@prefix rdf: . @prefix rdfs: . @prefix rdf4j: . @prefix sesame: . @prefix owl: . @prefix xsd: . @prefix fn: . a , ; , , , , , , , , , , , , , , , , , , , , , , , , , , , , , , , , , , , , , , , , , , , , , , , , , , , , , , , , , , , , , , , , , , , , , , , , , , , , , , , , , , , , , , , , , , , , , , , , , , , , , , , , , , , , , , , , , , , , , , , , , , , , , , , , , , , , , , , , , , , , , , , , , , , , , , , , , , , , , , , , , , , , , , , , , , , , , , , , , , , , , , , , , , , , , , , , , , , , , , , , , , , , , , , , ; ; ; ; """CONSTRUCT { _:563092 up:source unirule:MF_01554 . _:563093 up:source unirule:MF_01554 . _:563094 up:source unirule:MF_01554 . _:563095 up:source unirule:MF_01554 . _:563096 up:source unirule:MF_01554 . _:563097 up:source unirule:MF_01554 . _:563098 up:source unirule:MF_01554 . _:563099 up:source unirule:MF_01554 . _:563100 up:source unirule:MF_01554 . _:563101 up:source unirule:MF_01554 . _:563102 up:source unirule:MF_01554 . _:563103 up:source unirule:MF_01554 . _:563104 up:source unirule:MF_01554 . _:563105 up:source unirule:MF_01554 . _:563106 up:source unirule:MF_01554 . _:563107 up:source unirule:MF_01554 . _:563108 up:source unirule:MF_01554 . _:563109 up:source unirule:MF_01554 . _:563110 up:source unirule:MF_01554 . _:563111 up:source unirule:MF_01554 . _:563112 up:source unirule:MF_01554 . _:563113 up:source unirule:MF_01554 . _:563114 up:source unirule:MF_01554 . _:563115 up:source unirule:MF_01554 . _:563116 up:source unirule:MF_01554 . ?this up:annotation ?annotation1 , ?annotation2 , ?annotation4 , ?annotation5 ; up:classifiedWith GO:0008966 , keyword:413 , keyword:597 . ?gene0 skos:prefLabel 'glmM' . ?annotation1 a up:Function_Annotation ; rdfs:comment 'Catalyzes the conversion of glucosamine-6-phosphate to glucosamine-1-phosphate.' . ?annotation2 up:activity ?activity3 ; rdf:type up:Catalytic_Activity_Annotation . ?activity3 up:catalyticActivity ; up:enzymeClass . ?annotation4 a up:PTM_Annotation ; rdfs:comment 'Activated by phosphorylation.' . ?annotation5 a up:Similarity_Annotation ; rdfs:comment 'Belongs to the phosphohexose mutase family.' . ?case6 up:classifiedWith GO:0000287 , keyword:460 , keyword:479 . ?case7 up:recommendedName ?name8 . ?name8 up:ecName '5.4.2.10' ; up:fullName 'Phosphoglucosamine mutase' ; rdf:type up:Structured_Name . ?case9 up:recommendedName ?name10 . ?name10 up:ecName '5.4.2.10' ; up:fullName 'Probable phosphoglucosamine mutase' ; rdf:type up:Structured_Name . ?pfs11 up:annotation ?annotation12 , ?annotation18 , ?annotation24 , ?annotation30 . ?annotation12 faldo:begin ?pfsb13 ; faldo:end ?pfse14 ; up:ligand ?ligand15 ; rdf:type up:Binding_Site_Annotation ; rdfs:comment 'via phosphate group' . ?pfsb13 faldo:position ?thisPositionOn16 ; rdf:type faldo:ExactPosition . ?pfse14 faldo:position ?thisPositionOn17 ; rdf:type faldo:ExactPosition . ?ligand15 rdfs:subClassOf chebi:18420 . ?annotation18 faldo:begin ?pfsb19 ; faldo:end ?pfse20 ; up:ligand ?ligand21 ; rdf:type up:Binding_Site_Annotation . ?pfsb19 faldo:position ?thisPositionOn22 ; rdf:type faldo:ExactPosition . ?pfse20 faldo:position ?thisPositionOn23 ; rdf:type faldo:ExactPosition . ?ligand21 rdfs:subClassOf chebi:18420 . ?annotation24 faldo:begin ?pfsb25 ; faldo:end ?pfse26 ; up:ligand ?ligand27 ; rdf:type up:Binding_Site_Annotation . ?pfsb25 faldo:position ?thisPositionOn28 ; rdf:type faldo:ExactPosition . ?pfse26 faldo:position ?thisPositionOn29 ; rdf:type faldo:ExactPosition . ?ligand27 rdfs:subClassOf chebi:18420 . ?annotation30 faldo:begin ?pfsb31 ; faldo:end ?pfse32 ; up:ligand ?ligand33 ; rdf:type up:Binding_Site_Annotation . ?pfsb31 faldo:position ?thisPositionOn34 ; rdf:type faldo:ExactPosition . ?pfse32 faldo:position ?thisPositionOn35 ; rdf:type faldo:ExactPosition . ?ligand33 rdfs:subClassOf chebi:18420 . ?pfs36 up:annotation ?annotation37 , ?annotation43 , ?annotation49 , ?annotation55 . ?annotation37 faldo:begin ?pfsb38 ; faldo:end ?pfse39 ; up:ligand ?ligand40 ; rdf:type up:Binding_Site_Annotation ; rdfs:comment 'via phosphate group' . ?pfsb38 faldo:position ?thisPositionOn41 ; rdf:type faldo:ExactPosition . ?pfse39 faldo:position ?thisPositionOn42 ; rdf:type faldo:ExactPosition . ?ligand40 rdfs:subClassOf chebi:18420 . ?annotation43 faldo:begin ?pfsb44 ; faldo:end ?pfse45 ; up:ligand ?ligand46 ; rdf:type up:Binding_Site_Annotation . ?pfsb44 faldo:position ?thisPositionOn47 ; rdf:type faldo:ExactPosition . ?pfse45 faldo:position ?thisPositionOn48 ; rdf:type faldo:ExactPosition . ?ligand46 