@prefix rdf: <http://www.w3.org/1999/02/22-rdf-syntax-ns#> .
@prefix rdfs: <http://www.w3.org/2000/01/rdf-schema#> .
@prefix rdf4j: <http://rdf4j.org/schema/rdf4j#> .
@prefix sesame: <http://www.openrdf.org/schema/sesame#> .
@prefix owl: <http://www.w3.org/2002/07/owl#> .
@prefix xsd: <http://www.w3.org/2001/XMLSchema#> .
@prefix fn: <http://www.w3.org/2005/xpath-functions#> .

<http://purl.uniprot.org/unirules/MF_01625#construct> a <http://www.w3.org/ns/shacl#SPARQLRule>,
    <http://spinrdf.org/sp#Construct>;
  <https://hamap.expasy.org/rdf/vocab#addsTriple> <http://purl.uniprot.org/unirules/MF_01625#construct-template-73>,
    <http://purl.uniprot.org/unirules/MF_01625#construct-template-77>, <http://purl.uniprot.org/unirules/MF_01625#construct-template-39>,
    <http://purl.uniprot.org/unirules/MF_01625#construct-template-27>, <http://purl.uniprot.org/unirules/MF_01625#construct-template-104>,
    <http://purl.uniprot.org/unirules/MF_01625#construct-template-114>, <http://purl.uniprot.org/unirules/MF_01625#construct-template-115>,
    <http://purl.uniprot.org/unirules/MF_01625#construct-template-92>, <http://purl.uniprot.org/unirules/MF_01625#construct-template-43>,
    <http://purl.uniprot.org/unirules/MF_01625#construct-template-44>, <http://purl.uniprot.org/unirules/MF_01625#construct-template-42>,
    <http://purl.uniprot.org/unirules/MF_01625#construct-template-45>, <http://purl.uniprot.org/unirules/MF_01625#construct-template-66>,
    <http://purl.uniprot.org/unirules/MF_01625#construct-template-97>, <http://purl.uniprot.org/unirules/MF_01625#construct-template-88>,
    <http://purl.uniprot.org/unirules/MF_01625#construct-template-108>, <http://purl.uniprot.org/unirules/MF_01625#construct-template-9>,
    <http://purl.uniprot.org/unirules/MF_01625#construct-template-41>, <http://purl.uniprot.org/unirules/MF_01625#construct-template-89>,
    <http://purl.uniprot.org/unirules/MF_01625#construct-template-69>, <http://purl.uniprot.org/unirules/MF_01625#construct-template-65>,
    <http://purl.uniprot.org/unirules/MF_01625#construct-template-81>, <http://purl.uniprot.org/unirules/MF_01625#construct-template-70>,
    <http://purl.uniprot.org/unirules/MF_01625#construct-template-38>, <http://purl.uniprot.org/unirules/MF_01625#construct-template-64>,
    <http://purl.uniprot.org/unirules/MF_01625#construct-template-83>, <http://purl.uniprot.org/unirules/MF_01625#construct-template-40>,
    <http://purl.uniprot.org/unirules/MF_01625#construct-template-49>, <http://purl.uniprot.org/unirules/MF_01625#construct-template-37>,
    <http://purl.uniprot.org/unirules/MF_01625#construct-template-63>, <http://purl.uniprot.org/unirules/MF_01625#construct-template-53>,
    <http://purl.uniprot.org/unirules/MF_01625#construct-template-18>, <http://purl.uniprot.org/unirules/MF_01625#construct-template-19>,
    <http://purl.uniprot.org/unirules/MF_01625#construct-template-16>, <http://purl.uniprot.org/unirules/MF_01625#construct-template-7>,
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    <http://purl.uniprot.org/unirules/MF_01625#construct-template-94>, <http://purl.uniprot.org/unirules/MF_01625#construct-template-107>,
    <http://purl.uniprot.org/unirules/MF_01625#construct-template-86>, <http://purl.uniprot.org/unirules/MF_01625#construct-template-78>,
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  <http://spinrdf.org/sp#templates> <http://purl.uniprot.org/unirules/MF_01625#construct-template-list-0>;
  <http://www.w3.org/ns/shacl#construct> """CONSTRUCT {
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  _:589024 up:source unirule:MF_01625 .
  _:589025 up:source unirule:MF_01625 .
  _:589026 up:source unirule:MF_01625 .
  _:589027 up:source unirule:MF_01625 .
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  _:589044 up:source unirule:MF_01625 .
  _:589045 up:source unirule:MF_01625 .
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  ?this up:alternativeName ?name1 ;
    up:annotation ?annotation3 ,
      ?annotation4 ,
      ?annotation6 ,
      ?annotation7 ,
      ?annotation8 ,
      ?annotation10 ;
    up:classifiedWith GO:0005737 ,
      GO:0016887 ,
      keyword:143 ,
      keyword:378 ,
      keyword:547 ,
      keyword:67 ,
      keyword:963 ;
    up:recommendedName ?name0 .
  ?name0 up:ecName '3.6.1.-' ;
    up:fullName 'Regulatory ATPase RavA' ;
    rdf:type up:Structured_Name .
  ?name1 up:fullName 'Regulatory ATPase variant A' ;
    rdf:type up:Structured_Name .
