CONSTRUCT { _:592814 up:source unirule:MF_01631 . _:592815 up:ecName '2.7.7.23' ; up:fullName 'UDP-N-acetylglucosamine pyrophosphorylase' ; rdf:type up:Structured_Name . _:592816 up:fullName 'N-acetylglucosamine-1-phosphate uridyltransferase' ; rdf:type up:Structured_Name . _:592817 up:source unirule:MF_01631 . _:592818 up:ecName '2.3.1.157' ; up:fullName 'Glucosamine-1-phosphate N-acetyltransferase' ; rdf:type up:Structured_Name . _:592819 up:source unirule:MF_01631 . _:592820 up:source unirule:MF_01631 . _:592821 up:source unirule:MF_01631 . _:592822 up:source unirule:MF_01631 . _:592823 up:source unirule:MF_01631 . _:592824 up:source unirule:MF_01631 . _:592825 up:source unirule:MF_01631 . _:592826 up:source unirule:MF_01631 . _:592827 up:source unirule:MF_01631 . _:592828 up:source unirule:MF_01631 . _:592829 up:source unirule:MF_01631 . _:592830 up:source unirule:MF_01631 . _:592831 up:source unirule:MF_01631 . _:592832 up:source unirule:MF_01631 . _:592833 up:source unirule:MF_01631 . _:592834 up:source unirule:MF_01631 . _:592835 up:source unirule:MF_01631 . _:592836 up:source unirule:MF_01631 . _:592837 up:source unirule:MF_01631 . _:592838 up:source unirule:MF_01631 . _:592839 up:source unirule:MF_01631 . _:592840 up:source unirule:MF_01631 . _:592841 up:source unirule:MF_01631 . _:592842 up:source unirule:MF_01631 . _:592843 up:source unirule:MF_01631 . _:592844 up:source unirule:MF_01631 . _:592845 up:source unirule:MF_01631 . _:592846 up:source unirule:MF_01631 . _:592847 up:source unirule:MF_01631 . _:592848 up:source unirule:MF_01631 . _:592849 up:source unirule:MF_01631 . _:592850 up:source unirule:MF_01631 . _:592851 up:source unirule:MF_01631 . _:592852 up:source unirule:MF_01631 . _:592853 up:source unirule:MF_01631 . _:592854 up:source unirule:MF_01631 . _:592855 up:source unirule:MF_01631 . _:592856 up:source unirule:MF_01631 . _:592857 up:source unirule:MF_01631 . _:592858 up:source unirule:MF_01631 . _:592859 up:source unirule:MF_01631 . _:592860 up:source unirule:MF_01631 . _:592861 up:source unirule:MF_01631 . _:592862 up:source unirule:MF_01631 . _:592863 up:source unirule:MF_01631 . _:592864 up:source unirule:MF_01631 . _:592865 up:source unirule:MF_01631 . _:592866 up:source unirule:MF_01631 . _:592867 up:source unirule:MF_01631 . _:592868 up:source unirule:MF_01631 . _:592869 up:source unirule:MF_01631 . _:592870 up:source unirule:MF_01631 . _:592871 up:source unirule:MF_01631 . _:592872 up:source unirule:MF_01631 . _:592873 up:source unirule:MF_01631 . ?this up:annotation ?annotation4 , ?annotation5 , ?annotation7 , ?annotation9 , ?annotation10 , ?annotation11 , ?annotation12 , ?annotation13 , ?annotation14 , ?annotation16 , ?annotation17 ; up:classifiedWith GO:0000287 , GO:0000902 , GO:0003977 , GO:0005737 , GO:0009245 , GO:0009252 , GO:0019134 , keyword:12 , keyword:133 , keyword:460 , keyword:479 , keyword:511 , keyword:548 , keyword:573 , keyword:677 , keyword:808 , keyword:961 , keyword:963 ; up:domain ?namedpart1 , ?namedpart2 ; up:recommendedName ?name0 . ?name0 up:fullName 'Bifunctional protein GlmU' ; rdf:type up:Structured_Name . ?namedpart1 up:alternativeName _:592816 ; up:recommendedName _:592815 . ?namedpart2 up:recommendedName _:592818 . ?gene3 skos:prefLabel 'glmU' . ?annotation4 a up:Function_Annotation ; rdfs:comment 'Catalyzes the last two sequential reactions in the de novo biosynthetic pathway for UDP-N-acetylglucosamine (UDP-GlcNAc). The C-terminal domain catalyzes the transfer of acetyl group from acetyl coenzyme A to glucosamine-1-phosphate (GlcN-1-P) to produce N-acetylglucosamine-1-phosphate (GlcNAc-1-P), which is converted into UDP-GlcNAc by the transfer of uridine 5-monophosphate (from uridine 5-triphosphate), a reaction catalyzed by the N-terminal domain.' . ?annotation5 up:activity ?activity6 ; rdf:type up:Catalytic_Activity_Annotation . ?activity6 up:catalyticActivity <http://rdf.rhea-db.org/13725>; up:enzymeClass <http://purl.uniprot.org/enzyme/2.3.1.157>. ?annotation7 up:activity ?activity8 ; rdf:type up:Catalytic_Activity_Annotation . ?activity8 up:catalyticActivity <http://rdf.rhea-db.org/13509>; up:enzymeClass <http://purl.uniprot.org/enzyme/2.7.7.23>. ?annotation9 up:cofactor chebi:18420 ; rdf:type up:Cofactor_Annotation ; rdfs:comment 'Binds 1 Mg(2+) ion per subunit.' . ?annotation10 a up:Pathway_Annotation ; rdfs:comment 'Nucleotide-sugar biosynthesis; UDP-N-acetyl-alpha-D-glucosamine biosynthesis; N-acetyl-alpha-D-glucosamine 1-phosphate from alpha-D-glucosamine 6-phosphate (route II): step 2/2.' . ?annotation11 a up:Pathway_Annotation ; rdfs:comment 'Nucleotide-sugar biosynthesis; UDP-N-acetyl-alpha-D-glucosamine biosynthesis; UDP-N-acetyl-alpha-D-glucosamine from N-acetyl-alpha-D-glucosamine 1-phosphate: step 1/1.' . ?annotation12 a up:Pathway_Annotation ; rdfs:comment 'Bacterial outer membrane biogenesis; LPS lipid A biosynthesis.' . ?annotation13 a up:Subunit_Annotation ; rdfs:comment 'Homotrimer.' . ?annotation14 a up:Subcellular_Location_Annotation . ?annotation14li15 up:cellularComponent <http://purl.uniprot.org/locations/null>. ?annotation16 a up:Similarity_Annotation ; rdfs:comment 'In the N-terminal section; belongs to the N-acetylglucosamine-1-phosphate uridyltransferase family.' . ?annotation17 a up:Similarity_Annotation ; rdfs:comment 'In the C-terminal section; belongs to the transferase hexapeptide repeat family.' . ?pfs18 up:annotation ?annotation19 . ?annotation19 faldo:begin ?pfsb20 ; faldo:end ?pfse21 ; rdf:type up:Region_Annotation ; rdfs:comment 'Pyrophosphorylase' . ?pfsb20 faldo:position ?thisPositionOn22 ; rdf:type faldo:ExactPosition . ?pfse21 faldo:position ?thisPositionOn23 ; rdf:type faldo:ExactPosition . ?pfs24 up:annotation ?annotation25 . ?annotation25 faldo:begin ?pfsb26 ; faldo:end ?pfse27 ; rdf:type up:Region_Annotation ; rdfs:comment 'Linker' . ?pfsb26 faldo:position ?thisPositionOn28 ; rdf:type faldo:ExactPosition . ?pfse27 faldo:position ?thisPositionOn29 ; rdf:type faldo:ExactPosition . ?pfs30 up:annotation ?annotation31 . ?annotation31 faldo:begin ?pfsb32 ; faldo:end ?pfse33 ; rdf:type up:Region_Annotation ; rdfs:comment 'N-acetyltransferase' . ?pfsb32 faldo:position ?thisPositionOn34 ; rdf:type faldo:ExactPosition . ?pfse33 faldo:position ?thisPositionOn35 ; rdf:type faldo:ExactPosition . ?pfs36 up:annotation ?annotation37 . ?annotation37 faldo:begin ?pfsb38 ; faldo:end ?pfse39 ; up:ligand ?ligand40 ; rdf:type up:Binding_Site_Annotation . ?pfsb38 faldo:position ?thisPositionOn41 ; rdf:type faldo:ExactPosition . ?pfse39 faldo:position ?thisPositionOn42 ; rdf:type faldo:ExactPosition . ?ligand40 rdfs:subClassOf chebi:57705 . ?pfs43 up:annotation ?annotation44 . ?annotation44 faldo:begin ?pfsb45 ; faldo:end ?pfse46 ; up:ligand ?ligand47 ; rdf:type up:Binding_Site_Annotation . ?pfsb45 faldo:position ?thisPositionOn48 ; rdf:type faldo:ExactPosition . ?pfse46 faldo:position ?thisPositionOn49 ; rdf:type faldo:ExactPosition . ?ligand47 rdfs:subClassOf chebi:57705 . ?pfs50 up:annotation ?annotation51 . ?annotation51 faldo:begin ?pfsb52 ; faldo:end ?pfse53 ; up:ligand ?ligand54 ; rdf:type up:Binding_Site_Annotation . ?pfsb52 faldo:position ?thisPositionOn55 ; rdf:type faldo:ExactPosition . ?pfse53 faldo:position ?thisPositionOn56 ; rdf:type faldo:ExactPosition . ?ligand54 rdfs:subClassOf chebi:57705 . ?pfs57 up:annotation ?annotation58 . ?annotation58 faldo:begin ?pfsb59 ; faldo:end ?pfse60 ; up:ligand ?ligand61 ; rdf:type up:Binding_Site_Annotation . ?pfsb59 faldo:position ?thisPositionOn62 ; rdf:type faldo:ExactPosition . ?pfse60 faldo:position ?thisPositionOn63 ; rdf:type faldo:ExactPosition . ?ligand61 rdfs:subClassOf chebi:57288 . ?pfs64 up:annotation ?annotation65 . ?annotation65 faldo:begin ?pfsb66 ; faldo:end ?pfse67 ; rdf:type up:Active_Site_Annotation ; rdfs:comment 'Proton acceptor' . ?pfsb66 faldo:position ?thisPositionOn68 ; rdf:type faldo:ExactPosition . ?pfse67 faldo:position ?thisPositionOn69 ; rdf:type faldo:ExactPosition . ?pfs70 up:annotation ?annotation71 . ?annotation71 faldo:begin ?pfsb72 ; faldo:end ?pfse73 ; up:ligand ?ligand74 ; rdf:type up:Binding_Site_Annotation . ?pfsb72 faldo:position ?thisPositionOn75 ; rdf:type faldo:ExactPosition . ?pfse73 faldo:position ?thisPositionOn76 ; rdf:type faldo:ExactPosition . ?ligand74 rdfs:subClassOf chebi:18420 . ?pfs77 up:annotation ?annotation78 . ?annotation78 faldo:begin ?pfsb79 ; faldo:end ?pfse80 ; up:ligand ?ligand81 ; rdf:type up:Binding_Site_Annotation . ?pfsb79 faldo:position ?thisPositionOn82 ; rdf:type faldo:ExactPosition . ?pfse80 faldo:position ?thisPositionOn83 ; rdf:type faldo:ExactPosition . ?ligand81 rdfs:subClassOf chebi:18420 . ?pfs84 up:annotation ?annotation85 . ?annotation85 faldo:begin ?pfsb86 ; faldo:end ?pfse87 ; up:ligand ?ligand88 ; rdf:type up:Binding_Site_Annotation . ?pfsb86 faldo:position ?thisPositionOn89 ; rdf:type faldo:ExactPosition . ?pfse87 faldo:position ?thisPositionOn90 ; rdf:type faldo:ExactPosition . ?ligand88 rdfs:subClassOf chebi:57705 . ?pfs91 up:annotation ?annotation92 . ?annotation92 faldo:begin ?pfsb93 ; faldo:end ?pfse94 ; up:ligand ?ligand95 ; rdf:type up:Binding_Site_Annotation . ?pfsb93 faldo:position ?thisPositionOn96 ; rdf:type faldo:ExactPosition . ?pfse94 faldo:position ?thisPositionOn97 ; rdf:type faldo:ExactPosition . ?ligand95 rdfs:subClassOf chebi:57705 . ?pfs98 up:annotation ?annotation99 . ?annotation99 faldo:begin ?pfsb100 ; faldo:end ?pfse101 ; up:ligand ?ligand102 ; rdf:type up:Binding_Site_Annotation . ?pfsb100 faldo:position ?thisPositionOn103 ; rdf:type faldo:ExactPosition . ?pfse101 faldo:position ?thisPositionOn104 ; rdf:type faldo:ExactPosition . ?ligand102 rdfs:subClassOf chebi:57705 . ?pfs105 up:annotation ?annotation106 . ?annotation106 faldo:begin ?pfsb107 ; faldo:end ?pfse108 ; up:ligand ?ligand109 ; rdf:type up:Binding_Site_Annotation . ?pfsb107 faldo:position ?thisPositionOn110 ; rdf:type faldo:ExactPosition . ?pfse108 faldo:position ?thisPositionOn111 ; rdf:type faldo:ExactPosition . ?ligand109 rdfs:subClassOf chebi:57705 . ?pfs112 up:annotation ?annotation113 . ?annotation113 faldo:begin ?pfsb114 ; faldo:end ?pfse115 ; up:ligand ?ligand116 ; rdf:type up:Binding_Site_Annotation . ?pfsb114 faldo:position ?thisPositionOn117 ; rdf:type faldo:ExactPosition . ?pfse115 faldo:position ?thisPositionOn118 ; rdf:type faldo:ExactPosition . ?ligand116 rdfs:subClassOf chebi:57705 . ?pfs119 up:annotation ?annotation120 . ?annotation120 faldo:begin ?pfsb121 ; faldo:end ?pfse122 ; up:ligand ?ligand123 ; rdf:type up:Binding_Site_Annotation . ?pfsb121 faldo:position ?thisPositionOn124 ; rdf:type faldo:ExactPosition . ?pfse122 faldo:position ?thisPositionOn125 ; rdf:type faldo:ExactPosition . ?ligand123 rdfs:subClassOf chebi:57705 . ?pfs126 up:annotation ?annotation127 . ?annotation127 faldo:begin ?pfsb128 ; faldo:end ?pfse129 ; up:ligand ?ligand130 ; rdf:type up:Binding_Site_Annotation . ?pfsb128 faldo:position ?thisPositionOn131 ; rdf:type faldo:ExactPosition . ?pfse129 faldo:position ?thisPositionOn132 ; rdf:type faldo:ExactPosition . ?ligand130 rdfs:subClassOf chebi:57705 . ?pfs133 up:annotation ?annotation134 . ?annotation134 faldo:begin ?pfsb135 ; faldo:end ?pfse136 ; up:ligand ?ligand137 ; rdf:type up:Binding_Site_Annotation . ?pfsb135 faldo:position ?thisPositionOn138 ; rdf:type faldo:ExactPosition . ?pfse136 faldo:position ?thisPositionOn139 ; rdf:type faldo:ExactPosition . ?ligand137 rdfs:subClassOf chebi:57705 . ?pfs140 up:annotation ?annotation141 . ?annotation141 