CONSTRUCT { _:524522 up:source unirule:MF_01447 . _:524523 up:ecName '2.3.1.234' ; up:fullName 'tRNA N6-adenosine threonylcarbamoyltransferase' ; rdf:type up:Structured_Name . _:524524 up:fullName 'tRNA threonylcarbamoyladenosine biosynthesis protein Kae1' ; rdf:type up:Structured_Name . _:524525 up:fullName 't(6)A37 threonylcarbamoyladenosine biosynthesis protein Kae1' ; rdf:type up:Structured_Name . _:524526 up:source unirule:MF_01447 . _:524527 up:ecName '2.7.11.1' ; up:fullName 'Serine/threonine-protein kinase Bud32' ; rdf:type up:Structured_Name . _:524528 up:source unirule:MF_01447 . _:524529 up:source unirule:MF_01447 . _:524530 up:source unirule:MF_01447 . _:524531 up:source unirule:MF_01447 . _:524532 up:source unirule:MF_01447 . _:524533 up:source unirule:MF_01447 . _:524534 up:source unirule:MF_01447 . _:524535 up:source unirule:MF_01447 . _:524536 up:source unirule:MF_01447 . _:524537 up:source unirule:MF_01447 . _:524538 up:source unirule:MF_01447 . _:524539 up:source unirule:MF_01447 . _:524540 up:source unirule:MF_01447 . _:524541 up:source unirule:MF_01447 . _:524542 up:source unirule:MF_01447 . _:524543 up:source unirule:MF_01447 . _:524544 up:source unirule:MF_01447 . _:524545 up:source unirule:MF_01447 . _:524546 up:source unirule:MF_01447 . _:524547 up:source unirule:MF_01447 . _:524548 up:source unirule:MF_01447 . _:524549 up:source unirule:MF_01447 . _:524550 up:source unirule:MF_01447 . _:524551 up:source unirule:MF_01447 . _:524552 up:source unirule:MF_01447 . _:524553 up:source unirule:MF_01447 . _:524554 up:source unirule:MF_01447 . _:524555 up:source unirule:MF_01447 . _:524556 up:source unirule:MF_01447 . _:524557 up:source unirule:MF_01447 . _:524558 up:source unirule:MF_01447 . _:524559 up:source unirule:MF_01447 . _:524560 up:source unirule:MF_01447 . _:524561 up:source unirule:MF_01447 . _:524562 up:source unirule:MF_01447 . _:524563 up:source unirule:MF_01447 . _:524564 up:source unirule:MF_01447 . _:524565 up:source unirule:MF_01447 . _:524566 up:source unirule:MF_01447 . _:524567 up:source unirule:MF_01447 . _:524568 up:source unirule:MF_01447 . ?this up:annotation ?annotation3 , ?annotation4 , ?annotation6 , ?annotation8 , ?annotation10 , ?annotation11 , ?annotation12 , ?annotation14 , ?annotation15 ; up:classifiedWith GO:0002949 , GO:0004712 , GO:0005506 , GO:0005524 , GO:0005737 , GO:0016747 , keyword:12 , keyword:408 , keyword:418 , keyword:479 , keyword:511 , keyword:547 , keyword:67 , keyword:723 , keyword:808 , keyword:819 , keyword:963 ; up:domain ?namedpart1 , ?namedpart2 ; up:recommendedName ?name0 . ?name0 up:fullName 'Probable bifunctional tRNA threonylcarbamoyladenosine biosynthesis protein' ; rdf:type up:Structured_Name . ?namedpart1 up:alternativeName _:524524 , _:524525 ; up:recommendedName _:524523 . ?namedpart2 up:recommendedName _:524527 . ?annotation3 a up:Function_Annotation ; rdfs:comment 'Required for the formation of a threonylcarbamoyl group on adenosine at position 37 (t(6)A37) in tRNAs that read codons beginning with adenine. Is a component of the KEOPS complex that is probably involved in the transfer of the threonylcarbamoyl moiety of threonylcarbamoyl-AMP (TC-AMP) to the N6 group of A37. The Kae1 domain likely plays a direct catalytic role in this reaction. The Bud32 domain probably displays kinase activity that regulates Kae1 function.' . ?annotation4 up:activity ?activity5 ; rdf:type up:Catalytic_Activity_Annotation . ?activity5 up:catalyticActivity <http://rdf.rhea-db.org/37059>; up:enzymeClass <http://purl.uniprot.org/enzyme/2.3.1.234>. ?annotation6 up:activity ?activity7 ; rdf:type up:Catalytic_Activity_Annotation . ?activity7 up:catalyticActivity <http://rdf.rhea-db.org/17989>; up:enzymeClass <http://purl.uniprot.org/enzyme/2.7.11.1>. ?annotation8 up:activity ?activity9 ; rdf:type up:Catalytic_Activity_Annotation . ?activity9 up:catalyticActivity <http://rdf.rhea-db.org/46608>; up:enzymeClass <http://purl.uniprot.org/enzyme/2.7.11.1>. ?annotation10 up:cofactor chebi:29033 ; rdf:type up:Cofactor_Annotation ; rdfs:comment 'Binds 1 Fe(2+) ion per subunit.' . ?annotation11 a up:Subunit_Annotation ; rdfs:comment 'Component of the KEOPS complex that consists of Kae1, Bud32, Cgi121 and Pcc1; the whole complex dimerizes.' . ?annotation12 a up:Subcellular_Location_Annotation . ?annotation12li13 up:cellularComponent <http://purl.uniprot.org/locations/null>. ?annotation14 a up:Similarity_Annotation ; rdfs:comment 'In the N-terminal section; belongs to the KAE1 / TsaD family.' . ?annotation15 a up:Similarity_Annotation ; rdfs:comment 'In the C-terminal section; belongs to the protein kinase superfamily. Tyr protein kinase family. BUD32 subfamily.' . ?pfs16 up:annotation ?annotation17 . ?annotation17 faldo:begin ?pfsb18 ; faldo:end ?pfse19 ; rdf:type up:Domain_Extent_Annotation ; rdfs:comment 'Protein kinase' . ?pfsb18 faldo:position ?thisPositionOn20 ; rdf:type faldo:ExactPosition . ?pfse19 faldo:position ?thisPositionOn21 ; rdf:type faldo:ExactPosition . ?pfs22 up:annotation ?annotation23 . ?annotation23 faldo:begin ?pfsb24 ; faldo:end ?pfse25 ; up:ligand ?ligand26 ; rdf:type up:Binding_Site_Annotation . ?pfsb24 faldo:position ?thisPositionOn27 ; rdf:type faldo:ExactPosition . ?pfse25 faldo:position ?thisPositionOn28 ; rdf:type faldo:ExactPosition . ?ligand26 rdfs:subClassOf chebi:30616 . ?pfs29 up:annotation ?annotation30 . ?annotation30 faldo:begin ?pfsb31 ; faldo:end ?pfse32 ; rdf:type up:Region_Annotation ; rdfs:comment 'Kae1' . ?pfsb31 faldo:position ?thisPositionOn33 ; rdf:type faldo:ExactPosition . ?pfse32 faldo:position ?thisPositionOn34 ; rdf:type faldo:ExactPosition . ?pfs35 up:annotation ?annotation36 . ?annotation36 faldo:begin ?pfsb37 ; faldo:end ?pfse38 ; rdf:type up:Active_Site_Annotation ; rdfs:comment 'Proton acceptor; for kinase activity' . ?pfsb37 faldo:position ?thisPositionOn39 ; rdf:type faldo:ExactPosition . ?pfse38 faldo:position ?thisPositionOn40 ; rdf:type faldo:ExactPosition . ?pfs41 up:annotation ?annotation42 . ?annotation42 faldo:begin ?pfsb43 ; faldo:end ?pfse44 ; up:ligand ?ligand45 ; rdf:type up:Binding_Site_Annotation . ?pfsb43 faldo:position ?thisPositionOn46 ; rdf:type faldo:ExactPosition . ?pfse44 faldo:position ?thisPositionOn47 ; rdf:type faldo:ExactPosition . ?ligand45 rdfs:subClassOf chebi:73682 . ?pfs48 up:annotation ?annotation49 . ?annotation49 faldo:begin ?pfsb50 ; faldo:end ?pfse51 ; up:ligand ?ligand52 ; rdf:type up:Binding_Site_Annotation . ?pfsb50 faldo:position ?thisPositionOn53 ; rdf:type faldo:ExactPosition . ?pfse51 faldo:position ?thisPositionOn54 ; rdf:type faldo:ExactPosition . ?ligand52 rdfs:subClassOf chebi:24875 . ?pfs55 up:annotation ?annotation56 . ?annotation56 faldo:begin ?pfsb57 ; faldo:end ?pfse58 ; up:ligand ?ligand59 ; rdf:type up:Binding_Site_Annotation . ?pfsb57 faldo:position ?thisPositionOn60 ; rdf:type faldo:ExactPosition . ?pfse58 faldo:position ?thisPositionOn61 ; rdf:type faldo:ExactPosition . ?ligand59 rdfs:subClassOf chebi:24875 . ?pfs62 up:annotation ?annotation63 . ?annotation63 faldo:begin ?pfsb64 ; faldo:end ?pfse65 ; up:ligand ?ligand66 ; rdf:type up:Binding_Site_Annotation . ?pfsb64 faldo:position ?thisPositionOn67 ; rdf:type faldo:ExactPosition . ?pfse65 faldo:position ?thisPositionOn68 ; rdf:type faldo:ExactPosition . ?ligand66 rdfs:subClassOf chebi:24875 . ?pfs69 up:annotation ?annotation70 . ?annotation70 faldo:begin ?pfsb71 ; faldo:end ?pfse72 ; up:ligand ?ligand73 ; rdf:type up:Binding_Site_Annotation . ?pfsb71 faldo:position ?thisPositionOn74 ; rdf:type faldo:ExactPosition . ?pfse72 faldo:position ?thisPositionOn75 ; rdf:type faldo:ExactPosition . ?ligand73 rdfs:subClassOf chebi:24875 . ?pfs76 up:annotation ?annotation77 . ?annotation77 faldo:begin ?pfsb78 ; faldo:end ?pfse79 ; up:ligand ?ligand80 ; rdf:type up:Binding_Site_Annotation . ?pfsb78 faldo:position ?thisPositionOn81 ; rdf:type faldo:ExactPosition . ?pfse79 faldo:position ?thisPositionOn82 ; rdf:type faldo:ExactPosition . ?ligand80 rdfs:subClassOf chebi:73682 . ?pfs83 up:annotation ?annotation84 . ?annotation84 faldo:begin ?pfsb85 ; faldo:end ?pfse86 ; up:ligand ?ligand87 ; rdf:type up:Binding_Site_Annotation . ?pfsb85 faldo:position ?thisPositionOn88 ; rdf:type faldo:ExactPosition . ?pfse86 faldo:position ?thisPositionOn89 ; rdf:type faldo:ExactPosition . ?ligand87 rdfs:subClassOf chebi:73682 . ?pfs90 up:annotation ?annotation91 . ?annotation91 faldo:begin ?pfsb92 ; faldo:end ?pfse93 ; up:ligand ?ligand94 ; rdf:type up:Binding_Site_Annotation . ?pfsb92 faldo:position ?thisPositionOn95 ; rdf:type faldo:ExactPosition . ?pfse93 faldo:position ?thisPositionOn96 ; rdf:type faldo:ExactPosition . ?ligand94 rdfs:subClassOf chebi:73682 . ?pfs97 up:annotation ?annotation98 . ?annotation98 faldo:begin ?pfsb99 ; faldo:end ?pfse100 ; up:ligand ?ligand101 ; rdf:type up:Binding_Site_Annotation . ?pfsb99 faldo:position ?thisPositionOn102 ; rdf:type faldo:ExactPosition . ?pfse100 faldo:position ?thisPositionOn103 ; rdf:type faldo:ExactPosition . ?ligand101 rdfs:subClassOf chebi:73682 . ?pfs104 up:annotation ?annotation105 . ?annotation105 faldo:begin ?pfsb106 ; faldo:end ?pfse107 ; up:ligand ?ligand108 ; rdf:type up:Binding_Site_Annotation . ?pfsb106 faldo:position ?thisPositionOn109 ; rdf:type faldo:ExactPosition . ?pfse107 faldo:position ?thisPositionOn110 ; rdf:type faldo:ExactPosition . ?ligand108 rdfs:subClassOf chebi:30616 . _:524569 a rdf:Statement ; up:attribution _:524522 ; rdf:subject ?this ; rdf:predicate up:recommendedName ; rdf:object ?name0 . _:524570 a rdf:Statement ; up:attribution _:524526 ; rdf:subject ?this ; rdf:predicate up:domain ; rdf:object ?namedpart1 . _:524571 a rdf:Statement ; up:attribution _:524528 ; rdf:subject ?this ; rdf:predicate up:domain ; rdf:object ?namedpart2 . _:524572 a rdf:Statement ; up:attribution _:524529 ; rdf:subject ?this ; rdf:predicate up:annotation ; rdf:object ?annotation3 . _:524573 a rdf:Statement ; up:attribution _:524530 ; rdf:subject ?this ; rdf:predicate up:annotation ; rdf:object ?annotation4 . _:524574 a rdf:Statement ; up:attribution _:524531 ; rdf:subject ?this ; rdf:predicate up:annotation ; rdf:object ?annotation6 . _:524575 a rdf:Statement ; up:attribution _:524532 ; rdf:subject ?this ; rdf:predicate up:annotation ; rdf:object ?annotation8 . _:524576 a rdf:Statement ; up:attribution _:524533 ; rdf:subject ?this ; rdf:predicate up:annotation ; rdf:object ?annotation10 . _:524577 a rdf:Statement ; up:attribution _:524534 ; rdf:subject ?this ; rdf:predicate up:annotation ; rdf:object ?annotation11 . _:524578 a rdf:Statement ; up:attribution _:524535 ; rdf:subject ?this ; rdf:predicate up:annotation ; rdf:object ?annotation12 . _:524579 a rdf:Statement ; up:attribution _:524536 ; rdf:subject ?this ; rdf:predicate up:annotation ; rdf:object ?annotation14 . _:524580 a rdf:Statement ; up:attribution _:524537 ; rdf:subject ?this ; rdf:predicate up:annotation ; rdf:object ?annotation15 . _:524581 a rdf:Statement ; up:attribution _:524538 ; rdf:subject ?this ; rdf:predicate up:classifiedWith ; rdf:object keyword:12 . _:524582 a rdf:Statement ; up:attribution _:524539 ; rdf:subject ?this ; rdf:predicate up:classifiedWith ; rdf:object keyword:67 . _:524583 a rdf:Statement ; up:attribution _:524540 ; rdf:subject ?this ; rdf:predicate up:classifiedWith ; rdf:object keyword:963 . _:524584 a rdf:Statement ; up:attribution _:524541 ; rdf:subject ?this ; rdf:predicate up:classifiedWith ; rdf:object keyword:418 . _:524585 a rdf:Statement ; up:attribution _:524542 ; rdf:subject ?this ; rdf:predicate up:classifiedWith ; rdf:object keyword:547 . _:524586 a rdf:Statement ; up:attribution _:524543 ; rdf:subject ?this ; rdf:predicate up:classifiedWith ; rdf:object keyword:723 . _:524587 a rdf:Statement ; up:attribution _:524544 ; rdf:subject ?this ; rdf:predicate up:classifiedWith ; rdf:object keyword:808 . _:524588 a rdf:Statement ; up:attribution _:524545 ; rdf:subject ?this ; rdf:predicate up:classifiedWith ; rdf:object keyword:819 . _:524589 a rdf:Statement ; up:attribution _:524546 ; rdf:subject ?this ; rdf:predicate up:classifiedWith ; rdf:object keyword:408 . _:524590 a rdf:Statement ; up:attribution _:524547 ; rdf:subject ?this ; rdf:predicate up:classifiedWith ; rdf:object keyword:479 . _:524591 a rdf:Statement ; up:attribution _:524548 ; rdf:subject ?this ; rdf:predicate up:classifiedWith ; rdf:object keyword:511 . _:524592 a rdf:Statement ; up:attribution _:524549 ; rdf:subject ?this ; rdf:predicate up:classifiedWith ; rdf:object GO:0005506 . _:524593 a rdf:Statement ; up:attribution _:524550 ; rdf:subject ?this ; rdf:predicate up:classifiedWith ; rdf:object GO:0005524 . _:524594 a rdf:Statement ; up:attribution _:524551 ; rdf:subject ?this ; rdf:predicate up:classifiedWith ; rdf:object GO:0004712 . _:524595 a rdf:Statement ; up:attribution _:524552 ; rdf:subject ?this ; rdf:predicate up:classifiedWith ; rdf:object GO:0016747 . _:524596 a rdf:Statement ; up:attribution _:524553 ; rdf:subject ?this ; rdf:predicate up:classifiedWith ; rdf:object GO:0002949 . _:524597 a rdf:Statement ; up:attribution _:524554 ; rdf:subject ?this ; rdf:predicate up:classifiedWith ; rdf:object GO:0005737 . _:524598 a rdf:Statement ; up:source unirule:MF_01447 ; rdf:subject ?pfs16 ; rdf:predicate up:annotation ; rdf:object ?annotation17 . _:524599 a rdf:Statement ; up:attribution _:524555 ; rdf:subject ?pfs16 ; rdf:predicate up:annotation ; rdf:object ?annotation17 . _:524600 a rdf:Statement ; up:source unirule:MF_01447 ; rdf:subject ?pfs22 ; rdf:predicate up:annotation ; rdf:object ?annotation23 . _:524601 a rdf:Statement ; up:attribution _:524556 ; rdf:subject ?pfs22 ; rdf:predicate up:annotation ; rdf:object ?annotation23 . _:524602 a rdf:Statement ; up:source unirule:MF_01447 ; rdf:subject ?pfs29 ; rdf:predicate up:annotation ; rdf:object ?annotation30 . _:524603 a rdf:Statement ; up:attribution _:524557 ; rdf:subject ?pfs29 ; rdf:predicate up:annotation ; rdf:object ?annotation30 . _:524604 a