  ?gene2 skos:prefLabel 'ravA' .
  ?annotation3 a up:Function_Annotation ;
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  ?annotation4 up:activity ?activity5 ;
    rdf:type up:Catalytic_Activity_Annotation .
  ?activity5 up:catalyticActivity <http://rdf.rhea-db.org/13065>.
  ?annotation6 a up:Activity_Regulation_Annotation ;
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  ?annotation7 a up:Subunit_Annotation ;
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  ?annotation8li9 up:cellularComponent <http://purl.uniprot.org/locations/null>.
  ?annotation10 a up:Similarity_Annotation ;
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    rdf:predicate up:classifiedWith ;
    rdf:object keyword:378 .
  _:589060 a rdf:Statement ;
    up:attribution _:589036 ;
    rdf:subject ?this ;
    rdf:predicate up:classifiedWith ;
    rdf:object keyword:547 .
  _:589061 a rdf:Statement ;
    up:attribution _:589037 ;
    rdf:subject ?this ;
    rdf:predicate up:classifiedWith ;
    rdf:object GO:0016887 .
  _:589062 a rdf:Statement ;
    up:attribution _:589038 ;
    rdf:subject ?this ;
    rdf:predicate up:classifiedWith ;
    rdf:object GO:0005737 .
  _:589063 a rdf:Statement ;
    up:source unirule:MF_01625 ;
    rdf:subject ?pfs11 ;
    rdf:predicate up:annotation ;
    rdf:object ?annotation12 .
  _:589064 a rdf:Statement ;
    up:attribution _:589039 ;
    rdf:subject ?pfs11 ;
    rdf:predicate up:annotation ;
    rdf:object ?annotation12 .
  _:589065 a rdf:Statement ;
    up:source unirule:MF_01625 ;
    rdf:subject ?pfs18 ;
    rdf:predicate up:annotation ;
    rdf:object ?annotation19 .
  _:589066 a rdf:Statement ;
    up:attribution _:589040 ;
    rdf:subject ?pfs18 ;
    rdf:predicate up:annotation ;
    rdf:object ?annotation19 .
  _:589067 a rdf:Statement ;
    up:source unirule:MF_01625 ;
    rdf:subject ?pfs25 ;
    rdf:predicate up:annotation ;
    rdf:object ?annotation26 .
  _:589068 a rdf:Statement ;
    up:attribution _:589041 ;
    rdf:subject ?pfs25 ;
    rdf:predicate up:annotation ;
    rdf:object ?annotation26 .
  _:589069 a rdf:Statement ;
    up:source unirule:MF_01625 ;
    rdf:subject ?pfs32 ;
    rdf:predicate up:annotation ;
    rdf:object ?annotation33 .
  _:589070 a rdf:Statement ;
    up:attribution _:589042 ;
    rdf:subject ?pfs32 ;
    rdf:predicate up:annotation ;
    rdf:object ?annotation33 .
  _:589071 a rdf:Statement ;
    up:source unirule:MF_01625 ;
    rdf:subject ?pfs39 ;
    rdf:predicate up:annotation ;
    rdf:object ?annotation40 .
  _:589072 a rdf:Statement ;
    up:attribution _:589043 ;
    rdf:subject ?pfs39 ;
    rdf:predicate up:annotation ;
    rdf:object ?annotation40 .
  _:589073 a rdf:Statement ;
    up:source unirule:MF_01625 ;
    rdf:subject ?pfs46 ;
    rdf:predicate up:annotation ;
    rdf:object ?annotation47 .
  _:589074 a rdf:Statement ;
    up:attribution _:589044 ;
    rdf:subject ?pfs46 ;
    rdf:predicate up:annotation ;
    rdf:object ?annotation47 .
  _:589075 a rdf:Statement ;
    up:source unirule:MF_01625 ;
    rdf:subject ?pfs53 ;
    rdf:predicate up:annotation ;
    rdf:object ?annotation54 .
  _:589076 a rdf:Statement ;
    up:attribution _:589045 ;
    rdf:subject ?pfs53 ;
    rdf:predicate up:annotation ;
    rdf:object ?annotation54 .
  _:589077 a rdf:Statement ;
    up:source unirule:MF_01625 ;
    rdf:subject ?pfs60 ;
    rdf:predicate up:annotation ;
    rdf:object ?annotation61 .
  _:589078 a rdf:Statement ;
    up:attribution _:589046 ;
    rdf:subject ?pfs60 ;
    rdf:predicate up:annotation ;
    rdf:object ?annotation61 .
}
WHERE {
  #baseURI: http://purl.uniprot.org/unirule/MF_01625
  #Rule MF_01625 Created by:? on:2005-12-12 Modified by:Catherine Rivoire on:2025-03-19
  ?this up:organism ?thisOrganism ;
    rdfs:seeAlso signature:MF_01625 .
  ?thisOrganism rdfs:subClassOf+ taxon:91347 .
  BIND(URI(CONCAT(STR(?this), '#MF_01625a0')) AS ?name0) .
  BIND(URI(CONCAT(STR(?this), '#MF_01625a1')) AS ?name1) .
  BIND(URI(CONCAT(STR(?this), '#MF_01625a3')) AS ?annotation3) .