faldo:begin ?pfsb142 ; faldo:end ?pfse143 ; up:ligand ?ligand144 ; rdf:type up:Binding_Site_Annotation . ?pfsb142 faldo:position ?thisPositionOn145 ; rdf:type faldo:ExactPosition . ?pfse143 faldo:position ?thisPositionOn146 ; rdf:type faldo:ExactPosition . ?ligand144 rdfs:subClassOf chebi:57705 . ?pfs147 up:annotation ?annotation148 . ?annotation148 faldo:begin ?pfsb149 ; faldo:end ?pfse150 ; up:ligand ?ligand151 ; rdf:type up:Binding_Site_Annotation . ?pfsb149 faldo:position ?thisPositionOn152 ; rdf:type faldo:ExactPosition . ?pfse150 faldo:position ?thisPositionOn153 ; rdf:type faldo:ExactPosition . ?ligand151 rdfs:subClassOf chebi:57705 . ?pfs154 up:annotation ?annotation155 . ?annotation155 faldo:begin ?pfsb156 ; faldo:end ?pfse157 ; up:ligand ?ligand158 ; rdf:type up:Binding_Site_Annotation . ?pfsb156 faldo:position ?thisPositionOn159 ; rdf:type faldo:ExactPosition . ?pfse157 faldo:position ?thisPositionOn160 ; rdf:type faldo:ExactPosition . ?ligand158 rdfs:subClassOf chebi:57288 . ?pfs161 up:annotation ?annotation162 . ?annotation162 faldo:begin ?pfsb163 ; faldo:end ?pfse164 ; up:ligand ?ligand165 ; rdf:type up:Binding_Site_Annotation . ?pfsb163 faldo:position ?thisPositionOn166 ; rdf:type faldo:ExactPosition . ?pfse164 faldo:position ?thisPositionOn167 ; rdf:type faldo:ExactPosition . ?ligand165 rdfs:subClassOf chebi:57288 . ?pfs168 up:annotation ?annotation169 . ?annotation169 faldo:begin ?pfsb170 ; faldo:end ?pfse171 ; up:ligand ?ligand172 ; rdf:type up:Binding_Site_Annotation . ?pfsb170 faldo:position ?thisPositionOn173 ; rdf:type faldo:ExactPosition . ?pfse171 faldo:position ?thisPositionOn174 ; rdf:type faldo:ExactPosition . ?ligand172 rdfs:subClassOf chebi:57288 . ?pfs175 up:annotation ?annotation176 . ?annotation176 faldo:begin ?pfsb177 ; faldo:end ?pfse178 ; up:ligand ?ligand179 ; rdf:type up:Binding_Site_Annotation . ?pfsb177 faldo:position ?thisPositionOn180 ; rdf:type faldo:ExactPosition . ?pfse178 faldo:position ?thisPositionOn181 ; rdf:type faldo:ExactPosition . ?ligand179 rdfs:subClassOf chebi:57288 . _:592874 a rdf:Statement ; up:attribution _:592814 ; rdf:subject ?this ; rdf:predicate up:recommendedName ; rdf:object ?name0 . _:592875 a rdf:Statement ; up:attribution _:592817 ; rdf:subject ?this ; rdf:predicate up:domain ; rdf:object ?namedpart1 . _:592876 a rdf:Statement ; up:attribution _:592819 ; rdf:subject ?this ; rdf:predicate up:domain ; rdf:object ?namedpart2 . _:592877 a rdf:Statement ; up:attribution _:592820 ; rdf:subject ?gene3 ; rdf:predicate up:encodedBy ; rdf:object ?gene3 . _:592878 a rdf:Statement ; up:attribution _:592821 ; rdf:subject ?this ; rdf:predicate up:annotation ; rdf:object ?annotation4 . _:592879 a rdf:Statement ; up:attribution _:592822 ; rdf:subject ?this ; rdf:predicate up:annotation ; rdf:object ?annotation5 . _:592880 a rdf:Statement ; up:attribution _:592823 ; rdf:subject ?this ; rdf:predicate up:annotation ; rdf:object ?annotation7 . _:592881 a rdf:Statement ; up:attribution _:592824 ; rdf:subject ?this ; rdf:predicate up:annotation ; rdf:object ?annotation9 . _:592882 a rdf:Statement ; up:attribution _:592825 ; rdf:subject ?this ; rdf:predicate up:annotation ; rdf:object ?annotation10 . _:592883 a rdf:Statement ; up:attribution _:592826 ; rdf:subject ?this ; rdf:predicate up:annotation ; rdf:object ?annotation11 . _:592884 a rdf:Statement ; up:attribution _:592827 ; rdf:subject ?this ; rdf:predicate up:annotation ; rdf:object ?annotation12 . _:592885 a rdf:Statement ; up:attribution _:592828 ; rdf:subject ?this ; rdf:predicate up:annotation ; rdf:object ?annotation13 . _:592886 a rdf:Statement ; up:attribution _:592829 ; rdf:subject ?this ; rdf:predicate up:annotation ; rdf:object ?annotation14 . _:592887 a rdf:Statement ; up:attribution _:592830 ; rdf:subject ?this ; rdf:predicate up:annotation ; rdf:object ?annotation16 . _:592888 a rdf:Statement ; up:attribution _:592831 ; rdf:subject ?this ; rdf:predicate up:annotation ; rdf:object ?annotation17 . _:592889 a rdf:Statement ; up:attribution _:592832 ; rdf:subject ?this ; rdf:predicate up:classifiedWith ; rdf:object keyword:963 . _:592890 a rdf:Statement ; up:attribution _:592833 ; rdf:subject ?this ; rdf:predicate up:classifiedWith ; rdf:object keyword:12 . _:592891 a rdf:Statement ; up:attribution _:592834 ; rdf:subject ?this ; rdf:predicate up:classifiedWith ; rdf:object keyword:133 . _:592892 a rdf:Statement ; up:attribution _:592835 ; rdf:subject ?this ; rdf:predicate up:classifiedWith ; rdf:object keyword:961 . _:592893 a rdf:Statement ; up:attribution _:592836 ; rdf:subject ?this ; rdf:predicate up:classifiedWith ; rdf:object keyword:460 . _:592894 a rdf:Statement ; up:attribution _:592837 ; rdf:subject ?this ; rdf:predicate up:classifiedWith ; rdf:object keyword:479 . _:592895 a rdf:Statement ; up:attribution _:592838 ; rdf:subject ?this ; rdf:predicate up:classifiedWith ; rdf:object keyword:511 . _:592896 a rdf:Statement ; up:attribution _:592839 ; rdf:subject ?this ; rdf:predicate up:classifiedWith ; rdf:object keyword:548 . _:592897 a rdf:Statement ; up:attribution _:592840 ; rdf:subject ?this ; rdf:predicate up:classifiedWith ; rdf:object keyword:573 . _:592898 a rdf:Statement ; up:attribution _:592841 ; rdf:subject ?this ; rdf:predicate up:classifiedWith ; rdf:object keyword:677 . _:592899 a rdf:Statement ; up:attribution _:592842 ; rdf:subject ?this ; rdf:predicate up:classifiedWith ; rdf:object keyword:808 . _:592900 a rdf:Statement ; up:attribution _:592843 ; rdf:subject ?this ; rdf:predicate up:classifiedWith ; rdf:object GO:0000287 . _:592901 a rdf:Statement ; up:attribution _:592844 ; rdf:subject ?this ; rdf:predicate up:classifiedWith ; rdf:object GO:0003977 . _:592902 a rdf:Statement ; up:attribution _:592845 ; rdf:subject ?this ; rdf:predicate up:classifiedWith ; rdf:object GO:0019134 . _:592903 a rdf:Statement ; up:attribution _:592846 ; rdf:subject ?this ; rdf:predicate up:classifiedWith ; rdf:object GO:0000902 . _:592904 a rdf:Statement ; up:attribution _:592847 ; rdf:subject ?this ; rdf:predicate up:classifiedWith ; rdf:object GO:0009252 . _:592905 a rdf:Statement ; up:attribution _:592848 ; rdf:subject ?this ; rdf:predicate up:classifiedWith ; rdf:object GO:0009245 . _:592906 a rdf:Statement ; up:attribution _:592849 ; rdf:subject ?this ; rdf:predicate up:classifiedWith ; rdf:object GO:0005737 . _:592907 a rdf:Statement ; up:source unirule:MF_01631 ; rdf:subject ?pfs18 ; rdf:predicate up:annotation ; rdf:object ?annotation19 . _:592908 a rdf:Statement ; up:attribution _:592850 ; rdf:subject ?pfs18 ; rdf:predicate up:annotation ; rdf:object ?annotation19 . _:592909 a rdf:Statement ; up:source unirule:MF_01631 ; rdf:subject ?pfs24 ; rdf:predicate up:annotation ; rdf:object ?annotation25 . _:592910 a rdf:Statement ; up:attribution _:592851 ; rdf:subject ?pfs24 ; rdf:predicate up:annotation ; rdf:object ?annotation25 . _:592911 a rdf:Statement ; up:source unirule:MF_01631 ; rdf:subject ?pfs30 ; rdf:predicate up:annotation ; rdf:object ?annotation31 . _:592912 a rdf:Statement ; up:attribution _:592852 ; rdf:subject ?pfs30 ; rdf:predicate up:annotation ; rdf:object ?annotation31 . _:592913 a rdf:Statement ; up:source unirule:MF_01631 ; rdf:subject ?pfs36 ; rdf:predicate up:annotation ; rdf:object ?annotation37 . _:592914 a rdf:Statement ; up:attribution _:592853 ; rdf:subject ?pfs36 ; rdf:predicate up:annotation ; rdf:object ?annotation37 . _:592915 a rdf:Statement ; up:source unirule:MF_01631 ; rdf:subject ?pfs43 ; rdf:predicate up:annotation ; rdf:object ?annotation44 . _:592916 a rdf:Statement ; up:attribution _:592854 ; rdf:subject ?pfs43 ; rdf:predicate up:annotation ; rdf:object ?annotation44 . _:592917 a rdf:Statement ; up:source unirule:MF_01631 ; rdf:subject ?pfs50 ; rdf:predicate up:annotation ; rdf:object ?annotation51 . _:592918 a rdf:Statement ; up:attribution _:592855 ; rdf:subject ?pfs50 ; rdf:predicate up:annotation ; rdf:object ?annotation51 . _:592919 a rdf:Statement ; up:source unirule:MF_01631 ; rdf:subject ?pfs57 ; rdf:predicate up:annotation ; rdf:object ?annotation58 . _:592920 a rdf:Statement ; up:attribution _:592856 ; rdf:subject ?pfs57 ; rdf:predicate up:annotation ; rdf:object ?annotation58 . _:592921 a rdf:Statement ; up:source unirule:MF_01631 ; rdf:subject ?pfs64 ; rdf:predicate up:annotation ; rdf:object ?annotation65 . _:592922 a rdf:Statement ; up:attribution _:592857 ; rdf:subject ?pfs64 ; rdf:predicate up:annotation ; rdf:object ?annotation65 . _:592923 a rdf:Statement ; up:source unirule:MF_01631 ; rdf:subject ?pfs70 ; rdf:predicate up:annotation ; rdf:object ?annotation71 . _:592924 a rdf:Statement ; up:attribution _:592858 ; rdf:subject ?pfs70 ; rdf:predicate up:annotation ; rdf:object ?annotation71 . _:592925 a rdf:Statement ; up:source unirule:MF_01631 ; rdf:subject ?pfs77 ; rdf:predicate up:annotation ; rdf:object ?annotation78 . _:592926 a rdf:Statement ; up:attribution _:592859 ; rdf:subject ?pfs77 ; rdf:predicate up:annotation ; rdf:object ?annotation78 . _:592927 a rdf:Statement ; up:source unirule:MF_01631 ; rdf:subject ?pfs84 ; rdf:predicate up:annotation ; rdf:object ?annotation85 . _:592928 a rdf:Statement ; up:attribution _:592860 ; rdf:subject ?pfs84 ; rdf:predicate up:annotation ; rdf:object ?annotation85 . _:592929 a rdf:Statement ; up:source unirule:MF_01631 ; rdf:subject ?pfs91 ; rdf:predicate up:annotation ; rdf:object ?annotation92 . _:592930 a rdf:Statement ; up:attribution _:592861 ; rdf:subject ?pfs91 ; rdf:predicate up:annotation ; rdf:object ?annotation92 . _:592931 a rdf:Statement ; up:source unirule:MF_01631 ; rdf:subject ?pfs98 ; rdf:predicate up:annotation ; rdf:object ?annotation99 . _:592932 a rdf:Statement ; up:attribution _:592862 ; rdf:subject ?pfs98 ; rdf:predicate up:annotation ; rdf:object ?annotation99 . _:592933 a rdf:Statement ; up:source unirule:MF_01631 ; rdf:subject ?pfs105 ; rdf:predicate up:annotation ; rdf:object ?annotation106 . _:592934 a rdf:Statement ; up:attribution _:592863 ; rdf:subject ?pfs105 ; rdf:predicate up:annotation ; rdf:object ?annotation106 . _:592935 a rdf:Statement ; up:source unirule:MF_01631 ; rdf:subject ?pfs112 ; rdf:predicate up:annotation ; rdf:object ?annotation113 . _:592936 a rdf:Statement ; up:attribution _:592864 ; rdf:subject ?pfs112 ; rdf:predicate up:annotation ; rdf:object ?annotation113 . _:592937 a rdf:Statement ; up:source unirule:MF_01631 ; rdf:subject ?pfs119 ; rdf:predicate up:annotation ; rdf:object ?annotation120 . _:592938 a rdf:Statement ; up:attribution _:592865 ; rdf:subject ?pfs119 ; rdf:predicate up:annotation ; rdf:object ?annotation120 . _:592939 a rdf:Statement ; up:source unirule:MF_01631 ; rdf:subject ?pfs126 ; rdf:predicate up:annotation ; rdf:object ?annotation127 . _:592940 a rdf:Statement ; up:attribution _:592866 ; rdf:subject ?pfs126 ; rdf:predicate up:annotation ; rdf:object ?annotation127 . _:592941 a rdf:Statement ; up:source unirule:MF_01631 ; rdf:subject ?pfs133 ; rdf:predicate up:annotation ; rdf:object ?annotation134 . _:592942 a rdf:Statement ; up:attribution _:592867 ; rdf:subject ?pfs133 ; rdf:predicate up:annotation ; rdf:object ?annotation134 . _:592943 a rdf:Statement ; up:source unirule:MF_01631 ; rdf:subject ?pfs140 ; rdf:predicate up:annotation ; rdf:object ?annotation141 . _:592944 a rdf:Statement ; up:attribution _:592868 ; rdf:subject ?pfs140 ; rdf:predicate up:annotation ; rdf:object ?annotation141 . _:592945 a rdf:Statement ; up:source unirule:MF_01631 ; rdf:subject ?pfs147 ; rdf:predicate