(?:[a-z]*(?:[A-Z]|-)){', STR(?step1319), '}'), '')))), '[^-]', ''))) AS ?step2320) .
    BIND(((?step2320 + ?targetMotifMatchRegionMatchBeginPositionMF_01436310) - 1) AS ?thisPositionOn64) .
    BIND(STRLEN(REPLACE(SUBSTR(?templateMotifCigarP24077MF_01436307, 1, (STRLEN(?templateMotifCigarP24077MF_01436307) - STRLEN(REPLACE(?templateMotifCigarP24077MF_01436307, CONCAT('^(?:-*[^-]){', STR(((177 - ?templateMotifSequenceMatchBeginPositionP24077308) + 1)), '}'), '')))), '[a-z]', '')) AS ?step1321) .
    BIND((STRLEN(SUBSTR(?targetMotifMatchCigarP24077MF_01436309, 1, (STRLEN(?targetMotifMatchCigarP24077MF_01436309) - STRLEN(REPLACE(?targetMotifMatchCigarP24077MF_01436309, CONCAT('^(?:[a-z]*(?:[A-Z]|-)){', STR(?step1321), '}'), ''))))) - STRLEN(REPLACE(SUBSTR(?targetMotifMatchCigarP24077MF_01436309, 1, (STRLEN(?targetMotifMatchCigarP24077MF_01436309) - STRLEN(REPLACE(?targetMotifMatchCigarP24077MF_01436309, CONCAT('^(?:[a-z]*(?:[A-Z]|-)){', STR(?step1321), '}'), '')))), '[^-]', ''))) AS ?step2322) .
    BIND(((?step2322 + ?targetMotifMatchRegionMatchBeginPositionMF_01436310) - 1) AS ?thisPositionOn65) .
    BIND(?this AS ?pfs1t323) .
    BIND(URI(CONCAT(STR(?thisSequence), '#position', STR(?thisPositionOn64))) AS ?pfsb62) .
    BIND(URI(CONCAT(STR(?thisSequence), '#position', STR(?thisPositionOn65))) AS ?pfse63) .
    FILTER ((BOUND(?thisPositionOn64) && BOUND(?thisPositionOn65))) .
    BIND(URI(CONCAT(STR(?this), '#MF_01436a61')) AS ?annotation61) .
    BIND(?this AS ?pfs60) .
  }
  OPTIONAL {
    ?this up:sequence ?thisSequence .
    ?thisSequence rdf:value ?thisSequenceValue .
    ?templateMotifMatch328 faldo:location ?templateMotifSequenceMatchRegionP24077329 ;
      edam:is_output_of ?templateMotifSequenceProfileAlignmentOperationP24077331 ;
      rdf:type edam:data_0869 ;
      rdf:value ?templateMotifCigarP24077MF_01436324 .
    ?templateMotifSequenceMatchRegionP24077329 faldo:begin ?templateMotifSequenceMatchBeginP24077330 .
    ?templateMotifSequenceMatchBeginP24077330 faldo:position ?templateMotifSequenceMatchBeginPositionP24077325 ;
      faldo:reference isoform:P24077-1 .
    ?templateMotifSequenceProfileAlignmentOperationP24077331 edam:has_input signature:MF_01436 ;
      rdf:type edam:operation_0300 .
    ?targetMotifMatch332 faldo:location ?targetMotifMatchRegionMatch333 ;
      edam:is_output_of ?targetMotifSequenceAlignmentOperationMF_01436335 ;
      rdf:type edam:data_0869 ;
      rdf:value ?targetMotifMatchCigarP24077MF_01436326 .
    ?targetMotifMatchRegionMatch333 faldo:begin ?targetMotifMatchRegionMatchBeginMF_01436334 .
    ?targetMotifMatchRegionMatchBeginMF_01436334 faldo:position ?targetMotifMatchRegionMatchBeginPositionMF_01436327 ;
      faldo:reference ?thisSequence .
    ?targetMotifSequenceAlignmentOperationMF_01436335 edam:has_input signature:MF_01436 ;
      rdf:type edam:operation_0300 .
    BIND(STRLEN(REPLACE(SUBSTR(?templateMotifCigarP24077MF_01436324, 1, (STRLEN(?templateMotifCigarP24077MF_01436324) - STRLEN(REPLACE(?templateMotifCigarP24077MF_01436324, CONCAT('^(?:-*[^-]){', STR(((178 - ?templateMotifSequenceMatchBeginPositionP24077325) + 1)), '}'), '')))), '[a-z]', '')) AS ?step1336) .
    BIND((STRLEN(SUBSTR(?targetMotifMatchCigarP24077MF_01436326, 1, (STRLEN(?targetMotifMatchCigarP24077MF_01436326) - STRLEN(REPLACE(?targetMotifMatchCigarP24077MF_01436326, CONCAT('^(?:[a-z]*(?:[A-Z]|-)){', STR(?step1336), '}'), ''))))) - STRLEN(REPLACE(SUBSTR(?targetMotifMatchCigarP24077MF_01436326, 1, (STRLEN(?targetMotifMatchCigarP24077MF_01436326) - STRLEN(REPLACE(?targetMotifMatchCigarP24077MF_01436326, CONCAT('^(?:[a-z]*(?:[A-Z]|-)){', STR(?step1336), '}'), '')))), '[^-]', ''))) AS ?step2337) .
    BIND(((?step2337 + ?targetMotifMatchRegionMatchBeginPositionMF_01436327) - 1) AS ?thisPositionOn70) .
    BIND(?thisPositionOn70 AS ?thisPositionOn71) .
    BIND(?this AS ?pfs1t338) .
    BIND(URI(CONCAT(STR(?thisSequence), '#position', STR(?thisPositionOn70))) AS ?pfsb68) .
    BIND(URI(CONCAT(STR(?thisSequence), '#position', STR(?thisPositionOn71))) AS ?pfse69) .
    FILTER (BOUND(?thisPositionOn70)) .
    BIND(URI(CONCAT(STR(?this), '#MF_01436a67')) AS ?annotation67) .
    BIND(?this AS ?pfs66) .
  }
  OPTIONAL {
    ?this up:sequence ?thisSequence .
    ?thisSequence rdf:value ?thisSequenceValue .
    ?templateMotifMatch343 faldo:location ?templateMotifSequenceMatchRegionP24077344 ;
      edam:is_output_of ?templateMotifSequenceProfileAlignmentOperationP24077346 ;
      rdf:type edam:data_0869 ;
      rdf:value ?templateMotifCigarP24077MF_01436339 .
    ?templateMotifSequenceMatchRegionP24077344 faldo:begin ?templateMotifSequenceMatchBeginP24077345 .
    ?templateMotifSequenceMatchBeginP24077345 faldo:position ?templateMotifSequenceMatchBeginPositionP24077340 ;
      faldo:reference isoform:P24077-1 .
    ?templateMotifSequenceProfileAlignmentOperationP24077346 edam:has_input signature:MF_01436 ;
      rdf:type edam:operation_0300 .
    ?targetMotifMatch347 faldo:location ?targetMotifMatchRegionMatch348 ;
      edam:is_output_of ?targetMotifSequenceAlignmentOperationMF_01436350 ;
      rdf:type edam:data_0869 ;
      rdf:value ?targetMotifMatchCigarP24077MF_01436341 .
    ?targetMotifMatchRegionMatch348 faldo:begin ?targetMotifMatchRegionMatchBeginMF_01436349 .
    ?targetMotifMatchRegionMatchBeginMF_01436349 faldo:position ?targetMotifMatchRegionMatchBeginPositionMF_01436342 ;
      faldo:reference ?thisSequence .
    ?targetMotifSequenceAlignmentOperationMF_01436350 edam:has_input signature:MF_01436 ;
      rdf:type edam:operation_0300 .
    BIND(STRLEN(REPLACE(SUBSTR(?templateMotifCigarP24077MF_01436339, 1, (STRLEN(?templateMotifCigarP24077MF_01436339) - STRLEN(REPLACE(?templateMotifCigarP24077MF_01436339, CONCAT('^(?:-*[^-]){', STR(((179 - ?templateMotifSequenceMatchBeginPositionP24077340) + 1)), '}'), '')))), '[a-z]', '')) AS ?step1351) .
    BIND((STRLEN(SUBSTR(?targetMotifMatchCigarP24077MF_01436341, 1, (STRLEN(?targetMotifMatchCigarP24077MF_01436341) - STRLEN(REPLACE(?targetMotifMatchCigarP24077MF_01436341, CONCAT('^(?:[a-z]*(?:[A-Z]|-)){', STR(?step1351), '}'), ''))))) - STRLEN(REPLACE(SUBSTR(?targetMotifMatchCigarP24077MF_01436341, 1, (STRLEN(?targetMotifMatchCigarP24077MF_01436341) - STRLEN(REPLACE(?targetMotifMatchCigarP24077MF_01436341, CONCAT('^(?:[a-z]*(?:[A-Z]|-)){', STR(?step1351), '}'), '')))), '[^-]', ''))) AS ?step2352) .
    BIND(((?step2352 + ?targetMotifMatchRegionMatchBeginPositionMF_01436342) - 1) AS ?thisPositionOn76) .
    BIND(STRLEN(REPLACE(SUBSTR(?templateMotifCigarP24077MF_01436339, 1, (STRLEN(?templateMotifCigarP24077MF_01436339) - STRLEN(REPLACE(?templateMotifCigarP24077MF_01436339, CONCAT('^(?:-*[^-]){', STR(((199 - ?templateMotifSequenceMatchBeginPositionP24077340) + 1)), '}'), '')))), '[a-z]', '')) AS ?step1353) .