  BIND(URI(CONCAT(STR(?this), '#MF_01625a4')) AS ?annotation4) .
  BIND(URI(CONCAT(STR(?this), '#MF_01625a6')) AS ?annotation6) .
  BIND(URI(CONCAT(STR(?this), '#MF_01625a7')) AS ?annotation7) .
  BIND(URI(CONCAT(STR(?this), '#MF_01625a8')) AS ?annotation8) .
  BIND(URI(CONCAT(STR(?this), '#MF_01625a10')) AS ?annotation10) .
  OPTIONAL {
    ?this up:sequence ?thisSequence .
    ?thisSequence rdf:value ?thisSequenceValue .
    ?templateMotifMatch71 faldo:location ?templateMotifSequenceMatchRegionP3147372 ;
      edam:is_output_of ?templateMotifSequenceProfileAlignmentOperationP3147374 ;
      rdf:type edam:data_0869 ;
      rdf:value ?templateMotifCigarP31473MF_0162567 .
    ?templateMotifSequenceMatchRegionP3147372 faldo:begin ?templateMotifSequenceMatchBeginP3147373 .
    ?templateMotifSequenceMatchBeginP3147373 faldo:position ?templateMotifSequenceMatchBeginPositionP3147368 ;
      faldo:reference isoform:P31473-1 .
    ?templateMotifSequenceProfileAlignmentOperationP3147374 edam:has_input signature:MF_01625 ;
      rdf:type edam:operation_0300 .
    ?targetMotifMatch75 faldo:location ?targetMotifMatchRegionMatch76 ;
      edam:is_output_of ?targetMotifSequenceAlignmentOperationMF_0162578 ;
      rdf:type edam:data_0869 ;
      rdf:value ?targetMotifMatchCigarP31473MF_0162569 .
    ?targetMotifMatchRegionMatch76 faldo:begin ?targetMotifMatchRegionMatchBeginMF_0162577 .
    ?targetMotifMatchRegionMatchBeginMF_0162577 faldo:position ?targetMotifMatchRegionMatchBeginPositionMF_0162570 ;
      faldo:reference ?thisSequence .
    ?targetMotifSequenceAlignmentOperationMF_0162578 edam:has_input signature:MF_01625 ;
      rdf:type edam:operation_0300 .
    BIND(STRLEN(REPLACE(SUBSTR(?templateMotifCigarP31473MF_0162567, 1, (STRLEN(?templateMotifCigarP31473MF_0162567) - STRLEN(REPLACE(?templateMotifCigarP31473MF_0162567, CONCAT('^(?:-*[^-]){', STR(((23 - ?templateMotifSequenceMatchBeginPositionP3147368) + 1)), '}'), '')))), '[a-z]', '')) AS ?step179) .
    BIND((STRLEN(SUBSTR(?targetMotifMatchCigarP31473MF_0162569, 1, (STRLEN(?targetMotifMatchCigarP31473MF_0162569) - STRLEN(REPLACE(?targetMotifMatchCigarP31473MF_0162569, CONCAT('^(?:[a-z]*(?:[A-Z]|-)){', STR(?step179), '}'), ''))))) - STRLEN(REPLACE(SUBSTR(?targetMotifMatchCigarP31473MF_0162569, 1, (STRLEN(?targetMotifMatchCigarP31473MF_0162569) - STRLEN(REPLACE(?targetMotifMatchCigarP31473MF_0162569, CONCAT('^(?:[a-z]*(?:[A-Z]|-)){', STR(?step179), '}'), '')))), '[^-]', ''))) AS ?step280) .
    BIND(((?step280 + ?targetMotifMatchRegionMatchBeginPositionMF_0162570) - 1) AS ?thisPositionOn16) .
    BIND(?thisPositionOn16 AS ?thisPositionOn17) .
    BIND(?this AS ?pfs1t81) .
    BIND(URI(CONCAT(STR(?thisSequence), '#position', STR(?thisPositionOn16))) AS ?pfsb13) .
    BIND(URI(CONCAT(STR(?thisSequence), '#position', STR(?thisPositionOn17))) AS ?pfse14) .
    FILTER ((SUBSTR(?thisSequenceValue, ?thisPositionOn16, 1) = 'Y')) .
    BIND(URI(CONCAT(STR(?this), '#MF_01625a12')) AS ?annotation12) .
    BIND(?this AS ?pfs11) .
  }
  OPTIONAL {
    ?this up:sequence ?thisSequence .
    ?thisSequence rdf:value ?thisSequenceValue .
    ?templateMotifMatch86 faldo:location ?templateMotifSequenceMatchRegionP3147387 ;
      edam:is_output_of ?templateMotifSequenceProfileAlignmentOperationP3147389 ;
      rdf:type edam:data_0869 ;
      rdf:value ?templateMotifCigarP31473MF_0162582 .
    ?templateMotifSequenceMatchRegionP3147387 faldo:begin ?templateMotifSequenceMatchBeginP3147388 .
    ?templateMotifSequenceMatchBeginP3147388 faldo:position ?templateMotifSequenceMatchBeginPositionP3147383 ;
      faldo:reference isoform:P31473-1 .
    ?templateMotifSequenceProfileAlignmentOperationP3147389 edam:has_input signature:MF_01625 ;
      rdf:type edam:operation_0300 .