up:annotation ; rdf:object ?annotation148 . _:592946 a rdf:Statement ; up:attribution _:592869 ; rdf:subject ?pfs147 ; rdf:predicate up:annotation ; rdf:object ?annotation148 . _:592947 a rdf:Statement ; up:source unirule:MF_01631 ; rdf:subject ?pfs154 ; rdf:predicate up:annotation ; rdf:object ?annotation155 . _:592948 a rdf:Statement ; up:attribution _:592870 ; rdf:subject ?pfs154 ; rdf:predicate up:annotation ; rdf:object ?annotation155 . _:592949 a rdf:Statement ; up:source unirule:MF_01631 ; rdf:subject ?pfs161 ; rdf:predicate up:annotation ; rdf:object ?annotation162 . _:592950 a rdf:Statement ; up:attribution _:592871 ; rdf:subject ?pfs161 ; rdf:predicate up:annotation ; rdf:object ?annotation162 . _:592951 a rdf:Statement ; up:source unirule:MF_01631 ; rdf:subject ?pfs168 ; rdf:predicate up:annotation ; rdf:object ?annotation169 . _:592952 a rdf:Statement ; up:attribution _:592872 ; rdf:subject ?pfs168 ; rdf:predicate up:annotation ; rdf:object ?annotation169 . _:592953 a rdf:Statement ; up:source unirule:MF_01631 ; rdf:subject ?pfs175 ; rdf:predicate up:annotation ; rdf:object ?annotation176 . _:592954 a rdf:Statement ; up:attribution _:592873 ; rdf:subject ?pfs175 ; rdf:predicate up:annotation ; rdf:object ?annotation176 . } WHERE { #baseURI: http://purl.uniprot.org/unirule/MF_01631 #Rule MF_01631 Created by:? on:2006-04-04 Modified by:Edouard de Castro on:2024-09-03 ?this up:organism ?thisOrganism ; rdfs:seeAlso signature:MF_01631 . ?thisOrganism rdfs:subClassOf+ taxon:2 . BIND(URI(CONCAT(STR(?this), '#MF_01631a0')) AS ?name0) . BIND(URI(CONCAT(STR(?this), '#MF_01631a1')) AS ?namedpart1) . BIND(URI(CONCAT(STR(?this), '#MF_01631a2')) AS ?namedpart2) . BIND(URI(CONCAT(STR(?this), '#MF_01631a4')) AS ?annotation4) . BIND(URI(CONCAT(STR(?this), '#MF_01631a5')) AS ?annotation5) . BIND(URI(CONCAT(STR(?this), '#MF_01631a7')) AS ?annotation7) . BIND(URI(CONCAT(STR(?this), '#MF_01631a9')) AS ?annotation9) . BIND(URI(CONCAT(STR(?this), '#MF_01631a10')) AS ?annotation10) . BIND(URI(CONCAT(STR(?this), '#MF_01631a11')) AS ?annotation11) . BIND(URI(CONCAT(STR(?this), '#MF_01631a12')) AS ?annotation12) . BIND(URI(CONCAT(STR(?this), '#MF_01631a13')) AS ?annotation13) . BIND(URI(CONCAT(STR(?this), '#MF_01631a14')) AS ?annotation14) . BIND(URI(CONCAT(STR(?this), '#MF_01631a16')) AS ?annotation16) . BIND(URI(CONCAT(STR(?this), '#MF_01631a17')) AS ?annotation17) . OPTIONAL { ?this up:sequence ?thisSequence . ?thisSequence rdf:value ?thisSequenceValue . ?templateMotifMatch186 faldo:location ?templateMotifSequenceMatchRegionP0ACC7187 ; edam:is_output_of ?templateMotifSequenceProfileAlignmentOperationP0ACC7189 ; rdf:type edam:data_0869 ; rdf:value ?templateMotifCigarP0ACC7MF_01631182 . ?templateMotifSequenceMatchRegionP0ACC7187 faldo:begin ?templateMotifSequenceMatchBeginP0ACC7188 . ?templateMotifSequenceMatchBeginP0ACC7188 faldo:position ?templateMotifSequenceMatchBeginPositionP0ACC7183 ; faldo:reference isoform:P0ACC7-1 . ?templateMotifSequenceProfileAlignmentOperationP0ACC7189 edam:has_input signature:MF_01631 ; rdf:type edam:operation_0300 . ?targetMotifMatch190 faldo:location ?targetMotifMatchRegionMatch191 ; edam:is_output_of ?targetMotifSequenceAlignmentOperationMF_01631193 ; rdf:type edam:data_0869 ; rdf:value ?targetMotifMatchCigarP0ACC7MF_01631184 . ?targetMotifMatchRegionMatch191 faldo:begin ?targetMotifMatchRegionMatchBeginMF_01631192 . ?targetMotifMatchRegionMatchBeginMF_01631192 faldo:position ?targetMotifMatchRegionMatchBeginPositionMF_01631185 ; faldo:reference ?thisSequence . ?targetMotifSequenceAlignmentOperationMF_01631193 edam:has_input signature:MF_01631 ; rdf:type edam:operation_0300 . BIND(1 AS ?thisPositionOn22) . BIND(STRLEN(REPLACE(SUBSTR(?templateMotifCigarP0ACC7MF_01631182, 1, (STRLEN(?templateMotifCigarP0ACC7MF_01631182) - STRLEN(REPLACE(?templateMotifCigarP0ACC7MF_01631182, CONCAT('^(?:-*[^-]){', STR(((229 - ?templateMotifSequenceMatchBeginPositionP0ACC7183) + 1)), '}'), '')))), '[a-z]', '')) AS ?step1194) . BIND((STRLEN(SUBSTR(?targetMotifMatchCigarP0ACC7MF_01631184, 1, (STRLEN(?targetMotifMatchCigarP0ACC7MF_01631184) - STRLEN(REPLACE(?targetMotifMatchCigarP0ACC7MF_01631184, CONCAT('^(?:[a-z]*(?:[A-Z]|-)){', STR(?step1194), '}'), ''))))) - STRLEN(REPLACE(SUBSTR(?targetMotifMatchCigarP0ACC7MF_01631184, 1, (STRLEN(?targetMotifMatchCigarP0ACC7MF_01631184) - STRLEN(REPLACE(?targetMotifMatchCigarP0ACC7MF_01631184, CONCAT('^(?:[a-z]*(?:[A-Z]|-)){', STR(?step1194), '}'), '')))), '[^-]', ''))) AS ?step2195) . BIND(((?step2195 + ?targetMotifMatchRegionMatchBeginPositionMF_01631185) - 1) AS ?thisPositionOn23) . BIND(?this AS ?pfs1t196) . BIND(URI(CONCAT(STR(?thisSequence), '#position', STR(?thisPositionOn22))) AS ?pfsb20) . BIND(URI(CONCAT(STR(?thisSequence), '#position', STR(?thisPositionOn23))) AS ?pfse21) . FILTER ((BOUND(?thisPositionOn22) && BOUND(?thisPositionOn23))) . BIND(URI(CONCAT(STR(?this), '#MF_01631a19')) AS ?annotation19) . BIND(?this AS ?pfs18) . } OPTIONAL { ?this up:sequence ?thisSequence . ?thisSequence rdf:value ?thisSequenceValue . ?templateMotifMatch201 faldo:location ?templateMotifSequenceMatchRegionP0ACC7202 ; edam:is_output_of ?templateMotifSequenceProfileAlignmentOperationP0ACC7204 ; rdf:type edam:data_0869 ; rdf:value ?templateMotifCigarP0ACC7MF_01631197 . ?templateMotifSequenceMatchRegionP0ACC7202 faldo:begin ?templateMotifSequenceMatchBeginP0ACC7203 . ?templateMotifSequenceMatchBeginP0ACC7203 faldo:position ?templateMotifSequenceMatchBeginPositionP0ACC7198 ; faldo:reference isoform:P0ACC7-1 . ?templateMotifSequenceProfileAlignmentOperationP0ACC7204 edam:has_input signature:MF_01631 ; rdf:type edam:operation_0300 . ?targetMotifMatch205 faldo:location ?targetMotifMatchRegionMatch206 ; edam:is_output_of ?targetMotifSequenceAlignmentOperationMF_01631208 ; rdf:type edam:data_0869 ; rdf:value ?targetMotifMatchCigarP0ACC7MF_01631199 . ?targetMotifMatchRegionMatch206 faldo:begin ?targetMotifMatchRegionMatchBeginMF_01631207 . ?targetMotifMatchRegionMatchBeginMF_01631207 faldo:position ?targetMotifMatchRegionMatchBeginPositionMF_01631200 ; faldo:reference ?thisSequence . ?targetMotifSequenceAlignmentOperationMF_01631208 edam:has_input signature:MF_01631 ; rdf:type edam:operation_0300 . BIND(STRLEN(REPLACE(SUBSTR(?templateMotifCigarP0ACC7MF_01631197, 1, (STRLEN(?templateMotifCigarP0ACC7MF_01631197) - STRLEN(REPLACE(?templateMotifCigarP0ACC7MF_01631197, CONCAT('^(?:-*[^-]){', STR(((230 - ?templateMotifSequenceMatchBeginPositionP0ACC7198) + 1)), '}'), '')))), '[a-z]', '')) AS ?step1209) . BIND((STRLEN(SUBSTR(?targetMotifMatchCigarP0ACC7MF_01631199, 1, (STRLEN(?targetMotifMatchCigarP0ACC7MF_01631199) - STRLEN(REPLACE(?targetMotifMatchCigarP0ACC7MF_01631199, CONCAT('^(?:[a-z]*(?:[A-Z]|-)){', STR(?step1209), '}'), ''))))) - STRLEN(REPLACE(SUBSTR(?targetMotifMatchCigarP0ACC7MF_01631199, 1, (STRLEN(?targetMotifMatchCigarP0ACC7MF_01631199) - STRLEN(REPLACE(?targetMotifMatchCigarP0ACC7MF_01631199, CONCAT('^(?:[a-z]*(?:[A-Z]|-)){', STR(?step1209), '}'), '')))), '[^-]', ''))) AS ?step2210) . BIND(((?step2210 + ?targetMotifMatchRegionMatchBeginPositionMF_01631200) - 1) AS ?thisPositionOn28) . BIND(STRLEN(REPLACE(SUBSTR(?templateMotifCigarP0ACC7MF_01631197, 1, (STRLEN(?templateMotifCigarP0ACC7MF_01631197) - STRLEN(REPLACE(?templateMotifCigarP0ACC7MF_01631197, CONCAT('^(?:-*[^-]){', STR(((250 - ?templateMotifSequenceMatchBeginPositionP0ACC7198) + 1)), '}'), '')))), '[a-z]', '')) AS ?step1211) . BIND((STRLEN(SUBSTR(?targetMotifMatchCigarP0ACC7MF_01631199, 1, (STRLEN(?targetMotifMatchCigarP0ACC7MF_01631199) - STRLEN(REPLACE(?targetMotifMatchCigarP0ACC7MF_01631199, CONCAT('^(?:[a-z]*(?:[A-Z]|-)){', STR(?step1211), '}'), ''))))) - STRLEN(REPLACE(SUBSTR(?targetMotifMatchCigarP0ACC7MF_01631199, 1, (STRLEN(?targetMotifMatchCigarP0ACC7MF_01631199) - STRLEN(REPLACE(?targetMotifMatchCigarP0ACC7MF_01631199, CONCAT('^(?:[a-z]*(?:[A-Z]|-)){', STR(?step1211), '}'), '')))), '[^-]', ''))) AS ?step2212) . BIND(((?step2212 + ?targetMotifMatchRegionMatchBeginPositionMF_01631200) - 1) AS ?thisPositionOn29) . BIND(?this AS ?pfs1t213) . BIND(URI(CONCAT(STR(?thisSequence), '#position', STR(?thisPositionOn28))) AS ?pfsb26) . BIND(URI(CONCAT(STR(?thisSequence), '#position', STR(?thisPositionOn29))) AS ?pfse27) . FILTER ((BOUND(?thisPositionOn28) && BOUND(?thisPositionOn29))) . BIND(URI(CONCAT(STR(?this), '#MF_01631a25')) AS ?annotation25) . BIND(?this AS ?pfs24) . } OPTIONAL { ?this up:sequence ?thisSequence . ?thisSequence rdf:value ?thisSequenceValue . ?templateMotifMatch218 faldo:location ?templateMotifSequenceMatchRegionP0ACC7219 ; edam:is_output_of ?templateMotifSequenceProfileAlignmentOperationP0ACC7221 ; rdf:type edam:data_0869 ; rdf:value ?templateMotifCigarP0ACC7MF_01631214 . ?templateMotifSequenceMatchRegionP0ACC7219 faldo:begin ?templateMotifSequenceMatchBeginP0ACC7220 . ?templateMotifSequenceMatchBeginP0ACC7220 faldo:position ?templateMotifSequenceMatchBeginPositionP0ACC7215 ; faldo:reference isoform:P0ACC7-1 . ?templateMotifSequenceProfileAlignmentOperationP0ACC7221 edam:has_input signature:MF_01631 ; rdf:type edam:operation_0300 . ?targetMotifMatch222 faldo:location ?targetMotifMatchRegionMatch223 ; edam:is_output_of ?targetMotifSequenceAlignmentOperationMF_01631225 ; rdf:type edam:data_0869 ; rdf:value ?targetMotifMatchCigarP0ACC7MF_01631216 . ?targetMotifMatchRegionMatch223 faldo:begin ?targetMotifMatchRegionMatchBeginMF_01631224 . ?targetMotifMatchRegionMatchBeginMF_01631224 faldo:position ?targetMotifMatchRegionMatchBeginPositionMF_01631217 ; faldo:reference ?thisSequence . ?targetMotifSequenceAlignmentOperationMF_01631225 edam:has_input signature:MF_01631 ; rdf:type edam:operation_0300 . BIND(STRLEN(REPLACE(SUBSTR(?templateMotifCigarP0ACC7MF_01631214, 1, (STRLEN(?templateMotifCigarP0ACC7MF_01631214) - STRLEN(REPLACE(?templateMotifCigarP0ACC7MF_01631214, CONCAT('^(?:-*[^-]){', STR(((251 - ?templateMotifSequenceMatchBeginPositionP0ACC7215) + 1)), '}'), '')))), '[a-z]', '')) AS ?step1226) . BIND((STRLEN(SUBSTR(?targetMotifMatchCigarP0ACC7MF_01631216, 1, (STRLEN(?targetMotifMatchCigarP0ACC7MF_01631216) - STRLEN(REPLACE(?targetMotifMatchCigarP0ACC7MF_01631216, CONCAT('^(?:[a-z]*(?:[A-Z]|-)){', STR(?step1226), '}'), ''))))) - STRLEN(REPLACE(SUBSTR(?targetMotifMatchCigarP0ACC7MF_01631216, 1, (STRLEN(?targetMotifMatchCigarP0ACC7MF_01631216) - STRLEN(REPLACE(?targetMotifMatchCigarP0ACC7MF_01631216, CONCAT('^(?:[a-z]*(?:[A-Z]|-)){', STR(?step1226), '}'), '')))), '[^-]', ''))) AS ?step2227) . BIND(((?step2227 + ?targetMotifMatchRegionMatchBeginPositionMF_01631217) - 1) AS ?thisPositionOn34) . BIND(STRLEN(?thisSequenceValue) AS ?thisPositionOn35) . BIND(?this AS ?pfs1t228) . BIND(URI(CONCAT(STR(?thisSequence), '#position', STR(?thisPositionOn34))) AS ?pfsb32) . BIND(URI(CONCAT(STR(?thisSequence), '#position', STR(?thisPositionOn35))) AS ?pfse33) . FILTER ((BOUND(?thisPositionOn34) && BOUND(?thisPositionOn35))) . BIND(URI(CONCAT(STR(?this), '#MF_01631a31')) AS ?annotation31) . BIND(?this AS ?pfs30) . } OPTIONAL { ?this up:sequence ?thisSequence . ?thisSequence rdf:value ?thisSequenceValue . ?templateMotifMatch233 faldo:location ?templateMotifSequenceMatchRegionP0ACC7234 ; edam:is_output_of ?templateMotifSequenceProfileAlignmentOperationP0ACC7236 ; rdf:type edam:data_0869 ; rdf:value ?templateMotifCigarP0ACC7MF_01631229 . ?templateMotifSequenceMatchRegionP0ACC7234 faldo:begin ?templateMotifSequenceMatchBeginP0ACC7235 . ?templateMotifSequenceMatchBeginP0ACC7235 faldo:position ?templateMotifSequenceMatchBeginPositionP0ACC7230 ; faldo:reference isoform:P0ACC7-1 . ?templateMotifSequenceProfileAlignmentOperationP0ACC7236 edam:has_input signature:MF_01631 ; rdf:type edam:operation_0300 . ?targetMotifMatch237 faldo:location ?targetMotifMatchRegionMatch238 ; edam:is_output_of ?targetMotifSequenceAlignmentOperationMF_01631240 ; rdf:type edam:data_0869 ; rdf:value ?targetMotifMatchCigarP0ACC7MF_01631231 . ?targetMotifMatchRegionMatch238 faldo:begin ?targetMotifMatchRegionMatchBeginMF_01631239 . ?targetMotifMatchRegionMatchBeginMF_01631239 faldo:position ?targetMotifMatchRegionMatchBeginPositionMF_01631232 ; faldo:reference ?thisSequence . ?targetMotifSequenceAlignmentOperationMF_01631240 edam:has_input signature:MF_01631 ; rdf:type edam:operation_0300 . BIND(STRLEN(REPLACE(SUBSTR(?templateMotifCigarP0ACC7MF_01631229, 1, (STRLEN(?templateMotifCigarP0ACC7MF_01631229) - STRLEN(REPLACE(?templateMotifCigarP0ACC7MF_01631229, CONCAT('^(?:-*[^-]){', STR(((11 - ?templateMotifSequenceMatchBeginPositionP0ACC7230) + 1)), '}'), '')))), '[a-z]', '')) AS ?step1241) . BIND((STRLEN(SUBSTR(?targetMotifMatchCigarP0ACC7MF_01631231, 1, (STRLEN(?targetMotifMatchCigarP0ACC7MF_01631231) - STRLEN(REPLACE(?targetMotifMatchCigarP0ACC7MF_01631231, CONCAT('^(?:[a-z]*(?:[A-Z]|-)){', STR(?step1241), '}'), ''))))) - STRLEN(REPLACE(SUBSTR(?targetMotifMatchCigarP0ACC7MF_01631231, 1, (STRLEN(?targetMotifMatchCigarP0ACC7MF_01631231) - STRLEN(REPLACE(?targetMotifMatchCigarP0ACC7MF_01631231, CONCAT('^(?:[a-z]*(?:[A-Z]|-)){', STR(?step1241), '}'), '')))), '[^-]', ''))) AS ?step2242) . BIND(((?step2242 + ?targetMotifMatchRegionMatchBeginPositionMF_01631232) - 1) AS ?thisPositionOn41) . BIND(STRLEN(REPLACE(SUBSTR(?templateMotifCigarP0ACC7MF_01631229, 1, (STRLEN(?templateMotifCigarP0ACC7MF_01631229) - STRLEN(REPLACE(?templateMotifCigarP0ACC7MF_01631229, CONCAT('^(?:-*[^-]){', STR(((14 - ?templateMotifSequenceMatchBeginPositionP0ACC7230) + 1)), '}'), '')))), '[a-z]', '')) AS ?step1243) . BIND((STRLEN(SUBSTR(?targetMotifMatchCigarP0ACC7MF_01631231, 1, (STRLEN(?targetMotifMatchCigarP0ACC7MF_01631231) - STRLEN(REPLACE(?targetMotifMatchCigarP0ACC7MF_01631231, CONCAT('^(?:[a-z]*(?:[A-Z]|-)){', STR(?step1243), '}'), ''))))) - STRLEN(REPLACE(SUBSTR(?targetMotifMatchCigarP0ACC7MF_01631231, 1, (STRLEN(?targetMotifMatchCigarP0ACC7MF_01631231) - STRLEN(REPLACE(?targetMotifMatchCigarP0ACC7MF_01631231, CONCAT('^(?:[a-z]*(?:[A-Z]|-)){', STR(?step1243), '}'), '')))), '[^-]', ''))) AS ?step2244) . BIND(((?step2244 + ?targetMotifMatchRegionMatchBeginPositionMF_01631232) - 1) AS ?thisPositionOn42) . BIND(?this AS ?pfs1t245) . BIND(URI(CONCAT(STR(?thisSequence), '#position', STR(?thisPositionOn41))) AS ?pfsb38) . BIND(URI(CONCAT(STR(?thisSequence), '#position', STR(?thisPositionOn42))) AS ?pfse39) . FILTER ((SUBSTR(?thisSequenceValue, ?thisPositionOn41, (?thisPositionOn42 - ?thisPositionOn41)) = 'LAAG')) . BIND(URI(CONCAT(STR(?this), '#MF_01631a37')) AS ?annotation37) . BIND(?this AS ?pfs36) . } OPTIONAL { ?this up:sequence ?thisSequence . ?thisSequence rdf:value ?thisSequenceValue . ?templateMotifMatch250 faldo:location ?templateMotifSequenceMatchRegionP0ACC7251 ; edam:is_output_of ?templateMotifSequenceProfileAlignmentOperationP0ACC7253 ; rdf:type edam:data_0869 ; rdf:value ?templateMotifCigarP0ACC7MF_01631246 . ?templateMotifSequenceMatchRegionP0ACC7251 faldo:begin ?templateMotifSequenceMatchBeginP0ACC7252 . ?templateMotifSequenceMatchBeginP0ACC7252 faldo:position ?templateMotifSequenceMatchBeginPositionP0ACC7247 ; faldo:reference isoform:P0ACC7-1 . ?templateMotifSequenceProfileAlignmentOperationP0ACC7253 edam:has_input signature:MF_01631 ; rdf:type edam:operation_0300 . ?targetMotifMatch254 faldo:location ?targetMotifMatchRegionMatch255 ; edam:is_output_of ?targetMotifSequenceAlignmentOperationMF_01631257 ; rdf:type edam:data_0869 ; rdf:value ?targetMotifMatchCigarP0ACC7MF_01631248 . ?targetMotifMatchRegionMatch255 faldo:begin ?targetMotifMatchRegionMatchBeginMF_01631256 . ?targetMotifMatchRegionMatchBeginMF_01631256 faldo:position ?targetMotifMatchRegionMatchBeginPositionMF_01631249 ; faldo:reference ?thisSequence . ?targetMotifSequenceAlignmentOperationMF_01631257 edam:has_input signature:MF_01631 ; rdf:type edam:operation_0300 . BIND(STRLEN(REPLACE(SUBSTR(?templateMotifCigarP0ACC7MF_01631246, 1, (STRLEN(?templateMotifCigarP0ACC7MF_01631246) - STRLEN(REPLACE(?templateMotifCigarP0ACC7MF_01631246, CONCAT('^(?:-*[^-]){', STR(((81 - ?templateMotifSequenceMatchBeginPositionP0ACC7247) + 1)), '}'), '')))), '[a-z]', '')) AS ?step1258) . BIND((STRLEN(SUBSTR(?targetMotifMatchCigarP0ACC7MF_01631248, 1, (STRLEN(?targetMotifMatchCigarP0ACC7MF_01631248) - STRLEN(REPLACE(?targetMotifMatchCigarP0ACC7MF_01631248, CONCAT('^(?:[a-z]*(?:[A-Z]|-)){', STR(?step1258), '}'), ''))))) - STRLEN(REPLACE(SUBSTR(?targetMotifMatchCigarP0ACC7MF_01631248, 1, (STRLEN(?targetMotifMatchCigarP0ACC7MF_01631248) - STRLEN(REPLACE(?targetMotifMatchCigarP0ACC7MF_01631248, CONCAT('^(?:[a-z]*(?:[A-Z]|-)){', STR(?step1258), '}'), '')))), '[^-]', ''))) AS ?step2259) . BIND(((?step2259 + ?targetMotifMatchRegionMatchBeginPositionMF_01631249) - 1) AS ?thisPositionOn48) . BIND(STRLEN(REPLACE(SUBSTR(?templateMotifCigarP0ACC7MF_01631246, 1, (STRLEN(?templateMotifCigarP0ACC7MF_01631246) - STRLEN(REPLACE(?templateMotifCigarP0ACC7MF_01631246, CONCAT('^(?:-*[^-]){', STR(((82 - ?templateMotifSequenceMatchBeginPositionP0ACC7247) + 1)), '}'), '')))), '[a-z]', '')) AS ?step1260) . BIND((STRLEN(SUBSTR(?targetMotifMatchCigarP0ACC7MF_01631248, 1, (STRLEN(?targetMotifMatchCigarP0ACC7MF_01631248) - STRLEN(REPLACE(?targetMotifMatchCigarP0ACC7MF_01631248, CONCAT('^(?:[a-z]*(?:[A-Z]|-)){', STR(?step1260), '}'), ''))))) - STRLEN(REPLACE(SUBSTR(?targetMotifMatchCigarP0ACC7MF_01631248, 1, (STRLEN(?targetMotifMatchCigarP0ACC7MF_01631248) - STRLEN(REPLACE(?targetMotifMatchCigarP0ACC7MF_01631248, CONCAT('^(?:[a-z]*(?:[A-Z]|-)){', STR(?step1260), '}'), '')))), '[^-]', ''))) AS ?step2261) . BIND(((?step2261 + ?targetMotifMatchRegionMatchBeginPositionMF_01631249) - 1) AS ?thisPositionOn49) . BIND(?this AS ?pfs1t262) . BIND(URI(CONCAT(STR(?thisSequence), '#position', STR(?thisPositionOn48))) AS ?pfsb45) . BIND(URI(CONCAT(STR(?thisSequence), '#position', STR(?thisPositionOn49))) AS ?pfse46) . FILTER ((SUBSTR(?thisSequenceValue, ?thisPositionOn48, (?thisPositionOn49 - ?thisPositionOn48)) = 'GT')) . BIND(URI(CONCAT(STR(?this), '#MF_01631a44')) AS ?annotation44) . BIND(?this AS ?pfs43) . } OPTIONAL { ?this up:sequence ?thisSequence . ?thisSequence rdf:value ?thisSequenceValue . ?templateMotifMatch267 faldo:location ?templateMotifSequenceMatchRegionP0ACC7268 ; edam:is_output_of ?templateMotifSequenceProfileAlignmentOperationP0ACC7270 ; rdf:type edam:data_0869 ; rdf:value ?templateMotifCigarP0ACC7MF_01631263 . ?templateMotifSequenceMatchRegionP0ACC7268 faldo:begin ?templateMotifSequenceMatchBeginP0ACC7269 . ?templateMotifSequenceMatchBeginP0ACC7269 faldo:position ?templateMotifSequenceMatchBeginPositionP0ACC7264 ; faldo:reference isoform:P0ACC7-1 . ?templateMotifSequenceProfileAlignmentOperationP0ACC7270 edam:has_input signature:MF_01631 ; rdf:type edam:operation_0300 . ?targetMotifMatch271 faldo:location ?targetMotifMatchRegionMatch272 ; edam:is_output_of ?targetMotifSequenceAlignmentOperationMF_01631274 ; rdf:type edam:data_0869 ; rdf:value ?targetMotifMatchCigarP0ACC7MF_01631265 . ?targetMotifMatchRegionMatch272 faldo:begin ?targetMotifMatchRegionMatchBeginMF_01631273 . ?targetMotifMatchRegionMatchBeginMF_01631273 faldo:position ?targetMotifMatchRegionMatchBeginPositionMF_01631266 ; faldo:reference ?thisSequence . ?targetMotifSequenceAlignmentOperationMF_01631274 edam:has_input signature:MF_01631 ; rdf:type edam:operation_0300 . BIND(STRLEN(REPLACE(SUBSTR(?templateMotifCigarP0ACC7MF_01631263, 1, (STRLEN(?templateMotifCigarP0ACC7MF_01631263) - STRLEN(REPLACE(?templateMotifCigarP0ACC7MF_01631263, CONCAT('^(?:-*[^-]){', STR(((103 - ?templateMotifSequenceMatchBeginPositionP0ACC7264) + 1)), '}'), '')))), '[a-z]', '')) AS ?step1275) . BIND((STRLEN(SUBSTR(?targetMotifMatchCigarP0ACC7MF_01631265, 1, (STRLEN(?targetMotifMatchCigarP0ACC7MF_01631265) - STRLEN(REPLACE(?targetMotifMatchCigarP0ACC7MF_01631265, CONCAT('^(?:[a-z]*(?:[A-Z]|-)){', STR(?step1275), '}'), ''))))) - STRLEN(REPLACE(SUBSTR(?targetMotifMatchCigarP0ACC7MF_01631265, 1, (STRLEN(?targetMotifMatchCigarP0ACC7MF_01631265) - STRLEN(REPLACE(?targetMotifMatchCigarP0ACC7MF_01631265, CONCAT('^(?:[a-z]*(?:[A-Z]|-)){', STR(?step1275), '}'), '')))), '[^-]', ''))) AS ?step2276) . BIND(((?step2276 + ?targetMotifMatchRegionMatchBeginPositionMF_01631266) - 1) AS ?thisPositionOn55) . BIND(STRLEN(REPLACE(SUBSTR(?templateMotifCigarP0ACC7MF_01631263, 1, (STRLEN(?templateMotifCigarP0ACC7MF_01631263) - STRLEN(REPLACE(?templateMotifCigarP0ACC7MF_01631263, CONCAT('^(?:-*[^-]){', STR(((105 - ?templateMotifSequenceMatchBeginPositionP0ACC7264) + 1)), '}'), '')))), '[a-z]', '')) AS ?step1277) . BIND((STRLEN(SUBSTR(?targetMotifMatchCigarP0ACC7MF_01631265, 1, (STRLEN(?targetMotifMatchCigarP0ACC7MF_01631265) - STRLEN(REPLACE(?targetMotifMatchCigarP0ACC7MF_01631265, CONCAT('^(?:[a-z]*(?:[A-Z]|-)){', STR(?step1277), '}'), ''))))) - STRLEN(REPLACE(SUBSTR(?targetMotifMatchCigarP0ACC7MF_01631265, 1, (STRLEN(?targetMotifMatchCigarP0ACC7MF_01631265) - STRLEN(REPLACE(?targetMotifMatchCigarP0ACC7MF_01631265, CONCAT('^(?:[a-z]*(?:[A-Z]|-)){', STR(?step1277), '}'), '')))), '[^-]', ''))) AS ?step2278) . BIND(((?step2278 + ?targetMotifMatchRegionMatchBeginPositionMF_01631266) - 1) AS ?thisPositionOn56) . BIND(?this AS ?pfs1t279) . BIND(URI(CONCAT(STR(?thisSequence), '#position', STR(?thisPositionOn55))) AS ?pfsb52) . BIND(URI(CONCAT(STR(?thisSequence), '#position', STR(?thisPositionOn56))) AS ?pfse53) . FILTER (REGEX('[SY]GD', SUBSTR(?thisSequenceValue, ?thisPositionOn55, (?thisPositionOn56 - ?thisPositionOn55)))) . BIND(URI(CONCAT(STR(?this), '#MF_01631a51')) AS ?annotation51) . BIND(?this AS ?pfs50) . } OPTIONAL { ?this up:sequence ?thisSequence . ?thisSequence rdf:value ?thisSequenceValue . ?templateMotifMatch284 faldo:location ?templateMotifSequenceMatchRegionP0ACC7285 ; edam:is_output_of ?templateMotifSequenceProfileAlignmentOperationP0ACC7287 ; rdf:type edam:data_0869 ; rdf:value ?templateMotifCigarP0ACC7MF_01631280 . ?templateMotifSequenceMatchRegionP0ACC7285 faldo:begin ?templateMotifSequenceMatchBeginP0ACC7286 . ?templateMotifSequenceMatchBeginP0ACC7286 faldo:position ?templateMotifSequenceMatchBeginPositionP0ACC7281 ; faldo:reference isoform:P0ACC7-1 . ?templateMotifSequenceProfileAlignmentOperationP0ACC7287 edam:has_input signature:MF_01631 ; rdf:type edam:operation_0300 . ?targetMotifMatch288 faldo:location ?targetMotifMatchRegionMatch289 ; edam:is_output_of ?targetMotifSequenceAlignmentOperationMF_01631291 ; rdf:type edam:data_0869 ; rdf:value ?targetMotifMatchCigarP0ACC7MF_01631282 . ?targetMotifMatchRegionMatch289 faldo:begin ?targetMotifMatchRegionMatchBeginMF_01631290 . ?targetMotifMatchRegionMatchBeginMF_01631290 faldo:position ?targetMotifMatchRegionMatchBeginPositionMF_01631283 ; faldo:reference ?thisSequence . ?targetMotifSequenceAlignmentOperationMF_01631291 edam:has_input signature:MF_01631 ; rdf:type edam:operation_0300 . BIND(STRLEN(REPLACE(SUBSTR(?templateMotifCigarP0ACC7MF_01631280, 1, (STRLEN(?templateMotifCigarP0ACC7MF_01631280) - STRLEN(REPLACE(?templateMotifCigarP0ACC7MF_01631280, CONCAT('^(?:-*[^-]){', STR(((386 - ?templateMotifSequenceMatchBeginPositionP0ACC7281) + 1)), '}'), '')))), '[a-z]', '')) AS ?step1292) . BIND((STRLEN(SUBSTR(?targetMotifMatchCigarP0ACC7MF_01631282, 1, (STRLEN(?targetMotifMatchCigarP0ACC7MF_01631282) - STRLEN(REPLACE(?targetMotifMatchCigarP0ACC7MF_01631282, CONCAT('^(?:[a-z]*(?:[A-Z]|-)){', STR(?step1292), '}'), ''))))) - STRLEN(REPLACE(SUBSTR(?targetMotifMatchCigarP0ACC7MF_01631282, 1, (STRLEN(?targetMotifMatchCigarP0ACC7MF_01631282) - STRLEN(REPLACE(?targetMotifMatchCigarP0ACC7MF_01631282, CONCAT('^(?:[a-z]*(?:[A-Z]|-)){', STR(?step1292), '}'), '')))), '[^-]', ''))) AS ?step2293) . BIND(((?step2293 + ?targetMotifMatchRegionMatchBeginPositionMF_01631283) - 1) AS ?thisPositionOn62) . BIND(STRLEN(REPLACE(SUBSTR(?templateMotifCigarP0ACC7MF_01631280, 1, (STRLEN(?templateMotifCigarP0ACC7MF_01631280) - STRLEN(REPLACE(?templateMotifCigarP0ACC7MF_01631280, CONCAT('^(?:-*[^-]){', STR(((387 - ?templateMotifSequenceMatchBeginPositionP0ACC7281) + 1)), '}'), '')))), '[a-z]', '')) AS ?step1294) . BIND((STRLEN(SUBSTR(?targetMotifMatchCigarP0ACC7MF_01631282, 1, (STRLEN(?targetMotifMatchCigarP0ACC7MF_01631282) - STRLEN(REPLACE(?targetMotifMatchCigarP0ACC7MF_01631282, CONCAT('^(?:[a-z]*(?:[A-Z]|-)){', STR(?step1294), '}'), ''))))) - STRLEN(REPLACE(SUBSTR(?targetMotifMatchCigarP0ACC7MF_01631282, 1, (STRLEN(?targetMotifMatchCigarP0ACC7MF_01631282) - STRLEN(REPLACE(?targetMotifMatchCigarP0ACC7MF_01631282, CONCAT('^(?:[a-z]*(?:[A-Z]|-)){', STR(?step1294), '}'), '')))), '[^-]', ''))) AS ?step2295) . BIND(((?step2295 + ?targetMotifMatchRegionMatchBeginPositionMF_01631283) - 1) AS ?thisPositionOn63) . BIND(?this AS ?pfs1t296) . BIND(URI(CONCAT(STR(?thisSequence), '#position', STR(?thisPositionOn62))) AS ?pfsb59) . BIND(URI(CONCAT(STR(?thisSequence), '#position', STR(?thisPositionOn63))) AS ?pfse60) . FILTER ((SUBSTR(?thisSequenceValue, ?thisPositionOn62, (?thisPositionOn63 - ?thisPositionOn62)) = 'NY')) . BIND(URI(CONCAT(STR(?this), '#MF_01631a58')) AS ?annotation58) . BIND(?this AS ?pfs57) . } OPTIONAL { ?this up:sequence ?thisSequence . ?thisSequence rdf:value ?thisSequenceValue . ?templateMotifMatch301 faldo:location ?templateMotifSequenceMatchRegionP0ACC7302 ; edam:is_output_of ?templateMotifSequenceProfileAlignmentOperationP0ACC7304 ; rdf:type edam:data_0869 ; rdf:value ?templateMotifCigarP0ACC7MF_01631297 . ?templateMotifSequenceMatchRegionP0ACC7302 faldo:begin ?templateMotifSequenceMatchBeginP0ACC7303 . ?templateMotifSequenceMatchBeginP0ACC7303 faldo:position ?templateMotifSequenceMatchBeginPositionP0ACC7298 ; faldo:reference isoform:P0ACC7-1 . ?templateMotifSequenceProfileAlignmentOperationP0ACC7304 edam:has_input signature:MF_01631 ; rdf:type edam:operation_0300 . ?targetMotifMatch305 faldo:location ?targetMotifMatchRegionMatch306 ; edam:is_output_of ?targetMotifSequenceAlignmentOperationMF_01631308 ; rdf:type edam:data_0869 ; rdf:value ?targetMotifMatchCigarP0ACC7MF_01631299 . ?targetMotifMatchRegionMatch306 faldo:begin ?targetMotifMatchRegionMatchBeginMF_01631307 . ?targetMotifMatchRegionMatchBeginMF_01631307 faldo:position ?targetMotifMatchRegionMatchBeginPositionMF_01631300 ; faldo:reference ?thisSequence . ?targetMotifSequenceAlignmentOperationMF_01631308 edam:has_input signature:MF_01631 ; rdf:type edam:operation_0300 . BIND(STRLEN(REPLACE(SUBSTR(?templateMotifCigarP0ACC7MF_01631297, 1, (STRLEN(?templateMotifCigarP0ACC7MF_01631297) - STRLEN(REPLACE(?templateMotifCigarP0ACC7MF_01631297, CONCAT('^(?:-*[^-]){', STR(((363 - ?templateMotifSequenceMatchBeginPositionP0ACC7298) + 1)), '}'), '')))), '[a-z]', '')) AS ?step1309) . BIND((STRLEN(SUBSTR(?targetMotifMatchCigarP0ACC7MF_01631299, 1, (STRLEN(?targetMotifMatchCigarP0ACC7MF_01631299) - STRLEN(REPLACE(?targetMotifMatchCigarP0ACC7MF_01631299, CONCAT('^(?:[a-z]*(?:[A-Z]|-)){', STR(?step1309), '}'), ''))))) - STRLEN(REPLACE(SUBSTR(?targetMotifMatchCigarP0ACC7MF_01631299, 1, (STRLEN(?targetMotifMatchCigarP0ACC7MF_01631299) - STRLEN(REPLACE(?targetMotifMatchCigarP0ACC7MF_01631299, CONCAT('^(?:[a-z]*(?:[A-Z]|-)){', STR(?step1309), '}'), '')))), '[^-]', ''))) AS ?step2310) . BIND(((?step2310 + ?targetMotifMatchRegionMatchBeginPositionMF_01631300) - 1) AS ?thisPositionOn68) . BIND(?thisPositionOn68 AS ?thisPositionOn69) . BIND(?this AS ?pfs1t311) . BIND(URI(CONCAT(STR(?thisSequence), '#position', STR(?thisPositionOn68))) AS ?pfsb66) . BIND(URI(CONCAT(STR(?thisSequence), '#position', STR(?thisPositionOn69))) AS ?pfse67) . FILTER ((SUBSTR(?thisSequenceValue, ?thisPositionOn68, 1) = 'H')) . BIND(URI(CONCAT(STR(?this), '#MF_01631a65')) AS ?annotation65) . BIND(?this AS ?pfs64) . } OPTIONAL { ?this up:sequence ?thisSequence . ?thisSequence rdf:value ?thisSequenceValue . ?templateMotifMatch316 faldo:location ?templateMotifSequenceMatchRegionP0ACC7317 ; edam:is_output_of ?templateMotifSequenceProfileAlignmentOperationP0ACC7319 ; rdf:type edam:data_0869 ; rdf:value ?templateMotifCigarP0ACC7MF_01631312 . ?templateMotifSequenceMatchRegionP0ACC7317 faldo:begin ?templateMotifSequenceMatchBeginP0ACC7318 . ?templateMotifSequenceMatchBeginP0ACC7318 faldo:position ?templateMotifSequenceMatchBeginPositionP0ACC7313 ; faldo:reference isoform:P0ACC7-1 . ?templateMotifSequenceProfileAlignmentOperationP0ACC7319 edam:has_input signature:MF_01631 ; rdf:type edam:operation_0300 . ?targetMotifMatch320 faldo:location ?targetMotifMatchRegionMatch321 ; edam:is_output_of ?targetMotifSequenceAlignmentOperationMF_01631323 ; rdf:type edam:data_0869 ; rdf:value ?targetMotifMatchCigarP0ACC7MF_01631314 . ?targetMotifMatchRegionMatch321 faldo:begin ?targetMotifMatchRegionMatchBeginMF_01631322 . ?targetMotifMatchRegionMatchBeginMF_01631322 faldo:position ?targetMotifMatchRegionMatchBeginPositionMF_01631315 ; faldo:reference ?thisSequence . ?targetMotifSequenceAlignmentOperationMF_01631323 edam:has_input signature:MF_01631 ; rdf:type edam:operation_0300 . BIND(STRLEN(REPLACE(SUBSTR(?templateMotifCigarP0ACC7MF_01631312, 1, (STRLEN(?templateMotifCigarP0ACC7MF_01631312) - STRLEN(REPLACE(?templateMotifCigarP0ACC7MF_01631312, CONCAT('^(?:-*[^-]){', STR(((105 - ?templateMotifSequenceMatchBeginPositionP0ACC7313) + 1)), '}'), '')))), '[a-z]', '')) AS ?step1324) . BIND((STRLEN(SUBSTR(?targetMotifMatchCigarP0ACC7MF_01631314, 1, (STRLEN(?targetMotifMatchCigarP0ACC7MF_01631314) - STRLEN(REPLACE(?targetMotifMatchCigarP0ACC7MF_01631314, CONCAT('^(?:[a-z]*(?:[A-Z]|-)){', STR(?step1324), '}'), ''))))) - STRLEN(REPLACE(SUBSTR(?targetMotifMatchCigarP0ACC7MF_01631314, 1, (STRLEN(?targetMotifMatchCigarP0ACC7MF_01631314) - STRLEN(REPLACE(?targetMotifMatchCigarP0ACC7MF_01631314, CONCAT('^(?:[a-z]*(?:[A-Z]|-)){', STR(?step1324), '}'), '')))), '[^-]', ''))) AS ?step2325) . BIND(((?step2325 + ?targetMotifMatchRegionMatchBeginPositionMF_01631315) - 1) AS ?thisPositionOn75) . BIND(?thisPositionOn75 AS ?thisPositionOn76) . BIND(?this AS ?pfs1t326) . BIND(URI(CONCAT(STR(?thisSequence), '#position', STR(?thisPositionOn75))) AS ?pfsb72) . BIND(URI(CONCAT(STR(?thisSequence), '#position', STR(?thisPositionOn76))) AS ?pfse73) . FILTER ((SUBSTR(?thisSequenceValue, ?thisPositionOn75, 1) = 'D')) . BIND(URI(CONCAT(STR(?this), '#MF_01631a71')) AS ?annotation71) . BIND(?this AS ?pfs70) . } OPTIONAL { ?this up:sequence ?thisSequence . ?thisSequence rdf:value ?thisSequenceValue . ?templateMotifMatch331 faldo:location ?templateMotifSequenceMatchRegionP0ACC7332 ; edam:is_output_of ?templateMotifSequenceProfileAlignmentOperationP0ACC7334 ; rdf:type edam:data_0869 ; rdf:value ?templateMotifCigarP0ACC7MF_01631327 . ?templateMotifSequenceMatchRegionP0ACC7332 faldo:begin ?templateMotifSequenceMatchBeginP0ACC7333 . ?templateMotifSequenceMatchBeginP0ACC7333 faldo:position ?templateMotifSequenceMatchBeginPositionP0ACC7328 ; faldo:reference isoform:P0ACC7-1 . ?templateMotifSequenceProfileAlignmentOperationP0ACC7334 edam:has_input signature:MF_01631 ; rdf:type edam:operation_0300 . ?targetMotifMatch335 faldo:location ?targetMotifMatchRegionMatch336 ; edam:is_output_of ?targetMotifSequenceAlignmentOperationMF_01631338 ; rdf:type edam:data_0869 ; rdf:value ?targetMotifMatchCigarP0ACC7MF_01631329 . ?targetMotifMatchRegionMatch336 faldo:begin ?targetMotifMatchRegionMatchBeginMF_01631337 . ?targetMotifMatchRegionMatchBeginMF_01631337 faldo:position ?targetMotifMatchRegionMatchBeginPositionMF_01631330 ; faldo:reference ?thisSequence . ?targetMotifSequenceAlignmentOperationMF_01631338 edam:has_input signature:MF_01631 ; rdf:type edam:operation_0300 . BIND(STRLEN(REPLACE(SUBSTR(?templateMotifCigarP0ACC7MF_01631327, 1, (STRLEN(?templateMotifCigarP0ACC7MF_01631327) - STRLEN(REPLACE(?templateMotifCigarP0ACC7MF_01631327, CONCAT('^(?:-*[^-]){', STR(((227 - ?templateMotifSequenceMatchBeginPositionP0ACC7328) + 1)), '}'), '')))), '[a-z]', '')) AS ?step1339) . BIND((STRLEN(SUBSTR(?targetMotifMatchCigarP0ACC7MF_01631329, 1, (STRLEN(?targetMotifMatchCigarP0ACC7MF_01631329) - STRLEN(REPLACE(?targetMotifMatchCigarP0ACC7MF_01631329, CONCAT('^(?:[a-z]*(?:[A-Z]|-)){', STR(?step1339), '}'), ''))))) - STRLEN(REPLACE(SUBSTR(?targetMotifMatchCigarP0ACC7MF_01631329, 1, (STRLEN(?targetMotifMatchCigarP0ACC7MF_01631329) - STRLEN(REPLACE(?targetMotifMatchCigarP0ACC7MF_01631329, CONCAT('^(?:[a-z]*(?:[A-Z]|-)){', STR(?step1339), '}'), '')))), '[^-]', ''))) AS ?step2340) . BIND(((?step2340 + ?targetMotifMatchRegionMatchBeginPositionMF_01631330) - 1) AS ?thisPositionOn82) . BIND(?thisPositionOn82 AS ?thisPositionOn83) . BIND(?this AS ?pfs1t341) . BIND(URI(CONCAT(STR(?thisSequence), '#position', STR(?thisPositionOn82))) AS ?pfsb79) . BIND(URI(CONCAT(STR(?thisSequence), '#position', STR(?thisPositionOn83))) AS ?pfse80) . FILTER ((SUBSTR(?thisSequenceValue, ?thisPositionOn82, 1) = 'N')) . BIND(URI(CONCAT(STR(?this), '#MF_01631a78')) AS ?annotation78) . BIND(?this AS ?pfs77) . } OPTIONAL { ?this up:sequence ?thisSequence . ?thisSequence rdf:value ?thisSequenceValue . ?templateMotifMatch346 faldo:location ?templateMotifSequenceMatchRegionP0ACC7347 ; edam:is_output_of ?templateMotifSequenceProfileAlignmentOperationP0ACC7349 ; rdf:type edam:data_0869 ; rdf:value ?templateMotifCigarP0ACC7MF_01631342 . ?templateMotifSequenceMatchRegionP0ACC7347 faldo:begin ?templateMotifSequenceMatchBeginP0ACC7348 . ?templateMotifSequenceMatchBeginP0ACC7348 faldo:position ?templateMotifSequenceMatchBeginPositionP0ACC7343 ; faldo:reference isoform:P0ACC7-1 . ?templateMotifSequenceProfileAlignmentOperationP0ACC7349 edam:has_input signature:MF_01631 ; rdf:type edam:operation_0300 . ?targetMotifMatch350 faldo:location ?targetMotifMatchRegionMatch351 ; edam:is_output_of ?targetMotifSequenceAlignmentOperationMF_01631353 ; rdf:type edam:data_0869 ; rdf:value ?targetMotifMatchCigarP0ACC7MF_01631344 . ?targetMotifMatchRegionMatch351 faldo:begin ?targetMotifMatchRegionMatchBeginMF_01631352 . ?targetMotifMatchRegionMatchBeginMF_01631352 faldo:position ?targetMotifMatchRegionMatchBeginPositionMF_01631345 ; faldo:reference ?thisSequence . ?targetMotifSequenceAlignmentOperationMF_01631353 edam:has_input signature:MF_01631 ; rdf:type edam:operation_0300 . BIND(STRLEN(REPLACE(SUBSTR(?templateMotifCigarP0ACC7MF_01631342, 1, (STRLEN(?templateMotifCigarP0ACC7MF_01631342) - STRLEN(REPLACE(?templateMotifCigarP0ACC7MF_01631342, CONCAT('^(?:-*[^-]){', STR(((25 - ?templateMotifSequenceMatchBeginPositionP0ACC7343) + 1)), '}'), '')))), '[a-z]', '')) AS ?step1354) . BIND((STRLEN(SUBSTR(?targetMotifMatchCigarP0ACC7MF_01631344, 1, (STRLEN(?targetMotifMatchCigarP0ACC7MF_01631344) - STRLEN(REPLACE(?targetMotifMatchCigarP0ACC7MF_01631344, CONCAT('^(?:[a-z]*(?:[A-Z]|-)){', STR(?step1354), '}'), ''))))) - STRLEN(REPLACE(SUBSTR(?targetMotifMatchCigarP0ACC7MF_01631344, 