    BIND((STRLEN(SUBSTR(?targetMotifMatchCigarP24077MF_01436341, 1, (STRLEN(?targetMotifMatchCigarP24077MF_01436341) - STRLEN(REPLACE(?targetMotifMatchCigarP24077MF_01436341, CONCAT('^(?:[a-z]*(?:[A-Z]|-)){', STR(?step1353), '}'), ''))))) - STRLEN(REPLACE(SUBSTR(?targetMotifMatchCigarP24077MF_01436341, 1, (STRLEN(?targetMotifMatchCigarP24077MF_01436341) - STRLEN(REPLACE(?targetMotifMatchCigarP24077MF_01436341, CONCAT('^(?:[a-z]*(?:[A-Z]|-)){', STR(?step1353), '}'), '')))), '[^-]', ''))) AS ?step2354) .
    BIND(((?step2354 + ?targetMotifMatchRegionMatchBeginPositionMF_01436342) - 1) AS ?thisPositionOn77) .
    BIND(?this AS ?pfs1t355) .
    BIND(URI(CONCAT(STR(?thisSequence), '#position', STR(?thisPositionOn76))) AS ?pfsb74) .
    BIND(URI(CONCAT(STR(?thisSequence), '#position', STR(?thisPositionOn77))) AS ?pfse75) .
    FILTER ((BOUND(?thisPositionOn76) && BOUND(?thisPositionOn77))) .
    BIND(URI(CONCAT(STR(?this), '#MF_01436a73')) AS ?annotation73) .
    BIND(?this AS ?pfs72) .
  }
  OPTIONAL {
    ?this up:sequence ?thisSequence .
    ?thisSequence rdf:value ?thisSequenceValue .
    ?templateMotifMatch360 faldo:location ?templateMotifSequenceMatchRegionP24077361 ;
      edam:is_output_of ?templateMotifSequenceProfileAlignmentOperationP24077363 ;
      rdf:type edam:data_0869 ;
      rdf:value ?templateMotifCigarP24077MF_01436356 .
    ?templateMotifSequenceMatchRegionP24077361 faldo:begin ?templateMotifSequenceMatchBeginP24077362 .
    ?templateMotifSequenceMatchBeginP24077362 faldo:position ?templateMotifSequenceMatchBeginPositionP24077357 ;
      faldo:reference isoform:P24077-1 .
    ?templateMotifSequenceProfileAlignmentOperationP24077363 edam:has_input signature:MF_01436 ;
      rdf:type edam:operation_0300 .
    ?targetMotifMatch364 faldo:location ?targetMotifMatchRegionMatch365 ;
      edam:is_output_of ?targetMotifSequenceAlignmentOperationMF_01436367 ;
      rdf:type edam:data_0869 ;
      rdf:value ?targetMotifMatchCigarP24077MF_01436358 .
    ?targetMotifMatchRegionMatch365 faldo:begin ?targetMotifMatchRegionMatchBeginMF_01436366 .
    ?targetMotifMatchRegionMatchBeginMF_01436366 faldo:position ?targetMotifMatchRegionMatchBeginPositionMF_01436359 ;
      faldo:reference ?thisSequence .
    ?targetMotifSequenceAlignmentOperationMF_01436367 edam:has_input signature:MF_01436 ;
      rdf:type edam:operation_0300 .
    BIND(STRLEN(REPLACE(SUBSTR(?templateMotifCigarP24077MF_01436356, 1, (STRLEN(?templateMotifCigarP24077MF_01436356) - STRLEN(REPLACE(?templateMotifCigarP24077MF_01436356, CONCAT('^(?:-*[^-]){', STR(((200 - ?templateMotifSequenceMatchBeginPositionP24077357) + 1)), '}'), '')))), '[a-z]', '')) AS ?step1368) .
    BIND((STRLEN(SUBSTR(?targetMotifMatchCigarP24077MF_01436358, 1, (STRLEN(?targetMotifMatchCigarP24077MF_01436358) - STRLEN(REPLACE(?targetMotifMatchCigarP24077MF_01436358, CONCAT('^(?:[a-z]*(?:[A-Z]|-)){', STR(?step1368), '}'), ''))))) - STRLEN(REPLACE(SUBSTR(?targetMotifMatchCigarP24077MF_01436358, 1, (STRLEN(?targetMotifMatchCigarP24077MF_01436358) - STRLEN(REPLACE(?targetMotifMatchCigarP24077MF_01436358, CONCAT('^(?:[a-z]*(?:[A-Z]|-)){', STR(?step1368), '}'), '')))), '[^-]', ''))) AS ?step2369) .
    BIND(((?step2369 + ?targetMotifMatchRegionMatchBeginPositionMF_01436359) - 1) AS ?thisPositionOn82) .
    BIND(STRLEN(REPLACE(SUBSTR(?templateMotifCigarP24077MF_01436356, 1, (STRLEN(?templateMotifCigarP24077MF_01436356) - STRLEN(REPLACE(?templateMotifCigarP24077MF_01436356, CONCAT('^(?:-*[^-]){', STR(((218 - ?templateMotifSequenceMatchBeginPositionP24077357) + 1)), '}'), '')))), '[a-z]', '')) AS ?step1370) .
    BIND((STRLEN(SUBSTR(?targetMotifMatchCigarP24077MF_01436358, 1, (STRLEN(?targetMotifMatchCigarP24077MF_01436358) - STRLEN(REPLACE(?targetMotifMatchCigarP24077MF_01436358, CONCAT('^(?:[a-z]*(?:[A-Z]|-)){', STR(?step1370), '}'), ''))))) - STRLEN(REPLACE(SUBSTR(?targetMotifMatchCigarP24077MF_01436358, 1, (STRLEN(?targetMotifMatchCigarP24077MF_01436358) - STRLEN(REPLACE(?targetMotifMatchCigarP24077MF_01436358, CONCAT('^(?:[a-z]*(?:[A-Z]|-)){', STR(?step1370), '}'), '')))), '[^-]', ''))) AS ?step2371) .
    BIND(((?step2371 + ?targetMotifMatchRegionMatchBeginPositionMF_01436359) - 1) AS ?thisPositionOn83) .
    BIND(?this AS ?pfs1t372) .
    BIND(URI(CONCAT(STR(?thisSequence), '#position', STR(?thisPositionOn82))) AS ?pfsb80) .
    BIND(URI(CONCAT(STR(?thisSequence), '#position', STR(?thisPositionOn83))) AS ?pfse81) .
    FILTER ((BOUND(?thisPositionOn82) && BOUND(?thisPositionOn83))) .
    BIND(URI(CONCAT(STR(?this), '#MF_01436a79')) AS ?annotation79) .
    BIND(?this AS ?pfs78) .
  }
  OPTIONAL {
    ?this up:sequence ?thisSequence .
    ?thisSequence rdf:value ?thisSequenceValue .
    ?templateMotifMatch377 faldo:location ?templateMotifSequenceMatchRegionP24077378 ;
      edam:is_output_of ?templateMotifSequenceProfileAlignmentOperationP24077380 ;
      rdf:type edam:data_0869 ;
      rdf:value ?templateMotifCigarP24077MF_01436373 .
    ?templateMotifSequenceMatchRegionP24077378 faldo:begin ?templateMotifSequenceMatchBeginP24077379 .
    ?templateMotifSequenceMatchBeginP24077379 faldo:position ?templateMotifSequenceMatchBeginPositionP24077374 ;
      faldo:reference isoform:P24077-1 .
    ?templateMotifSequenceProfileAlignmentOperationP24077380 edam:has_input signature:MF_01436 ;
      rdf:type edam:operation_0300 .
    ?targetMotifMatch381 faldo:location ?targetMotifMatchRegionMatch382 ;
      edam:is_output_of ?targetMotifSequenceAlignmentOperationMF_01436384 ;
      rdf:type edam:data_0869 ;
      rdf:value ?targetMotifMatchCigarP24077MF_01436375 .
    ?targetMotifMatchRegionMatch382 faldo:begin ?targetMotifMatchRegionMatchBeginMF_01436383 .
    ?targetMotifMatchRegionMatchBeginMF_01436383 faldo:position ?targetMotifMatchRegionMatchBeginPositionMF_01436376 ;
      faldo:reference ?thisSequence .
    ?targetMotifSequenceAlignmentOperationMF_01436384 edam:has_input signature:MF_01436 ;
      rdf:type edam:operation_0300 .
    BIND(STRLEN(REPLACE(SUBSTR(?templateMotifCigarP24077MF_01436373, 1, (STRLEN(?templateMotifCigarP24077MF_01436373) - STRLEN(REPLACE(?templateMotifCigarP24077MF_01436373, CONCAT('^(?:-*[^-]){', STR(((219 - ?templateMotifSequenceMatchBeginPositionP24077374) + 1)), '}'), '')))), '[a-z]', '')) AS ?step1385) .