rdfs:subClassOf chebi:18420 . ?annotation49 faldo:begin ?pfsb50 ; faldo:end ?pfse51 ; up:ligand ?ligand52 ; rdf:type up:Binding_Site_Annotation . ?pfsb50 faldo:position ?thisPositionOn53 ; rdf:type faldo:ExactPosition . ?pfse51 faldo:position ?thisPositionOn54 ; rdf:type faldo:ExactPosition . ?ligand52 rdfs:subClassOf chebi:18420 . ?annotation55 faldo:begin ?pfsb56 ; faldo:end ?pfse57 ; up:ligand ?ligand58 ; rdf:type up:Binding_Site_Annotation . ?pfsb56 faldo:position ?thisPositionOn59 ; rdf:type faldo:ExactPosition . ?pfse57 faldo:position ?thisPositionOn60 ; rdf:type faldo:ExactPosition . ?ligand58 rdfs:subClassOf chebi:18420 . ?pfs61 up:annotation ?annotation62 . ?annotation62 faldo:begin ?pfsb63 ; faldo:end ?pfse64 ; rdf:type up:Active_Site_Annotation ; rdfs:comment 'Phosphoserine intermediate' . ?pfsb63 faldo:position ?thisPositionOn65 ; rdf:type faldo:ExactPosition . ?pfse64 faldo:position ?thisPositionOn66 ; rdf:type faldo:ExactPosition . ?pfs67 up:annotation ?annotation68 . ?annotation68 faldo:begin ?pfsb69 ; faldo:end ?pfse70 ; rdf:type up:Modified_Residue_Annotation ; rdfs:comment 'Phosphoserine' . ?pfsb69 faldo:position ?thisPositionOn71 ; rdf:type faldo:ExactPosition . ?pfse70 faldo:position ?thisPositionOn72 ; rdf:type faldo:ExactPosition . ?pfs73 up:annotation ?annotation74 . ?annotation74 faldo:begin ?pfsb75 ; faldo:end ?pfse76 ; rdf:type up:Active_Site_Annotation ; rdfs:comment 'Phosphoserine intermediate' . ?pfsb75 faldo:position ?thisPositionOn77 ; rdf:type faldo:ExactPosition . ?pfse76 faldo:position ?thisPositionOn78 ; rdf:type faldo:ExactPosition . ?pfs79 up:annotation ?annotation80 . ?annotation80 faldo:begin ?pfsb81 ; faldo:end ?pfse82 ; rdf:type up:Modified_Residue_Annotation ; rdfs:comment 'Phosphoserine' . ?pfsb81 faldo:position ?thisPositionOn83 ; rdf:type faldo:ExactPosition . ?pfse82 faldo:position ?thisPositionOn84 ; rdf:type faldo:ExactPosition . _:563117 a rdf:Statement ; up:attribution _:563092 ; rdf:subject ?gene0 ; rdf:predicate up:encodedBy ; rdf:object ?gene0 . _:563118 a rdf:Statement ; up:attribution _:563093 ; rdf:subject ?this ; rdf:predicate up:annotation ; rdf:object ?annotation1 . _:563119 a rdf:Statement ; up:attribution _:563094 ; rdf:subject ?this ; rdf:predicate up:annotation ; rdf:object ?annotation2 . _:563120 a rdf:Statement ; up:attribution _:563095 ; rdf:subject ?this ; rdf:predicate up:annotation ; rdf:object ?annotation4 . _:563121 a rdf:Statement ; up:attribution _:563096 ; rdf:subject ?this ; rdf:predicate up:annotation ; rdf:object ?annotation5 . _:563122 a rdf:Statement ; up:attribution _:563097 ; rdf:subject ?this ; rdf:predicate up:classifiedWith ; rdf:object keyword:413 . _:563123 a rdf:Statement ; up:attribution _:563098 ; rdf:subject ?this ; rdf:predicate up:classifiedWith ; rdf:object keyword:597 . _:563124 a rdf:Statement ; up:attribution _:563099 ; rdf:subject ?this ; rdf:predicate up:classifiedWith ; rdf:object GO:0008966 . _:563125 a rdf:Statement ; up:attribution _:563100 ; rdf:subject ?case6 ; rdf:predicate up:classifiedWith ; rdf:object keyword:460 . _:563126 a rdf:Statement ; up:attribution _:563101 ; rdf:subject ?case6 ; rdf:predicate up:classifiedWith ; rdf:object keyword:479 . _:563127 a rdf:Statement ; up:attribution _:563102 ; rdf:subject ?case6 ; rdf:predicate up:classifiedWith ; rdf:object GO:0000287 . _:563128 a rdf:Statement ; up:attribution _:563103 ; rdf:subject ?case7 ; rdf:predicate up:recommendedName ; rdf:object ?name8 . _:563129 a rdf:Statement ; up:attribution _:563104 ; rdf:subject ?case9 ; rdf:predicate up:recommendedName ; rdf:object ?name10 . _:563130 a rdf:Statement ; up:source unirule:MF_01554 ; rdf:subject ?pfs11 ; rdf:predicate up:annotation ; rdf:object ?annotation12 . _:563131 a rdf:Statement ; up:attribution _:563105 ; rdf:subject ?pfs11 ; rdf:predicate up:annotation ; rdf:object ?annotation12 . _:563132 a rdf:Statement ; up:source unirule:MF_01554 ; rdf:subject ?pfs11 ; rdf:predicate up:annotation ; rdf:object ?annotation18 . _:563133 a rdf:Statement ; up:attribution _:563106 ; rdf:subject ?pfs11 ; rdf:predicate up:annotation ; rdf:object ?annotation18 . _:563134 a rdf:Statement ; up:source unirule:MF_01554 ; rdf:subject ?pfs11 ; rdf:predicate up:annotation ; rdf:object ?annotation24 . _:563135 a rdf:Statement ; up:attribution _:563107 ; rdf:subject ?pfs11 ; rdf:predicate up:annotation ; rdf:object ?annotation24 . _:563136 a rdf:Statement ; up:source unirule:MF_01554 ; rdf:subject ?pfs11 ; rdf:predicate up:annotation ; rdf:object ?annotation30 . _:563137 a rdf:Statement ; up:attribution _:563108 ; rdf:subject ?pfs11 ; rdf:predicate up:annotation ; rdf:object ?annotation30 . _:563138 a rdf:Statement ; up:source unirule:MF_01554 ; rdf:subject ?pfs36 ; rdf:predicate up:annotation ; rdf:object ?annotation37 . _:563139 a rdf:Statement ; up:attribution _:563109 ; rdf:subject ?pfs36 ; rdf:predicate up:annotation ; rdf:object ?annotation37 . _:563140 a rdf:Statement ; up:source unirule:MF_01554 ; rdf:subject ?pfs36 ; rdf:predicate up:annotation ; rdf:object ?annotation43 . _:563141 a rdf:Statement ; up:attribution _:563110 ; rdf:subject ?pfs36 ; rdf:predicate up:annotation ; rdf:object ?annotation43 . _:563142 a rdf:Statement ; up:source unirule:MF_01554 ; rdf:subject ?pfs36 ; rdf:predicate up:annotation ; rdf:object ?annotation49 . _:563143 a rdf:Statement ; up:attribution _:563111 ; rdf:subject ?pfs36 ; rdf:predicate up:annotation ; rdf:object ?annotation49 . _:563144 a rdf:Statement ; up:source unirule:MF_01554 ; rdf:subject ?pfs36 ; rdf:predicate up:annotation ; rdf:object ?annotation55 . _:563145 a rdf:Statement ; up:attribution _:563112 ; rdf:subject ?pfs36 ; rdf:predicate up:annotation ; rdf:object ?annotation55 . _:563146 a rdf:Statement ; up:source unirule:MF_01554 ; rdf:subject ?pfs61 ; rdf:predicate up:annotation ; rdf:object ?annotation62 . _:563147 a rdf:Statement ; up:attribution _:563113 ; rdf:subject ?pfs61 ; rdf:predicate up:annotation ; rdf:object ?annotation62 . _:563148 a rdf:Statement ; up:source unirule:MF_01554 ; rdf:subject ?pfs67 ; rdf:predicate up:annotation ; rdf:object ?annotation68 . _:563149 a rdf:Statement ; up:attribution _:563114 ; rdf:subject ?pfs67 ; rdf:predicate up:annotation ; rdf:object ?annotation68 . _:563150 a rdf:Statement ; up:source unirule:MF_01554 ; rdf:subject ?pfs73 ; rdf:predicate up:annotation ; rdf:object ?annotation74 . _:563151 a rdf:Statement ; up:attribution _:563115 ; rdf:subject ?pfs73 ; rdf:predicate up:annotation ; rdf:object ?annotation74 . _:563152 a rdf:Statement ; up:source unirule:MF_01554 ; rdf:subject ?pfs79 ; rdf:predicate up:annotation ; rdf:object ?annotation80 . _:563153 a rdf:Statement ; up:attribution _:563116 ; rdf:subject ?pfs79 ; rdf:predicate up:annotation ; rdf:object ?annotation80 . } WHERE { #baseURI: http://purl.uniprot.org/unirule/MF_01554 #Rule MF_01554 Created by:? on:2005-12-06 Modified by:Edouard de Castro on:2023-06-01 { ?this up:organism ?thisOrganism ; rdfs:seeAlso signature:MF_01554_B . ?thisOrganism rdfs:subClassOf+ taxon:2 . } UNION { ?this up:organism ?thisOrganism ; rdfs:seeAlso signature:MF_01554_A . ?thisOrganism rdfs:subClassOf+ taxon:2157 . } BIND(URI(CONCAT(STR(?this), '#MF_01554a1')) AS ?annotation1) . BIND(URI(CONCAT(STR(?this), '#MF_01554a2')) AS ?annotation2) . BIND(URI(CONCAT(STR(?this), '#MF_01554a4')) AS ?annotation4) . BIND(URI(CONCAT(STR(?this), '#MF_01554a5')) AS ?annotation5) . OPTIONAL { ?this up:sequence ?thisSequence . ?thisSequence rdf:value ?thisSequenceValue . ?templateMotifMatch89 faldo:location ?templateMotifSequenceMatchRegionQ6LYB490 ; edam:is_output_of ?templateMotifSequenceProfileAlignmentOperationQ6LYB492 ; rdf:type edam:data_0869 ; rdf:value ?templateMotifCigarQ6LYB4MF_01554_A85 . ?templateMotifSequenceMatchRegionQ6LYB490 faldo:begin ?templateMotifSequenceMatchBeginQ6LYB491 . ?templateMotifSequenceMatchBeginQ6LYB491 faldo:position ?templateMotifSequenceMatchBeginPositionQ6LYB486 ; faldo:reference isoform:Q6LYB4-1 . ?templateMotifSequenceProfileAlignmentOperationQ6LYB492 edam:has_input signature:MF_01554_A ; rdf:type edam:operation_0300 . ?targetMotifMatch93 faldo:location ?targetMotifMatchRegionMatch94 ; edam:is_output_of ?targetMotifSequenceAlignmentOperationMF_01554_A96 ; rdf:type edam:data_0869 ; rdf:value ?targetMotifMatchCigarQ6LYB4MF_01554_A87 . ?targetMotifMatchRegionMatch94 faldo:begin ?targetMotifMatchRegionMatchBeginMF_01554_A95 . ?targetMotifMatchRegionMatchBeginMF_01554_A95 faldo:position ?targetMotifMatchRegionMatchBeginPositionMF_01554_A88 ; faldo:reference ?thisSequence . ?targetMotifSequenceAlignmentOperationMF_01554_A96 edam:has_input signature:MF_01554_A ; rdf:type edam:operation_0300 . BIND(?this AS ?tagFTGRP_1) . ?this up:organism ?thisOrganism . ?thisOrganism rdfs:subClassOf+ taxon:2157 . BIND(STRLEN(REPLACE(SUBSTR(?templateMotifCigarQ6LYB4MF_01554_A85, 1, (STRLEN(?templateMotifCigarQ6LYB4MF_01554_A85) - STRLEN(REPLACE(?templateMotifCigarQ6LYB4MF_01554_A85, CONCAT('^(?:-*[^-]){', STR(((88 - ?templateMotifSequenceMatchBeginPositionQ6LYB486) + 