@prefix rdf: <http://www.w3.org/1999/02/22-rdf-syntax-ns#> .
@prefix rdfs: <http://www.w3.org/2000/01/rdf-schema#> .
@prefix rdf4j: <http://rdf4j.org/schema/rdf4j#> .
@prefix sesame: <http://www.openrdf.org/schema/sesame#> .
@prefix owl: <http://www.w3.org/2002/07/owl#> .
@prefix xsd: <http://www.w3.org/2001/XMLSchema#> .
@prefix fn: <http://www.w3.org/2005/xpath-functions#> .

<http://purl.uniprot.org/unirules/MF_02231#construct> a <http://www.w3.org/ns/shacl#SPARQLRule>,
    <http://spinrdf.org/sp#Construct>;
  <https://hamap.expasy.org/rdf/vocab#addsTriple> <http://purl.uniprot.org/unirules/MF_02231#construct-template-3>,
    <http://purl.uniprot.org/unirules/MF_02231#construct-template-4>, <http://purl.uniprot.org/unirules/MF_02231#construct-template-2>,
    <http://purl.uniprot.org/unirules/MF_02231#construct-template-17>, <http://purl.uniprot.org/unirules/MF_02231#construct-template-7>,
    <http://purl.uniprot.org/unirules/MF_02231#construct-template-10>, <http://purl.uniprot.org/unirules/MF_02231#construct-template-12>,
    <http://purl.uniprot.org/unirules/MF_02231#construct-template-13>, <http://purl.uniprot.org/unirules/MF_02231#construct-template-14>,
    <http://purl.uniprot.org/unirules/MF_02231#construct-template-11>, <http://purl.uniprot.org/unirules/MF_02231#construct-template-0>,
    <http://purl.uniprot.org/unirules/MF_02231#construct-template-6>, <http://purl.uniprot.org/unirules/MF_02231#construct-template-5>,
    <http://purl.uniprot.org/unirules/MF_02231#construct-template-23>, <http://purl.uniprot.org/unirules/MF_02231#construct-template-1>,
    <http://purl.uniprot.org/unirules/MF_02231#construct-template-22>, <http://purl.uniprot.org/unirules/MF_02231#construct-template-21>,
    <http://purl.uniprot.org/unirules/MF_02231#construct-template-16>, <http://purl.uniprot.org/unirules/MF_02231#construct-template-20>,
    <http://purl.uniprot.org/unirules/MF_02231#construct-template-18>, <http://purl.uniprot.org/unirules/MF_02231#construct-template-8>,
    <http://purl.uniprot.org/unirules/MF_02231#construct-template-15>, <http://purl.uniprot.org/unirules/MF_02231#construct-template-9>,
    <http://purl.uniprot.org/unirules/MF_02231#construct-template-19>;
  <http://www.w3.org/ns/shacl#prefixes> <http://purl.uniprot.org/unirules/>;
  <http://spinrdf.org/sp#where> <http://purl.uniprot.org/unirules/MF_02231#construct-where-list-0>;
  <http://spinrdf.org/sp#templates> <http://purl.uniprot.org/unirules/MF_02231#construct-template-list-0>;
  <http://www.w3.org/ns/shacl#construct> """CONSTRUCT {
  _:770821 up:source unirule:MF_02231 .
  _:770822 up:source unirule:MF_02231 .
  _:770823 up:source unirule:MF_02231 .
  _:770824 up:source unirule:MF_02231 .
  _:770825 up:source unirule:MF_02231 .
  _:770826 up:source unirule:MF_02231 .
  ?this up:annotation ?annotation2 ,
      ?annotation3 ;
    up:classifiedWith GO:0006744 ,
      keyword:831 ;
    up:recommendedName ?name0 .
  ?name0 up:fullName 'Ubiquinone biosynthesis accessory factor UbiT' ;
    rdf:type up:Structured_Name .
  ?gene1 skos:prefLabel 'ubiT' .
  ?annotation2 a up:Pathway_Annotation ;
    rdfs:comment 'Cofactor biosynthesis; ubiquinone biosynthesis.' .
  ?annotation3 a up:Similarity_Annotation ;
    rdfs:comment 'Belongs to the UbiT family.' .
  _:770827 a rdf:Statement ;
    up:attribution _:770821 ;
    rdf:subject ?this ;
    rdf:predicate up:recommendedName ;
    rdf:object ?name0 .
  _:770828 a rdf:Statement ;
    up:attribution _:770822 ;
    rdf:subject ?gene1 ;
    rdf:predicate up:encodedBy ;
    rdf:object ?gene1 .
  _:770829 a rdf:Statement ;
    up:attribution _:770823 ;
    rdf:subject ?this ;
    rdf:predicate up:annotation ;
    rdf:object ?annotation2 .
  _:770830 a rdf:Statement ;
    up:attribution _:770824 ;
    rdf:subject ?this ;
    rdf:predicate up:annotation ;
    rdf:object ?annotation3 .
  _:770831 a rdf:Statement ;
    up:attribution _:770825 ;
    rdf:subject ?this ;
    rdf:predicate up:classifiedWith ;
    rdf:object keyword:831 .
  _:770832 a rdf:Statement ;
    up:attribution _:770826 ;
    rdf:subject ?this ;
    rdf:predicate up:classifiedWith ;
    rdf:object GO:0006744 .
}
WHERE {
  #baseURI: http://purl.uniprot.org/unirule/MF_02231
  #Rule MF_02231 Created by:? on:2019-10-01 Modified by:Catherine Rivoire on:2025-04-08
  ?this up:organism ?thisOrganism ;
    rdfs:seeAlso signature:MF_02231 .
  ?thisOrganism rdfs:subClassOf+ taxon:1224 .
  BIND(URI(CONCAT(STR(?this), '#MF_02231a0')) AS ?name0) .
  BIND(URI(CONCAT(STR(?this), '#MF_02231a2')) AS ?annotation2) .
  BIND(URI(CONCAT(STR(?this), '#MF_02231a3')) AS ?annotation3) .
  OPTIONAL {
    ?this a up:Protein .
    ?this up:organism ?thisOrganism .
    ?thisOrganism rdfs:subClassOf+ taxon:91347 .
    BIND(?this AS ?case4) .
  }
  OPTIONAL {
    ?this a up:Protein .
    ?this up:organism ?thisOrganism .
    FILTER (! (EXISTS {
      ?thisOrganism rdfs:subClassOf+ taxon:91347 .
    })) .
    BIND(?this AS ?case5) .
  }
}
""" .

<http://purl.uniprot.org/unirules/MF_02231> <http://www.w3.org/ns/shacl#rule> <http://purl.uniprot.org/unirules/MF_02231#construct> .