    BIND((STRLEN(SUBSTR(?targetMotifMatchCigarP24077MF_01436375, 1, (STRLEN(?targetMotifMatchCigarP24077MF_01436375) - STRLEN(REPLACE(?targetMotifMatchCigarP24077MF_01436375, CONCAT('^(?:[a-z]*(?:[A-Z]|-)){', STR(?step1385), '}'), ''))))) - STRLEN(REPLACE(SUBSTR(?targetMotifMatchCigarP24077MF_01436375, 1, (STRLEN(?targetMotifMatchCigarP24077MF_01436375) - STRLEN(REPLACE(?targetMotifMatchCigarP24077MF_01436375, CONCAT('^(?:[a-z]*(?:[A-Z]|-)){', STR(?step1385), '}'), '')))), '[^-]', ''))) AS ?step2386) .
    BIND(((?step2386 + ?targetMotifMatchRegionMatchBeginPositionMF_01436376) - 1) AS ?thisPositionOn88) .
    BIND(STRLEN(REPLACE(SUBSTR(?templateMotifCigarP24077MF_01436373, 1, (STRLEN(?templateMotifCigarP24077MF_01436373) - STRLEN(REPLACE(?templateMotifCigarP24077MF_01436373, CONCAT('^(?:-*[^-]){', STR(((239 - ?templateMotifSequenceMatchBeginPositionP24077374) + 1)), '}'), '')))), '[a-z]', '')) AS ?step1387) .
    BIND((STRLEN(SUBSTR(?targetMotifMatchCigarP24077MF_01436375, 1, (STRLEN(?targetMotifMatchCigarP24077MF_01436375) - STRLEN(REPLACE(?targetMotifMatchCigarP24077MF_01436375, CONCAT('^(?:[a-z]*(?:[A-Z]|-)){', STR(?step1387), '}'), ''))))) - STRLEN(REPLACE(SUBSTR(?targetMotifMatchCigarP24077MF_01436375, 1, (STRLEN(?targetMotifMatchCigarP24077MF_01436375) - STRLEN(REPLACE(?targetMotifMatchCigarP24077MF_01436375, CONCAT('^(?:[a-z]*(?:[A-Z]|-)){', STR(?step1387), '}'), '')))), '[^-]', ''))) AS ?step2388) .
    BIND(((?step2388 + ?targetMotifMatchRegionMatchBeginPositionMF_01436376) - 1) AS ?thisPositionOn89) .
    BIND(?this AS ?pfs1t389) .
    BIND(URI(CONCAT(STR(?thisSequence), '#position', STR(?thisPositionOn88))) AS ?pfsb86) .
    BIND(URI(CONCAT(STR(?thisSequence), '#position', STR(?thisPositionOn89))) AS ?pfse87) .
    FILTER ((BOUND(?thisPositionOn88) && BOUND(?thisPositionOn89))) .
    BIND(URI(CONCAT(STR(?this), '#MF_01436a85')) AS ?annotation85) .
    BIND(?this AS ?pfs84) .
  }
  OPTIONAL {
    ?this up:sequence ?thisSequence .
    ?thisSequence rdf:value ?thisSequenceValue .
    ?templateMotifMatch394 faldo:location ?templateMotifSequenceMatchRegionP24077395 ;
      edam:is_output_of ?templateMotifSequenceProfileAlignmentOperationP24077397 ;
      rdf:type edam:data_0869 ;
      rdf:value ?templateMotifCigarP24077MF_01436390 .
    ?templateMotifSequenceMatchRegionP24077395 faldo:begin ?templateMotifSequenceMatchBeginP24077396 .
    ?templateMotifSequenceMatchBeginP24077396 faldo:position ?templateMotifSequenceMatchBeginPositionP24077391 ;
      faldo:reference isoform:P24077-1 .
    ?templateMotifSequenceProfileAlignmentOperationP24077397 edam:has_input signature:MF_01436 ;
      rdf:type edam:operation_0300 .
    ?targetMotifMatch398 faldo:location ?targetMotifMatchRegionMatch399 ;
      edam:is_output_of ?targetMotifSequenceAlignmentOperationMF_01436401 ;
      rdf:type edam:data_0869 ;
      rdf:value ?targetMotifMatchCigarP24077MF_01436392 .
    ?targetMotifMatchRegionMatch399 faldo:begin ?targetMotifMatchRegionMatchBeginMF_01436400 .
    ?targetMotifMatchRegionMatchBeginMF_01436400 faldo:position ?targetMotifMatchRegionMatchBeginPositionMF_01436393 ;
      faldo:reference ?thisSequence .
    ?targetMotifSequenceAlignmentOperationMF_01436401 edam:has_input signature:MF_01436 ;
      rdf:type edam:operation_0300 .
    BIND(STRLEN(REPLACE(SUBSTR(?templateMotifCigarP24077MF_01436390, 1, (STRLEN(?templateMotifCigarP24077MF_01436390) - STRLEN(REPLACE(?templateMotifCigarP24077MF_01436390, CONCAT('^(?:-*[^-]){', STR(((240 - ?templateMotifSequenceMatchBeginPositionP24077391) + 1)), '}'), '')))), '[a-z]', '')) AS ?step1402) .
    BIND((STRLEN(SUBSTR(?targetMotifMatchCigarP24077MF_01436392, 1, (STRLEN(?targetMotifMatchCigarP24077MF_01436392) - STRLEN(REPLACE(?targetMotifMatchCigarP24077MF_01436392, CONCAT('^(?:[a-z]*(?:[A-Z]|-)){', STR(?step1402), '}'), ''))))) - STRLEN(REPLACE(SUBSTR(?targetMotifMatchCigarP24077MF_01436392, 1, (STRLEN(?targetMotifMatchCigarP24077MF_01436392) - STRLEN(REPLACE(?targetMotifMatchCigarP24077MF_01436392, CONCAT('^(?:[a-z]*(?:[A-Z]|-)){', STR(?step1402), '}'), '')))), '[^-]', ''))) AS ?step2403) .
    BIND(((?step2403 + ?targetMotifMatchRegionMatchBeginPositionMF_01436393) - 1) AS ?thisPositionOn94) .
    BIND(STRLEN(REPLACE(SUBSTR(?templateMotifCigarP24077MF_01436390, 1, (STRLEN(?templateMotifCigarP24077MF_01436390) - STRLEN(REPLACE(?templateMotifCigarP24077MF_01436390, CONCAT('^(?:-*[^-]){', STR(((256 - ?templateMotifSequenceMatchBeginPositionP24077391) + 1)), '}'), '')))), '[a-z]', '')) AS ?step1404) .
    BIND((STRLEN(SUBSTR(?targetMotifMatchCigarP24077MF_01436392, 1, (STRLEN(?targetMotifMatchCigarP24077MF_01436392) - STRLEN(REPLACE(?targetMotifMatchCigarP24077MF_01436392, CONCAT('^(?:[a-z]*(?:[A-Z]|-)){', STR(?step1404), '}'), ''))))) - STRLEN(REPLACE(SUBSTR(?targetMotifMatchCigarP24077MF_01436392, 1, (STRLEN(?targetMotifMatchCigarP24077MF_01436392) - STRLEN(REPLACE(?targetMotifMatchCigarP24077MF_01436392, CONCAT('^(?:[a-z]*(?:[A-Z]|-)){', STR(?step1404), '}'), '')))), '[^-]', ''))) AS ?step2405) .
    BIND(((?step2405 + ?targetMotifMatchRegionMatchBeginPositionMF_01436393) - 1) AS ?thisPositionOn95) .
    BIND(?this AS ?pfs1t406) .
    BIND(URI(CONCAT(STR(?thisSequence), '#position', STR(?thisPositionOn94))) AS ?pfsb92) .
    BIND(URI(CONCAT(STR(?thisSequence), '#position', STR(?thisPositionOn95))) AS ?pfse93) .
    FILTER ((BOUND(?thisPositionOn94) && BOUND(?thisPositionOn95))) .
    BIND(URI(CONCAT(STR(?this), '#MF_01436a91')) AS ?annotation91) .
    BIND(?this AS ?pfs90) .
  }
  OPTIONAL {
    ?this up:sequence ?thisSequence .
    ?thisSequence rdf:value ?thisSequenceValue .
    ?templateMotifMatch411 faldo:location ?templateMotifSequenceMatchRegionP24077412 ;
      edam:is_output_of ?templateMotifSequenceProfileAlignmentOperationP24077414 ;
      rdf:type edam:data_0869 ;
      rdf:value ?templateMotifCigarP24077MF_01436407 .
    ?templateMotifSequenceMatchRegionP24077412 faldo:begin ?templateMotifSequenceMatchBeginP24077413 .
    ?templateMotifSequenceMatchBeginP24077413 faldo:position ?templateMotifSequenceMatchBeginPositionP24077408 ;
      faldo:reference isoform:P24077-1 .
    ?templateMotifSequenceProfileAlignmentOperationP24077414 edam:has_input signature:MF_01436 ;
      rdf:type edam:operation_0300 .
    ?targetMotifMatch415 faldo:location ?targetMotifMatchRegionMatch416 ;
      edam:is_output_of ?targetMotifSequenceAlignmentOperationMF_01436418 ;
      rdf:type edam:data_0869 ;
      rdf:value ?targetMotifMatchCigarP24077MF_01436409 .
    ?targetMotifMatchRegionMatch416 faldo:begin ?targetMotifMatchRegionMatchBeginMF_01436417 .
    ?targetMotifMatchRegionMatchBeginMF_01436417 faldo:position ?targetMotifMatchRegionMatchBeginPositionMF_01436410 ;
      faldo:reference ?thisSequence .
    ?targetMotifSequenceAlignmentOperationMF_01436418 edam:has_input signature:MF_01436 ;
      rdf:type edam:operation_0300 .