    ?targetMotifMatch90 faldo:location ?targetMotifMatchRegionMatch91 ;
      edam:is_output_of ?targetMotifSequenceAlignmentOperationMF_0162593 ;
      rdf:type edam:data_0869 ;
      rdf:value ?targetMotifMatchCigarP31473MF_0162584 .
    ?targetMotifMatchRegionMatch91 faldo:begin ?targetMotifMatchRegionMatchBeginMF_0162592 .
    ?targetMotifMatchRegionMatchBeginMF_0162592 faldo:position ?targetMotifMatchRegionMatchBeginPositionMF_0162585 ;
      faldo:reference ?thisSequence .
    ?targetMotifSequenceAlignmentOperationMF_0162593 edam:has_input signature:MF_01625 ;
      rdf:type edam:operation_0300 .
    BIND(STRLEN(REPLACE(SUBSTR(?templateMotifCigarP31473MF_0162582, 1, (STRLEN(?templateMotifCigarP31473MF_0162582) - STRLEN(REPLACE(?templateMotifCigarP31473MF_0162582, CONCAT('^(?:-*[^-]){', STR(((49 - ?templateMotifSequenceMatchBeginPositionP3147383) + 1)), '}'), '')))), '[a-z]', '')) AS ?step194) .
    BIND((STRLEN(SUBSTR(?targetMotifMatchCigarP31473MF_0162584, 1, (STRLEN(?targetMotifMatchCigarP31473MF_0162584) - STRLEN(REPLACE(?targetMotifMatchCigarP31473MF_0162584, CONCAT('^(?:[a-z]*(?:[A-Z]|-)){', STR(?step194), '}'), ''))))) - STRLEN(REPLACE(SUBSTR(?targetMotifMatchCigarP31473MF_0162584, 1, (STRLEN(?targetMotifMatchCigarP31473MF_0162584) - STRLEN(REPLACE(?targetMotifMatchCigarP31473MF_0162584, CONCAT('^(?:[a-z]*(?:[A-Z]|-)){', STR(?step194), '}'), '')))), '[^-]', ''))) AS ?step295) .
    BIND(((?step295 + ?targetMotifMatchRegionMatchBeginPositionMF_0162585) - 1) AS ?thisPositionOn23) .
    BIND(?thisPositionOn23 AS ?thisPositionOn24) .
    BIND(?this AS ?pfs1t96) .
    BIND(URI(CONCAT(STR(?thisSequence), '#position', STR(?thisPositionOn23))) AS ?pfsb20) .
    BIND(URI(CONCAT(STR(?thisSequence), '#position', STR(?thisPositionOn24))) AS ?pfse21) .
    FILTER ((SUBSTR(?thisSequenceValue, ?thisPositionOn23, 1) = 'G')) .
    BIND(URI(CONCAT(STR(?this), '#MF_01625a19')) AS ?annotation19) .
    BIND(?this AS ?pfs18) .
  }
  OPTIONAL {
    ?this up:sequence ?thisSequence .
    ?thisSequence rdf:value ?thisSequenceValue .
    ?templateMotifMatch101 faldo:location ?templateMotifSequenceMatchRegionP31473102 ;
      edam:is_output_of ?templateMotifSequenceProfileAlignmentOperationP31473104 ;
      rdf:type edam:data_0869 ;
      rdf:value ?templateMotifCigarP31473MF_0162597 .
    ?templateMotifSequenceMatchRegionP31473102 faldo:begin ?templateMotifSequenceMatchBeginP31473103 .
    ?templateMotifSequenceMatchBeginP31473103 faldo:position ?templateMotifSequenceMatchBeginPositionP3147398 ;
      faldo:reference isoform:P31473-1 .
    ?templateMotifSequenceProfileAlignmentOperationP31473104 edam:has_input signature:MF_01625 ;
      rdf:type edam:operation_0300 .
    ?targetMotifMatch105 faldo:location ?targetMotifMatchRegionMatch106 ;
      edam:is_output_of ?targetMotifSequenceAlignmentOperationMF_01625108 ;
      rdf:type edam:data_0869 ;
      rdf:value ?targetMotifMatchCigarP31473MF_0162599 .
    ?targetMotifMatchRegionMatch106 faldo:begin ?targetMotifMatchRegionMatchBeginMF_01625107 .
    ?targetMotifMatchRegionMatchBeginMF_01625107 faldo:position ?targetMotifMatchRegionMatchBeginPositionMF_01625100 ;
      faldo:reference ?thisSequence .
    ?targetMotifSequenceAlignmentOperationMF_01625108 edam:has_input signature:MF_01625 ;
      rdf:type edam:operation_0300 .
    BIND(STRLEN(REPLACE(SUBSTR(?templateMotifCigarP31473MF_0162597, 1, (STRLEN(?templateMotifCigarP31473MF_0162597) - STRLEN(REPLACE(?templateMotifCigarP31473MF_0162597, CONCAT('^(?:-*[^-]){', STR(((50 - ?templateMotifSequenceMatchBeginPositionP3147398) + 1)), '}'), '')))), '[a-z]', '')) AS ?step1109) .