rdf:Statement ; up:source unirule:MF_01447 ; rdf:subject ?pfs35 ; rdf:predicate up:annotation ; rdf:object ?annotation36 . _:524605 a rdf:Statement ; up:attribution _:524558 ; rdf:subject ?pfs35 ; rdf:predicate up:annotation ; rdf:object ?annotation36 . _:524606 a rdf:Statement ; up:source unirule:MF_01447 ; rdf:subject ?pfs41 ; rdf:predicate up:annotation ; rdf:object ?annotation42 . _:524607 a rdf:Statement ; up:attribution _:524559 ; rdf:subject ?pfs41 ; rdf:predicate up:annotation ; rdf:object ?annotation42 . _:524608 a rdf:Statement ; up:source unirule:MF_01447 ; rdf:subject ?pfs48 ; rdf:predicate up:annotation ; rdf:object ?annotation49 . _:524609 a rdf:Statement ; up:attribution _:524560 ; rdf:subject ?pfs48 ; rdf:predicate up:annotation ; rdf:object ?annotation49 . _:524610 a rdf:Statement ; up:source unirule:MF_01447 ; rdf:subject ?pfs55 ; rdf:predicate up:annotation ; rdf:object ?annotation56 . _:524611 a rdf:Statement ; up:attribution _:524561 ; rdf:subject ?pfs55 ; rdf:predicate up:annotation ; rdf:object ?annotation56 . _:524612 a rdf:Statement ; up:source unirule:MF_01447 ; rdf:subject ?pfs62 ; rdf:predicate up:annotation ; rdf:object ?annotation63 . _:524613 a rdf:Statement ; up:attribution _:524562 ; rdf:subject ?pfs62 ; rdf:predicate up:annotation ; rdf:object ?annotation63 . _:524614 a rdf:Statement ; up:source unirule:MF_01447 ; rdf:subject ?pfs69 ; rdf:predicate up:annotation ; rdf:object ?annotation70 . _:524615 a rdf:Statement ; up:attribution _:524563 ; rdf:subject ?pfs69 ; rdf:predicate up:annotation ; rdf:object ?annotation70 . _:524616 a rdf:Statement ; up:source unirule:MF_01447 ; rdf:subject ?pfs76 ; rdf:predicate up:annotation ; rdf:object ?annotation77 . _:524617 a rdf:Statement ; up:attribution _:524564 ; rdf:subject ?pfs76 ; rdf:predicate up:annotation ; rdf:object ?annotation77 . _:524618 a rdf:Statement ; up:source unirule:MF_01447 ; rdf:subject ?pfs83 ; rdf:predicate up:annotation ; rdf:object ?annotation84 . _:524619 a rdf:Statement ; up:attribution _:524565 ; rdf:subject ?pfs83 ; rdf:predicate up:annotation ; rdf:object ?annotation84 . _:524620 a rdf:Statement ; up:source unirule:MF_01447 ; rdf:subject ?pfs90 ; rdf:predicate up:annotation ; rdf:object ?annotation91 . _:524621 a rdf:Statement ; up:attribution _:524566 ; rdf:subject ?pfs90 ; rdf:predicate up:annotation ; rdf:object ?annotation91 . _:524622 a rdf:Statement ; up:source unirule:MF_01447 ; rdf:subject ?pfs97 ; rdf:predicate up:annotation ; rdf:object ?annotation98 . _:524623 a rdf:Statement ; up:attribution _:524567 ; rdf:subject ?pfs97 ; rdf:predicate up:annotation ; rdf:object ?annotation98 . _:524624 a rdf:Statement ; up:source unirule:MF_01447 ; rdf:subject ?pfs104 ; rdf:predicate up:annotation ; rdf:object ?annotation105 . _:524625 a rdf:Statement ; up:attribution _:524568 ; rdf:subject ?pfs104 ; rdf:predicate up:annotation ; rdf:object ?annotation105 . } WHERE { #baseURI: http://purl.uniprot.org/unirule/MF_01447 #Rule MF_01447 Created by:? on:2007-08-13 Modified by:Catherine Rivoire on:2024-10-08 ?this up:organism ?thisOrganism ; rdfs:seeAlso signature:MF_01447 . ?thisOrganism rdfs:subClassOf+ taxon:3366610 . BIND(URI(CONCAT(STR(?this), '#MF_01447a0')) AS ?name0) . BIND(URI(CONCAT(STR(?this), '#MF_01447a1')) AS ?namedpart1) . BIND(URI(CONCAT(STR(?this), '#MF_01447a2')) AS ?namedpart2) . BIND(URI(CONCAT(STR(?this), '#MF_01447a3')) AS ?annotation3) . BIND(URI(CONCAT(STR(?this), '#MF_01447a4')) AS ?annotation4) . BIND(URI(CONCAT(STR(?this), '#MF_01447a6')) AS ?annotation6) . BIND(URI(CONCAT(STR(?this), '#MF_01447a8')) AS ?annotation8) . BIND(URI(CONCAT(STR(?this), '#MF_01447a10')) AS ?annotation10) . BIND(URI(CONCAT(STR(?this), '#MF_01447a11')) AS ?annotation11) . BIND(URI(CONCAT(STR(?this), '#MF_01447a12')) AS ?annotation12) . BIND(URI(CONCAT(STR(?this), '#MF_01447a14')) AS ?annotation14) . BIND(URI(CONCAT(STR(?this), '#MF_01447a15')) AS ?annotation15) . OPTIONAL { ?this up:sequence ?thisSequence . ?thisSequence rdf:value ?thisSequenceValue . ?templateMotifMatch115 faldo:location ?templateMotifSequenceMatchRegionQ58530116 ; edam:is_output_of ?templateMotifSequenceProfileAlignmentOperationQ58530118 ; rdf:type edam:data_0869 ; rdf:value ?templateMotifCigarQ58530MF_01447111 . ?templateMotifSequenceMatchRegionQ58530116 faldo:begin ?templateMotifSequenceMatchBeginQ58530117 . ?templateMotifSequenceMatchBeginQ58530117 faldo:position ?templateMotifSequenceMatchBeginPositionQ58530112 ; faldo:reference isoform:Q58530-1 . ?templateMotifSequenceProfileAlignmentOperationQ58530118 edam:has_input signature:MF_01447 ; rdf:type edam:operation_0300 . ?targetMotifMatch119 faldo:location ?targetMotifMatchRegionMatch120 ; edam:is_output_of ?targetMotifSequenceAlignmentOperationMF_01447122 ; rdf:type edam:data_0869 ; rdf:value ?targetMotifMatchCigarQ58530MF_01447113 . ?targetMotifMatchRegionMatch120 faldo:begin ?targetMotifMatchRegionMatchBeginMF_01447121 . ?targetMotifMatchRegionMatchBeginMF_01447121 faldo:position ?targetMotifMatchRegionMatchBeginPositionMF_01447114 ; faldo:reference ?thisSequence . ?targetMotifSequenceAlignmentOperationMF_01447122 edam:has_input signature:MF_01447 ; rdf:type edam:operation_0300 . BIND(STRLEN(REPLACE(SUBSTR(?templateMotifCigarQ58530MF_01447111, 1, (STRLEN(?templateMotifCigarQ58530MF_01447111) - STRLEN(REPLACE(?templateMotifCigarQ58530MF_01447111, CONCAT('^(?:-*[^-]){', STR(((333 - ?templateMotifSequenceMatchBeginPositionQ58530112) + 1)), '}'), '')))), '[a-z]', '')) AS ?step1123) . BIND((STRLEN(SUBSTR(?targetMotifMatchCigarQ58530MF_01447113, 1, (STRLEN(?targetMotifMatchCigarQ58530MF_01447113) - STRLEN(REPLACE(?targetMotifMatchCigarQ58530MF_01447113, CONCAT('^(?:[a-z]*(?:[A-Z]|-)){', STR(?step1123), '}'), ''))))) - STRLEN(REPLACE(SUBSTR(?targetMotifMatchCigarQ58530MF_01447113, 1, (STRLEN(?targetMotifMatchCigarQ58530MF_01447113) - STRLEN(REPLACE(?targetMotifMatchCigarQ58530MF_01447113, CONCAT('^(?:[a-z]*(?:[A-Z]|-)){', STR(?step1123), '}'), '')))), '[^-]', ''))) AS ?step2124) . BIND(((?step2124 + ?targetMotifMatchRegionMatchBeginPositionMF_01447114) - 1) AS ?thisPositionOn20) . BIND(STRLEN(?thisSequenceValue) AS ?thisPositionOn21) . BIND(?this AS ?pfs1t125) . BIND(URI(CONCAT(STR(?thisSequence), '#position', STR(?thisPositionOn20))) AS ?pfsb18) . BIND(URI(CONCAT(STR(?thisSequence), '#position', STR(?thisPositionOn21))) AS ?pfse19) . FILTER ((BOUND(?thisPositionOn20) && BOUND(?thisPositionOn21))) . BIND(URI(CONCAT(STR(?this), '#MF_01447a17')) AS ?annotation17) . BIND(?this AS ?pfs16) . } OPTIONAL { ?this up:sequence ?thisSequence . ?thisSequence rdf:value ?thisSequenceValue . ?templateMotifMatch130 faldo:location ?templateMotifSequenceMatchRegionQ58530131 ; edam:is_output_of ?templateMotifSequenceProfileAlignmentOperationQ58530133 ; rdf:type edam:data_0869 ; rdf:value ?templateMotifCigarQ58530MF_01447126 . ?templateMotifSequenceMatchRegionQ58530131 faldo:begin ?templateMotifSequenceMatchBeginQ58530132 . ?templateMotifSequenceMatchBeginQ58530132 faldo:position ?templateMotifSequenceMatchBeginPositionQ58530127 ; faldo:reference isoform:Q58530-1 . ?templateMotifSequenceProfileAlignmentOperationQ58530133 edam:has_input signature:MF_01447 ; rdf:type edam:operation_0300 . ?targetMotifMatch134 faldo:location ?targetMotifMatchRegionMatch135 ; edam:is_output_of ?targetMotifSequenceAlignmentOperationMF_01447137 ; rdf:type edam:data_0869 ; rdf:value ?targetMotifMatchCigarQ58530MF_01447128 . ?targetMotifMatchRegionMatch135 faldo:begin ?targetMotifMatchRegionMatchBeginMF_01447136 . ?targetMotifMatchRegionMatchBeginMF_01447136 faldo:position ?targetMotifMatchRegionMatchBeginPositionMF_01447129 ; faldo:reference ?thisSequence . ?targetMotifSequenceAlignmentOperationMF_01447137 edam:has_input signature:MF_01447 ; rdf:type edam:operation_0300 . BIND(STRLEN(REPLACE(SUBSTR(?templateMotifCigarQ58530MF_01447126, 1, (STRLEN(?templateMotifCigarQ58530MF_01447126) - STRLEN(REPLACE(?templateMotifCigarQ58530MF_01447126, CONCAT('^(?:-*[^-]){', STR(((339 - ?templateMotifSequenceMatchBeginPositionQ58530127) + 1)), '}'), '')))), '[a-z]', '')) AS ?step1138) . BIND((STRLEN(SUBSTR(?targetMotifMatchCigarQ58530MF_01447128, 1, (STRLEN(?targetMotifMatchCigarQ58530MF_01447128) - STRLEN(REPLACE(?targetMotifMatchCigarQ58530MF_01447128, CONCAT('^(?:[a-z]*(?:[A-Z]|-)){', STR(?step1138), '}'), ''))))) - STRLEN(REPLACE(SUBSTR(?targetMotifMatchCigarQ58530MF_01447128, 1, (STRLEN(?targetMotifMatchCigarQ58530MF_01447128) - STRLEN(REPLACE(?targetMotifMatchCigarQ58530MF_01447128, CONCAT('^(?:[a-z]*(?:[A-Z]|-)){', STR(?step1138), '}'), '')))), '[^-]', ''))) AS ?step2139) . BIND(((?step2139 + ?targetMotifMatchRegionMatchBeginPositionMF_01447129) - 1) AS ?thisPositionOn27) . BIND(STRLEN(REPLACE(SUBSTR(?templateMotifCigarQ58530MF_01447126, 1, (STRLEN(?templateMotifCigarQ58530MF_01447126) - STRLEN(REPLACE(?templateMotifCigarQ58530MF_01447126, CONCAT('^(?:-*[^-]){', STR(((347 - ?templateMotifSequenceMatchBeginPositionQ58530127) + 1)), '}'), '')))), '[a-z]', '')) AS ?step1140) . BIND((STRLEN(SUBSTR(?targetMotifMatchCigarQ58530MF_01447128, 1, (STRLEN(?targetMotifMatchCigarQ58530MF_01447128) - STRLEN(REPLACE(?targetMotifMatchCigarQ58530MF_01447128, CONCAT('^(?:[a-z]*(?:[A-Z]|-)){', STR(?step1140), '}'), ''))))) - STRLEN(REPLACE(SUBSTR(?targetMotifMatchCigarQ58530MF_01447128, 1, (STRLEN(?targetMotifMatchCigarQ58530MF_01447128) - STRLEN(REPLACE(?targetMotifMatchCigarQ58530MF_01447128, CONCAT('^(?:[a-z]*(?:[A-Z]|-)){', STR(?step1140), '}'), '')))), '[^-]', ''))) AS ?step2141) . BIND(((?step2141 + ?targetMotifMatchRegionMatchBeginPositionMF_01447129) - 1) AS ?thisPositionOn28) . BIND(?this AS ?pfs1t142) . BIND(URI(CONCAT(STR(?thisSequence), '#position', STR(?thisPositionOn27))) AS ?pfsb24) . BIND(URI(CONCAT(STR(?thisSequence), '#position', STR(?thisPositionOn28))) AS ?pfse25) . FILTER ((BOUND(?thisPositionOn27) && BOUND(?thisPositionOn28))) . BIND(URI(CONCAT(STR(?this), '#MF_01447a23')) AS ?annotation23) . BIND(?this AS ?pfs22) . } OPTIONAL { ?this up:sequence ?thisSequence . ?thisSequence rdf:value ?thisSequenceValue . ?templateMotifMatch147 faldo:location ?templateMotifSequenceMatchRegionQ58530148 ; edam:is_output_of ?templateMotifSequenceProfileAlignmentOperationQ58530150 ; rdf:type edam:data_0869 ; rdf:value ?templateMotifCigarQ58530MF_01447143 . ?templateMotifSequenceMatchRegionQ58530148 faldo:begin ?templateMotifSequenceMatchBeginQ58530149 . ?templateMotifSequenceMatchBeginQ58530149 faldo:position ?templateMotifSequenceMatchBeginPositionQ58530144 ; faldo:reference isoform:Q58530-1 . ?templateMotifSequenceProfileAlignmentOperationQ58530150 edam:has_input signature:MF_01447 ; rdf:type edam:operation_0300 . ?targetMotifMatch151 faldo:location ?targetMotifMatchRegionMatch152 ; edam:is_output_of ?targetMotifSequenceAlignmentOperationMF_01447154 ; rdf:type edam:data_0869 ; rdf:value ?targetMotifMatchCigarQ58530MF_01447145 . ?targetMotifMatchRegionMatch152 faldo:begin ?targetMotifMatchRegionMatchBeginMF_01447153 . ?targetMotifMatchRegionMatchBeginMF_01447153 faldo:position ?targetMotifMatchRegionMatchBeginPositionMF_01447146 ; faldo:reference ?thisSequence . ?targetMotifSequenceAlignmentOperationMF_01447154 edam:has_input signature:MF_01447 ; rdf:type edam:operation_0300 . BIND(1 AS ?thisPositionOn33) . BIND(STRLEN(REPLACE(SUBSTR(?templateMotifCigarQ58530MF_01447143, 1, (STRLEN(?templateMotifCigarQ58530MF_01447143) - STRLEN(REPLACE(?templateMotifCigarQ58530MF_01447143, CONCAT('^(?:-*[^-]){', STR(((323 - ?templateMotifSequenceMatchBeginPositionQ58530144) + 1)), '}'), '')))), '[a-z]', '')) AS ?step1155) . BIND((STRLEN(SUBSTR(?targetMotifMatchCigarQ58530MF_01447145, 1, (STRLEN(?targetMotifMatchCigarQ58530MF_01447145) - STRLEN(REPLACE(?targetMotifMatchCigarQ58530MF_01447145, CONCAT('^(?:[a-z]*(?:[A-Z]|-)){', STR(?step1155), '}'), ''))))) - STRLEN(REPLACE(SUBSTR(?targetMotifMatchCigarQ58530MF_01447145, 1, (STRLEN(?targetMotifMatchCigarQ58530MF_01447145) - STRLEN(REPLACE(?targetMotifMatchCigarQ58530MF_01447145, CONCAT('^(?:[a-z]*(?:[A-Z]|-)){', STR(?step1155), '}'), '')))), '[^-]', ''))) AS ?step2156) . BIND(((?step2156 + ?targetMotifMatchRegionMatchBeginPositionMF_01447146) - 1) AS ?thisPositionOn34) . BIND(?this AS ?pfs1t157) . BIND(URI(CONCAT(STR(?thisSequence), '#position', STR(?thisPositionOn33))) AS ?pfsb31) . BIND(URI(CONCAT(STR(?thisSequence), '#position', STR(?thisPositionOn34))) AS ?pfse32) . FILTER ((BOUND(?thisPositionOn33) && BOUND(?thisPositionOn34))) . BIND(URI(CONCAT(STR(?this), '#MF_01447a30')) AS ?annotation30) . BIND(?this AS ?pfs29) . } OPTIONAL { ?this up:sequence ?thisSequence . ?thisSequence rdf:value ?thisSequenceValue . ?templateMotifMatch162 faldo:location ?templateMotifSequenceMatchRegionQ58530163 ; edam:is_output_of ?templateMotifSequenceProfileAlignmentOperationQ58530165 ; rdf:type edam:data_0869 ; rdf:value ?templateMotifCigarQ58530MF_01447158 . ?templateMotifSequenceMatchRegionQ58530163 faldo:begin ?templateMotifSequenceMatchBeginQ58530164 . ?templateMotifSequenceMatchBeginQ58530164 faldo:position ?templateMotifSequenceMatchBeginPositionQ58530159 ; faldo:reference isoform:Q58530-1 . ?templateMotifSequenceProfileAlignmentOperationQ58530165 edam:has_input signature:MF_01447 ; rdf:type edam:operation_0300 . ?targetMotifMatch166 faldo:location ?targetMotifMatchRegionMatch167 ; edam:is_output_of ?targetMotifSequenceAlignmentOperationMF_01447169 ; rdf:type edam:data_0869 ; rdf:value ?targetMotifMatchCigarQ58530MF_01447160 . ?targetMotifMatchRegionMatch167 faldo:begin ?targetMotifMatchRegionMatchBeginMF_01447168 . ?targetMotifMatchRegionMatchBeginMF_01447168 faldo:position ?targetMotifMatchRegionMatchBeginPositionMF_01447161 ; faldo:reference ?thisSequence . ?targetMotifSequenceAlignmentOperationMF_01447169 edam:has_input signature:MF_01447 ; rdf:type edam:operation_0300 . BIND(STRLEN(REPLACE(SUBSTR(?templateMotifCigarQ58530MF_01447158, 1, (STRLEN(?templateMotifCigarQ58530MF_01447158) - STRLEN(REPLACE(?templateMotifCigarQ58530MF_01447158, CONCAT('^(?:-*[^-]){', STR(((451 - ?templateMotifSequenceMatchBeginPositionQ58530159) + 1)), '}'), '')))), '[a-z]', '')) AS ?step1170) . BIND((STRLEN(SUBSTR(?targetMotifMatchCigarQ58530MF_01447160, 1, (STRLEN(?targetMotifMatchCigarQ58530MF_01447160) - STRLEN(REPLACE(?targetMotifMatchCigarQ58530MF_01447160, CONCAT('^(?:[a-z]*(?:[A-Z]|-)){', STR(?step1170), '}'), ''))))) - STRLEN(REPLACE(SUBSTR(?targetMotifMatchCigarQ58530MF_01447160, 1, (STRLEN(?targetMotifMatchCigarQ58530MF_01447160) - STRLEN(REPLACE(?targetMotifMatchCigarQ58530MF_01447160, CONCAT('^(?:[a-z]*(?:[A-Z]|-)){', STR(?step1170), '}'), '')))), '[^-]', ''))) AS ?step2171) . BIND(((?step2171 + ?targetMotifMatchRegionMatchBeginPositionMF_01447161) - 1) AS ?thisPositionOn39) . BIND(?thisPositionOn39 AS ?thisPositionOn40) . BIND(?this AS ?pfs1t172) . BIND(URI(CONCAT(STR(?thisSequence), '#position', STR(?thisPositionOn39))) AS ?pfsb37) . BIND(URI(CONCAT(STR(?thisSequence), '#position', STR(?thisPositionOn40))) AS ?pfse38) . FILTER ((SUBSTR(?thisSequenceValue, ?thisPositionOn39, 1) = 'D')) . BIND(URI(CONCAT(STR(?this), '#MF_01447a36')) AS ?annotation36) . BIND(?this AS ?pfs35) . } OPTIONAL { ?this up:sequence ?thisSequence . ?thisSequence rdf:value ?thisSequenceValue . ?templateMotifMatch177 faldo:location ?templateMotifSequenceMatchRegionQ58530178 ; edam:is_output_of ?templateMotifSequenceProfileAlignmentOperationQ58530180 ; rdf:type edam:data_0869 ; rdf:value ?templateMotifCigarQ58530MF_01447173 . ?templateMotifSequenceMatchRegionQ58530178 faldo:begin ?templateMotifSequenceMatchBeginQ58530179 . ?templateMotifSequenceMatchBeginQ58530179 faldo:position ?templateMotifSequenceMatchBeginPositionQ58530174 ; faldo:reference isoform:Q58530-1 . ?templateMotifSequenceProfileAlignmentOperationQ58530180 edam:has_input signature:MF_01447 ; rdf:type edam:operation_0300 . ?targetMotifMatch181 faldo:location ?targetMotifMatchRegionMatch182 ; edam:is_output_of ?targetMotifSequenceAlignmentOperationMF_01447184 ; rdf:type edam:data_0869 ; rdf:value ?targetMotifMatchCigarQ58530MF_01447175 . ?targetMotifMatchRegionMatch182 faldo:begin ?targetMotifMatchRegionMatchBeginMF_01447183 . ?targetMotifMatchRegionMatchBeginMF_01447183 faldo:position ?targetMotifMatchRegionMatchBeginPositionMF_01447176 ; faldo:reference ?thisSequence . ?targetMotifSequenceAlignmentOperationMF_01447184 edam:has_input signature:MF_01447 ; rdf:type edam:operation_0300 . BIND(STRLEN(REPLACE(SUBSTR(?templateMotifCigarQ58530MF_01447173, 1, (STRLEN(?templateMotifCigarQ58530MF_01447173) - STRLEN(REPLACE(?templateMotifCigarQ58530MF_01447173, CONCAT('^(?:-*[^-]){', STR(((127 - ?templateMotifSequenceMatchBeginPositionQ58530174) + 1)), '}'), '')))), '[a-z]', '')) AS ?step1185) . BIND((STRLEN(SUBSTR(?targetMotifMatchCigarQ58530MF_01447175, 1, (STRLEN(?targetMotifMatchCigarQ58530MF_01447175) - STRLEN(REPLACE(?targetMotifMatchCigarQ58530MF_01447175, CONCAT('^(?:[a-z]*(?:[A-Z]|-)){', STR(?step1185), '}'), ''))))) - STRLEN(REPLACE(SUBSTR(?targetMotifMatchCigarQ58530MF_01447175, 1, (STRLEN(?targetMotifMatchCigarQ58530MF_01447175) - STRLEN(REPLACE(?targetMotifMatchCigarQ58530MF_01447175, CONCAT('^(?:[a-z]*(?:[A-Z]|-)){', STR(?step1185), '}'), '')))), '[^-]', ''))) AS ?step2186) . BIND(((?step2186 + ?targetMotifMatchRegionMatchBeginPositionMF_01447176) - 1) AS ?thisPositionOn46) . BIND(STRLEN(REPLACE(SUBSTR(?templateMotifCigarQ58530MF_01447173, 1, (STRLEN(?templateMotifCigarQ58530MF_01447173) - STRLEN(REPLACE(?templateMotifCigarQ58530MF_01447173, CONCAT('^(?:-*[^-]){', STR(((131 - ?templateMotifSequenceMatchBeginPositionQ58530174) + 1)), '}'), '')))), '[a-z]', '')) AS ?step1187) . BIND((STRLEN(SUBSTR(?targetMotifMatchCigarQ58530MF_01447175, 1, (STRLEN(?targetMotifMatchCigarQ58530MF_01447175) - STRLEN(REPLACE(?targetMotifMatchCigarQ58530MF_01447175, CONCAT('^(?:[a-z]*(?:[A-Z]|-)){', STR(?step1187), '}'), ''))))) - STRLEN(REPLACE(SUBSTR(?targetMotifMatchCigarQ58530MF_01447175, 1, (STRLEN(?targetMotifMatchCigarQ58530MF_01447175) - STRLEN(REPLACE(?targetMotifMatchCigarQ58530MF_01447175, CONCAT('^(?:[a-z]*(?:[A-Z]|-)){', STR(?step1187), '}'), '')))), '[^-]', ''))) AS ?step2188) . BIND(((?step2188 + ?targetMotifMatchRegionMatchBeginPositionMF_01447176) - 1) AS ?thisPositionOn47) . BIND(?this AS ?pfs1t189) . BIND(URI(CONCAT(STR(?thisSequence), '#position', STR(?thisPositionOn46))) AS ?pfsb43) . BIND(URI(CONCAT(STR(?thisSequence), '#position', STR(?thisPositionOn47))) AS ?pfse44) . FILTER (REGEX('[ARNDCQEGHILKMFPSTWYVBZJUOX][ARNDCQEGHILKMFPSTWYVBZJUOX]SG[GA]', SUBSTR(?thisSequenceValue, ?thisPositionOn46, (?thisPositionOn47 - ?thisPositionOn46)))) . BIND(URI(CONCAT(STR(?this), '#MF_01447a42')) AS ?annotation42) . BIND(?this AS ?pfs41) . } OPTIONAL { ?this up:sequence ?thisSequence . ?thisSequence rdf:value ?thisSequenceValue . ?templateMotifMatch194 faldo:location ?templateMotifSequenceMatchRegionQ58530195 ; edam:is_output_of ?templateMotifSequenceProfileAlignmentOperationQ58530197 ; rdf:type edam:data_0869 ; rdf:value ?templateMotifCigarQ58530MF_01447190 . ?templateMotifSequenceMatchRegionQ58530195 faldo:begin ?templateMotifSequenceMatchBeginQ58530196 . ?templateMotifSequenceMatchBeginQ58530196 faldo:position ?templateMotifSequenceMatchBeginPositionQ58530191 ; faldo:reference isoform:Q58530-1 . ?templateMotifSequenceProfileAlignmentOperationQ58530197 edam:has_input signature:MF_01447 ; rdf:type edam:operation_0300 . ?targetMotifMatch198 faldo:location ?targetMotifMatchRegionMatch199 ; edam:is_output_of ?targetMotifSequenceAlignmentOperationMF_01447201 ; rdf:type edam:data_0869 ; rdf:value ?targetMotifMatchCigarQ58530MF_01447192 . ?targetMotifMatchRegionMatch199 faldo:begin ?targetMotifMatchRegionMatchBeginMF_01447200 . ?targetMotifMatchRegionMatchBeginMF_01447200 faldo:position ?targetMotifMatchRegionMatchBeginPositionMF_01447193 ; faldo:reference ?thisSequence . ?targetMotifSequenceAlignmentOperationMF_01447201 edam:has_input signature:MF_01447 ; rdf:type edam:operation_0300 . BIND(STRLEN(REPLACE(SUBSTR(?templateMotifCigarQ58530MF_01447190, 1, (STRLEN(?templateMotifCigarQ58530MF_01447190) - STRLEN(REPLACE(?templateMotifCigarQ58530MF_01447190, CONCAT('^(?:-*[^-]){', STR(((106 - ?templateMotifSequenceMatchBeginPositionQ58530191) + 1)), '}'), '')))), '[a-z]', '')) AS ?step1202) . BIND((STRLEN(SUBSTR(?targetMotifMatchCigarQ58530MF_01447192, 1, (STRLEN(?targetMotifMatchCigarQ58530MF_01447192) - STRLEN(REPLACE(?targetMotifMatchCigarQ58530MF_01447192, CONCAT('^(?:[a-z]*(?:[A-Z]|-)){', STR(?step1202), '}'), ''))))) - STRLEN(REPLACE(SUBSTR(?targetMotifMatchCigarQ58530MF_01447192, 1, (STRLEN(?targetMotifMatchCigarQ58530MF_01447192) - STRLEN(REPLACE(?targetMotifMatchCigarQ58530MF_01447192, CONCAT('^(?:[a-z]*(?:[A-Z]|-)){', STR(?step1202), '}'), '')))), '[^-]', ''))) AS ?step2203) . BIND(((?step2203 + ?targetMotifMatchRegionMatchBeginPositionMF_01447193) - 1) AS ?thisPositionOn53) . BIND(?thisPositionOn53 AS ?thisPositionOn54) . BIND(?this AS ?pfs1t204) . BIND(URI(CONCAT(STR(?thisSequence), '#position', STR(?thisPositionOn53))) AS ?pfsb50) . BIND(URI(CONCAT(STR(?thisSequence), '#position', STR(?thisPositionOn54))) AS ?pfse51) . FILTER ((SUBSTR(?thisSequenceValue, ?thisPositionOn53, 1) = 'H')) . BIND(URI(CONCAT(STR(?this), '#MF_01447a49')) AS ?annotation49) . BIND(?this AS ?pfs48) . } OPTIONAL { ?this up:sequence ?thisSequence . ?thisSequence rdf:value ?thisSequenceValue . ?templateMotifMatch209 faldo:location ?templateMotifSequenceMatchRegionQ58530210 ; edam:is_output_of ?templateMotifSequenceProfileAlignmentOperationQ58530212 ; rdf:type edam:data_0869 ; rdf:value ?templateMotifCigarQ58530MF_01447205 . ?templateMotifSequenceMatchRegionQ58530210 faldo:begin ?templateMotifSequenceMatchBeginQ58530211 . ?templateMotifSequenceMatchBeginQ58530211 faldo:position ?templateMotifSequenceMatchBeginPositionQ58530206 ; faldo:reference isoform:Q58530-1 . ?templateMotifSequenceProfileAlignmentOperationQ58530212 edam:has_input signature:MF_01447 ; rdf:type edam:operation_0300 . ?targetMotifMatch213 faldo:location ?targetMotifMatchRegionMatch214 ; edam:is_output_of ?targetMotifSequenceAlignmentOperationMF_01447216 ; rdf:type edam:data_0869 ; rdf:value ?targetMotifMatchCigarQ58530MF_01447207 . ?targetMotifMatchRegionMatch214 faldo:begin ?targetMotifMatchRegionMatchBeginMF_01447215 . ?targetMotifMatchRegionMatchBeginMF_01447215 faldo:position ?targetMotifMatchRegionMatchBeginPositionMF_01447208 ; faldo:reference ?thisSequence . ?targetMotifSequenceAlignmentOperationMF_01447216 edam:has_input signature:MF_01447 ; rdf:type edam:operation_0300 . BIND(STRLEN(REPLACE(SUBSTR(?templateMotifCigarQ58530MF_01447205, 1, (STRLEN(?templateMotifCigarQ58530MF_01447205) - STRLEN(REPLACE(?templateMotifCigarQ58530MF_01447205, CONCAT('^(?:-*[^-]){', STR(((110 - ?templateMotifSequenceMatchBeginPositionQ58530206) + 1)), '}'), '')))), '[a-z]', '')) AS ?step1217) . BIND((STRLEN(SUBSTR(?targetMotifMatchCigarQ58530MF_01447207, 1, (STRLEN(?targetMotifMatchCigarQ58530MF_01447207) - STRLEN(REPLACE(?targetMotifMatchCigarQ58530MF_01447207, CONCAT('^(?:[a-z]*(?:[A-Z]|-)){', STR(?step1217), '}'), ''))))) - STRLEN(REPLACE(SUBSTR(?targetMotifMatchCigarQ58530MF_01447207, 1, (STRLEN(?targetMotifMatchCigarQ58530MF_01447207) - STRLEN(REPLACE(?targetMotifMatchCigarQ58530MF_01447207, CONCAT('^(?:[a-z]*(?:[A-Z]|-)){', STR(?step1217), '}'), '')))), '[^-]', ''))) AS ?step2218) . BIND(((?step2218 + ?targetMotifMatchRegionMatchBeginPositionMF_01447208) - 1) AS ?thisPositionOn60) . BIND(?thisPositionOn60 AS ?thisPositionOn61) . BIND(?this AS ?pfs1t219) . BIND(URI(CONCAT(STR(?thisSequence), '#position', STR(?thisPositionOn60))) AS ?pfsb57) . BIND(URI(CONCAT(STR(?thisSequence), '#position', STR(?thisPositionOn61))) AS ?pfse58) . FILTER ((SUBSTR(?thisSequenceValue, ?thisPositionOn60, 1) = 'H')) . BIND(URI(CONCAT(STR(?this), '#MF_01447a56')) AS ?annotation56) . BIND(?this AS ?pfs55) . } OPTIONAL { ?this up:sequence ?thisSequence . ?thisSequence rdf:value ?thisSequenceValue . ?templateMotifMatch224 faldo:location ?templateMotifSequenceMatchRegionQ58530225 ; edam:is_output_of ?templateMotifSequenceProfileAlignmentOperationQ58530227 ; rdf:type edam:data_0869 ; rdf:value ?templateMotifCigarQ58530MF_01447220 . ?templateMotifSequenceMatchRegionQ58530225 faldo:begin ?templateMotifSequenceMatchBeginQ58530226 . ?templateMotifSequenceMatchBeginQ58530226 faldo:position ?templateMotifSequenceMatchBeginPositionQ58530221 ; faldo:reference isoform:Q58530-1 . ?templateMotifSequenceProfileAlignmentOperationQ58530227 edam:has_input signature:MF_01447 ; rdf:type edam:operation_0300 . ?targetMotifMatch228 faldo:location ?targetMotifMatchRegionMatch229 ; edam:is_output_of ?targetMotifSequenceAlignmentOperationMF_01447231 ; rdf:type edam:data_0869 ; rdf:value ?targetMotifMatchCigarQ58530MF_01447222 . ?targetMotifMatchRegionMatch229 faldo:begin ?targetMotifMatchRegionMatchBeginMF_01447230 . ?targetMotifMatchRegionMatchBeginMF_01447230 faldo:position ?targetMotifMatchRegionMatchBeginPositionMF_01447223 ; faldo:reference ?thisSequence . ?targetMotifSequenceAlignmentOperationMF_01447231 edam:has_input signature:MF_01447 ; rdf:type edam:operation_0300 . BIND(STRLEN(REPLACE(SUBSTR(?templateMotifCigarQ58530MF_01447220, 1, (STRLEN(?templateMotifCigarQ58530MF_01447220) - STRLEN(REPLACE(?templateMotifCigarQ58530MF_01447220, CONCAT('^(?:-*[^-]){', STR(((127 - ?templateMotifSequenceMatchBeginPositionQ58530221) + 1)), '}'), '')))), '[a-z]', '')) AS ?step1232) . BIND((STRLEN(SUBSTR(?targetMotifMatchCigarQ58530MF_01447222, 1, (STRLEN(?targetMotifMatchCigarQ58530MF_01447222) - STRLEN(REPLACE(?targetMotifMatchCigarQ58530MF_01447222, CONCAT('^(?:[a-z]*(?:[A-Z]|-)){', STR(?step1232), '}'), ''))))) - STRLEN(REPLACE(SUBSTR(?targetMotifMatchCigarQ58530MF_01447222, 1, (STRLEN(?targetMotifMatchCigarQ58530MF_01447222) - STRLEN(REPLACE(?targetMotifMatchCigarQ58530MF_01447222, CONCAT('^(?:[a-z]*(?:[A-Z]|-)){', STR(?step1232), '}'), '')))), '[^-]', ''))) AS ?step2233) . BIND(((?step2233 + ?targetMotifMatchRegionMatchBeginPositionMF_01447223) - 1) AS ?thisPositionOn67) . BIND(?thisPositionOn67 AS ?thisPositionOn68) . BIND(?this AS ?pfs1t234) . BIND(URI(CONCAT(STR(?thisSequence), '#position', STR(?thisPositionOn67))) AS ?pfsb64) . BIND(URI(CONCAT(STR(?thisSequence), '#position', STR(?thisPositionOn68))) AS ?pfse65) . FILTER ((SUBSTR(?thisSequenceValue, ?thisPositionOn67, 1) = 'Y')) . BIND(URI(CONCAT(STR(?this), '#MF_01447a63')) AS ?annotation63) . BIND(?this AS ?pfs62) . } OPTIONAL { ?this up:sequence ?thisSequence . ?thisSequence rdf:value ?thisSequenceValue . ?templateMotifMatch239 faldo:location ?templateMotifSequenceMatchRegionQ58530240 ; edam:is_output_of ?templateMotifSequenceProfileAlignmentOperationQ58530242 ; rdf:type edam:data_0869 ; rdf:value ?templateMotifCigarQ58530MF_01447235 . ?templateMotifSequenceMatchRegionQ58530240 faldo:begin ?templateMotifSequenceMatchBeginQ58530241 . ?templateMotifSequenceMatchBeginQ58530241 faldo:position ?templateMotifSequenceMatchBeginPositionQ58530236 ; faldo:reference isoform:Q58530-1 . ?templateMotifSequenceProfileAlignmentOperationQ58530242 edam:has_input signature:MF_01447 ; rdf:type edam:operation_0300 . ?targetMotifMatch243 faldo:location ?targetMotifMatchRegionMatch244 ; edam:is_output_of ?targetMotifSequenceAlignmentOperationMF_01447246 ; rdf:type edam:data_0869 ; rdf:value ?targetMotifMatchCigarQ58530MF_01447237 . ?targetMotifMatchRegionMatch244 faldo:begin ?targetMotifMatchRegionMatchBeginMF_01447245 . ?targetMotifMatchRegionMatchBeginMF_01447245 faldo:position ?targetMotifMatchRegionMatchBeginPositionMF_01447238 ; faldo:reference ?thisSequence . ?targetMotifSequenceAlignmentOperationMF_01447246 edam:has_input signature:MF_01447 ; rdf:type edam:operation_0300 . BIND(STRLEN(REPLACE(SUBSTR(?templateMotifCigarQ58530MF_01447235, 1, (STRLEN(?templateMotifCigarQ58530MF_01447235) - STRLEN(REPLACE(?templateMotifCigarQ58530MF_01447235, CONCAT('^(?:-*[^-]){', STR(((284 - ?templateMotifSequenceMatchBeginPositionQ58530236) + 1)), '}'), '')))), '[a-z]', '')) AS ?step1247) . BIND((STRLEN(SUBSTR(?targetMotifMatchCigarQ58530MF_01447237, 1, (STRLEN(?targetMotifMatchCigarQ58530MF_01447237) - STRLEN(REPLACE(?targetMotifMatchCigarQ58530MF_01447237, CONCAT('^(?:[a-z]*(?:[A-Z]|-)){', STR(?step1247), '}'), ''))))) - STRLEN(REPLACE(SUBSTR(?targetMotifMatchCigarQ58530MF_01447237, 1, (STRLEN(?targetMotifMatchCigarQ58530MF_01447237) - STRLEN(REPLACE(?targetMotifMatchCigarQ58530MF_01447237, CONCAT('^(?:[a-z]*(?:[A-Z]|-)){', STR(?step1247), '}'), '')))), '[^-]', ''))) AS ?step2248) . BIND(((?step2248 + ?targetMotifMatchRegionMatchBeginPositionMF_01447238) - 1) AS ?thisPositionOn74) . BIND(?thisPositionOn74 AS ?thisPositionOn75) . BIND(?this AS ?pfs1t249) . BIND(URI(CONCAT(STR(?thisSequence), '#position', STR(?thisPositionOn74))) AS ?pfsb71) . BIND(URI(CONCAT(STR(?thisSequence), '#position', STR(?thisPositionOn75))) AS ?pfse72) . FILTER ((SUBSTR(?thisSequenceValue, ?thisPositionOn74, 1) = 'D')) . BIND(URI(CONCAT(STR(?this), '#MF_01447a70')) AS ?annotation70) . BIND(?this AS ?pfs69) . } OPTIONAL { ?this up:sequence ?thisSequence . ?thisSequence rdf:value ?thisSequenceValue . ?templateMotifMatch254 faldo:location ?templateMotifSequenceMatchRegionQ58530255 ; edam:is_output_of ?templateMotifSequenceProfileAlignmentOperationQ58530257 ; rdf:type edam:data_0869 ; rdf:value ?templateMotifCigarQ58530MF_01447250 . ?templateMotifSequenceMatchRegionQ58530255 faldo:begin ?templateMotifSequenceMatchBeginQ58530256 . ?templateMotifSequenceMatchBeginQ58530256 faldo:position ?templateMotifSequenceMatchBeginPositionQ58530251 ; faldo:reference isoform:Q58530-1 . ?templateMotifSequenceProfileAlignmentOperationQ58530257 edam:has_input signature:MF_01447 ; rdf:type edam:operation_0300 . ?targetMotifMatch258 faldo:location ?targetMotifMatchRegionMatch259 ; edam:is_output_of ?targetMotifSequenceAlignmentOperationMF_01447261 ; rdf:type edam:data_0869 ; rdf:value ?targetMotifMatchCigarQ58530MF_01447252 . ?targetMotifMatchRegionMatch259 faldo:begin ?targetMotifMatchRegionMatchBeginMF_01447260 . ?targetMotifMatchRegionMatchBeginMF_01447260 faldo:position ?targetMotifMatchRegionMatchBeginPositionMF_01447253 ; faldo:reference ?thisSequence . ?targetMotifSequenceAlignmentOperationMF_01447261 edam:has_input signature:MF_01447 ; rdf:type edam:operation_0300 . BIND(STRLEN(REPLACE(SUBSTR(?templateMotifCigarQ58530MF_01447250, 1, (STRLEN(?templateMotifCigarQ58530MF_01447250) - STRLEN(REPLACE(?templateMotifCigarQ58530MF_01447250, CONCAT('^(?:-*[^-]){', STR(((159 - ?templateMotifSequenceMatchBeginPositionQ58530251) + 1)), '}'), '')))), '[a-z]', '')) AS ?step1262) . BIND((STRLEN(SUBSTR(?targetMotifMatchCigarQ58530MF_01447252, 1, (STRLEN(?targetMotifMatchCigarQ58530MF_01447252) - STRLEN(REPLACE(?targetMotifMatchCigarQ58530MF_01447252, CONCAT('^(?:[a-z]*(?:[A-Z]|-)){', STR(?step1262), '}'), ''))))) - STRLEN(REPLACE(SUBSTR(?targetMotifMatchCigarQ58530MF_01447252, 1, (STRLEN(?targetMotifMatchCigarQ58530MF_01447252) - STRLEN(REPLACE(?targetMotifMatchCigarQ58530MF_01447252, CONCAT('^(?:[a-z]*(?:[A-Z]|-)){', STR(?step1262), '}'), '')))), '[^-]', ''))) AS ?step2263) . BIND(((?step2263 + ?targetMotifMatchRegionMatchBeginPositionMF_01447253) - 1) AS ?thisPositionOn81) . BIND(?thisPositionOn81 AS ?thisPositionOn82) . BIND(?this AS ?pfs1t264) . BIND(URI(CONCAT(STR(?thisSequence), '#position', STR(?thisPositionOn81))) AS ?pfsb78) . BIND(URI(CONCAT(STR(?thisSequence), '#position', STR(?thisPositionOn82))) AS ?pfse79) . FILTER ((SUBSTR(?thisSequenceValue, ?thisPositionOn81, 1) = 'D')) . BIND(URI(CONCAT(STR(?this), '#MF_01447a77')) AS ?annotation77) . BIND(?this AS ?pfs76) . } OPTIONAL { ?this up:sequence ?thisSequence . ?thisSequence rdf:value ?thisSequenceValue . ?templateMotifMatch269 faldo:location ?templateMotifSequenceMatchRegionQ58530270 ; edam:is_output_of ?templateMotifSequenceProfileAlignmentOperationQ58530272 ; rdf:type edam:data_0869 ; rdf:value ?templateMotifCigarQ58530MF_01447265 . ?templateMotifSequenceMatchRegionQ58530270 faldo:begin ?templateMotifSequenceMatchBeginQ58530271 . ?templateMotifSequenceMatchBeginQ58530271 faldo:position ?templateMotifSequenceMatchBeginPositionQ58530266 ; faldo:reference isoform:Q58530-1 . ?templateMotifSequenceProfileAlignmentOperationQ58530272 edam:has_input signature:MF_01447 ; rdf:type edam:operation_0300 . ?targetMotifMatch273 faldo:location ?targetMotifMatchRegionMatch274 ; edam:is_output_of ?targetMotifSequenceAlignmentOperationMF_01447276 ; rdf:type edam:data_0869 ; rdf:value ?targetMotifMatchCigarQ58530MF_01447267 . ?targetMotifMatchRegionMatch274 faldo:begin ?targetMotifMatchRegionMatchBeginMF_01447275 . ?targetMotifMatchRegionMatchBeginMF_01447275 faldo:position ?targetMotifMatchRegionMatchBeginPositionMF_01447268 ; faldo:reference ?thisSequence . ?targetMotifSequenceAlignmentOperationMF_01447276 edam:has_input signature:MF_01447 ; rdf:type edam:operation_0300 . BIND(STRLEN(REPLACE(SUBSTR(?templateMotifCigarQ58530MF_01447265, 1, (STRLEN(?templateMotifCigarQ58530MF_01447265) - STRLEN(REPLACE(?templateMotifCigarQ58530MF_01447265, CONCAT('^(?:-*[^-]){', STR(((172 - ?templateMotifSequenceMatchBeginPositionQ58530266) + 1)), '}'), '')))), '[a-z]', '')) AS ?step1277) . BIND((STRLEN(SUBSTR(?targetMotifMatchCigarQ58530MF_01447267, 1, (STRLEN(?targetMotifMatchCigarQ58530MF_01447267) - STRLEN(REPLACE(?targetMotifMatchCigarQ58530MF_01447267, CONCAT('^(?:[a-z]*(?:[A-Z]|-)){', STR(?step1277), '}'), ''))))) - STRLEN(REPLACE(SUBSTR(?targetMotifMatchCigarQ58530MF_01447267, 1, (STRLEN(?targetMotifMatchCigarQ58530MF_01447267) - STRLEN(REPLACE(?targetMotifMatchCigarQ58530MF_01447267, CONCAT('^(?:[a-z]*(?:[A-Z]|-)){', STR(?step1277), '}'), '')))), '[^-]', ''))) AS ?step2278) . BIND(((?step2278 + ?targetMotifMatchRegionMatchBeginPositionMF_01447268) - 1) AS ?thisPositionOn88) . BIND(?thisPositionOn88 AS ?thisPositionOn89) . BIND(?this AS ?pfs1t279) . BIND(URI(CONCAT(STR(?thisSequence), '#position', STR(?thisPositionOn88))) AS ?pfsb85) . BIND(URI(CONCAT(STR(?thisSequence), '#position', STR(?thisPositionOn89))) AS ?pfse86) . FILTER ((SUBSTR(?thisSequenceValue, ?thisPositionOn88, 1) = 'G')) . BIND(URI(CONCAT(STR(?this), '#MF_01447a84')) AS ?annotation84) . BIND(?this AS ?pfs83) . } OPTIONAL { ?this up:sequence ?thisSequence . ?thisSequence rdf:value ?thisSequenceValue . ?templateMotifMatch284 faldo:location ?templateMotifSequenceMatchRegionQ58530285 ; edam:is_output_of ?templateMotifSequenceProfileAlignmentOperationQ58530287 ; rdf:type edam:data_0869 ; rdf:value ?templateMotifCigarQ58530MF_01447280 . ?templateMotifSequenceMatchRegionQ58530285 faldo:begin ?templateMotifSequenceMatchBeginQ58530286 . ?templateMotifSequenceMatchBeginQ58530286 faldo:position ?templateMotifSequenceMatchBeginPositionQ58530281 ; faldo:reference isoform:Q58530-1 . ?templateMotifSequenceProfileAlignmentOperationQ58530287 edam:has_input signature:MF_01447 ; rdf:type edam:operation_0300 . ?targetMotifMatch288 faldo:location ?targetMotifMatchRegionMatch289 ; edam:is_output_of ?targetMotifSequenceAlignmentOperationMF_01447291 ; rdf:type edam:data_0869 ; rdf:value ?targetMotifMatchCigarQ58530MF_01447282 . ?targetMotifMatchRegionMatch289 faldo:begin ?targetMotifMatchRegionMatchBeginMF_01447290 . ?targetMotifMatchRegionMatchBeginMF_01447290 faldo:position ?targetMotifMatchRegionMatchBeginPositionMF_01447283 ; faldo:reference ?thisSequence . ?targetMotifSequenceAlignmentOperationMF_01447291 edam:has_input signature:MF_01447 ; rdf:type edam:operation_0300 . BIND(STRLEN(REPLACE(SUBSTR(?templateMotifCigarQ58530MF_01447280, 1, (STRLEN(?templateMotifCigarQ58530MF_01447280) - STRLEN(REPLACE(?templateMotifCigarQ58530MF_01447280, CONCAT('^(?:-*[^-]){', STR(((176 - ?templateMotifSequenceMatchBeginPositionQ58530281) + 1)), '}'), '')))), '[a-z]', '')) AS ?step1292) . BIND((STRLEN(SUBSTR(?targetMotifMatchCigarQ58530MF_01447282, 1, (STRLEN(?targetMotifMatchCigarQ58530MF_01447282) - STRLEN(REPLACE(?targetMotifMatchCigarQ58530MF_01447282, CONCAT('^(?:[a-z]*(?:[A-Z]|-)){', STR(?step1292), '}'), ''))))) - STRLEN(REPLACE(SUBSTR(?targetMotifMatchCigarQ58530MF_01447282, 1, (STRLEN(?targetMotifMatchCigarQ58530MF_01447282) - STRLEN(REPLACE(?targetMotifMatchCigarQ58530MF_01447282, CONCAT('^(?:[a-z]*(?:[A-Z]|-)){', STR(?step1292), '}'), '')))), '[^-]', ''))) AS ?step2293) . BIND(((?step2293 + ?targetMotifMatchRegionMatchBeginPositionMF_01447283) - 1) AS ?thisPositionOn95) . BIND(?thisPositionOn95 AS ?thisPositionOn96) . BIND(?this AS ?pfs1t294) . BIND(URI(CONCAT(STR(?thisSequence), '#position', STR(?thisPositionOn95))) AS ?pfsb92) . BIND(URI(CONCAT(STR(?thisSequence), '#position', STR(?thisPositionOn96))) AS ?pfse93) . FILTER ((SUBSTR(?thisSequenceValue, ?thisPositionOn95, 1) = 'E')) . BIND(URI(CONCAT(STR(?this), '#MF_01447a91')) AS ?annotation91) . BIND(?this AS ?pfs90) . } OPTIONAL { ?this up:sequence ?thisSequence . ?thisSequence rdf:value ?thisSequenceValue . ?templateMotifMatch299 faldo:location ?templateMotifSequenceMatchRegionQ58530300 ; edam:is_output_of ?templateMotifSequenceProfileAlignmentOperationQ58530302 ; rdf:type edam:data_0869 ; rdf:value ?templateMotifCigarQ58530MF_01447295 . ?templateMotifSequenceMatchRegionQ58530300 faldo:begin ?templateMotifSequenceMatchBeginQ58530301 . ?templateMotifSequenceMatchBeginQ58530301 faldo:position ?templateMotifSequenceMatchBeginPositionQ58530296 ; faldo:reference isoform:Q58530-1 . ?templateMotifSequenceProfileAlignmentOperationQ58530302 edam:has_input signature:MF_01447 ; rdf:type edam:operation_0300 . ?targetMotifMatch303 faldo:location ?targetMotifMatchRegionMatch304 ; edam:is_output_of ?targetMotifSequenceAlignmentOperationMF_01447306 ; rdf:type edam:data_0869 ; rdf:value ?targetMotifMatchCigarQ58530MF_01447297 . ?targetMotifMatchRegionMatch304 faldo:begin ?targetMotifMatchRegionMatchBeginMF_01447305 . ?targetMotifMatchRegionMatchBeginMF_01447305 faldo:position ?targetMotifMatchRegionMatchBeginPositionMF_01447298 ; faldo:reference ?thisSequence . ?targetMotifSequenceAlignmentOperationMF_01447306 edam:has_input signature:MF_01447 ; rdf:type edam:operation_0300 . BIND(STRLEN(REPLACE(SUBSTR(?templateMotifCigarQ58530MF_01447295, 1, (STRLEN(?templateMotifCigarQ58530MF_01447295) - STRLEN(REPLACE(?templateMotifCigarQ58530MF_01447295, CONCAT('^(?:-*[^-]){', STR(((256 - ?templateMotifSequenceMatchBeginPositionQ58530296) + 1)), '}'), '')))), '[a-z]', '')) AS ?step1307) . BIND((STRLEN(SUBSTR(?targetMotifMatchCigarQ58530MF_01447297, 1, (STRLEN(?targetMotifMatchCigarQ58530MF_01447297) - STRLEN(REPLACE(?targetMotifMatchCigarQ58530MF_01447297, CONCAT('^(?:[a-z]*(?:[A-Z]|-)){', STR(?step1307), '}'), ''))))) - STRLEN(REPLACE(SUBSTR(?targetMotifMatchCigarQ58530MF_01447297, 1, (STRLEN(?targetMotifMatchCigarQ58530MF_01447297) - STRLEN(REPLACE(?targetMotifMatchCigarQ58530MF_01447297, CONCAT('^(?:[a-z]*(?:[A-Z]|-)){', STR(?step1307), '}'), '')))), '[^-]', ''))) AS ?step2308) . BIND(((?step2308 + ?targetMotifMatchRegionMatchBeginPositionMF_01447298) - 1) AS ?thisPositionOn102) . BIND(?thisPositionOn102 AS ?thisPositionOn103) . BIND(?this AS ?pfs1t309) . BIND(URI(CONCAT(STR(?thisSequence), '#position', STR(?thisPositionOn102))) AS ?pfsb99) . BIND(URI(CONCAT(STR(?thisSequence), '#position', STR(?thisPositionOn103))) AS ?pfse100) . FILTER ((SUBSTR(?thisSequenceValue, ?thisPositionOn102, 1) = 'N')) . BIND(URI(CONCAT(STR(?this), '#MF_01447a98')) AS ?annotation98) . BIND(?this AS ?pfs97) . } OPTIONAL { ?this up:sequence ?thisSequence . ?thisSequence rdf:value ?thisSequenceValue . ?templateMotifMatch314 faldo:location ?templateMotifSequenceMatchRegionQ58530315 ; edam:is_output_of ?templateMotifSequenceProfileAlignmentOperationQ58530317 ; rdf:type edam:data_0869 ; rdf:value ?templateMotifCigarQ58530MF_01447310 . ?templateMotifSequenceMatchRegionQ58530315 faldo:begin ?templateMotifSequenceMatchBeginQ58530316 . ?templateMotifSequenceMatchBeginQ58530316 faldo:position ?templateMotifSequenceMatchBeginPositionQ58530311 ; faldo:reference isoform:Q58530-1 . ?templateMotifSequenceProfileAlignmentOperationQ58530317 edam:has_input signature:MF_01447 ; rdf:type edam:operation_0300 . ?targetMotifMatch318 faldo:location ?targetMotifMatchRegionMatch319 ; edam:is_output_of ?targetMotifSequenceAlignmentOperationMF_01447321 ; rdf:type edam:data_0869 ; rdf:value ?targetMotifMatchCigarQ58530MF_01447312 . ?targetMotifMatchRegionMatch319 faldo:begin ?targetMotifMatchRegionMatchBeginMF_01447320 . ?targetMotifMatchRegionMatchBeginMF_01447320 faldo:position ?targetMotifMatchRegionMatchBeginPositionMF_01447313 ; faldo:reference ?thisSequence . ?targetMotifSequenceAlignmentOperationMF_01447321 edam:has_input signature:MF_01447 ; rdf:type edam:operation_0300 . BIND(STRLEN(REPLACE(SUBSTR(?templateMotifCigarQ58530MF_01447310, 1, (STRLEN(?templateMotifCigarQ58530MF_01447310) - STRLEN(REPLACE(?templateMotifCigarQ58530MF_01447310, CONCAT('^(?:-*[^-]){', STR(((360 - ?templateMotifSequenceMatchBeginPositionQ58530311) + 1)), '}'), '')))), '[a-z]', '')) AS ?step1322) . BIND((STRLEN(SUBSTR(?targetMotifMatchCigarQ58530MF_01447312, 1, (STRLEN(?targetMotifMatchCigarQ58530MF_01447312) - STRLEN(REPLACE(?targetMotifMatchCigarQ58530MF_01447312, CONCAT('^(?:[a-z]*(?:[A-Z]|-)){', STR(?step1322), '}'), ''))))) - STRLEN(REPLACE(SUBSTR(?targetMotifMatchCigarQ58530MF_01447312, 1, (STRLEN(?targetMotifMatchCigarQ58530MF_01447312) - STRLEN(REPLACE(?targetMotifMatchCigarQ58530MF_01447312, CONCAT('^(?:[a-z]*(?:[A-Z]|-)){', STR(?step1322), '}'), '')))), '[^-]', ''))) AS ?step2323) . BIND(((?step2323 + ?targetMotifMatchRegionMatchBeginPositionMF_01447313) - 1) AS ?thisPositionOn109) . BIND(?thisPositionOn109 AS ?thisPositionOn110) . BIND(?this AS ?pfs1t324) . BIND(URI(CONCAT(STR(?thisSequence), '#position', STR(?thisPositionOn109))) AS ?pfsb106) . BIND(URI(CONCAT(STR(?thisSequence), '#position', STR(?thisPositionOn110))) AS ?pfse107) . FILTER ((SUBSTR(?thisSequenceValue, ?thisPositionOn109, 1) = 'K')) . BIND(URI(CONCAT(STR(?this), '#MF_01447a105')) AS ?annotation105) . BIND(?this AS ?pfs104) . } }