    BIND(STRLEN(REPLACE(SUBSTR(?templateMotifCigarP24077MF_01436407, 1, (STRLEN(?templateMotifCigarP24077MF_01436407) - STRLEN(REPLACE(?templateMotifCigarP24077MF_01436407, CONCAT('^(?:-*[^-]){', STR(((257 - ?templateMotifSequenceMatchBeginPositionP24077408) + 1)), '}'), '')))), '[a-z]', '')) AS ?step1419) .
    BIND((STRLEN(SUBSTR(?targetMotifMatchCigarP24077MF_01436409, 1, (STRLEN(?targetMotifMatchCigarP24077MF_01436409) - STRLEN(REPLACE(?targetMotifMatchCigarP24077MF_01436409, CONCAT('^(?:[a-z]*(?:[A-Z]|-)){', STR(?step1419), '}'), ''))))) - STRLEN(REPLACE(SUBSTR(?targetMotifMatchCigarP24077MF_01436409, 1, (STRLEN(?targetMotifMatchCigarP24077MF_01436409) - STRLEN(REPLACE(?targetMotifMatchCigarP24077MF_01436409, CONCAT('^(?:[a-z]*(?:[A-Z]|-)){', STR(?step1419), '}'), '')))), '[^-]', ''))) AS ?step2420) .
    BIND(((?step2420 + ?targetMotifMatchRegionMatchBeginPositionMF_01436410) - 1) AS ?thisPositionOn100) .
    BIND(STRLEN(REPLACE(SUBSTR(?templateMotifCigarP24077MF_01436407, 1, (STRLEN(?templateMotifCigarP24077MF_01436407) - STRLEN(REPLACE(?templateMotifCigarP24077MF_01436407, CONCAT('^(?:-*[^-]){', STR(((277 - ?templateMotifSequenceMatchBeginPositionP24077408) + 1)), '}'), '')))), '[a-z]', '')) AS ?step1421) .
    BIND((STRLEN(SUBSTR(?targetMotifMatchCigarP24077MF_01436409, 1, (STRLEN(?targetMotifMatchCigarP24077MF_01436409) - STRLEN(REPLACE(?targetMotifMatchCigarP24077MF_01436409, CONCAT('^(?:[a-z]*(?:[A-Z]|-)){', STR(?step1421), '}'), ''))))) - STRLEN(REPLACE(SUBSTR(?targetMotifMatchCigarP24077MF_01436409, 1, (STRLEN(?targetMotifMatchCigarP24077MF_01436409) - STRLEN(REPLACE(?targetMotifMatchCigarP24077MF_01436409, CONCAT('^(?:[a-z]*(?:[A-Z]|-)){', STR(?step1421), '}'), '')))), '[^-]', ''))) AS ?step2422) .
    BIND(((?step2422 + ?targetMotifMatchRegionMatchBeginPositionMF_01436410) - 1) AS ?thisPositionOn101) .
    BIND(?this AS ?pfs1t423) .
    BIND(URI(CONCAT(STR(?thisSequence), '#position', STR(?thisPositionOn100))) AS ?pfsb98) .
    BIND(URI(CONCAT(STR(?thisSequence), '#position', STR(?thisPositionOn101))) AS ?pfse99) .
    FILTER ((BOUND(?thisPositionOn100) && BOUND(?thisPositionOn101))) .
    BIND(URI(CONCAT(STR(?this), '#MF_01436a97')) AS ?annotation97) .
    BIND(?this AS ?pfs96) .
  }
  OPTIONAL {
    ?this up:sequence ?thisSequence .
    ?thisSequence rdf:value ?thisSequenceValue .
    ?templateMotifMatch428 faldo:location ?templateMotifSequenceMatchRegionP24077429 ;
      edam:is_output_of ?templateMotifSequenceProfileAlignmentOperationP24077431 ;
      rdf:type edam:data_0869 ;
      rdf:value ?templateMotifCigarP24077MF_01436424 .
    ?templateMotifSequenceMatchRegionP24077429 faldo:begin ?templateMotifSequenceMatchBeginP24077430 .
    ?templateMotifSequenceMatchBeginP24077430 faldo:position ?templateMotifSequenceMatchBeginPositionP24077425 ;
      faldo:reference isoform:P24077-1 .
    ?templateMotifSequenceProfileAlignmentOperationP24077431 edam:has_input signature:MF_01436 ;
      rdf:type edam:operation_0300 .
    ?targetMotifMatch432 faldo:location ?targetMotifMatchRegionMatch433 ;
      edam:is_output_of ?targetMotifSequenceAlignmentOperationMF_01436435 ;
      rdf:type edam:data_0869 ;
      rdf:value ?targetMotifMatchCigarP24077MF_01436426 .
    ?targetMotifMatchRegionMatch433 faldo:begin ?targetMotifMatchRegionMatchBeginMF_01436434 .
    ?targetMotifMatchRegionMatchBeginMF_01436434 faldo:position ?targetMotifMatchRegionMatchBeginPositionMF_01436427 ;
      faldo:reference ?thisSequence .
    ?targetMotifSequenceAlignmentOperationMF_01436435 edam:has_input signature:MF_01436 ;
      rdf:type edam:operation_0300 .
    BIND(STRLEN(REPLACE(SUBSTR(?templateMotifCigarP24077MF_01436424, 1, (STRLEN(?templateMotifCigarP24077MF_01436424) - STRLEN(REPLACE(?templateMotifCigarP24077MF_01436424, CONCAT('^(?:-*[^-]){', STR(((278 - ?templateMotifSequenceMatchBeginPositionP24077425) + 1)), '}'), '')))), '[a-z]', '')) AS ?step1436) .
    BIND((STRLEN(SUBSTR(?targetMotifMatchCigarP24077MF_01436426, 1, (STRLEN(?targetMotifMatchCigarP24077MF_01436426) - STRLEN(REPLACE(?targetMotifMatchCigarP24077MF_01436426, CONCAT('^(?:[a-z]*(?:[A-Z]|-)){', STR(?step1436), '}'), ''))))) - STRLEN(REPLACE(SUBSTR(?targetMotifMatchCigarP24077MF_01436426, 1, (STRLEN(?targetMotifMatchCigarP24077MF_01436426) - STRLEN(REPLACE(?targetMotifMatchCigarP24077MF_01436426, CONCAT('^(?:[a-z]*(?:[A-Z]|-)){', STR(?step1436), '}'), '')))), '[^-]', ''))) AS ?step2437) .
    BIND(((?step2437 + ?targetMotifMatchRegionMatchBeginPositionMF_01436427) - 1) AS ?thisPositionOn106) .
    BIND(STRLEN(REPLACE(SUBSTR(?templateMotifCigarP24077MF_01436424, 1, (STRLEN(?templateMotifCigarP24077MF_01436424) - STRLEN(REPLACE(?templateMotifCigarP24077MF_01436424, CONCAT('^(?:-*[^-]){', STR(((287 - ?templateMotifSequenceMatchBeginPositionP24077425) + 1)), '}'), '')))), '[a-z]', '')) AS ?step1438) .
    BIND((STRLEN(SUBSTR(?targetMotifMatchCigarP24077MF_01436426, 1, (STRLEN(?targetMotifMatchCigarP24077MF_01436426) - STRLEN(REPLACE(?targetMotifMatchCigarP24077MF_01436426, CONCAT('^(?:[a-z]*(?:[A-Z]|-)){', STR(?step1438), '}'), ''))))) - STRLEN(REPLACE(SUBSTR(?targetMotifMatchCigarP24077MF_01436426, 1, (STRLEN(?targetMotifMatchCigarP24077MF_01436426) - STRLEN(REPLACE(?targetMotifMatchCigarP24077MF_01436426, CONCAT('^(?:[a-z]*(?:[A-Z]|-)){', STR(?step1438), '}'), '')))), '[^-]', ''))) AS ?step2439) .
    BIND(((?step2439 + ?targetMotifMatchRegionMatchBeginPositionMF_01436427) - 1) AS ?thisPositionOn107) .
    BIND(?this AS ?pfs1t440) .
    BIND(URI(CONCAT(STR(?thisSequence), '#position', STR(?thisPositionOn106))) AS ?pfsb104) .
    BIND(URI(CONCAT(STR(?thisSequence), '#position', STR(?thisPositionOn107))) AS ?pfse105) .
    FILTER ((BOUND(?thisPositionOn106) && BOUND(?thisPositionOn107))) .
    BIND(URI(CONCAT(STR(?this), '#MF_01436a103')) AS ?annotation103) .
    BIND(?this AS ?pfs102) .
  }
  OPTIONAL {
    ?this up:sequence ?thisSequence .
    ?thisSequence rdf:value ?thisSequenceValue .
    ?templateMotifMatch445 faldo:location ?templateMotifSequenceMatchRegionP24077446 ;
      edam:is_output_of ?templateMotifSequenceProfileAlignmentOperationP24077448 ;
      rdf:type edam:data_0869 ;
      rdf:value ?templateMotifCigarP24077MF_01436441 .
    ?templateMotifSequenceMatchRegionP24077446 faldo:begin ?templateMotifSequenceMatchBeginP24077447 .
    ?templateMotifSequenceMatchBeginP24077447 faldo:position ?templateMotifSequenceMatchBeginPositionP24077442 ;
      faldo:reference isoform:P24077-1 .
    ?templateMotifSequenceProfileAlignmentOperationP24077448 edam:has_input signature:MF_01436 ;
      rdf:type edam:operation_0300 .