    BIND((STRLEN(SUBSTR(?targetMotifMatchCigarP31473MF_0162599, 1, (STRLEN(?targetMotifMatchCigarP31473MF_0162599) - STRLEN(REPLACE(?targetMotifMatchCigarP31473MF_0162599, CONCAT('^(?:[a-z]*(?:[A-Z]|-)){', STR(?step1109), '}'), ''))))) - STRLEN(REPLACE(SUBSTR(?targetMotifMatchCigarP31473MF_0162599, 1, (STRLEN(?targetMotifMatchCigarP31473MF_0162599) - STRLEN(REPLACE(?targetMotifMatchCigarP31473MF_0162599, CONCAT('^(?:[a-z]*(?:[A-Z]|-)){', STR(?step1109), '}'), '')))), '[^-]', ''))) AS ?step2110) .
    BIND(((?step2110 + ?targetMotifMatchRegionMatchBeginPositionMF_01625100) - 1) AS ?thisPositionOn30) .
    BIND(?thisPositionOn30 AS ?thisPositionOn31) .
    BIND(?this AS ?pfs1t111) .
    BIND(URI(CONCAT(STR(?thisSequence), '#position', STR(?thisPositionOn30))) AS ?pfsb27) .
    BIND(URI(CONCAT(STR(?thisSequence), '#position', STR(?thisPositionOn31))) AS ?pfse28) .
    FILTER ((SUBSTR(?thisSequenceValue, ?thisPositionOn30, 1) = 'I')) .
    BIND(URI(CONCAT(STR(?this), '#MF_01625a26')) AS ?annotation26) .
    BIND(?this AS ?pfs25) .
  }
  OPTIONAL {
    ?this up:sequence ?thisSequence .
    ?thisSequence rdf:value ?thisSequenceValue .
    ?templateMotifMatch116 faldo:location ?templateMotifSequenceMatchRegionP31473117 ;
      edam:is_output_of ?templateMotifSequenceProfileAlignmentOperationP31473119 ;
      rdf:type edam:data_0869 ;
      rdf:value ?templateMotifCigarP31473MF_01625112 .
    ?templateMotifSequenceMatchRegionP31473117 faldo:begin ?templateMotifSequenceMatchBeginP31473118 .
    ?templateMotifSequenceMatchBeginP31473118 faldo:position ?templateMotifSequenceMatchBeginPositionP31473113 ;
      faldo:reference isoform:P31473-1 .
    ?templateMotifSequenceProfileAlignmentOperationP31473119 edam:has_input signature:MF_01625 ;
      rdf:type edam:operation_0300 .
    ?targetMotifMatch120 faldo:location ?targetMotifMatchRegionMatch121 ;
      edam:is_output_of ?targetMotifSequenceAlignmentOperationMF_01625123 ;
      rdf:type edam:data_0869 ;
      rdf:value ?targetMotifMatchCigarP31473MF_01625114 .
    ?targetMotifMatchRegionMatch121 faldo:begin ?targetMotifMatchRegionMatchBeginMF_01625122 .
    ?targetMotifMatchRegionMatchBeginMF_01625122 faldo:position ?targetMotifMatchRegionMatchBeginPositionMF_01625115 ;
      faldo:reference ?thisSequence .
    ?targetMotifSequenceAlignmentOperationMF_01625123 edam:has_input signature:MF_01625 ;
      rdf:type edam:operation_0300 .
    BIND(STRLEN(REPLACE(SUBSTR(?templateMotifCigarP31473MF_01625112, 1, (STRLEN(?templateMotifCigarP31473MF_01625112) - STRLEN(REPLACE(?templateMotifCigarP31473MF_01625112, CONCAT('^(?:-*[^-]){', STR(((51 - ?templateMotifSequenceMatchBeginPositionP31473113) + 1)), '}'), '')))), '[a-z]', '')) AS ?step1124) .
    BIND((STRLEN(SUBSTR(?targetMotifMatchCigarP31473MF_01625114, 1, (STRLEN(?targetMotifMatchCigarP31473MF_01625114) - STRLEN(REPLACE(?targetMotifMatchCigarP31473MF_01625114, CONCAT('^(?:[a-z]*(?:[A-Z]|-)){', STR(?step1124), '}'), ''))))) - STRLEN(REPLACE(SUBSTR(?targetMotifMatchCigarP31473MF_01625114, 1, (STRLEN(?targetMotifMatchCigarP31473MF_01625114) - STRLEN(REPLACE(?targetMotifMatchCigarP31473MF_01625114, CONCAT('^(?:[a-z]*(?:[A-Z]|-)){', STR(?step1124), '}'), '')))), '[^-]', ''))) AS ?step2125) .
    BIND(((?step2125 + ?targetMotifMatchRegionMatchBeginPositionMF_01625115) - 1) AS ?thisPositionOn37) .
    BIND(?thisPositionOn37 AS ?thisPositionOn38) .
    BIND(?this AS ?pfs1t126) .
    BIND(URI(CONCAT(STR(?thisSequence), '#position', STR(?thisPositionOn37))) AS ?pfsb34) .
    BIND(URI(CONCAT(STR(?thisSequence), '#position', STR(?thisPositionOn38))) AS ?pfse35) .
    FILTER ((SUBSTR(?thisSequenceValue, ?thisPositionOn37, 1) = 'A')) .