1, (STRLEN(?targetMotifMatchCigarP0ACC7MF_01631344) - STRLEN(REPLACE(?targetMotifMatchCigarP0ACC7MF_01631344, CONCAT('^(?:[a-z]*(?:[A-Z]|-)){', STR(?step1354), '}'), '')))), '[^-]', ''))) AS ?step2355) . BIND(((?step2355 + ?targetMotifMatchRegionMatchBeginPositionMF_01631345) - 1) AS ?thisPositionOn89) . BIND(?thisPositionOn89 AS ?thisPositionOn90) . BIND(?this AS ?pfs1t356) . BIND(URI(CONCAT(STR(?thisSequence), '#position', STR(?thisPositionOn89))) AS ?pfsb86) . BIND(URI(CONCAT(STR(?thisSequence), '#position', STR(?thisPositionOn90))) AS ?pfse87) . FILTER ((SUBSTR(?thisSequenceValue, ?thisPositionOn89, 1) = 'K')) . BIND(URI(CONCAT(STR(?this), '#MF_01631a85')) AS ?annotation85) . BIND(?this AS ?pfs84) . } OPTIONAL { ?this up:sequence ?thisSequence . ?thisSequence rdf:value ?thisSequenceValue . ?templateMotifMatch361 faldo:location ?templateMotifSequenceMatchRegionP0ACC7362 ; edam:is_output_of ?templateMotifSequenceProfileAlignmentOperationP0ACC7364 ; rdf:type edam:data_0869 ; rdf:value ?templateMotifCigarP0ACC7MF_01631357 . ?templateMotifSequenceMatchRegionP0ACC7362 faldo:begin ?templateMotifSequenceMatchBeginP0ACC7363 . ?templateMotifSequenceMatchBeginP0ACC7363 faldo:position ?templateMotifSequenceMatchBeginPositionP0ACC7358 ; faldo:reference isoform:P0ACC7-1 . ?templateMotifSequenceProfileAlignmentOperationP0ACC7364 edam:has_input signature:MF_01631 ; rdf:type edam:operation_0300 . ?targetMotifMatch365 faldo:location ?targetMotifMatchRegionMatch366 ; edam:is_output_of ?targetMotifSequenceAlignmentOperationMF_01631368 ; rdf:type edam:data_0869 ; rdf:value ?targetMotifMatchCigarP0ACC7MF_01631359 . ?targetMotifMatchRegionMatch366 faldo:begin ?targetMotifMatchRegionMatchBeginMF_01631367 . ?targetMotifMatchRegionMatchBeginMF_01631367 faldo:position ?targetMotifMatchRegionMatchBeginPositionMF_01631360 ; faldo:reference ?thisSequence . ?targetMotifSequenceAlignmentOperationMF_01631368 edam:has_input signature:MF_01631 ; rdf:type edam:operation_0300 . BIND(STRLEN(REPLACE(SUBSTR(?templateMotifCigarP0ACC7MF_01631357, 1, (STRLEN(?templateMotifCigarP0ACC7MF_01631357) - STRLEN(REPLACE(?templateMotifCigarP0ACC7MF_01631357, CONCAT('^(?:-*[^-]){', STR(((76 - ?templateMotifSequenceMatchBeginPositionP0ACC7358) + 1)), '}'), '')))), '[a-z]', '')) AS ?step1369) . BIND((STRLEN(SUBSTR(?targetMotifMatchCigarP0ACC7MF_01631359, 1, (STRLEN(?targetMotifMatchCigarP0ACC7MF_01631359) - STRLEN(REPLACE(?targetMotifMatchCigarP0ACC7MF_01631359, CONCAT('^(?:[a-z]*(?:[A-Z]|-)){', STR(?step1369), '}'), ''))))) - STRLEN(REPLACE(SUBSTR(?targetMotifMatchCigarP0ACC7MF_01631359, 1, (STRLEN(?targetMotifMatchCigarP0ACC7MF_01631359) - STRLEN(REPLACE(?targetMotifMatchCigarP0ACC7MF_01631359, CONCAT('^(?:[a-z]*(?:[A-Z]|-)){', STR(?step1369), '}'), '')))), '[^-]', ''))) AS ?step2370) . BIND(((?step2370 + ?targetMotifMatchRegionMatchBeginPositionMF_01631360) - 1) AS ?thisPositionOn96) . BIND(?thisPositionOn96 AS ?thisPositionOn97) . BIND(?this AS ?pfs1t371) . BIND(URI(CONCAT(STR(?thisSequence), '#position', STR(?thisPositionOn96))) AS ?pfsb93) . BIND(URI(CONCAT(STR(?thisSequence), '#position', STR(?thisPositionOn97))) AS ?pfse94) . FILTER ((SUBSTR(?thisSequenceValue, ?thisPositionOn96, 1) = 'Q')) . BIND(URI(CONCAT(STR(?this), '#MF_01631a92')) AS ?annotation92) . BIND(?this AS ?pfs91) . } OPTIONAL { ?this up:sequence ?thisSequence . ?thisSequence rdf:value ?thisSequenceValue . ?templateMotifMatch376 faldo:location ?templateMotifSequenceMatchRegionP0ACC7377 ; edam:is_output_of ?templateMotifSequenceProfileAlignmentOperationP0ACC7379 ; rdf:type edam:data_0869 ; rdf:value ?templateMotifCigarP0ACC7MF_01631372 . ?templateMotifSequenceMatchRegionP0ACC7377 faldo:begin ?templateMotifSequenceMatchBeginP0ACC7378 . ?templateMotifSequenceMatchBeginP0ACC7378 faldo:position ?templateMotifSequenceMatchBeginPositionP0ACC7373 ; faldo:reference isoform:P0ACC7-1 . ?templateMotifSequenceProfileAlignmentOperationP0ACC7379 edam:has_input signature:MF_01631 ; rdf:type edam:operation_0300 . ?targetMotifMatch380 faldo:location ?targetMotifMatchRegionMatch381 ; edam:is_output_of ?targetMotifSequenceAlignmentOperationMF_01631383 ; rdf:type edam:data_0869 ; rdf:value ?targetMotifMatchCigarP0ACC7MF_01631374 . ?targetMotifMatchRegionMatch381 faldo:begin ?targetMotifMatchRegionMatchBeginMF_01631382 . ?targetMotifMatchRegionMatchBeginMF_01631382 faldo:position ?targetMotifMatchRegionMatchBeginPositionMF_01631375 ; faldo:reference ?thisSequence . ?targetMotifSequenceAlignmentOperationMF_01631383 edam:has_input signature:MF_01631 ; rdf:type edam:operation_0300 . BIND(STRLEN(REPLACE(SUBSTR(?templateMotifCigarP0ACC7MF_01631372, 1, (STRLEN(?templateMotifCigarP0ACC7MF_01631372) - STRLEN(REPLACE(?templateMotifCigarP0ACC7MF_01631372, CONCAT('^(?:-*[^-]){', STR(((140 - ?templateMotifSequenceMatchBeginPositionP0ACC7373) + 1)), '}'), '')))), '[a-z]', '')) AS ?step1384) . BIND((STRLEN(SUBSTR(?targetMotifMatchCigarP0ACC7MF_01631374, 1, (STRLEN(?targetMotifMatchCigarP0ACC7MF_01631374) - STRLEN(REPLACE(?targetMotifMatchCigarP0ACC7MF_01631374, CONCAT('^(?:[a-z]*(?:[A-Z]|-)){', STR(?step1384), '}'), ''))))) - STRLEN(REPLACE(SUBSTR(?targetMotifMatchCigarP0ACC7MF_01631374, 1, (STRLEN(?targetMotifMatchCigarP0ACC7MF_01631374) - STRLEN(REPLACE(?targetMotifMatchCigarP0ACC7MF_01631374, CONCAT('^(?:[a-z]*(?:[A-Z]|-)){', STR(?step1384), '}'), '')))), '[^-]', ''))) AS ?step2385) . BIND(((?step2385 + ?targetMotifMatchRegionMatchBeginPositionMF_01631375) - 1) AS ?thisPositionOn103) . BIND(?thisPositionOn103 AS ?thisPositionOn104) . BIND(?this AS ?pfs1t386) . BIND(URI(CONCAT(STR(?thisSequence), '#position', STR(?thisPositionOn103))) AS ?pfsb100) . BIND(URI(CONCAT(STR(?thisSequence), '#position', STR(?thisPositionOn104))) AS ?pfse101) . FILTER ((SUBSTR(?thisSequenceValue, ?thisPositionOn103, 1) = 'G')) . BIND(URI(CONCAT(STR(?this), '#MF_01631a99')) AS ?annotation99) . BIND(?this AS ?pfs98) . } OPTIONAL { ?this up:sequence ?thisSequence . ?thisSequence rdf:value ?thisSequenceValue . ?templateMotifMatch391 faldo:location ?templateMotifSequenceMatchRegionP0ACC7392 ; edam:is_output_of ?templateMotifSequenceProfileAlignmentOperationP0ACC7394 ; rdf:type edam:data_0869 ; rdf:value ?templateMotifCigarP0ACC7MF_01631387 . ?templateMotifSequenceMatchRegionP0ACC7392 faldo:begin ?templateMotifSequenceMatchBeginP0ACC7393 . ?templateMotifSequenceMatchBeginP0ACC7393 faldo:position ?templateMotifSequenceMatchBeginPositionP0ACC7388 ; faldo:reference isoform:P0ACC7-1 . ?templateMotifSequenceProfileAlignmentOperationP0ACC7394 edam:has_input signature:MF_01631 ; rdf:type edam:operation_0300 . ?targetMotifMatch395 faldo:location ?targetMotifMatchRegionMatch396 ; edam:is_output_of ?targetMotifSequenceAlignmentOperationMF_01631398 ; rdf:type edam:data_0869 ; rdf:value ?targetMotifMatchCigarP0ACC7MF_01631389 . ?targetMotifMatchRegionMatch396 faldo:begin ?targetMotifMatchRegionMatchBeginMF_01631397 . ?targetMotifMatchRegionMatchBeginMF_01631397 faldo:position ?targetMotifMatchRegionMatchBeginPositionMF_01631390 ; faldo:reference ?thisSequence . ?targetMotifSequenceAlignmentOperationMF_01631398 edam:has_input signature:MF_01631 ; rdf:type edam:operation_0300 . BIND(STRLEN(REPLACE(SUBSTR(?templateMotifCigarP0ACC7MF_01631387, 1, (STRLEN(?templateMotifCigarP0ACC7MF_01631387) - STRLEN(REPLACE(?templateMotifCigarP0ACC7MF_01631387, CONCAT('^(?:-*[^-]){', STR(((154 - ?templateMotifSequenceMatchBeginPositionP0ACC7388) + 1)), '}'), '')))), '[a-z]', '')) AS ?step1399) . BIND((STRLEN(SUBSTR(?targetMotifMatchCigarP0ACC7MF_01631389, 1, (STRLEN(?targetMotifMatchCigarP0ACC7MF_01631389) - STRLEN(REPLACE(?targetMotifMatchCigarP0ACC7MF_01631389, CONCAT('^(?:[a-z]*(?:[A-Z]|-)){', STR(?step1399), '}'), ''))))) - STRLEN(REPLACE(SUBSTR(?targetMotifMatchCigarP0ACC7MF_01631389, 1, (STRLEN(?targetMotifMatchCigarP0ACC7MF_01631389) - STRLEN(REPLACE(?targetMotifMatchCigarP0ACC7MF_01631389, CONCAT('^(?:[a-z]*(?:[A-Z]|-)){', STR(?step1399), '}'), '')))), '[^-]', ''))) AS ?step2400) . BIND(((?step2400 + ?targetMotifMatchRegionMatchBeginPositionMF_01631390) - 1) AS ?thisPositionOn110) . BIND(?thisPositionOn110 AS ?thisPositionOn111) . BIND(?this AS ?pfs1t401) . BIND(URI(CONCAT(STR(?thisSequence), '#position', STR(?thisPositionOn110))) AS ?pfsb107) . BIND(URI(CONCAT(STR(?thisSequence), '#position', STR(?thisPositionOn111))) AS ?pfse108) . FILTER ((SUBSTR(?thisSequenceValue, ?thisPositionOn110, 1) = 'E')) . BIND(URI(CONCAT(STR(?this), '#MF_01631a106')) AS ?annotation106) . BIND(?this AS ?pfs105) . } OPTIONAL { ?this up:sequence ?thisSequence . ?thisSequence rdf:value ?thisSequenceValue . ?templateMotifMatch406 faldo:location ?templateMotifSequenceMatchRegionP0ACC7407 ; edam:is_output_of ?templateMotifSequenceProfileAlignmentOperationP0ACC7409 ; rdf:type edam:data_0869 ; rdf:value ?templateMotifCigarP0ACC7MF_01631402 . ?templateMotifSequenceMatchRegionP0ACC7407 faldo:begin ?templateMotifSequenceMatchBeginP0ACC7408 . ?templateMotifSequenceMatchBeginP0ACC7408 faldo:position ?templateMotifSequenceMatchBeginPositionP0ACC7403 ; faldo:reference isoform:P0ACC7-1 . ?templateMotifSequenceProfileAlignmentOperationP0ACC7409 edam:has_input signature:MF_01631 ; rdf:type edam:operation_0300 . ?targetMotifMatch410 faldo:location ?targetMotifMatchRegionMatch411 ; edam:is_output_of ?targetMotifSequenceAlignmentOperationMF_01631413 ; rdf:type edam:data_0869 ; rdf:value ?targetMotifMatchCigarP0ACC7MF_01631404 . ?targetMotifMatchRegionMatch411 faldo:begin ?targetMotifMatchRegionMatchBeginMF_01631412 . ?targetMotifMatchRegionMatchBeginMF_01631412 faldo:position ?targetMotifMatchRegionMatchBeginPositionMF_01631405 ; faldo:reference ?thisSequence . ?targetMotifSequenceAlignmentOperationMF_01631413 edam:has_input signature:MF_01631 ; rdf:type edam:operation_0300 . BIND(STRLEN(REPLACE(SUBSTR(?templateMotifCigarP0ACC7MF_01631402, 1, (STRLEN(?templateMotifCigarP0ACC7MF_01631402) - STRLEN(REPLACE(?templateMotifCigarP0ACC7MF_01631402, CONCAT('^(?:-*[^-]){', STR(((169 - ?templateMotifSequenceMatchBeginPositionP0ACC7403) + 1)), '}'), '')))), '[a-z]', '')) AS ?step1414) . BIND((STRLEN(SUBSTR(?targetMotifMatchCigarP0ACC7MF_01631404, 1, (STRLEN(?targetMotifMatchCigarP0ACC7MF_01631404) - STRLEN(REPLACE(?targetMotifMatchCigarP0ACC7MF_01631404, CONCAT('^(?:[a-z]*(?:[A-Z]|-)){', STR(?step1414), '}'), ''))))) - STRLEN(REPLACE(SUBSTR(?targetMotifMatchCigarP0ACC7MF_01631404, 1, (STRLEN(?targetMotifMatchCigarP0ACC7MF_01631404) - STRLEN(REPLACE(?targetMotifMatchCigarP0ACC7MF_01631404, CONCAT('^(?:[a-z]*(?:[A-Z]|-)){', STR(?step1414), '}'), '')))), '[^-]', ''))) AS ?step2415) . BIND(((?step2415 + ?targetMotifMatchRegionMatchBeginPositionMF_01631405) - 1) AS ?thisPositionOn117) . BIND(?thisPositionOn117 AS ?thisPositionOn118) . BIND(?this AS ?pfs1t416) . BIND(URI(CONCAT(STR(?thisSequence), '#position', STR(?thisPositionOn117))) AS ?pfsb114) . BIND(URI(CONCAT(STR(?thisSequence), '#position', STR(?thisPositionOn118))) AS ?pfse115) . FILTER ((SUBSTR(?thisSequenceValue, ?thisPositionOn117, 1) = 'N')) . BIND(URI(CONCAT(STR(?this), '#MF_01631a113')) AS ?annotation113) . BIND(?this AS ?pfs112) . } OPTIONAL { ?this up:sequence ?thisSequence . ?thisSequence rdf:value ?thisSequenceValue . ?templateMotifMatch421 faldo:location ?templateMotifSequenceMatchRegionP0ACC7422 ; edam:is_output_of ?templateMotifSequenceProfileAlignmentOperationP0ACC7424 ; rdf:type edam:data_0869 ; rdf:value ?templateMotifCigarP0ACC7MF_01631417 . ?templateMotifSequenceMatchRegionP0ACC7422 