    ?targetMotifMatch449 faldo:location ?targetMotifMatchRegionMatch450 ;
      edam:is_output_of ?targetMotifSequenceAlignmentOperationMF_01436452 ;
      rdf:type edam:data_0869 ;
      rdf:value ?targetMotifMatchCigarP24077MF_01436443 .
    ?targetMotifMatchRegionMatch450 faldo:begin ?targetMotifMatchRegionMatchBeginMF_01436451 .
    ?targetMotifMatchRegionMatchBeginMF_01436451 faldo:position ?targetMotifMatchRegionMatchBeginPositionMF_01436444 ;
      faldo:reference ?thisSequence .
    ?targetMotifSequenceAlignmentOperationMF_01436452 edam:has_input signature:MF_01436 ;
      rdf:type edam:operation_0300 .
    BIND(STRLEN(REPLACE(SUBSTR(?templateMotifCigarP24077MF_01436441, 1, (STRLEN(?templateMotifCigarP24077MF_01436441) - STRLEN(REPLACE(?templateMotifCigarP24077MF_01436441, CONCAT('^(?:-*[^-]){', STR(((288 - ?templateMotifSequenceMatchBeginPositionP24077442) + 1)), '}'), '')))), '[a-z]', '')) AS ?step1453) .
    BIND((STRLEN(SUBSTR(?targetMotifMatchCigarP24077MF_01436443, 1, (STRLEN(?targetMotifMatchCigarP24077MF_01436443) - STRLEN(REPLACE(?targetMotifMatchCigarP24077MF_01436443, CONCAT('^(?:[a-z]*(?:[A-Z]|-)){', STR(?step1453), '}'), ''))))) - STRLEN(REPLACE(SUBSTR(?targetMotifMatchCigarP24077MF_01436443, 1, (STRLEN(?targetMotifMatchCigarP24077MF_01436443) - STRLEN(REPLACE(?targetMotifMatchCigarP24077MF_01436443, CONCAT('^(?:[a-z]*(?:[A-Z]|-)){', STR(?step1453), '}'), '')))), '[^-]', ''))) AS ?step2454) .
    BIND(((?step2454 + ?targetMotifMatchRegionMatchBeginPositionMF_01436444) - 1) AS ?thisPositionOn112) .
    BIND(STRLEN(REPLACE(SUBSTR(?templateMotifCigarP24077MF_01436441, 1, (STRLEN(?templateMotifCigarP24077MF_01436441) - STRLEN(REPLACE(?templateMotifCigarP24077MF_01436441, CONCAT('^(?:-*[^-]){', STR(((307 - ?templateMotifSequenceMatchBeginPositionP24077442) + 1)), '}'), '')))), '[a-z]', '')) AS ?step1455) .
    BIND((STRLEN(SUBSTR(?targetMotifMatchCigarP24077MF_01436443, 1, (STRLEN(?targetMotifMatchCigarP24077MF_01436443) - STRLEN(REPLACE(?targetMotifMatchCigarP24077MF_01436443, CONCAT('^(?:[a-z]*(?:[A-Z]|-)){', STR(?step1455), '}'), ''))))) - STRLEN(REPLACE(SUBSTR(?targetMotifMatchCigarP24077MF_01436443, 1, (STRLEN(?targetMotifMatchCigarP24077MF_01436443) - STRLEN(REPLACE(?targetMotifMatchCigarP24077MF_01436443, CONCAT('^(?:[a-z]*(?:[A-Z]|-)){', STR(?step1455), '}'), '')))), '[^-]', ''))) AS ?step2456) .
    BIND(((?step2456 + ?targetMotifMatchRegionMatchBeginPositionMF_01436444) - 1) AS ?thisPositionOn113) .
    BIND(?this AS ?pfs1t457) .
    BIND(URI(CONCAT(STR(?thisSequence), '#position', STR(?thisPositionOn112))) AS ?pfsb110) .
    BIND(URI(CONCAT(STR(?thisSequence), '#position', STR(?thisPositionOn113))) AS ?pfse111) .
    FILTER ((BOUND(?thisPositionOn112) && BOUND(?thisPositionOn113))) .
    BIND(URI(CONCAT(STR(?this), '#MF_01436a109')) AS ?annotation109) .
    BIND(?this AS ?pfs108) .
  }
  OPTIONAL {
    ?this up:sequence ?thisSequence .
    ?thisSequence rdf:value ?thisSequenceValue .
    ?templateMotifMatch462 faldo:location ?templateMotifSequenceMatchRegionP24077463 ;
      edam:is_output_of ?templateMotifSequenceProfileAlignmentOperationP24077465 ;
      rdf:type edam:data_0869 ;
      rdf:value ?templateMotifCigarP24077MF_01436458 .
    ?templateMotifSequenceMatchRegionP24077463 faldo:begin ?templateMotifSequenceMatchBeginP24077464 .
    ?templateMotifSequenceMatchBeginP24077464 faldo:position ?templateMotifSequenceMatchBeginPositionP24077459 ;
      faldo:reference isoform:P24077-1 .
    ?templateMotifSequenceProfileAlignmentOperationP24077465 edam:has_input signature:MF_01436 ;
      rdf:type edam:operation_0300 .
    ?targetMotifMatch466 faldo:location ?targetMotifMatchRegionMatch467 ;
      edam:is_output_of ?targetMotifSequenceAlignmentOperationMF_01436469 ;
      rdf:type edam:data_0869 ;
      rdf:value ?targetMotifMatchCigarP24077MF_01436460 .
    ?targetMotifMatchRegionMatch467 faldo:begin ?targetMotifMatchRegionMatchBeginMF_01436468 .
    ?targetMotifMatchRegionMatchBeginMF_01436468 faldo:position ?targetMotifMatchRegionMatchBeginPositionMF_01436461 ;
      faldo:reference ?thisSequence .
    ?targetMotifSequenceAlignmentOperationMF_01436469 edam:has_input signature:MF_01436 ;
      rdf:type edam:operation_0300 .
    BIND(STRLEN(REPLACE(SUBSTR(?templateMotifCigarP24077MF_01436458, 1, (STRLEN(?templateMotifCigarP24077MF_01436458) - STRLEN(REPLACE(?templateMotifCigarP24077MF_01436458, CONCAT('^(?:-*[^-]){', STR(((308 - ?templateMotifSequenceMatchBeginPositionP24077459) + 1)), '}'), '')))), '[a-z]', '')) AS ?step1470) .
    BIND((STRLEN(SUBSTR(?targetMotifMatchCigarP24077MF_01436460, 1, (STRLEN(?targetMotifMatchCigarP24077MF_01436460) - STRLEN(REPLACE(?targetMotifMatchCigarP24077MF_01436460, CONCAT('^(?:[a-z]*(?:[A-Z]|-)){', STR(?step1470), '}'), ''))))) - STRLEN(REPLACE(SUBSTR(?targetMotifMatchCigarP24077MF_01436460, 1, (STRLEN(?targetMotifMatchCigarP24077MF_01436460) - STRLEN(REPLACE(?targetMotifMatchCigarP24077MF_01436460, CONCAT('^(?:[a-z]*(?:[A-Z]|-)){', STR(?step1470), '}'), '')))), '[^-]', ''))) AS ?step2471) .
    BIND(((?step2471 + ?targetMotifMatchRegionMatchBeginPositionMF_01436461) - 1) AS ?thisPositionOn118) .
    BIND(STRLEN(REPLACE(SUBSTR(?templateMotifCigarP24077MF_01436458, 1, (STRLEN(?templateMotifCigarP24077MF_01436458) - STRLEN(REPLACE(?templateMotifCigarP24077MF_01436458, CONCAT('^(?:-*[^-]){', STR(((313 - ?templateMotifSequenceMatchBeginPositionP24077459) + 1)), '}'), '')))), '[a-z]', '')) AS ?step1472) .
    BIND((STRLEN(SUBSTR(?targetMotifMatchCigarP24077MF_01436460, 1, (STRLEN(?targetMotifMatchCigarP24077MF_01436460) - STRLEN(REPLACE(?targetMotifMatchCigarP24077MF_01436460, CONCAT('^(?:[a-z]*(?:[A-Z]|-)){', STR(?step1472), '}'), ''))))) - STRLEN(REPLACE(SUBSTR(?targetMotifMatchCigarP24077MF_01436460, 1, (STRLEN(?targetMotifMatchCigarP24077MF_01436460) - STRLEN(REPLACE(?targetMotifMatchCigarP24077MF_01436460, CONCAT('^(?:[a-z]*(?:[A-Z]|-)){', STR(?step1472), '}'), '')))), '[^-]', ''))) AS ?step2473) .
    BIND(((?step2473 + ?targetMotifMatchRegionMatchBeginPositionMF_01436461) - 1) AS ?thisPositionOn119) .
    BIND(?this AS ?pfs1t474) .
    BIND(URI(CONCAT(STR(?thisSequence), '#position', STR(?thisPositionOn118))) AS ?pfsb116) .
    BIND(URI(CONCAT(STR(?thisSequence), '#position', STR(?thisPositionOn119))) AS ?pfse117) .
    FILTER ((BOUND(?thisPositionOn118) && BOUND(?thisPositionOn119))) .
    BIND(URI(CONCAT(STR(?this), '#MF_01436a115')) AS ?annotation115) .
    BIND(?this AS ?pfs114) .