    BIND(URI(CONCAT(STR(?this), '#MF_01625a33')) AS ?annotation33) .
    BIND(?this AS ?pfs32) .
  }
  OPTIONAL {
    ?this up:sequence ?thisSequence .
    ?thisSequence rdf:value ?thisSequenceValue .
    ?templateMotifMatch131 faldo:location ?templateMotifSequenceMatchRegionP31473132 ;
      edam:is_output_of ?templateMotifSequenceProfileAlignmentOperationP31473134 ;
      rdf:type edam:data_0869 ;
      rdf:value ?templateMotifCigarP31473MF_01625127 .
    ?templateMotifSequenceMatchRegionP31473132 faldo:begin ?templateMotifSequenceMatchBeginP31473133 .
    ?templateMotifSequenceMatchBeginP31473133 faldo:position ?templateMotifSequenceMatchBeginPositionP31473128 ;
      faldo:reference isoform:P31473-1 .
    ?templateMotifSequenceProfileAlignmentOperationP31473134 edam:has_input signature:MF_01625 ;
      rdf:type edam:operation_0300 .
    ?targetMotifMatch135 faldo:location ?targetMotifMatchRegionMatch136 ;
      edam:is_output_of ?targetMotifSequenceAlignmentOperationMF_01625138 ;
      rdf:type edam:data_0869 ;
      rdf:value ?targetMotifMatchCigarP31473MF_01625129 .
    ?targetMotifMatchRegionMatch136 faldo:begin ?targetMotifMatchRegionMatchBeginMF_01625137 .
    ?targetMotifMatchRegionMatchBeginMF_01625137 faldo:position ?targetMotifMatchRegionMatchBeginPositionMF_01625130 ;
      faldo:reference ?thisSequence .
    ?targetMotifSequenceAlignmentOperationMF_01625138 edam:has_input signature:MF_01625 ;
      rdf:type edam:operation_0300 .
    BIND(STRLEN(REPLACE(SUBSTR(?templateMotifCigarP31473MF_01625127, 1, (STRLEN(?templateMotifCigarP31473MF_01625127) - STRLEN(REPLACE(?templateMotifCigarP31473MF_01625127, CONCAT('^(?:-*[^-]){', STR(((52 - ?templateMotifSequenceMatchBeginPositionP31473128) + 1)), '}'), '')))), '[a-z]', '')) AS ?step1139) .
    BIND((STRLEN(SUBSTR(?targetMotifMatchCigarP31473MF_01625129, 1, (STRLEN(?targetMotifMatchCigarP31473MF_01625129) - STRLEN(REPLACE(?targetMotifMatchCigarP31473MF_01625129, CONCAT('^(?:[a-z]*(?:[A-Z]|-)){', STR(?step1139), '}'), ''))))) - STRLEN(REPLACE(SUBSTR(?targetMotifMatchCigarP31473MF_01625129, 1, (STRLEN(?targetMotifMatchCigarP31473MF_01625129) - STRLEN(REPLACE(?targetMotifMatchCigarP31473MF_01625129, CONCAT('^(?:[a-z]*(?:[A-Z]|-)){', STR(?step1139), '}'), '')))), '[^-]', ''))) AS ?step2140) .
    BIND(((?step2140 + ?targetMotifMatchRegionMatchBeginPositionMF_01625130) - 1) AS ?thisPositionOn44) .
    BIND(?thisPositionOn44 AS ?thisPositionOn45) .
    BIND(?this AS ?pfs1t141) .
    BIND(URI(CONCAT(STR(?thisSequence), '#position', STR(?thisPositionOn44))) AS ?pfsb41) .
    BIND(URI(CONCAT(STR(?thisSequence), '#position', STR(?thisPositionOn45))) AS ?pfse42) .
    FILTER ((SUBSTR(?thisSequenceValue, ?thisPositionOn44, 1) = 'K')) .
    BIND(URI(CONCAT(STR(?this), '#MF_01625a40')) AS ?annotation40) .
    BIND(?this AS ?pfs39) .
  }
  OPTIONAL {
    ?this up:sequence ?thisSequence .
    ?thisSequence rdf:value ?thisSequenceValue .
    ?templateMotifMatch146 faldo:location ?templateMotifSequenceMatchRegionP31473147 ;
      edam:is_output_of ?templateMotifSequenceProfileAlignmentOperationP31473149 ;
      rdf:type edam:data_0869 ;
      rdf:value ?templateMotifCigarP31473MF_01625142 .
    ?templateMotifSequenceMatchRegionP31473147 faldo:begin ?templateMotifSequenceMatchBeginP31473148 .
    ?templateMotifSequenceMatchBeginP31473148 faldo:position ?templateMotifSequenceMatchBeginPositionP31473143 ;
      faldo:reference isoform:P31473-1 .
    ?templateMotifSequenceProfileAlignmentOperationP31473149 edam:has_input signature:MF_01625 ;
      rdf:type edam:operation_0300 .
    ?targetMotifMatch150 faldo:location ?targetMotifMatchRegionMatch151 ;
      edam:is_output_of ?targetMotifSequenceAlignmentOperationMF_01625153 ;
      rdf:type edam:data_0869 ;
      rdf:value ?targetMotifMatchCigarP31473MF_01625144 .