1)), '}'), '')))), '[a-z]', '')) AS ?step197) . BIND((STRLEN(SUBSTR(?targetMotifMatchCigarQ6LYB4MF_01554_A87, 1, (STRLEN(?targetMotifMatchCigarQ6LYB4MF_01554_A87) - STRLEN(REPLACE(?targetMotifMatchCigarQ6LYB4MF_01554_A87, CONCAT('^(?:[a-z]*(?:[A-Z]|-)){', STR(?step197), '}'), ''))))) - STRLEN(REPLACE(SUBSTR(?targetMotifMatchCigarQ6LYB4MF_01554_A87, 1, (STRLEN(?targetMotifMatchCigarQ6LYB4MF_01554_A87) - STRLEN(REPLACE(?targetMotifMatchCigarQ6LYB4MF_01554_A87, CONCAT('^(?:[a-z]*(?:[A-Z]|-)){', STR(?step197), '}'), '')))), '[^-]', ''))) AS ?step298) . BIND(((?step298 + ?targetMotifMatchRegionMatchBeginPositionMF_01554_A88) - 1) AS ?thisPositionOn16) . BIND(?thisPositionOn16 AS ?thisPositionOn17) . BIND(?this AS ?pfs1t99) . BIND(URI(CONCAT(STR(?thisSequence), '#position', STR(?thisPositionOn16))) AS ?pfsb13) . BIND(URI(CONCAT(STR(?thisSequence), '#position', STR(?thisPositionOn17))) AS ?pfse14) . FILTER ((SUBSTR(?thisSequenceValue, ?thisPositionOn16, 1) = 'S')) . BIND(STRLEN(REPLACE(SUBSTR(?templateMotifCigarQ6LYB4MF_01554_A85, 1, (STRLEN(?templateMotifCigarQ6LYB4MF_01554_A85) - STRLEN(REPLACE(?templateMotifCigarQ6LYB4MF_01554_A85, CONCAT('^(?:-*[^-]){', STR(((231 - ?templateMotifSequenceMatchBeginPositionQ6LYB486) + 1)), '}'), '')))), '[a-z]', '')) AS ?step1100) . BIND((STRLEN(SUBSTR(?targetMotifMatchCigarQ6LYB4MF_01554_A87, 1, (STRLEN(?targetMotifMatchCigarQ6LYB4MF_01554_A87) - STRLEN(REPLACE(?targetMotifMatchCigarQ6LYB4MF_01554_A87, CONCAT('^(?:[a-z]*(?:[A-Z]|-)){', STR(?step1100), '}'), ''))))) - STRLEN(REPLACE(SUBSTR(?targetMotifMatchCigarQ6LYB4MF_01554_A87, 1, (STRLEN(?targetMotifMatchCigarQ6LYB4MF_01554_A87) - STRLEN(REPLACE(?targetMotifMatchCigarQ6LYB4MF_01554_A87, CONCAT('^(?:[a-z]*(?:[A-Z]|-)){', STR(?step1100), '}'), '')))), '[^-]', ''))) AS ?step2101) . BIND(((?step2101 + ?targetMotifMatchRegionMatchBeginPositionMF_01554_A88) - 1) AS ?thisPositionOn22) . BIND(?thisPositionOn22 AS ?thisPositionOn23) . BIND(?this AS ?pfs1t102) . BIND(URI(CONCAT(STR(?thisSequence), '#position', STR(?thisPositionOn22))) AS ?pfsb19) . BIND(URI(CONCAT(STR(?thisSequence), '#position', STR(?thisPositionOn23))) AS ?pfse20) . FILTER ((SUBSTR(?thisSequenceValue, ?thisPositionOn22, 1) = 'D')) . BIND(STRLEN(REPLACE(SUBSTR(?templateMotifCigarQ6LYB4MF_01554_A85, 1, (STRLEN(?templateMotifCigarQ6LYB4MF_01554_A85) - STRLEN(REPLACE(?templateMotifCigarQ6LYB4MF_01554_A85, CONCAT('^(?:-*[^-]){', STR(((233 - ?templateMotifSequenceMatchBeginPositionQ6LYB486) + 1)), '}'), '')))), '[a-z]', '')) AS ?step1103) . BIND((STRLEN(SUBSTR(?targetMotifMatchCigarQ6LYB4MF_01554_A87, 1, (STRLEN(?targetMotifMatchCigarQ6LYB4MF_01554_A87) - STRLEN(REPLACE(?targetMotifMatchCigarQ6LYB4MF_01554_A87, CONCAT('^(?:[a-z]*(?:[A-Z]|-)){', STR(?step1103), '}'), ''))))) - STRLEN(REPLACE(SUBSTR(?targetMotifMatchCigarQ6LYB4MF_01554_A87, 1, (STRLEN(?targetMotifMatchCigarQ6LYB4MF_01554_A87) - STRLEN(REPLACE(?targetMotifMatchCigarQ6LYB4MF_01554_A87, CONCAT('^(?:[a-z]*(?:[A-Z]|-)){', STR(?step1103), '}'), '')))), '[^-]', ''))) AS ?step2104) . BIND(((?step2104 + ?targetMotifMatchRegionMatchBeginPositionMF_01554_A88) - 1) AS ?thisPositionOn28) . BIND(?thisPositionOn28 AS ?thisPositionOn29) . BIND(?this AS ?pfs1t105) . BIND(URI(CONCAT(STR(?thisSequence), '#position', STR(?thisPositionOn28))) AS ?pfsb25) . BIND(URI(CONCAT(STR(?thisSequence), '#position', STR(?thisPositionOn29))) AS ?pfse26) . FILTER ((SUBSTR(?thisSequenceValue, ?thisPositionOn28, 1) = 'D')) . BIND(STRLEN(REPLACE(SUBSTR(?templateMotifCigarQ6LYB4MF_01554_A85, 1, (STRLEN(?templateMotifCigarQ6LYB4MF_01554_A85) - STRLEN(REPLACE(?templateMotifCigarQ6LYB4MF_01554_A85, CONCAT('^(?:-*[^-]){', STR(((235 - ?templateMotifSequenceMatchBeginPositionQ6LYB486) + 1)), '}'), '')))), '[a-z]', '')) AS ?step1106) . BIND((STRLEN(SUBSTR(?targetMotifMatchCigarQ6LYB4MF_01554_A87, 1, (STRLEN(?targetMotifMatchCigarQ6LYB4MF_01554_A87) - STRLEN(REPLACE(?targetMotifMatchCigarQ6LYB4MF_01554_A87, CONCAT('^(?:[a-z]*(?:[A-Z]|-)){', STR(?step1106), '}'), ''))))) - STRLEN(REPLACE(SUBSTR(?targetMotifMatchCigarQ6LYB4MF_01554_A87, 1, (STRLEN(?targetMotifMatchCigarQ6LYB4MF_01554_A87) - STRLEN(REPLACE(?targetMotifMatchCigarQ6LYB4MF_01554_A87, CONCAT('^(?:[a-z]*(?:[A-Z]|-)){', STR(?step1106), '}'), '')))), '[^-]', ''))) AS ?step2107) . BIND(((?step2107 + ?targetMotifMatchRegionMatchBeginPositionMF_01554_A88) - 1) AS ?thisPositionOn34) . BIND(?thisPositionOn34 AS ?thisPositionOn35) . BIND(?this AS ?pfs1t108) . BIND(URI(CONCAT(STR(?thisSequence), '#position', STR(?thisPositionOn34))) AS ?pfsb31) . BIND(URI(CONCAT(STR(?thisSequence), '#position', STR(?thisPositionOn35))) AS ?pfse32) . FILTER ((SUBSTR(?thisSequenceValue, ?thisPositionOn34, 1) = 'D')) . BIND(?this AS ?pfs11) . } OPTIONAL { ?this up:sequence ?thisSequence . ?thisSequence rdf:value ?thisSequenceValue . ?templateMotifMatch113 faldo:location ?templateMotifSequenceMatchRegionP31120114 ; edam:is_output_of ?templateMotifSequenceProfileAlignmentOperationP31120116 ; rdf:type edam:data_0869 ; rdf:value ?templateMotifCigarP31120MF_01554_B109 . ?templateMotifSequenceMatchRegionP31120114 faldo:begin ?templateMotifSequenceMatchBeginP31120115 . ?templateMotifSequenceMatchBeginP31120115 faldo:position ?templateMotifSequenceMatchBeginPositionP31120110 ; faldo:reference isoform:P31120-1 . ?templateMotifSequenceProfileAlignmentOperationP31120116 edam:has_input signature:MF_01554_B ; rdf:type edam:operation_0300 . ?targetMotifMatch117 faldo:location ?targetMotifMatchRegionMatch118 ; edam:is_output_of ?targetMotifSequenceAlignmentOperationMF_01554_B120 ; rdf:type edam:data_0869 ; rdf:value ?targetMotifMatchCigarP31120MF_01554_B111 . ?targetMotifMatchRegionMatch118 faldo:begin ?targetMotifMatchRegionMatchBeginMF_01554_B119 . ?targetMotifMatchRegionMatchBeginMF_01554_B119 faldo:position ?targetMotifMatchRegionMatchBeginPositionMF_01554_B112 ; faldo:reference ?thisSequence . ?targetMotifSequenceAlignmentOperationMF_01554_B120 edam:has_input signature:MF_01554_B ; rdf:type edam:operation_0300 . BIND(?this AS ?tagFTGRP_1) . ?this up:organism ?thisOrganism . ?thisOrganism rdfs:subClassOf+ taxon:2 . BIND(STRLEN(REPLACE(SUBSTR(?templateMotifCigarP31120MF_01554_B109, 1, (STRLEN(?templateMotifCigarP31120MF_01554_B109) - STRLEN(REPLACE(?templateMotifCigarP31120MF_01554_B109, CONCAT('^(?:-*[^-]){', STR(((102 - ?templateMotifSequenceMatchBeginPositionP31120110) + 1)), '}'), '')))), '[a-z]', '')) AS ?step1121) . BIND((STRLEN(SUBSTR(?targetMotifMatchCigarP31120MF_01554_B111, 1, (STRLEN(?targetMotifMatchCigarP31120MF_01554_B111) - STRLEN(REPLACE(?targetMotifMatchCigarP31120MF_01554_B111, CONCAT('^(?:[a-z]*(?:[A-Z]|-)){', STR(?step1121), '}'), ''))))) - STRLEN(REPLACE(SUBSTR(?targetMotifMatchCigarP31120MF_01554_B111, 1, (STRLEN(?targetMotifMatchCigarP31120MF_01554_B111) - STRLEN(REPLACE(?targetMotifMatchCigarP31120MF_01554_B111, CONCAT('^(?:[a-z]*(?:[A-Z]|-)){', STR(?step1121), '}'), '')))), '[^-]', ''))) AS ?step2122) . BIND(((?step2122 + ?targetMotifMatchRegionMatchBeginPositionMF_01554_B112) - 1) AS ?thisPositionOn41) . BIND(?thisPositionOn41 AS ?thisPositionOn42) . BIND(?this AS ?pfs2t123) . BIND(URI(CONCAT(STR(?thisSequence), '#position', STR(?thisPositionOn41))) AS ?pfsb38) . BIND(URI(CONCAT(STR(?thisSequence), '#position', STR(?thisPositionOn42))) AS ?pfse39) . FILTER ((SUBSTR(?thisSequenceValue, ?thisPositionOn41, 1) = 'S')) . BIND(STRLEN(REPLACE(SUBSTR(?templateMotifCigarP31120MF_01554_B109, 1, (STRLEN(?templateMotifCigarP31120MF_01554_B109) - STRLEN(REPLACE(?templateMotifCigarP31120MF_01554_B109, CONCAT('^(?:-*[^-]){', STR(((241 - ?templateMotifSequenceMatchBeginPositionP31120110) + 1)), '}'), '')))), '[a-z]', '')) AS ?step1124) . BIND((STRLEN(SUBSTR(?targetMotifMatchCigarP31120MF_01554_B111, 1, (STRLEN(?targetMotifMatchCigarP31120MF_01554_B111) - STRLEN(REPLACE(?targetMotifMatchCigarP31120MF_01554_B111, CONCAT('^(?:[a-z]*(?:[A-Z]|-)){', STR(?step1124), '}'), ''))))) - STRLEN(REPLACE(SUBSTR(?targetMotifMatchCigarP31120MF_01554_B111, 1, (STRLEN(?targetMotifMatchCigarP31120MF_01554_B111) - STRLEN(REPLACE(?targetMotifMatchCigarP31120MF_01554_B111, CONCAT('^(?:[a-z]*(?:[A-Z]|-)){', STR(?step1124), '}'), '')))), '[^-]', ''))) AS ?step2125) . BIND(((?step2125 + ?targetMotifMatchRegionMatchBeginPositionMF_01554_B112) - 1) AS ?thisPositionOn47) . BIND(?thisPositionOn47 AS ?thisPositionOn48) . BIND(?this AS ?pfs2t126) . BIND(URI(CONCAT(STR(?thisSequence), '#position', STR(?thisPositionOn47))) AS ?pfsb44) . BIND(URI(CONCAT(STR(?thisSequence), '#position', STR(?thisPositionOn48))) AS ?pfse45) . FILTER ((SUBSTR(?thisSequenceValue, ?thisPositionOn47, 1) = 'D')) . BIND(STRLEN(REPLACE(SUBSTR(?templateMotifCigarP31120MF_01554_B109, 1, (STRLEN(?templateMotifCigarP31120MF_01554_B109) - STRLEN(REPLACE(?templateMotifCigarP31120MF_01554_B109, CONCAT('^(?:-*[^-]){', STR(((243 - ?templateMotifSequenceMatchBeginPositionP31120110) + 1)), '}'), '')))), '[a-z]', '')) AS ?step1127) . BIND((STRLEN(SUBSTR(?targetMotifMatchCigarP31120MF_01554_B111, 