  }
  OPTIONAL {
    ?this up:sequence ?thisSequence .
    ?thisSequence rdf:value ?thisSequenceValue .
    ?templateMotifMatch479 faldo:location ?templateMotifSequenceMatchRegionP24077480 ;
      edam:is_output_of ?templateMotifSequenceProfileAlignmentOperationP24077482 ;
      rdf:type edam:data_0869 ;
      rdf:value ?templateMotifCigarP24077MF_01436475 .
    ?templateMotifSequenceMatchRegionP24077480 faldo:begin ?templateMotifSequenceMatchBeginP24077481 .
    ?templateMotifSequenceMatchBeginP24077481 faldo:position ?templateMotifSequenceMatchBeginPositionP24077476 ;
      faldo:reference isoform:P24077-1 .
    ?templateMotifSequenceProfileAlignmentOperationP24077482 edam:has_input signature:MF_01436 ;
      rdf:type edam:operation_0300 .
    ?targetMotifMatch483 faldo:location ?targetMotifMatchRegionMatch484 ;
      edam:is_output_of ?targetMotifSequenceAlignmentOperationMF_01436486 ;
      rdf:type edam:data_0869 ;
      rdf:value ?targetMotifMatchCigarP24077MF_01436477 .
    ?targetMotifMatchRegionMatch484 faldo:begin ?targetMotifMatchRegionMatchBeginMF_01436485 .
    ?targetMotifMatchRegionMatchBeginMF_01436485 faldo:position ?targetMotifMatchRegionMatchBeginPositionMF_01436478 ;
      faldo:reference ?thisSequence .
    ?targetMotifSequenceAlignmentOperationMF_01436486 edam:has_input signature:MF_01436 ;
      rdf:type edam:operation_0300 .
    BIND(STRLEN(REPLACE(SUBSTR(?templateMotifCigarP24077MF_01436475, 1, (STRLEN(?templateMotifCigarP24077MF_01436475) - STRLEN(REPLACE(?templateMotifCigarP24077MF_01436475, CONCAT('^(?:-*[^-]){', STR(((314 - ?templateMotifSequenceMatchBeginPositionP24077476) + 1)), '}'), '')))), '[a-z]', '')) AS ?step1487) .
    BIND((STRLEN(SUBSTR(?targetMotifMatchCigarP24077MF_01436477, 1, (STRLEN(?targetMotifMatchCigarP24077MF_01436477) - STRLEN(REPLACE(?targetMotifMatchCigarP24077MF_01436477, CONCAT('^(?:[a-z]*(?:[A-Z]|-)){', STR(?step1487), '}'), ''))))) - STRLEN(REPLACE(SUBSTR(?targetMotifMatchCigarP24077MF_01436477, 1, (STRLEN(?targetMotifMatchCigarP24077MF_01436477) - STRLEN(REPLACE(?targetMotifMatchCigarP24077MF_01436477, CONCAT('^(?:[a-z]*(?:[A-Z]|-)){', STR(?step1487), '}'), '')))), '[^-]', ''))) AS ?step2488) .
    BIND(((?step2488 + ?targetMotifMatchRegionMatchBeginPositionMF_01436478) - 1) AS ?thisPositionOn124) .
    BIND(STRLEN(REPLACE(SUBSTR(?templateMotifCigarP24077MF_01436475, 1, (STRLEN(?templateMotifCigarP24077MF_01436475) - STRLEN(REPLACE(?templateMotifCigarP24077MF_01436475, CONCAT('^(?:-*[^-]){', STR(((336 - ?templateMotifSequenceMatchBeginPositionP24077476) + 1)), '}'), '')))), '[a-z]', '')) AS ?step1489) .
    BIND((STRLEN(SUBSTR(?targetMotifMatchCigarP24077MF_01436477, 1, (STRLEN(?targetMotifMatchCigarP24077MF_01436477) - STRLEN(REPLACE(?targetMotifMatchCigarP24077MF_01436477, CONCAT('^(?:[a-z]*(?:[A-Z]|-)){', STR(?step1489), '}'), ''))))) - STRLEN(REPLACE(SUBSTR(?targetMotifMatchCigarP24077MF_01436477, 1, (STRLEN(?targetMotifMatchCigarP24077MF_01436477) - STRLEN(REPLACE(?targetMotifMatchCigarP24077MF_01436477, CONCAT('^(?:[a-z]*(?:[A-Z]|-)){', STR(?step1489), '}'), '')))), '[^-]', ''))) AS ?step2490) .
    BIND(((?step2490 + ?targetMotifMatchRegionMatchBeginPositionMF_01436478) - 1) AS ?thisPositionOn125) .
    BIND(?this AS ?pfs1t491) .
    BIND(URI(CONCAT(STR(?thisSequence), '#position', STR(?thisPositionOn124))) AS ?pfsb122) .
    BIND(URI(CONCAT(STR(?thisSequence), '#position', STR(?thisPositionOn125))) AS ?pfse123) .
    FILTER ((BOUND(?thisPositionOn124) && BOUND(?thisPositionOn125))) .
    BIND(URI(CONCAT(STR(?this), '#MF_01436a121')) AS ?annotation121) .
    BIND(?this AS ?pfs120) .
  }
  OPTIONAL {
    ?this up:sequence ?thisSequence .
    ?thisSequence rdf:value ?thisSequenceValue .
    ?templateMotifMatch496 faldo:location ?templateMotifSequenceMatchRegionP24077497 ;
      edam:is_output_of ?templateMotifSequenceProfileAlignmentOperationP24077499 ;
      rdf:type edam:data_0869 ;
      rdf:value ?templateMotifCigarP24077MF_01436492 .
    ?templateMotifSequenceMatchRegionP24077497 faldo:begin ?templateMotifSequenceMatchBeginP24077498 .
    ?templateMotifSequenceMatchBeginP24077498 faldo:position ?templateMotifSequenceMatchBeginPositionP24077493 ;
      faldo:reference isoform:P24077-1 .
    ?templateMotifSequenceProfileAlignmentOperationP24077499 edam:has_input signature:MF_01436 ;
      rdf:type edam:operation_0300 .
    ?targetMotifMatch500 faldo:location ?targetMotifMatchRegionMatch501 ;
      edam:is_output_of ?targetMotifSequenceAlignmentOperationMF_01436503 ;
      rdf:type edam:data_0869 ;
      rdf:value ?targetMotifMatchCigarP24077MF_01436494 .
    ?targetMotifMatchRegionMatch501 faldo:begin ?targetMotifMatchRegionMatchBeginMF_01436502 .
    ?targetMotifMatchRegionMatchBeginMF_01436502 faldo:position ?targetMotifMatchRegionMatchBeginPositionMF_01436495 ;
      faldo:reference ?thisSequence .
    ?targetMotifSequenceAlignmentOperationMF_01436503 edam:has_input signature:MF_01436 ;
      rdf:type edam:operation_0300 .
    BIND(STRLEN(REPLACE(SUBSTR(?templateMotifCigarP24077MF_01436492, 1, (STRLEN(?templateMotifCigarP24077MF_01436492) - STRLEN(REPLACE(?templateMotifCigarP24077MF_01436492, CONCAT('^(?:-*[^-]){', STR(((337 - ?templateMotifSequenceMatchBeginPositionP24077493) + 1)), '}'), '')))), '[a-z]', '')) AS ?step1504) .
    BIND((STRLEN(SUBSTR(?targetMotifMatchCigarP24077MF_01436494, 1, (STRLEN(?targetMotifMatchCigarP24077MF_01436494) - STRLEN(REPLACE(?targetMotifMatchCigarP24077MF_01436494, CONCAT('^(?:[a-z]*(?:[A-Z]|-)){', STR(?step1504), '}'), ''))))) - STRLEN(REPLACE(SUBSTR(?targetMotifMatchCigarP24077MF_01436494, 1, (STRLEN(?targetMotifMatchCigarP24077MF_01436494) - STRLEN(REPLACE(?targetMotifMatchCigarP24077MF_01436494, CONCAT('^(?:[a-z]*(?:[A-Z]|-)){', STR(?step1504), '}'), '')))), '[^-]', ''))) AS ?step2505) .
    BIND(((?step2505 + ?targetMotifMatchRegionMatchBeginPositionMF_01436495) - 1) AS ?thisPositionOn130) .
    BIND(STRLEN(REPLACE(SUBSTR(?templateMotifCigarP24077MF_01436492, 1, (STRLEN(?templateMotifCigarP24077MF_01436492) - STRLEN(REPLACE(?templateMotifCigarP24077MF_01436492, CONCAT('^(?:-*[^-]){', STR(((356 - ?templateMotifSequenceMatchBeginPositionP24077493) + 1)), '}'), '')))), '[a-z]', '')) AS ?step1506) .
    BIND((STRLEN(SUBSTR(?targetMotifMatchCigarP24077MF_01436494, 1, (STRLEN(?targetMotifMatchCigarP24077MF_01436494) - STRLEN(REPLACE(?targetMotifMatchCigarP24077MF_01436494, CONCAT('^(?:[a-z]*(?:[A-Z]|-)){', STR(?step1506), '}'), ''))))) - STRLEN(REPLACE(SUBSTR(?targetMotifMatchCigarP24077MF_01436494, 1, (STRLEN(?targetMotifMatchCigarP24077MF_01436494) - STRLEN(REPLACE(?targetMotifMatchCigarP24077MF_01436494, CONCAT('^(?:[a-z]*(?:[A-Z]|-)){', STR(?step1506), '}'), '')))), '[^-]', ''))) AS ?step2507) .