faldo:begin ?templateMotifSequenceMatchBeginP0ACC7423 . ?templateMotifSequenceMatchBeginP0ACC7423 faldo:position ?templateMotifSequenceMatchBeginPositionP0ACC7418 ; faldo:reference isoform:P0ACC7-1 . ?templateMotifSequenceProfileAlignmentOperationP0ACC7424 edam:has_input signature:MF_01631 ; rdf:type edam:operation_0300 . ?targetMotifMatch425 faldo:location ?targetMotifMatchRegionMatch426 ; edam:is_output_of ?targetMotifSequenceAlignmentOperationMF_01631428 ; rdf:type edam:data_0869 ; rdf:value ?targetMotifMatchCigarP0ACC7MF_01631419 . ?targetMotifMatchRegionMatch426 faldo:begin ?targetMotifMatchRegionMatchBeginMF_01631427 . ?targetMotifMatchRegionMatchBeginMF_01631427 faldo:position ?targetMotifMatchRegionMatchBeginPositionMF_01631420 ; faldo:reference ?thisSequence . ?targetMotifSequenceAlignmentOperationMF_01631428 edam:has_input signature:MF_01631 ; rdf:type edam:operation_0300 . BIND(STRLEN(REPLACE(SUBSTR(?templateMotifCigarP0ACC7MF_01631417, 1, (STRLEN(?templateMotifCigarP0ACC7MF_01631417) - STRLEN(REPLACE(?templateMotifCigarP0ACC7MF_01631417, CONCAT('^(?:-*[^-]){', STR(((227 - ?templateMotifSequenceMatchBeginPositionP0ACC7418) + 1)), '}'), '')))), '[a-z]', '')) AS ?step1429) . BIND((STRLEN(SUBSTR(?targetMotifMatchCigarP0ACC7MF_01631419, 1, (STRLEN(?targetMotifMatchCigarP0ACC7MF_01631419) - STRLEN(REPLACE(?targetMotifMatchCigarP0ACC7MF_01631419, CONCAT('^(?:[a-z]*(?:[A-Z]|-)){', STR(?step1429), '}'), ''))))) - STRLEN(REPLACE(SUBSTR(?targetMotifMatchCigarP0ACC7MF_01631419, 1, (STRLEN(?targetMotifMatchCigarP0ACC7MF_01631419) - STRLEN(REPLACE(?targetMotifMatchCigarP0ACC7MF_01631419, CONCAT('^(?:[a-z]*(?:[A-Z]|-)){', STR(?step1429), '}'), '')))), '[^-]', ''))) AS ?step2430) . BIND(((?step2430 + ?targetMotifMatchRegionMatchBeginPositionMF_01631420) - 1) AS ?thisPositionOn124) . BIND(?thisPositionOn124 AS ?thisPositionOn125) . BIND(?this AS ?pfs1t431) . BIND(URI(CONCAT(STR(?thisSequence), '#position', STR(?thisPositionOn124))) AS ?pfsb121) . BIND(URI(CONCAT(STR(?thisSequence), '#position', STR(?thisPositionOn125))) AS ?pfse122) . FILTER ((SUBSTR(?thisSequenceValue, ?thisPositionOn124, 1) = 'N')) . BIND(URI(CONCAT(STR(?this), '#MF_01631a120')) AS ?annotation120) . BIND(?this AS ?pfs119) . } OPTIONAL { ?this up:sequence ?thisSequence . ?thisSequence rdf:value ?thisSequenceValue . ?templateMotifMatch436 faldo:location ?templateMotifSequenceMatchRegionP0ACC7437 ; edam:is_output_of ?templateMotifSequenceProfileAlignmentOperationP0ACC7439 ; rdf:type edam:data_0869 ; rdf:value ?templateMotifCigarP0ACC7MF_01631432 . ?templateMotifSequenceMatchRegionP0ACC7437 faldo:begin ?templateMotifSequenceMatchBeginP0ACC7438 . ?templateMotifSequenceMatchBeginP0ACC7438 faldo:position ?templateMotifSequenceMatchBeginPositionP0ACC7433 ; faldo:reference isoform:P0ACC7-1 . ?templateMotifSequenceProfileAlignmentOperationP0ACC7439 edam:has_input signature:MF_01631 ; rdf:type edam:operation_0300 . ?targetMotifMatch440 faldo:location ?targetMotifMatchRegionMatch441 ; edam:is_output_of ?targetMotifSequenceAlignmentOperationMF_01631443 ; rdf:type edam:data_0869 ; rdf:value ?targetMotifMatchCigarP0ACC7MF_01631434 . ?targetMotifMatchRegionMatch441 faldo:begin ?targetMotifMatchRegionMatchBeginMF_01631442 . ?targetMotifMatchRegionMatchBeginMF_01631442 faldo:position ?targetMotifMatchRegionMatchBeginPositionMF_01631435 ; faldo:reference ?thisSequence . ?targetMotifSequenceAlignmentOperationMF_01631443 edam:has_input signature:MF_01631 ; rdf:type edam:operation_0300 . BIND(STRLEN(REPLACE(SUBSTR(?templateMotifCigarP0ACC7MF_01631432, 1, (STRLEN(?templateMotifCigarP0ACC7MF_01631432) - STRLEN(REPLACE(?templateMotifCigarP0ACC7MF_01631432, CONCAT('^(?:-*[^-]){', STR(((333 - ?templateMotifSequenceMatchBeginPositionP0ACC7433) + 1)), '}'), '')))), '[a-z]', '')) AS ?step1444) . BIND((STRLEN(SUBSTR(?targetMotifMatchCigarP0ACC7MF_01631434, 1, (STRLEN(?targetMotifMatchCigarP0ACC7MF_01631434) - STRLEN(REPLACE(?targetMotifMatchCigarP0ACC7MF_01631434, CONCAT('^(?:[a-z]*(?:[A-Z]|-)){', STR(?step1444), '}'), ''))))) - STRLEN(REPLACE(SUBSTR(?targetMotifMatchCigarP0ACC7MF_01631434, 1, (STRLEN(?targetMotifMatchCigarP0ACC7MF_01631434) - STRLEN(REPLACE(?targetMotifMatchCigarP0ACC7MF_01631434, CONCAT('^(?:[a-z]*(?:[A-Z]|-)){', STR(?step1444), '}'), '')))), '[^-]', ''))) AS ?step2445) . BIND(((?step2445 + ?targetMotifMatchRegionMatchBeginPositionMF_01631435) - 1) AS ?thisPositionOn131) . BIND(?thisPositionOn131 AS ?thisPositionOn132) . BIND(?this AS ?pfs1t446) . BIND(URI(CONCAT(STR(?thisSequence), '#position', STR(?thisPositionOn131))) AS ?pfsb128) . BIND(URI(CONCAT(STR(?thisSequence), '#position', STR(?thisPositionOn132))) AS ?pfse129) . FILTER ((SUBSTR(?thisSequenceValue, ?thisPositionOn131, 1) = 'R')) . BIND(URI(CONCAT(STR(?this), '#MF_01631a127')) AS ?annotation127) . BIND(?this AS ?pfs126) . } OPTIONAL { ?this up:sequence ?thisSequence . ?thisSequence rdf:value ?thisSequenceValue . ?templateMotifMatch451 faldo:location ?templateMotifSequenceMatchRegionP0ACC7452 ; edam:is_output_of ?templateMotifSequenceProfileAlignmentOperationP0ACC7454 ; rdf:type edam:data_0869 ; rdf:value ?templateMotifCigarP0ACC7MF_01631447 . ?templateMotifSequenceMatchRegionP0ACC7452 faldo:begin ?templateMotifSequenceMatchBeginP0ACC7453 . ?templateMotifSequenceMatchBeginP0ACC7453 faldo:position ?templateMotifSequenceMatchBeginPositionP0ACC7448 ; faldo:reference isoform:P0ACC7-1 . ?templateMotifSequenceProfileAlignmentOperationP0ACC7454 edam:has_input signature:MF_01631 ; rdf:type edam:operation_0300 . ?targetMotifMatch455 faldo:location ?targetMotifMatchRegionMatch456 ; edam:is_output_of ?targetMotifSequenceAlignmentOperationMF_01631458 ; rdf:type edam:data_0869 ; rdf:value ?targetMotifMatchCigarP0ACC7MF_01631449 . ?targetMotifMatchRegionMatch456 faldo:begin ?targetMotifMatchRegionMatchBeginMF_01631457 . ?targetMotifMatchRegionMatchBeginMF_01631457 faldo:position ?targetMotifMatchRegionMatchBeginPositionMF_01631450 ; faldo:reference ?thisSequence . ?targetMotifSequenceAlignmentOperationMF_01631458 edam:has_input signature:MF_01631 ; rdf:type edam:operation_0300 . BIND(STRLEN(REPLACE(SUBSTR(?templateMotifCigarP0ACC7MF_01631447, 1, (STRLEN(?templateMotifCigarP0ACC7MF_01631447) - STRLEN(REPLACE(?templateMotifCigarP0ACC7MF_01631447, CONCAT('^(?:-*[^-]){', STR(((351 - ?templateMotifSequenceMatchBeginPositionP0ACC7448) + 1)), '}'), '')))), '[a-z]', '')) AS ?step1459) . BIND((STRLEN(SUBSTR(?targetMotifMatchCigarP0ACC7MF_01631449, 1, (STRLEN(?targetMotifMatchCigarP0ACC7MF_01631449) - STRLEN(REPLACE(?targetMotifMatchCigarP0ACC7MF_01631449, CONCAT('^(?:[a-z]*(?:[A-Z]|-)){', STR(?step1459), '}'), ''))))) - STRLEN(REPLACE(SUBSTR(?targetMotifMatchCigarP0ACC7MF_01631449, 1, (STRLEN(?targetMotifMatchCigarP0ACC7MF_01631449) - STRLEN(REPLACE(?targetMotifMatchCigarP0ACC7MF_01631449, CONCAT('^(?:[a-z]*(?:[A-Z]|-)){', STR(?step1459), '}'), '')))), '[^-]', ''))) AS ?step2460) . BIND(((?step2460 + ?targetMotifMatchRegionMatchBeginPositionMF_01631450) - 1) AS ?thisPositionOn138) . BIND(?thisPositionOn138 AS ?thisPositionOn139) . BIND(?this AS ?pfs1t461) . BIND(URI(CONCAT(STR(?thisSequence), '#position', STR(?thisPositionOn138))) AS ?pfsb135) . BIND(URI(CONCAT(STR(?thisSequence), '#position', STR(?thisPositionOn139))) AS ?pfse136) . FILTER ((SUBSTR(?thisSequenceValue, ?thisPositionOn138, 1) = 'K')) . BIND(URI(CONCAT(STR(?this), '#MF_01631a134')) AS ?annotation134) . BIND(?this AS ?pfs133) . } OPTIONAL { ?this up:sequence ?thisSequence . ?thisSequence rdf:value ?thisSequenceValue . ?templateMotifMatch466 faldo:location ?templateMotifSequenceMatchRegionP0ACC7467 ; edam:is_output_of ?templateMotifSequenceProfileAlignmentOperationP0ACC7469 ; rdf:type edam:data_0869 ; rdf:value ?templateMotifCigarP0ACC7MF_01631462 . ?templateMotifSequenceMatchRegionP0ACC7467 faldo:begin ?templateMotifSequenceMatchBeginP0ACC7468 . ?templateMotifSequenceMatchBeginP0ACC7468 faldo:position ?templateMotifSequenceMatchBeginPositionP0ACC7463 ; faldo:reference isoform:P0ACC7-1 . ?templateMotifSequenceProfileAlignmentOperationP0ACC7469 edam:has_input signature:MF_01631 ; rdf:type edam:operation_0300 . ?targetMotifMatch470 faldo:location ?targetMotifMatchRegionMatch471 ; edam:is_output_of ?targetMotifSequenceAlignmentOperationMF_01631473 ; rdf:type edam:data_0869 ; rdf:value ?targetMotifMatchCigarP0ACC7MF_01631464 . ?targetMotifMatchRegionMatch471 faldo:begin ?targetMotifMatchRegionMatchBeginMF_01631472 . ?targetMotifMatchRegionMatchBeginMF_01631472 faldo:position ?targetMotifMatchRegionMatchBeginPositionMF_01631465 ; faldo:reference ?thisSequence . ?targetMotifSequenceAlignmentOperationMF_01631473 edam:has_input signature:MF_01631 ; rdf:type edam:operation_0300 . BIND(STRLEN(REPLACE(SUBSTR(?templateMotifCigarP0ACC7MF_01631462, 1, (STRLEN(?templateMotifCigarP0ACC7MF_01631462) - STRLEN(REPLACE(?templateMotifCigarP0ACC7MF_01631462, CONCAT('^(?:-*[^-]){', STR(((366 - ?templateMotifSequenceMatchBeginPositionP0ACC7463) + 1)), '}'), '')))), '[a-z]', '')) AS ?step1474) . BIND((STRLEN(SUBSTR(?targetMotifMatchCigarP0ACC7MF_01631464, 1, (STRLEN(?targetMotifMatchCigarP0ACC7MF_01631464) - STRLEN(REPLACE(?targetMotifMatchCigarP0ACC7MF_01631464, CONCAT('^(?:[a-z]*(?:[A-Z]|-)){', STR(?step1474), '}'), ''))))) - STRLEN(REPLACE(SUBSTR(?targetMotifMatchCigarP0ACC7MF_01631464, 1, (STRLEN(?targetMotifMatchCigarP0ACC7MF_01631464) - STRLEN(REPLACE(?targetMotifMatchCigarP0ACC7MF_01631464, CONCAT('^(?:[a-z]*(?:[A-Z]|-)){', STR(?step1474), '}'), '')))), '[^-]', ''))) AS ?step2475) . BIND(((?step2475 + ?targetMotifMatchRegionMatchBeginPositionMF_01631465) - 1) AS ?thisPositionOn145) . BIND(?thisPositionOn145 AS ?thisPositionOn146) . BIND(?this AS ?pfs1t476) . BIND(URI(CONCAT(STR(?thisSequence), '#position', STR(?thisPositionOn145))) AS ?pfsb142) . BIND(URI(CONCAT(STR(?thisSequence), '#position', STR(?thisPositionOn146))) AS ?pfse143) . FILTER ((SUBSTR(?thisSequenceValue, ?thisPositionOn145, 1) = 'Y')) . BIND(URI(CONCAT(STR(?this), '#MF_01631a141')) AS ?annotation141) . BIND(?this AS ?pfs140) . } OPTIONAL { ?this up:sequence ?thisSequence . ?thisSequence rdf:value ?thisSequenceValue . ?templateMotifMatch481 faldo:location ?templateMotifSequenceMatchRegionP0ACC7482 ; edam:is_output_of ?templateMotifSequenceProfileAlignmentOperationP0ACC7484 ; rdf:type edam:data_0869 ; rdf:value ?templateMotifCigarP0ACC7MF_01631477 . ?templateMotifSequenceMatchRegionP0ACC7482 faldo:begin ?templateMotifSequenceMatchBeginP0ACC7483 . ?templateMotifSequenceMatchBeginP0ACC7483 faldo:position ?templateMotifSequenceMatchBeginPositionP0ACC7478 ; faldo:reference isoform:P0ACC7-1 . ?templateMotifSequenceProfileAlignmentOperationP0ACC7484 edam:has_input signature:MF_01631 ; rdf:type edam:operation_0300 . ?targetMotifMatch485 faldo:location ?targetMotifMatchRegionMatch486 ; edam:is_output_of ?targetMotifSequenceAlignmentOperationMF_01631488 ; rdf:type edam:data_0869 ; rdf:value ?targetMotifMatchCigarP0ACC7MF_01631479 . ?targetMotifMatchRegionMatch486 faldo:begin ?targetMotifMatchRegionMatchBeginMF_01631487 . ?targetMotifMatchRegionMatchBeginMF_01631487 faldo:position ?targetMotifMatchRegionMatchBeginPositionMF_01631480 ; faldo:reference ?thisSequence . ?targetMotifSequenceAlignmentOperationMF_01631488 edam:has_input signature:MF_01631 ; rdf:type edam:operation_0300 . BIND(STRLEN(REPLACE(SUBSTR(?templateMotifCigarP0ACC7MF_01631477, 1, (STRLEN(?templateMotifCigarP0ACC7MF_01631477) - STRLEN(REPLACE(?templateMotifCigarP0ACC7MF_01631477, CONCAT('^(?:-*[^-]){', STR(((377 - ?templateMotifSequenceMatchBeginPositionP0ACC7478) + 1)), '}'), '')))), '[a-z]', '')) AS ?step1489) . BIND((STRLEN(SUBSTR(?targetMotifMatchCigarP0ACC7MF_01631479, 1, (STRLEN(?targetMotifMatchCigarP0ACC7MF_01631479) - STRLEN(REPLACE(?targetMotifMatchCigarP0ACC7MF_01631479, CONCAT('^(?:[a-z]*(?:[A-Z]|-)){', STR(?step1489), '}'), ''))))) - STRLEN(REPLACE(SUBSTR(?targetMotifMatchCigarP0ACC7MF_01631479, 1, (STRLEN(?targetMotifMatchCigarP0ACC7MF_01631479) - STRLEN(REPLACE(?targetMotifMatchCigarP0ACC7MF_01631479, CONCAT('^(?:[a-z]*(?:[A-Z]|-)){', STR(?step1489), '}'), '')))), '[^-]', ''))) AS ?step2490) . BIND(((?step2490 + ?targetMotifMatchRegionMatchBeginPositionMF_01631480) - 1) AS ?thisPositionOn152) . BIND(?thisPositionOn152 AS ?thisPositionOn153) . BIND(?this AS ?pfs1t491) . BIND(URI(CONCAT(STR(?thisSequence), '#position', STR(?thisPositionOn152))) AS ?pfsb149) . BIND(URI(CONCAT(STR(?thisSequence), '#position', STR(?thisPositionOn153))) AS ?pfse150) . FILTER ((SUBSTR(?thisSequenceValue, ?thisPositionOn152, 1) = 'N')) . BIND(URI(CONCAT(STR(?this), '#MF_01631a148')) AS ?annotation148) . BIND(?this AS ?pfs147) . } OPTIONAL { ?this up:sequence ?thisSequence . ?thisSequence rdf:value ?thisSequenceValue . ?templateMotifMatch496 faldo:location ?templateMotifSequenceMatchRegionP0ACC7497 ; edam:is_output_of ?templateMotifSequenceProfileAlignmentOperationP0ACC7499 ; rdf:type edam:data_0869 ; rdf:value ?templateMotifCigarP0ACC7MF_01631492 . ?templateMotifSequenceMatchRegionP0ACC7497 faldo:begin ?templateMotifSequenceMatchBeginP0ACC7498 . ?templateMotifSequenceMatchBeginP0ACC7498 faldo:position ?templateMotifSequenceMatchBeginPositionP0ACC7493 ; faldo:reference isoform:P0ACC7-1 . ?templateMotifSequenceProfileAlignmentOperationP0ACC7499 edam:has_input signature:MF_01631 ; rdf:type edam:operation_0300 . ?targetMotifMatch500 faldo:location ?targetMotifMatchRegionMatch501 ; edam:is_output_of ?targetMotifSequenceAlignmentOperationMF_01631503 ; rdf:type edam:data_0869 ; rdf:value ?targetMotifMatchCigarP0ACC7MF_01631494 . ?targetMotifMatchRegionMatch501 faldo:begin ?targetMotifMatchRegionMatchBeginMF_01631502 . ?targetMotifMatchRegionMatchBeginMF_01631502 faldo:position ?targetMotifMatchRegionMatchBeginPositionMF_01631495 ; faldo:reference ?thisSequence . ?targetMotifSequenceAlignmentOperationMF_01631503 edam:has_input signature:MF_01631 ; rdf:type edam:operation_0300 . BIND(STRLEN(REPLACE(SUBSTR(?templateMotifCigarP0ACC7MF_01631492, 1, (STRLEN(?templateMotifCigarP0ACC7MF_01631492) - STRLEN(REPLACE(?templateMotifCigarP0ACC7MF_01631492, CONCAT('^(?:-*[^-]){', STR(((380 - ?templateMotifSequenceMatchBeginPositionP0ACC7493) + 1)), '}'), '')))), '[a-z]', '')) AS ?step1504) . BIND((STRLEN(SUBSTR(?targetMotifMatchCigarP0ACC7MF_01631494, 1, (STRLEN(?targetMotifMatchCigarP0ACC7MF_01631494) - STRLEN(REPLACE(?targetMotifMatchCigarP0ACC7MF_01631494, CONCAT('^(?:[a-z]*(?:[A-Z]|-)){', STR(?step1504), '}'), ''))))) - STRLEN(REPLACE(SUBSTR(?targetMotifMatchCigarP0ACC7MF_01631494, 1, (STRLEN(?targetMotifMatchCigarP0ACC7MF_01631494) - STRLEN(REPLACE(?targetMotifMatchCigarP0ACC7MF_01631494, CONCAT('^(?:[a-z]*(?:[A-Z]|-)){', STR(?step1504), '}'), '')))), '[^-]', ''))) AS ?step2505) . BIND(((?step2505 + ?targetMotifMatchRegionMatchBeginPositionMF_01631495) - 1) AS ?thisPositionOn159) . BIND(?thisPositionOn159 AS ?thisPositionOn160) . BIND(?this AS ?pfs1t506) . BIND(URI(CONCAT(STR(?thisSequence), '#position', STR(?thisPositionOn159))) AS ?pfsb156) . BIND(URI(CONCAT(STR(?thisSequence), '#position', STR(?thisPositionOn160))) AS ?pfse157) . FILTER ((SUBSTR(?thisSequenceValue, ?thisPositionOn159, 1) = 'A')) . BIND(URI(CONCAT(STR(?this), '#MF_01631a155')) AS ?annotation155) . BIND(?this AS ?pfs154) . } OPTIONAL { ?this up:sequence ?thisSequence . ?thisSequence rdf:value ?thisSequenceValue . ?templateMotifMatch511 faldo:location ?templateMotifSequenceMatchRegionP0ACC7512 ; edam:is_output_of ?templateMotifSequenceProfileAlignmentOperationP0ACC7514 ; rdf:type edam:data_0869 ; rdf:value ?templateMotifCigarP0ACC7MF_01631507 . ?templateMotifSequenceMatchRegionP0ACC7512 faldo:begin ?templateMotifSequenceMatchBeginP0ACC7513 . ?templateMotifSequenceMatchBeginP0ACC7513 faldo:position ?templateMotifSequenceMatchBeginPositionP0ACC7508 ; faldo:reference isoform:P0ACC7-1 . ?templateMotifSequenceProfileAlignmentOperationP0ACC7514 edam:has_input signature:MF_01631 ; rdf:type edam:operation_0300 . ?targetMotifMatch515 faldo:location ?targetMotifMatchRegionMatch516 ; edam:is_output_of ?targetMotifSequenceAlignmentOperationMF_01631518 ; rdf:type edam:data_0869 ; rdf:value ?targetMotifMatchCigarP0ACC7MF_01631509 . ?targetMotifMatchRegionMatch516 faldo:begin ?targetMotifMatchRegionMatchBeginMF_01631517 . ?targetMotifMatchRegionMatchBeginMF_01631517 faldo:position ?targetMotifMatchRegionMatchBeginPositionMF_01631510 ; faldo:reference ?thisSequence . ?targetMotifSequenceAlignmentOperationMF_01631518 edam:has_input signature:MF_01631 ; rdf:type edam:operation_0300 . BIND(STRLEN(REPLACE(SUBSTR(?templateMotifCigarP0ACC7MF_01631507, 1, (STRLEN(?templateMotifCigarP0ACC7MF_01631507) - STRLEN(REPLACE(?templateMotifCigarP0ACC7MF_01631507, CONCAT('^(?:-*[^-]){', STR(((405 - ?templateMotifSequenceMatchBeginPositionP0ACC7508) + 1)), '}'), '')))), '[a-z]', '')) AS ?step1519) . BIND((STRLEN(SUBSTR(?targetMotifMatchCigarP0ACC7MF_01631509, 1, (STRLEN(?targetMotifMatchCigarP0ACC7MF_01631509) - STRLEN(REPLACE(?targetMotifMatchCigarP0ACC7MF_01631509, CONCAT('^(?:[a-z]*(?:[A-Z]|-)){', STR(?step1519), '}'), ''))))) - STRLEN(REPLACE(SUBSTR(?targetMotifMatchCigarP0ACC7MF_01631509, 1, (STRLEN(?targetMotifMatchCigarP0ACC7MF_01631509) - STRLEN(REPLACE(?targetMotifMatchCigarP0ACC7MF_01631509, CONCAT('^(?:[a-z]*(?:[A-Z]|-)){', STR(?step1519), '}'), '')))), '[^-]', ''))) AS ?step2520) . BIND(((?step2520 + ?targetMotifMatchRegionMatchBeginPositionMF_01631510) - 1) AS ?thisPositionOn166) . BIND(?thisPositionOn166 AS ?thisPositionOn167) . BIND(?this AS ?pfs1t521) . BIND(URI(CONCAT(STR(?thisSequence), '#position', STR(?thisPositionOn166))) AS ?pfsb163) . BIND(URI(CONCAT(STR(?thisSequence), '#position', STR(?thisPositionOn167))) AS ?pfse164) . FILTER ((SUBSTR(?thisSequenceValue, ?thisPositionOn166, 1) = 'S')) . BIND(URI(CONCAT(STR(?this), '#MF_01631a162')) AS ?annotation162) . BIND(?this AS ?pfs161) . } OPTIONAL { ?this up:sequence ?thisSequence . ?thisSequence rdf:value ?thisSequenceValue . ?templateMotifMatch526 faldo:location ?templateMotifSequenceMatchRegionP0ACC7527 ; edam:is_output_of ?templateMotifSequenceProfileAlignmentOperationP0ACC7529 ; rdf:type edam:data_0869 ; rdf:value ?templateMotifCigarP0ACC7MF_01631522 . ?templateMotifSequenceMatchRegionP0ACC7527 faldo:begin ?templateMotifSequenceMatchBeginP0ACC7528 . ?templateMotifSequenceMatchBeginP0ACC7528 faldo:position ?templateMotifSequenceMatchBeginPositionP0ACC7523 ; faldo:reference isoform:P0ACC7-1 . ?templateMotifSequenceProfileAlignmentOperationP0ACC7529 edam:has_input signature:MF_01631 ; rdf:type edam:operation_0300 . ?targetMotifMatch530 faldo:location ?targetMotifMatchRegionMatch531 ; edam:is_output_of ?targetMotifSequenceAlignmentOperationMF_01631533 ; rdf:type edam:data_0869 ; rdf:value ?targetMotifMatchCigarP0ACC7MF_01631524 . ?targetMotifMatchRegionMatch531 faldo:begin ?targetMotifMatchRegionMatchBeginMF_01631532 . ?targetMotifMatchRegionMatchBeginMF_01631532 faldo:position ?targetMotifMatchRegionMatchBeginPositionMF_01631525 ; faldo:reference ?thisSequence . ?targetMotifSequenceAlignmentOperationMF_01631533 edam:has_input signature:MF_01631 ; rdf:type edam:operation_0300 . BIND(STRLEN(REPLACE(SUBSTR(?templateMotifCigarP0ACC7MF_01631522, 1, (STRLEN(?templateMotifCigarP0ACC7MF_01631522) - STRLEN(REPLACE(?templateMotifCigarP0ACC7MF_01631522, CONCAT('^(?:-*[^-]){', STR(((423 - ?templateMotifSequenceMatchBeginPositionP0ACC7523) + 1)), '}'), '')))), '[a-z]', '')) AS ?step1534) . BIND((STRLEN(SUBSTR(?targetMotifMatchCigarP0ACC7MF_01631524, 1, (STRLEN(?targetMotifMatchCigarP0ACC7MF_01631524) - STRLEN(REPLACE(?targetMotifMatchCigarP0ACC7MF_01631524, CONCAT('^(?:[a-z]*(?:[A-Z]|-)){', STR(?step1534), '}'), ''))))) - STRLEN(REPLACE(SUBSTR(?targetMotifMatchCigarP0ACC7MF_01631524, 1, (STRLEN(?targetMotifMatchCigarP0ACC7MF_01631524) - STRLEN(REPLACE(?targetMotifMatchCigarP0ACC7MF_01631524, CONCAT('^(?:[a-z]*(?:[A-Z]|-)){', STR(?step1534), '}'), '')))), '[^-]', ''))) AS ?step2535) . BIND(((?step2535 + ?targetMotifMatchRegionMatchBeginPositionMF_01631525) - 1) AS ?thisPositionOn173) . BIND(?thisPositionOn173 AS ?thisPositionOn174) . BIND(?this AS ?pfs1t536) . BIND(URI(CONCAT(STR(?thisSequence), '#position', STR(?thisPositionOn173))) AS ?pfsb170) . BIND(URI(CONCAT(STR(?thisSequence), '#position', STR(?thisPositionOn174))) AS ?pfse171) . FILTER (REGEX('[ACGST]', SUBSTR(?thisSequenceValue, ?thisPositionOn173, 1))) . BIND(URI(CONCAT(STR(?this), '#MF_01631a169')) AS ?annotation169) . BIND(?this AS ?pfs168) . } OPTIONAL { ?this up:sequence ?thisSequence . ?thisSequence rdf:value ?thisSequenceValue . ?templateMotifMatch541 faldo:location ?templateMotifSequenceMatchRegionP0ACC7542 ; edam:is_output_of ?templateMotifSequenceProfileAlignmentOperationP0ACC7544 ; rdf:type edam:data_0869 ; rdf:value ?templateMotifCigarP0ACC7MF_01631537 . ?templateMotifSequenceMatchRegionP0ACC7542 faldo:begin ?templateMotifSequenceMatchBeginP0ACC7543 . ?templateMotifSequenceMatchBeginP0ACC7543 faldo:position ?templateMotifSequenceMatchBeginPositionP0ACC7538 ; faldo:reference isoform:P0ACC7-1 . ?templateMotifSequenceProfileAlignmentOperationP0ACC7544 edam:has_input signature:MF_01631 ; rdf:type edam:operation_0300 . ?targetMotifMatch545 faldo:location ?targetMotifMatchRegionMatch546 ; edam:is_output_of ?targetMotifSequenceAlignmentOperationMF_01631548 ; rdf:type edam:data_0869 ; rdf:value ?targetMotifMatchCigarP0ACC7MF_01631539 . ?targetMotifMatchRegionMatch546 faldo:begin ?targetMotifMatchRegionMatchBeginMF_01631547 . ?targetMotifMatchRegionMatchBeginMF_01631547 faldo:position ?targetMotifMatchRegionMatchBeginPositionMF_01631540 ; faldo:reference ?thisSequence . ?targetMotifSequenceAlignmentOperationMF_01631548 edam:has_input signature:MF_01631 ; rdf:type edam:operation_0300 . BIND(STRLEN(REPLACE(SUBSTR(?templateMotifCigarP0ACC7MF_01631537, 1, (STRLEN(?templateMotifCigarP0ACC7MF_01631537) - STRLEN(REPLACE(?templateMotifCigarP0ACC7MF_01631537, CONCAT('^(?:-*[^-]){', STR(((440 - ?templateMotifSequenceMatchBeginPositionP0ACC7538) + 1)), '}'), '')))), '[a-z]', '')) AS ?step1549) . BIND((STRLEN(SUBSTR(?targetMotifMatchCigarP0ACC7MF_01631539, 1, (STRLEN(?targetMotifMatchCigarP0ACC7MF_01631539) - STRLEN(REPLACE(?targetMotifMatchCigarP0ACC7MF_01631539, CONCAT('^(?:[a-z]*(?:[A-Z]|-)){', STR(?step1549), '}'), ''))))) - STRLEN(REPLACE(SUBSTR(?targetMotifMatchCigarP0ACC7MF_01631539, 1, (STRLEN(?targetMotifMatchCigarP0ACC7MF_01631539) - STRLEN(REPLACE(?targetMotifMatchCigarP0ACC7MF_01631539, CONCAT('^(?:[a-z]*(?:[A-Z]|-)){', STR(?step1549), '}'), '')))), '[^-]', ''))) AS ?step2550) . BIND(((?step2550 + ?targetMotifMatchRegionMatchBeginPositionMF_01631540) - 1) AS ?thisPositionOn180) . BIND(?thisPositionOn180 AS ?thisPositionOn181) . BIND(?this AS ?pfs1t551) . BIND(URI(CONCAT(STR(?thisSequence), '#position', STR(?thisPositionOn180))) AS ?pfsb177) . BIND(URI(CONCAT(STR(?thisSequence), '#position', STR(?thisPositionOn181))) AS ?pfse178) . FILTER ((SUBSTR(?thisSequenceValue, ?thisPositionOn180, 1) = 'R')) . BIND(URI(CONCAT(STR(?this), '#MF_01631a176')) AS ?annotation176) . BIND(?this AS ?pfs175) . } }