1, (STRLEN(?targetMotifMatchCigarP31120MF_01554_B111) - STRLEN(REPLACE(?targetMotifMatchCigarP31120MF_01554_B111, CONCAT('^(?:[a-z]*(?:[A-Z]|-)){', STR(?step1127), '}'), ''))))) - STRLEN(REPLACE(SUBSTR(?targetMotifMatchCigarP31120MF_01554_B111, 1, (STRLEN(?targetMotifMatchCigarP31120MF_01554_B111) - STRLEN(REPLACE(?targetMotifMatchCigarP31120MF_01554_B111, CONCAT('^(?:[a-z]*(?:[A-Z]|-)){', STR(?step1127), '}'), '')))), '[^-]', ''))) AS ?step2128) . BIND(((?step2128 + ?targetMotifMatchRegionMatchBeginPositionMF_01554_B112) - 1) AS ?thisPositionOn53) . BIND(?thisPositionOn53 AS ?thisPositionOn54) . BIND(?this AS ?pfs2t129) . BIND(URI(CONCAT(STR(?thisSequence), '#position', STR(?thisPositionOn53))) AS ?pfsb50) . BIND(URI(CONCAT(STR(?thisSequence), '#position', STR(?thisPositionOn54))) AS ?pfse51) . FILTER ((SUBSTR(?thisSequenceValue, ?thisPositionOn53, 1) = 'D')) . BIND(STRLEN(REPLACE(SUBSTR(?templateMotifCigarP31120MF_01554_B109, 1, (STRLEN(?templateMotifCigarP31120MF_01554_B109) - STRLEN(REPLACE(?templateMotifCigarP31120MF_01554_B109, CONCAT('^(?:-*[^-]){', STR(((245 - ?templateMotifSequenceMatchBeginPositionP31120110) + 1)), '}'), '')))), '[a-z]', '')) AS ?step1130) . BIND((STRLEN(SUBSTR(?targetMotifMatchCigarP31120MF_01554_B111, 1, (STRLEN(?targetMotifMatchCigarP31120MF_01554_B111) - STRLEN(REPLACE(?targetMotifMatchCigarP31120MF_01554_B111, CONCAT('^(?:[a-z]*(?:[A-Z]|-)){', STR(?step1130), '}'), ''))))) - STRLEN(REPLACE(SUBSTR(?targetMotifMatchCigarP31120MF_01554_B111, 1, (STRLEN(?targetMotifMatchCigarP31120MF_01554_B111) - STRLEN(REPLACE(?targetMotifMatchCigarP31120MF_01554_B111, CONCAT('^(?:[a-z]*(?:[A-Z]|-)){', STR(?step1130), '}'), '')))), '[^-]', ''))) AS ?step2131) . BIND(((?step2131 + ?targetMotifMatchRegionMatchBeginPositionMF_01554_B112) - 1) AS ?thisPositionOn59) . BIND(?thisPositionOn59 AS ?thisPositionOn60) . BIND(?this AS ?pfs2t132) . BIND(URI(CONCAT(STR(?thisSequence), '#position', STR(?thisPositionOn59))) AS ?pfsb56) . BIND(URI(CONCAT(STR(?thisSequence), '#position', STR(?thisPositionOn60))) AS ?pfse57) . FILTER ((SUBSTR(?thisSequenceValue, ?thisPositionOn59, 1) = 'D')) . BIND(?this AS ?pfs36) . } OPTIONAL { ?this up:sequence ?thisSequence . ?thisSequence rdf:value ?thisSequenceValue . ?templateMotifMatch137 faldo:location ?templateMotifSequenceMatchRegionQ6LYB4138 ; edam:is_output_of ?templateMotifSequenceProfileAlignmentOperationQ6LYB4140 ; rdf:type edam:data_0869 ; rdf:value ?templateMotifCigarQ6LYB4MF_01554_A133 . ?templateMotifSequenceMatchRegionQ6LYB4138 faldo:begin ?templateMotifSequenceMatchBeginQ6LYB4139 . ?templateMotifSequenceMatchBeginQ6LYB4139 faldo:position ?templateMotifSequenceMatchBeginPositionQ6LYB4134 ; faldo:reference isoform:Q6LYB4-1 . ?templateMotifSequenceProfileAlignmentOperationQ6LYB4140 edam:has_input signature:MF_01554_A ; rdf:type edam:operation_0300 . ?targetMotifMatch141 faldo:location ?targetMotifMatchRegionMatch142 ; edam:is_output_of ?targetMotifSequenceAlignmentOperationMF_01554_A144 ; rdf:type edam:data_0869 ; rdf:value ?targetMotifMatchCigarQ6LYB4MF_01554_A135 . ?targetMotifMatchRegionMatch142 faldo:begin ?targetMotifMatchRegionMatchBeginMF_01554_A143 . ?targetMotifMatchRegionMatchBeginMF_01554_A143 faldo:position ?targetMotifMatchRegionMatchBeginPositionMF_01554_A136 ; faldo:reference ?thisSequence . ?targetMotifSequenceAlignmentOperationMF_01554_A144 edam:has_input signature:MF_01554_A ; rdf:type edam:operation_0300 . ?this up:organism ?thisOrganism . ?thisOrganism rdfs:subClassOf+ taxon:2157 . BIND(STRLEN(REPLACE(SUBSTR(?templateMotifCigarQ6LYB4MF_01554_A133, 1, (STRLEN(?templateMotifCigarQ6LYB4MF_01554_A133) - STRLEN(REPLACE(?templateMotifCigarQ6LYB4MF_01554_A133, CONCAT('^(?:-*[^-]){', STR(((88 - ?templateMotifSequenceMatchBeginPositionQ6LYB4134) + 1)), '}'), '')))), '[a-z]', '')) AS ?step1145) . BIND((STRLEN(SUBSTR(?targetMotifMatchCigarQ6LYB4MF_01554_A135, 1, (STRLEN(?targetMotifMatchCigarQ6LYB4MF_01554_A135) - STRLEN(REPLACE(?targetMotifMatchCigarQ6LYB4MF_01554_A135, CONCAT('^(?:[a-z]*(?:[A-Z]|-)){', STR(?step1145), '}'), ''))))) - STRLEN(REPLACE(SUBSTR(?targetMotifMatchCigarQ6LYB4MF_01554_A135, 1, (STRLEN(?targetMotifMatchCigarQ6LYB4MF_01554_A135) - STRLEN(REPLACE(?targetMotifMatchCigarQ6LYB4MF_01554_A135, CONCAT('^(?:[a-z]*(?:[A-Z]|-)){', STR(?step1145), '}'), '')))), '[^-]', ''))) AS ?step2146) . BIND(((?step2146 + ?targetMotifMatchRegionMatchBeginPositionMF_01554_A136) - 1) AS ?thisPositionOn65) . BIND(?thisPositionOn65 AS ?thisPositionOn66) . BIND(?this AS ?pfs3t147) . BIND(URI(CONCAT(STR(?thisSequence), '#position', STR(?thisPositionOn65))) AS ?pfsb63) . BIND(URI(CONCAT(STR(?thisSequence), '#position', STR(?thisPositionOn66))) AS ?pfse64) . FILTER ((SUBSTR(?thisSequenceValue, ?thisPositionOn65, 1) = 'S')) . BIND(URI(CONCAT(STR(?this), '#MF_01554a62')) AS ?annotation62) . BIND(?this AS ?pfs61) . } OPTIONAL { ?this up:sequence ?thisSequence . ?thisSequence rdf:value ?thisSequenceValue . ?templateMotifMatch152 faldo:location ?templateMotifSequenceMatchRegionQ6LYB4153 ; edam:is_output_of ?templateMotifSequenceProfileAlignmentOperationQ6LYB4155 ; rdf:type edam:data_0869 ; rdf:value ?templateMotifCigarQ6LYB4MF_01554_A148 . ?templateMotifSequenceMatchRegionQ6LYB4153 faldo:begin ?templateMotifSequenceMatchBeginQ6LYB4154 . ?templateMotifSequenceMatchBeginQ6LYB4154 faldo:position ?templateMotifSequenceMatchBeginPositionQ6LYB4149 ; faldo:reference isoform:Q6LYB4-1 . ?templateMotifSequenceProfileAlignmentOperationQ6LYB4155 edam:has_input signature:MF_01554_A ; rdf:type edam:operation_0300 . ?targetMotifMatch156 faldo:location ?targetMotifMatchRegionMatch157 ; edam:is_output_of ?targetMotifSequenceAlignmentOperationMF_01554_A159 ; rdf:type edam:data_0869 ; rdf:value ?targetMotifMatchCigarQ6LYB4MF_01554_A150 . ?targetMotifMatchRegionMatch157 faldo:begin ?targetMotifMatchRegionMatchBeginMF_01554_A158 . ?targetMotifMatchRegionMatchBeginMF_01554_A158 faldo:position ?targetMotifMatchRegionMatchBeginPositionMF_01554_A151 ; faldo:reference ?thisSequence . ?targetMotifSequenceAlignmentOperationMF_01554_A159 edam:has_input signature:MF_01554_A ; rdf:type edam:operation_0300 . ?this up:organism ?thisOrganism . ?thisOrganism rdfs:subClassOf+ taxon:2157 . BIND(STRLEN(REPLACE(SUBSTR(?templateMotifCigarQ6LYB4MF_01554_A148, 1, (STRLEN(?templateMotifCigarQ6LYB4MF_01554_A148) - STRLEN(REPLACE(?templateMotifCigarQ6LYB4MF_01554_A148, CONCAT('^(?:-*[^-]){', STR(((88 - ?templateMotifSequenceMatchBeginPositionQ6LYB4149) + 1)), '}'), '')))), '[a-z]', '')) AS ?step1160) . BIND((STRLEN(SUBSTR(?targetMotifMatchCigarQ6LYB4MF_01554_A150, 1, (STRLEN(?targetMotifMatchCigarQ6LYB4MF_01554_A150) - STRLEN(REPLACE(?targetMotifMatchCigarQ6LYB4MF_01554_A150, CONCAT('^(?:[a-z]*(?:[A-Z]|-)){', STR(?step1160), '}'), ''))))) - STRLEN(REPLACE(SUBSTR(?targetMotifMatchCigarQ6LYB4MF_01554_A150, 1, (STRLEN(?targetMotifMatchCigarQ6LYB4MF_01554_A150) - STRLEN(REPLACE(?targetMotifMatchCigarQ6LYB4MF_01554_A150, CONCAT('^(?:[a-z]*(?:[A-Z]|-)){', STR(?step1160), '}'), '')))), '[^-]', ''))) AS ?step2161) . BIND(((?step2161 + ?targetMotifMatchRegionMatchBeginPositionMF_01554_A151) - 1) AS ?thisPositionOn71) . BIND(?thisPositionOn71 AS ?thisPositionOn72) . BIND(?this AS ?pfs3t162) . BIND(URI(CONCAT(STR(?thisSequence), '#position', STR(?thisPositionOn71))) AS ?pfsb69) . BIND(URI(CONCAT(STR(?thisSequence), '#position', STR(?thisPositionOn72))) AS ?pfse70) . FILTER ((SUBSTR(?thisSequenceValue, ?thisPositionOn71, 1) = 'S')) . BIND(URI(CONCAT(STR(?this), '#MF_01554a68')) AS ?annotation68) . BIND(?this AS ?pfs67) . } OPTIONAL { ?this up:sequence ?thisSequence . ?thisSequence rdf:value ?thisSequenceValue . ?templateMotifMatch167 faldo:location ?templateMotifSequenceMatchRegionP31120168 ; edam:is_output_of ?templateMotifSequenceProfileAlignmentOperationP31120170 ; rdf:type edam:data_0869 ; rdf:value ?templateMotifCigarP31120MF_01554_B163 . ?templateMotifSequenceMatchRegionP31120168 faldo:begin ?templateMotifSequenceMatchBeginP31120169 . ?templateMotifSequenceMatchBeginP31120169 faldo:position ?templateMotifSequenceMatchBeginPositionP31120164 ; faldo:reference isoform:P31120-1 . ?templateMotifSequenceProfileAlignmentOperationP31120170 edam:has_input signature:MF_01554_B ; rdf:type edam:operation_0300 . ?targetMotifMatch171 faldo:location ?targetMotifMatchRegionMatch172 ; edam:is_output_of ?targetMotifSequenceAlignmentOperationMF_01554_B174 ; rdf:type edam:data_0869 ; rdf:value ?targetMotifMatchCigarP31120MF_01554_B165 . ?targetMotifMatchRegionMatch172 faldo:begin ?targetMotifMatchRegionMatchBeginMF_01554_B173 . ?targetMotifMatchRegionMatchBeginMF_01554_B173 faldo:position ?targetMotifMatchRegionMatchBeginPositionMF_01554_B166 ; faldo:reference ?thisSequence . ?targetMotifSequenceAlignmentOperationMF_01554_B174 edam:has_input signature:MF_01554_B ; rdf:type edam:operation_0300 . ?this up:organism ?thisOrganism . ?thisOrganism rdfs:subClassOf+ taxon:2 . BIND(STRLEN(REPLACE(SUBSTR(?templateMotifCigarP31120MF_01554_B163, 1, (STRLEN(?templateMotifCigarP31120MF_01554_B163) - STRLEN(REPLACE(?templateMotifCigarP31120MF_01554_B163, CONCAT('^(?:-*[^-]){', STR(((102 - ?templateMotifSequenceMatchBeginPositionP31120164) + 1)), '}'), '')))), '[a-z]', '')) AS ?step1175) . BIND((STRLEN(SUBSTR(?targetMotifMatchCigarP31120MF_01554_B165, 1, (STRLEN(?targetMotifMatchCigarP31120MF_01554_B165) - STRLEN(REPLACE(?targetMotifMatchCigarP31120MF_01554_B165, CONCAT('^(?:[a-z]*(?:[A-Z]|-)){', STR(?step1175), '}'), ''))))) - STRLEN(REPLACE(SUBSTR(?targetMotifMatchCigarP31120MF_01554_B165, 1, (STRLEN(?targetMotifMatchCigarP31120MF_01554_B165) - STRLEN(REPLACE(?targetMotifMatchCigarP31120MF_01554_B165, CONCAT('^(?:[a-z]*(?:[A-Z]|-)){', STR(?step1175), '}'), '')))), '[^-]', ''))) AS ?step2176) . BIND(((?step2176 + ?targetMotifMatchRegionMatchBeginPositionMF_01554_B166) - 1) AS ?thisPositionOn77) . BIND(?thisPositionOn77 AS ?thisPositionOn78) . BIND(?this AS ?pfs4t177) . BIND(URI(CONCAT(STR(?thisSequence), '#position', STR(?thisPositionOn77))) AS ?pfsb75) . BIND(URI(CONCAT(STR(?thisSequence), '#position', STR(?thisPositionOn78))) AS ?pfse76) . FILTER ((SUBSTR(?thisSequenceValue, ?thisPositionOn77, 1) = 'S')) . BIND(URI(CONCAT(STR(?this), '#MF_01554a74')) AS ?annotation74) . BIND(?this AS ?pfs73) . } OPTIONAL { ?this up:sequence ?thisSequence . ?thisSequence rdf:value ?thisSequenceValue . ?templateMotifMatch182 faldo:location ?templateMotifSequenceMatchRegionP31120183 ; edam:is_output_of ?templateMotifSequenceProfileAlignmentOperationP31120185 ; rdf:type edam:data_0869 ; rdf:value ?templateMotifCigarP31120MF_01554_B178 . ?templateMotifSequenceMatchRegionP31120183 faldo:begin ?templateMotifSequenceMatchBeginP31120184 . ?templateMotifSequenceMatchBeginP31120184 faldo:position ?templateMotifSequenceMatchBeginPositionP31120179 ; faldo:reference isoform:P31120-1 . ?templateMotifSequenceProfileAlignmentOperationP31120185 edam:has_input signature:MF_01554_B ; rdf:type edam:operation_0300 . ?targetMotifMatch186 faldo:location ?targetMotifMatchRegionMatch187 ; edam:is_output_of ?targetMotifSequenceAlignmentOperationMF_01554_B189 ; rdf:type edam:data_0869 ; rdf:value ?targetMotifMatchCigarP31120MF_01554_B180 . ?targetMotifMatchRegionMatch187 faldo:begin ?targetMotifMatchRegionMatchBeginMF_01554_B188 . ?targetMotifMatchRegionMatchBeginMF_01554_B188 faldo:position ?targetMotifMatchRegionMatchBeginPositionMF_01554_B181 ; faldo:reference ?thisSequence . ?targetMotifSequenceAlignmentOperationMF_01554_B189 edam:has_input signature:MF_01554_B ; rdf:type edam:operation_0300 . ?this up:organism ?thisOrganism . ?thisOrganism rdfs:subClassOf+ taxon:2 . BIND(STRLEN(REPLACE(SUBSTR(?templateMotifCigarP31120MF_01554_B178, 1, (STRLEN(?templateMotifCigarP31120MF_01554_B178) - STRLEN(REPLACE(?templateMotifCigarP31120MF_01554_B178, CONCAT('^(?:-*[^-]){', STR(((102 - ?templateMotifSequenceMatchBeginPositionP31120179) + 1)), '}'), '')))), '[a-z]', '')) AS ?step1190) . BIND((STRLEN(SUBSTR(?targetMotifMatchCigarP31120MF_01554_B180, 1, (STRLEN(?targetMotifMatchCigarP31120MF_01554_B180) - STRLEN(REPLACE(?targetMotifMatchCigarP31120MF_01554_B180, CONCAT('^(?:[a-z]*(?:[A-Z]|-)){', STR(?step1190), '}'), ''))))) - STRLEN(REPLACE(SUBSTR(?targetMotifMatchCigarP31120MF_01554_B180, 1, (STRLEN(?targetMotifMatchCigarP31120MF_01554_B180) - STRLEN(REPLACE(?targetMotifMatchCigarP31120MF_01554_B180, CONCAT('^(?:[a-z]*(?:[A-Z]|-)){', STR(?step1190), '}'), '')))), '[^-]', ''))) AS ?step2191) . BIND(((?step2191 + ?targetMotifMatchRegionMatchBeginPositionMF_01554_B181) - 1) AS ?thisPositionOn83) . BIND(?thisPositionOn83 AS ?thisPositionOn84) . BIND(?this AS ?pfs4t192) . BIND(URI(CONCAT(STR(?thisSequence), '#position', STR(?thisPositionOn83))) AS ?pfsb81) . BIND(URI(CONCAT(STR(?thisSequence), '#position', STR(?thisPositionOn84))) AS ?pfse82) . FILTER ((SUBSTR(?thisSequenceValue, ?thisPositionOn83, 1) = 'S')) . BIND(URI(CONCAT(STR(?this), '#MF_01554a80')) AS ?annotation80) . BIND(?this AS ?pfs79) . } OPTIONAL { ?this a up:Protein . BIND(?this AS ?caseWithTag193) . } BIND(IF(BOUND(?tagFTGRP_1), ?caseWithTag193, ?UNBOUND_VARIABLE) AS ?case6) . OPTIONAL { ?this a up:Protein . VALUES ?supertaxon194 {taxon:2 taxon:183939} ?this up:organism ?thisOrganism . ?thisOrganism rdfs:subClassOf+ ?supertaxon194 . BIND(?this AS ?case7) . BIND(URI(CONCAT(STR(?this), '#MF_01554a8')) AS ?name8) . } OPTIONAL { ?this a up:Protein . ?this up:organism ?thisOrganism . FILTER (! (EXISTS { VALUES ?supertaxon195 {taxon:2 taxon:183939} ?thisOrganism rdfs:subClassOf+ ?supertaxon195 . })) . BIND(?this AS ?case9) . BIND(URI(CONCAT(STR(?this), '#MF_01554a10')) AS ?name10) . } } """ . .