    BIND(((?step2507 + ?targetMotifMatchRegionMatchBeginPositionMF_01436495) - 1) AS ?thisPositionOn131) .
    BIND(?this AS ?pfs1t508) .
    BIND(URI(CONCAT(STR(?thisSequence), '#position', STR(?thisPositionOn130))) AS ?pfsb128) .
    BIND(URI(CONCAT(STR(?thisSequence), '#position', STR(?thisPositionOn131))) AS ?pfse129) .
    FILTER ((BOUND(?thisPositionOn130) && BOUND(?thisPositionOn131))) .
    BIND(URI(CONCAT(STR(?this), '#MF_01436a127')) AS ?annotation127) .
    BIND(?this AS ?pfs126) .
  }
  OPTIONAL {
    ?this up:sequence ?thisSequence .
    ?thisSequence rdf:value ?thisSequenceValue .
    ?templateMotifMatch513 faldo:location ?templateMotifSequenceMatchRegionP24077514 ;
      edam:is_output_of ?templateMotifSequenceProfileAlignmentOperationP24077516 ;
      rdf:type edam:data_0869 ;
      rdf:value ?templateMotifCigarP24077MF_01436509 .
    ?templateMotifSequenceMatchRegionP24077514 faldo:begin ?templateMotifSequenceMatchBeginP24077515 .
    ?templateMotifSequenceMatchBeginP24077515 faldo:position ?templateMotifSequenceMatchBeginPositionP24077510 ;
      faldo:reference isoform:P24077-1 .
    ?templateMotifSequenceProfileAlignmentOperationP24077516 edam:has_input signature:MF_01436 ;
      rdf:type edam:operation_0300 .
    ?targetMotifMatch517 faldo:location ?targetMotifMatchRegionMatch518 ;
      edam:is_output_of ?targetMotifSequenceAlignmentOperationMF_01436520 ;
      rdf:type edam:data_0869 ;
      rdf:value ?targetMotifMatchCigarP24077MF_01436511 .
    ?targetMotifMatchRegionMatch518 faldo:begin ?targetMotifMatchRegionMatchBeginMF_01436519 .
    ?targetMotifMatchRegionMatchBeginMF_01436519 faldo:position ?targetMotifMatchRegionMatchBeginPositionMF_01436512 ;
      faldo:reference ?thisSequence .
    ?targetMotifSequenceAlignmentOperationMF_01436520 edam:has_input signature:MF_01436 ;
      rdf:type edam:operation_0300 .
    BIND(STRLEN(REPLACE(SUBSTR(?templateMotifCigarP24077MF_01436509, 1, (STRLEN(?templateMotifCigarP24077MF_01436509) - STRLEN(REPLACE(?templateMotifCigarP24077MF_01436509, CONCAT('^(?:-*[^-]){', STR(((357 - ?templateMotifSequenceMatchBeginPositionP24077510) + 1)), '}'), '')))), '[a-z]', '')) AS ?step1521) .
    BIND((STRLEN(SUBSTR(?targetMotifMatchCigarP24077MF_01436511, 1, (STRLEN(?targetMotifMatchCigarP24077MF_01436511) - STRLEN(REPLACE(?targetMotifMatchCigarP24077MF_01436511, CONCAT('^(?:[a-z]*(?:[A-Z]|-)){', STR(?step1521), '}'), ''))))) - STRLEN(REPLACE(SUBSTR(?targetMotifMatchCigarP24077MF_01436511, 1, (STRLEN(?targetMotifMatchCigarP24077MF_01436511) - STRLEN(REPLACE(?targetMotifMatchCigarP24077MF_01436511, CONCAT('^(?:[a-z]*(?:[A-Z]|-)){', STR(?step1521), '}'), '')))), '[^-]', ''))) AS ?step2522) .
    BIND(((?step2522 + ?targetMotifMatchRegionMatchBeginPositionMF_01436512) - 1) AS ?thisPositionOn136) .
    BIND(STRLEN(REPLACE(SUBSTR(?templateMotifCigarP24077MF_01436509, 1, (STRLEN(?templateMotifCigarP24077MF_01436509) - STRLEN(REPLACE(?templateMotifCigarP24077MF_01436509, CONCAT('^(?:-*[^-]){', STR(((377 - ?templateMotifSequenceMatchBeginPositionP24077510) + 1)), '}'), '')))), '[a-z]', '')) AS ?step1523) .
    BIND((STRLEN(SUBSTR(?targetMotifMatchCigarP24077MF_01436511, 1, (STRLEN(?targetMotifMatchCigarP24077MF_01436511) - STRLEN(REPLACE(?targetMotifMatchCigarP24077MF_01436511, CONCAT('^(?:[a-z]*(?:[A-Z]|-)){', STR(?step1523), '}'), ''))))) - STRLEN(REPLACE(SUBSTR(?targetMotifMatchCigarP24077MF_01436511, 1, (STRLEN(?targetMotifMatchCigarP24077MF_01436511) - STRLEN(REPLACE(?targetMotifMatchCigarP24077MF_01436511, CONCAT('^(?:[a-z]*(?:[A-Z]|-)){', STR(?step1523), '}'), '')))), '[^-]', ''))) AS ?step2524) .
    BIND(((?step2524 + ?targetMotifMatchRegionMatchBeginPositionMF_01436512) - 1) AS ?thisPositionOn137) .
    BIND(?this AS ?pfs1t525) .
    BIND(URI(CONCAT(STR(?thisSequence), '#position', STR(?thisPositionOn136))) AS ?pfsb134) .
    BIND(URI(CONCAT(STR(?thisSequence), '#position', STR(?thisPositionOn137))) AS ?pfse135) .
    FILTER ((BOUND(?thisPositionOn136) && BOUND(?thisPositionOn137))) .
    BIND(URI(CONCAT(STR(?this), '#MF_01436a133')) AS ?annotation133) .
    BIND(?this AS ?pfs132) .
  }
  OPTIONAL {
    ?this up:sequence ?thisSequence .
    ?thisSequence rdf:value ?thisSequenceValue .
    ?templateMotifMatch530 faldo:location ?templateMotifSequenceMatchRegionP24077531 ;
      edam:is_output_of ?templateMotifSequenceProfileAlignmentOperationP24077533 ;
      rdf:type edam:data_0869 ;
      rdf:value ?templateMotifCigarP24077MF_01436526 .
    ?templateMotifSequenceMatchRegionP24077531 faldo:begin ?templateMotifSequenceMatchBeginP24077532 .
    ?templateMotifSequenceMatchBeginP24077532 faldo:position ?templateMotifSequenceMatchBeginPositionP24077527 ;
      faldo:reference isoform:P24077-1 .
    ?templateMotifSequenceProfileAlignmentOperationP24077533 edam:has_input signature:MF_01436 ;
      rdf:type edam:operation_0300 .
    ?targetMotifMatch534 faldo:location ?targetMotifMatchRegionMatch535 ;
      edam:is_output_of ?targetMotifSequenceAlignmentOperationMF_01436537 ;
      rdf:type edam:data_0869 ;
      rdf:value ?targetMotifMatchCigarP24077MF_01436528 .
    ?targetMotifMatchRegionMatch535 faldo:begin ?targetMotifMatchRegionMatchBeginMF_01436536 .
    ?targetMotifMatchRegionMatchBeginMF_01436536 faldo:position ?targetMotifMatchRegionMatchBeginPositionMF_01436529 ;
      faldo:reference ?thisSequence .
    ?targetMotifSequenceAlignmentOperationMF_01436537 edam:has_input signature:MF_01436 ;
      rdf:type edam:operation_0300 .
    BIND(STRLEN(REPLACE(SUBSTR(?templateMotifCigarP24077MF_01436526, 1, (STRLEN(?templateMotifCigarP24077MF_01436526) - STRLEN(REPLACE(?templateMotifCigarP24077MF_01436526, CONCAT('^(?:-*[^-]){', STR(((378 - ?templateMotifSequenceMatchBeginPositionP24077527) + 1)), '}'), '')))), '[a-z]', '')) AS ?step1538) .
    BIND((STRLEN(SUBSTR(?targetMotifMatchCigarP24077MF_01436528, 1, (STRLEN(?targetMotifMatchCigarP24077MF_01436528) - STRLEN(REPLACE(?targetMotifMatchCigarP24077MF_01436528, CONCAT('^(?:[a-z]*(?:[A-Z]|-)){', STR(?step1538), '}'), ''))))) - STRLEN(REPLACE(SUBSTR(?targetMotifMatchCigarP24077MF_01436528, 1, (STRLEN(?targetMotifMatchCigarP24077MF_01436528) - STRLEN(REPLACE(?targetMotifMatchCigarP24077MF_01436528, CONCAT('^(?:[a-z]*(?:[A-Z]|-)){', STR(?step1538), '}'), '')))), '[^-]', ''))) AS ?step2539) .
    BIND(((?step2539 + ?targetMotifMatchRegionMatchBeginPositionMF_01436529) - 1) AS ?thisPositionOn142) .
    BIND(?thisPositionOn142 AS ?thisPositionOn143) .
    BIND(?this AS ?pfs1t540) .
    BIND(URI(CONCAT(STR(?thisSequence), '#position', STR(?thisPositionOn142))) AS ?pfsb140) .