    ?targetMotifMatchRegionMatch151 faldo:begin ?targetMotifMatchRegionMatchBeginMF_01625152 .
    ?targetMotifMatchRegionMatchBeginMF_01625152 faldo:position ?targetMotifMatchRegionMatchBeginPositionMF_01625145 ;
      faldo:reference ?thisSequence .
    ?targetMotifSequenceAlignmentOperationMF_01625153 edam:has_input signature:MF_01625 ;
      rdf:type edam:operation_0300 .
    BIND(STRLEN(REPLACE(SUBSTR(?templateMotifCigarP31473MF_01625142, 1, (STRLEN(?templateMotifCigarP31473MF_01625142) - STRLEN(REPLACE(?templateMotifCigarP31473MF_01625142, CONCAT('^(?:-*[^-]){', STR(((53 - ?templateMotifSequenceMatchBeginPositionP31473143) + 1)), '}'), '')))), '[a-z]', '')) AS ?step1154) .
    BIND((STRLEN(SUBSTR(?targetMotifMatchCigarP31473MF_01625144, 1, (STRLEN(?targetMotifMatchCigarP31473MF_01625144) - STRLEN(REPLACE(?targetMotifMatchCigarP31473MF_01625144, CONCAT('^(?:[a-z]*(?:[A-Z]|-)){', STR(?step1154), '}'), ''))))) - STRLEN(REPLACE(SUBSTR(?targetMotifMatchCigarP31473MF_01625144, 1, (STRLEN(?targetMotifMatchCigarP31473MF_01625144) - STRLEN(REPLACE(?targetMotifMatchCigarP31473MF_01625144, CONCAT('^(?:[a-z]*(?:[A-Z]|-)){', STR(?step1154), '}'), '')))), '[^-]', ''))) AS ?step2155) .
    BIND(((?step2155 + ?targetMotifMatchRegionMatchBeginPositionMF_01625145) - 1) AS ?thisPositionOn51) .
    BIND(?thisPositionOn51 AS ?thisPositionOn52) .
    BIND(?this AS ?pfs1t156) .
    BIND(URI(CONCAT(STR(?thisSequence), '#position', STR(?thisPositionOn51))) AS ?pfsb48) .
    BIND(URI(CONCAT(STR(?thisSequence), '#position', STR(?thisPositionOn52))) AS ?pfse49) .
    FILTER ((SUBSTR(?thisSequenceValue, ?thisPositionOn51, 1) = 'S')) .
    BIND(URI(CONCAT(STR(?this), '#MF_01625a47')) AS ?annotation47) .
    BIND(?this AS ?pfs46) .
  }
  OPTIONAL {
    ?this up:sequence ?thisSequence .
    ?thisSequence rdf:value ?thisSequenceValue .
    ?templateMotifMatch161 faldo:location ?templateMotifSequenceMatchRegionP31473162 ;
      edam:is_output_of ?templateMotifSequenceProfileAlignmentOperationP31473164 ;
      rdf:type edam:data_0869 ;
      rdf:value ?templateMotifCigarP31473MF_01625157 .
    ?templateMotifSequenceMatchRegionP31473162 faldo:begin ?templateMotifSequenceMatchBeginP31473163 .
    ?templateMotifSequenceMatchBeginP31473163 faldo:position ?templateMotifSequenceMatchBeginPositionP31473158 ;
      faldo:reference isoform:P31473-1 .
    ?templateMotifSequenceProfileAlignmentOperationP31473164 edam:has_input signature:MF_01625 ;
      rdf:type edam:operation_0300 .
    ?targetMotifMatch165 faldo:location ?targetMotifMatchRegionMatch166 ;
      edam:is_output_of ?targetMotifSequenceAlignmentOperationMF_01625168 ;
      rdf:type edam:data_0869 ;
      rdf:value ?targetMotifMatchCigarP31473MF_01625159 .
    ?targetMotifMatchRegionMatch166 faldo:begin ?targetMotifMatchRegionMatchBeginMF_01625167 .
    ?targetMotifMatchRegionMatchBeginMF_01625167 faldo:position ?targetMotifMatchRegionMatchBeginPositionMF_01625160 ;
      faldo:reference ?thisSequence .
    ?targetMotifSequenceAlignmentOperationMF_01625168 edam:has_input signature:MF_01625 ;
      rdf:type edam:operation_0300 .
    BIND(STRLEN(REPLACE(SUBSTR(?templateMotifCigarP31473MF_01625157, 1, (STRLEN(?templateMotifCigarP31473MF_01625157) - STRLEN(REPLACE(?templateMotifCigarP31473MF_01625157, CONCAT('^(?:-*[^-]){', STR(((54 - ?templateMotifSequenceMatchBeginPositionP31473158) + 1)), '}'), '')))), '[a-z]', '')) AS ?step1169) .
    BIND((STRLEN(SUBSTR(?targetMotifMatchCigarP31473MF_01625159, 1, (STRLEN(?targetMotifMatchCigarP31473MF_01625159) - STRLEN(REPLACE(?targetMotifMatchCigarP31473MF_01625159, CONCAT('^(?:[a-z]*(?:[A-Z]|-)){', STR(?step1169), '}'), ''))))) - STRLEN(REPLACE(SUBSTR(?targetMotifMatchCigarP31473MF_01625159, 1, (STRLEN(?targetMotifMatchCigarP31473MF_01625159) - STRLEN(REPLACE(?targetMotifMatchCigarP31473MF_01625159, CONCAT('^(?:[a-z]*(?:[A-Z]|-)){', STR(?step1169), '}'), '')))), '[^-]', ''))) AS ?step2170) .