    BIND(URI(CONCAT(STR(?thisSequence), '#position', STR(?thisPositionOn143))) AS ?pfse141) .
    FILTER (BOUND(?thisPositionOn142)) .
    BIND(URI(CONCAT(STR(?this), '#MF_01436a139')) AS ?annotation139) .
    BIND(?this AS ?pfs138) .
  }
  OPTIONAL {
    ?this up:sequence ?thisSequence .
    ?thisSequence rdf:value ?thisSequenceValue .
    ?templateMotifMatch545 faldo:location ?templateMotifSequenceMatchRegionP24077546 ;
      edam:is_output_of ?templateMotifSequenceProfileAlignmentOperationP24077548 ;
      rdf:type edam:data_0869 ;
      rdf:value ?templateMotifCigarP24077MF_01436541 .
    ?templateMotifSequenceMatchRegionP24077546 faldo:begin ?templateMotifSequenceMatchBeginP24077547 .
    ?templateMotifSequenceMatchBeginP24077547 faldo:position ?templateMotifSequenceMatchBeginPositionP24077542 ;
      faldo:reference isoform:P24077-1 .
    ?templateMotifSequenceProfileAlignmentOperationP24077548 edam:has_input signature:MF_01436 ;
      rdf:type edam:operation_0300 .
    ?targetMotifMatch549 faldo:location ?targetMotifMatchRegionMatch550 ;
      edam:is_output_of ?targetMotifSequenceAlignmentOperationMF_01436552 ;
      rdf:type edam:data_0869 ;
      rdf:value ?targetMotifMatchCigarP24077MF_01436543 .
    ?targetMotifMatchRegionMatch550 faldo:begin ?targetMotifMatchRegionMatchBeginMF_01436551 .
    ?targetMotifMatchRegionMatchBeginMF_01436551 faldo:position ?targetMotifMatchRegionMatchBeginPositionMF_01436544 ;
      faldo:reference ?thisSequence .
    ?targetMotifSequenceAlignmentOperationMF_01436552 edam:has_input signature:MF_01436 ;
      rdf:type edam:operation_0300 .
    BIND(STRLEN(REPLACE(SUBSTR(?templateMotifCigarP24077MF_01436541, 1, (STRLEN(?templateMotifCigarP24077MF_01436541) - STRLEN(REPLACE(?templateMotifCigarP24077MF_01436541, CONCAT('^(?:-*[^-]){', STR(((379 - ?templateMotifSequenceMatchBeginPositionP24077542) + 1)), '}'), '')))), '[a-z]', '')) AS ?step1553) .
    BIND((STRLEN(SUBSTR(?targetMotifMatchCigarP24077MF_01436543, 1, (STRLEN(?targetMotifMatchCigarP24077MF_01436543) - STRLEN(REPLACE(?targetMotifMatchCigarP24077MF_01436543, CONCAT('^(?:[a-z]*(?:[A-Z]|-)){', STR(?step1553), '}'), ''))))) - STRLEN(REPLACE(SUBSTR(?targetMotifMatchCigarP24077MF_01436543, 1, (STRLEN(?targetMotifMatchCigarP24077MF_01436543) - STRLEN(REPLACE(?targetMotifMatchCigarP24077MF_01436543, CONCAT('^(?:[a-z]*(?:[A-Z]|-)){', STR(?step1553), '}'), '')))), '[^-]', ''))) AS ?step2554) .
    BIND(((?step2554 + ?targetMotifMatchRegionMatchBeginPositionMF_01436544) - 1) AS ?thisPositionOn148) .
    BIND(STRLEN(REPLACE(SUBSTR(?templateMotifCigarP24077MF_01436541, 1, (STRLEN(?templateMotifCigarP24077MF_01436541) - STRLEN(REPLACE(?templateMotifCigarP24077MF_01436541, CONCAT('^(?:-*[^-]){', STR(((399 - ?templateMotifSequenceMatchBeginPositionP24077542) + 1)), '}'), '')))), '[a-z]', '')) AS ?step1555) .
    BIND((STRLEN(SUBSTR(?targetMotifMatchCigarP24077MF_01436543, 1, (STRLEN(?targetMotifMatchCigarP24077MF_01436543) - STRLEN(REPLACE(?targetMotifMatchCigarP24077MF_01436543, CONCAT('^(?:[a-z]*(?:[A-Z]|-)){', STR(?step1555), '}'), ''))))) - STRLEN(REPLACE(SUBSTR(?targetMotifMatchCigarP24077MF_01436543, 1, (STRLEN(?targetMotifMatchCigarP24077MF_01436543) - STRLEN(REPLACE(?targetMotifMatchCigarP24077MF_01436543, CONCAT('^(?:[a-z]*(?:[A-Z]|-)){', STR(?step1555), '}'), '')))), '[^-]', ''))) AS ?step2556) .
    BIND(((?step2556 + ?targetMotifMatchRegionMatchBeginPositionMF_01436544) - 1) AS ?thisPositionOn149) .
    BIND(?this AS ?pfs1t557) .
    BIND(URI(CONCAT(STR(?thisSequence), '#position', STR(?thisPositionOn148))) AS ?pfsb146) .
    BIND(URI(CONCAT(STR(?thisSequence), '#position', STR(?thisPositionOn149))) AS ?pfse147) .
    FILTER ((BOUND(?thisPositionOn148) && BOUND(?thisPositionOn149))) .
    BIND(URI(CONCAT(STR(?this), '#MF_01436a145')) AS ?annotation145) .
    BIND(?this AS ?pfs144) .
  }
  OPTIONAL {
    ?this up:sequence ?thisSequence .
    ?thisSequence rdf:value ?thisSequenceValue .
    ?templateMotifMatch562 faldo:location ?templateMotifSequenceMatchRegionP24077563 ;
      edam:is_output_of ?templateMotifSequenceProfileAlignmentOperationP24077565 ;
      rdf:type edam:data_0869 ;
      rdf:value ?templateMotifCigarP24077MF_01436558 .
    ?templateMotifSequenceMatchRegionP24077563 faldo:begin ?templateMotifSequenceMatchBeginP24077564 .
    ?templateMotifSequenceMatchBeginP24077564 faldo:position ?templateMotifSequenceMatchBeginPositionP24077559 ;
      faldo:reference isoform:P24077-1 .
    ?templateMotifSequenceProfileAlignmentOperationP24077565 edam:has_input signature:MF_01436 ;
      rdf:type edam:operation_0300 .
    ?targetMotifMatch566 faldo:location ?targetMotifMatchRegionMatch567 ;
      edam:is_output_of ?targetMotifSequenceAlignmentOperationMF_01436569 ;
      rdf:type edam:data_0869 ;
      rdf:value ?targetMotifMatchCigarP24077MF_01436560 .
    ?targetMotifMatchRegionMatch567 faldo:begin ?targetMotifMatchRegionMatchBeginMF_01436568 .
    ?targetMotifMatchRegionMatchBeginMF_01436568 faldo:position ?targetMotifMatchRegionMatchBeginPositionMF_01436561 ;
      faldo:reference ?thisSequence .
    ?targetMotifSequenceAlignmentOperationMF_01436569 edam:has_input signature:MF_01436 ;
      rdf:type edam:operation_0300 .
    BIND(STRLEN(REPLACE(SUBSTR(?templateMotifCigarP24077MF_01436558, 1, (STRLEN(?templateMotifCigarP24077MF_01436558) - STRLEN(REPLACE(?templateMotifCigarP24077MF_01436558, CONCAT('^(?:-*[^-]){', STR(((400 - ?templateMotifSequenceMatchBeginPositionP24077559) + 1)), '}'), '')))), '[a-z]', '')) AS ?step1570) .
    BIND((STRLEN(SUBSTR(?targetMotifMatchCigarP24077MF_01436560, 1, (STRLEN(?targetMotifMatchCigarP24077MF_01436560) - STRLEN(REPLACE(?targetMotifMatchCigarP24077MF_01436560, CONCAT('^(?:[a-z]*(?:[A-Z]|-)){', STR(?step1570), '}'), ''))))) - STRLEN(REPLACE(SUBSTR(?targetMotifMatchCigarP24077MF_01436560, 1, (STRLEN(?targetMotifMatchCigarP24077MF_01436560) - STRLEN(REPLACE(?targetMotifMatchCigarP24077MF_01436560, CONCAT('^(?:[a-z]*(?:[A-Z]|-)){', STR(?step1570), '}'), '')))), '[^-]', ''))) AS ?step2571) .
    BIND(((?step2571 + ?targetMotifMatchRegionMatchBeginPositionMF_01436561) - 1) AS ?thisPositionOn154) .
    BIND(STRLEN(?thisSequenceValue) AS ?thisPositionOn155) .
    BIND(?this AS ?pfs1t572) .
    BIND(URI(CONCAT(STR(?thisSequence), '#position', STR(?thisPositionOn154))) AS ?pfsb152) .
    BIND(URI(CONCAT(STR(?thisSequence), '#position', STR(?thisPositionOn155))) AS ?pfse153) .
    FILTER ((BOUND(?thisPositionOn154) && BOUND(?thisPositionOn155))) .
    BIND(URI(CONCAT(STR(?this), '#MF_01436a151')) AS ?annotation151) .
    BIND(?this AS ?pfs150) .
  }
}
""" .

<http://purl.uniprot.org/unirules/MF_01436> <http://www.w3.org/ns/shacl#rule> <http://purl.uniprot.org/unirules/MF_01436#construct> .