    BIND(((?step2170 + ?targetMotifMatchRegionMatchBeginPositionMF_01625160) - 1) AS ?thisPositionOn58) .
    BIND(?thisPositionOn58 AS ?thisPositionOn59) .
    BIND(?this AS ?pfs1t171) .
    BIND(URI(CONCAT(STR(?thisSequence), '#position', STR(?thisPositionOn58))) AS ?pfsb55) .
    BIND(URI(CONCAT(STR(?thisSequence), '#position', STR(?thisPositionOn59))) AS ?pfse56) .
    FILTER (REGEX('[LM]', SUBSTR(?thisSequenceValue, ?thisPositionOn58, 1))) .
    BIND(URI(CONCAT(STR(?this), '#MF_01625a54')) AS ?annotation54) .
    BIND(?this AS ?pfs53) .
  }
  OPTIONAL {
    ?this up:sequence ?thisSequence .
    ?thisSequence rdf:value ?thisSequenceValue .
    ?templateMotifMatch176 faldo:location ?templateMotifSequenceMatchRegionP31473177 ;
      edam:is_output_of ?templateMotifSequenceProfileAlignmentOperationP31473179 ;
      rdf:type edam:data_0869 ;
      rdf:value ?templateMotifCigarP31473MF_01625172 .
    ?templateMotifSequenceMatchRegionP31473177 faldo:begin ?templateMotifSequenceMatchBeginP31473178 .
    ?templateMotifSequenceMatchBeginP31473178 faldo:position ?templateMotifSequenceMatchBeginPositionP31473173 ;
      faldo:reference isoform:P31473-1 .
    ?templateMotifSequenceProfileAlignmentOperationP31473179 edam:has_input signature:MF_01625 ;
      rdf:type edam:operation_0300 .
    ?targetMotifMatch180 faldo:location ?targetMotifMatchRegionMatch181 ;
      edam:is_output_of ?targetMotifSequenceAlignmentOperationMF_01625183 ;
      rdf:type edam:data_0869 ;
      rdf:value ?targetMotifMatchCigarP31473MF_01625174 .
    ?targetMotifMatchRegionMatch181 faldo:begin ?targetMotifMatchRegionMatchBeginMF_01625182 .
    ?targetMotifMatchRegionMatchBeginMF_01625182 faldo:position ?targetMotifMatchRegionMatchBeginPositionMF_01625175 ;
      faldo:reference ?thisSequence .
    ?targetMotifSequenceAlignmentOperationMF_01625183 edam:has_input signature:MF_01625 ;
      rdf:type edam:operation_0300 .
    BIND(STRLEN(REPLACE(SUBSTR(?templateMotifCigarP31473MF_01625172, 1, (STRLEN(?templateMotifCigarP31473MF_01625172) - STRLEN(REPLACE(?templateMotifCigarP31473MF_01625172, CONCAT('^(?:-*[^-]){', STR(((196 - ?templateMotifSequenceMatchBeginPositionP31473173) + 1)), '}'), '')))), '[a-z]', '')) AS ?step1184) .
    BIND((STRLEN(SUBSTR(?targetMotifMatchCigarP31473MF_01625174, 1, (STRLEN(?targetMotifMatchCigarP31473MF_01625174) - STRLEN(REPLACE(?targetMotifMatchCigarP31473MF_01625174, CONCAT('^(?:[a-z]*(?:[A-Z]|-)){', STR(?step1184), '}'), ''))))) - STRLEN(REPLACE(SUBSTR(?targetMotifMatchCigarP31473MF_01625174, 1, (STRLEN(?targetMotifMatchCigarP31473MF_01625174) - STRLEN(REPLACE(?targetMotifMatchCigarP31473MF_01625174, CONCAT('^(?:[a-z]*(?:[A-Z]|-)){', STR(?step1184), '}'), '')))), '[^-]', ''))) AS ?step2185) .
    BIND(((?step2185 + ?targetMotifMatchRegionMatchBeginPositionMF_01625175) - 1) AS ?thisPositionOn65) .
    BIND(?thisPositionOn65 AS ?thisPositionOn66) .
    BIND(?this AS ?pfs1t186) .
    BIND(URI(CONCAT(STR(?thisSequence), '#position', STR(?thisPositionOn65))) AS ?pfsb62) .
    BIND(URI(CONCAT(STR(?thisSequence), '#position', STR(?thisPositionOn66))) AS ?pfse63) .
    FILTER (REGEX('[ED]', SUBSTR(?thisSequenceValue, ?thisPositionOn65, 1))) .
    BIND(URI(CONCAT(STR(?this), '#MF_01625a61')) AS ?annotation61) .
    BIND(?this AS ?pfs60) .
  }
}
""" .

<http://purl.uniprot.org/unirules/MF_01625> <http://www.w3.org/ns/shacl#rule> <http://purl.uniprot.org/unirules/MF_01625#construct> .