CONSTRUCT { _:852390 up:source unirule:MF_03161 . _:852391 up:source unirule:MF_03161 . _:852392 up:source unirule:MF_03161 . _:852393 up:source unirule:MF_03161 . _:852394 up:source unirule:MF_03161 . _:852395 up:source unirule:MF_03161 . _:852396 up:source unirule:MF_03161 . _:852397 up:source unirule:MF_03161 . _:852398 up:source unirule:MF_03161 . _:852399 up:source unirule:MF_03161 . _:852400 up:source unirule:MF_03161 . _:852401 up:source unirule:MF_03161 . _:852402 up:source unirule:MF_03161 . _:852403 up:source unirule:MF_03161 . _:852404 up:source unirule:MF_03161 . _:852405 up:source unirule:MF_03161 . _:852406 up:source unirule:MF_03161 . _:852407 up:source unirule:MF_03161 . _:852408 up:source unirule:MF_03161 . _:852409 up:source unirule:MF_03161 . _:852410 up:source unirule:MF_03161 . _:852411 up:source unirule:MF_03161 . _:852412 up:source unirule:MF_03161 . _:852413 up:source unirule:MF_03161 . _:852414 up:source unirule:MF_03161 . _:852415 up:source unirule:MF_03161 . _:852416 up:source unirule:MF_03161 . _:852417 up:source unirule:MF_03161 . _:852418 up:source unirule:MF_03161 . _:852419 up:source unirule:MF_03161 . _:852420 up:source unirule:MF_03161 . _:852421 up:source unirule:MF_03161 . _:852422 up:source unirule:MF_03161 . _:852423 up:source unirule:MF_03161 . _:852424 up:source unirule:MF_03161 . _:852425 up:source unirule:MF_03161 . _:852426 up:source unirule:MF_03161 . ?this up:annotation ?annotation0 , ?annotation2 , ?annotation4 ; up:classifiedWith GO:0005759 , GO:0006476 , GO:0034979 , GO:0070403 , keyword:479 , keyword:496 , keyword:520 , keyword:808 . ?annotation0 up:activity ?activity1 ; rdf:type up:Catalytic_Activity_Annotation . ?activity1 up:catalyticActivity <http://rdf.rhea-db.org/43636>; up:enzymeClass <http://purl.uniprot.org/enzyme/2.3.1.286>. ?annotation2 a up:Subcellular_Location_Annotation . ?annotation2li3 up:cellularComponent <http://purl.uniprot.org/locations/null>. ?annotation4 a up:Similarity_Annotation ; rdfs:comment 'Belongs to the sirtuin family. Class II subfamily.' . ?case5 up:classifiedWith GO:0008270 , keyword:479 , keyword:862 . ?case6 up:alternativeName ?name8 , ?name9 , ?name10 , ?name11 , ?name12 ; up:classifiedWith GO:0003950 , keyword:809 ; up:precursor "true"^^xsd:boolean ; up:recommendedName ?name7 . ?name7 up:ecName '2.3.1.-' ; up:fullName 'NAD-dependent protein lipoamidase sirtuin-4, mitochondrial' ; rdf:type up:Structured_Name . ?name8 up:ecName '2.4.2.-' ; up:fullName 'NAD-dependent ADP-ribosyltransferase sirtuin-4' ; rdf:type up:Structured_Name . ?name9 up:ecName '2.3.1.-' ; up:fullName 'NAD-dependent protein biotinylase sirtuin-4' ; rdf:type up:Structured_Name . ?name10 up:ecName '2.3.1.286' ; up:fullName 'NAD-dependent protein deacetylase sirtuin-4' ; rdf:type up:Structured_Name . ?name11 up:fullName 'Regulatory protein SIR2 homolog 4' ; rdf:type up:Structured_Name . ?name12 up:fullName 'SIR2-like protein 4' ; rdf:type up:Structured_Name . ?case13 up:alternativeName ?name15 ; up:recommendedName ?name14 . ?name14 up:ecName '2.3.1.-' ; up:fullName 'NAD-dependent protein deacylase' ; rdf:type up:Structured_Name . ?name15 up:fullName 'Regulatory protein SIR2 homolog' ; rdf:type up:Structured_Name . ?pfs16 up:annotation ?annotation17 , ?annotation23 , ?annotation29 , ?annotation35 . ?annotation17 faldo:begin ?pfsb18 ; faldo:end ?pfse19 ; up:ligand ?ligand20 ; rdf:type up:Binding_Site_Annotation . ?pfsb18 faldo:position ?thisPositionOn21 ; rdf:type faldo:ExactPosition . ?pfse19 faldo:position ?thisPositionOn22 ; rdf:type faldo:ExactPosition . ?ligand20 rdfs:subClassOf chebi:29105 . ?annotation23 faldo:begin ?pfsb24 ; faldo:end ?pfse25 ; up:ligand ?ligand26 ; rdf:type up:Binding_Site_Annotation . ?pfsb24 faldo:position ?thisPositionOn27 ; rdf:type faldo:ExactPosition . ?pfse25 faldo:position ?thisPositionOn28 ; rdf:type faldo:ExactPosition . ?ligand26 rdfs:subClassOf chebi:29105 . ?annotation29 faldo:begin ?pfsb30 ; faldo:end ?pfse31 ; up:ligand ?ligand32 ; rdf:type up:Binding_Site_Annotation . ?pfsb30 faldo:position ?thisPositionOn33 ; rdf:type faldo:ExactPosition . ?pfse31 faldo:position ?thisPositionOn34 ; rdf:type faldo:ExactPosition . ?ligand32 rdfs:subClassOf chebi:29105 . ?annotation35 faldo:begin ?pfsb36 ; faldo:end ?pfse37 ; up:ligand ?ligand38 ; rdf:type up:Binding_Site_Annotation . ?pfsb36 faldo:position ?thisPositionOn39 ; rdf:type faldo:ExactPosition . ?pfse37 faldo:position ?thisPositionOn40 ; rdf:type faldo:ExactPosition . ?ligand38 rdfs:subClassOf chebi:29105 . ?pfs41 up:annotation ?annotation42 . ?annotation42 faldo:begin ?pfsb43 ; faldo:end ?pfse44 ; up:ligand ?ligand45 ; rdf:type up:Binding_Site_Annotation . ?pfsb43 faldo:position ?thisPositionOn46 ; rdf:type faldo:ExactPosition . ?pfse44 faldo:position ?thisPositionOn47 ; rdf:type faldo:ExactPosition . ?ligand45 rdfs:subClassOf chebi:57540 . ?pfs48 up:annotation ?annotation49 . ?annotation49 faldo:begin ?pfsb50 ; faldo:end ?pfse51 ; up:ligand ?ligand52 ; rdf:type up:Binding_Site_Annotation . ?pfsb50 faldo:position ?thisPositionOn53 ; rdf:type faldo:ExactPosition . ?pfse51 faldo:position ?thisPositionOn54 ; rdf:type faldo:ExactPosition . ?ligand52 rdfs:subClassOf chebi:57540 . ?pfs55 up:annotation ?annotation56 . ?annotation56 faldo:begin ?pfsb57 ; faldo:end ?pfse58 ; up:ligand ?ligand59 ; rdf:type up:Binding_Site_Annotation . ?pfsb57 faldo:position ?thisPositionOn60 ; rdf:type faldo:ExactPosition . ?pfse58 faldo:position ?thisPositionOn61 ; rdf:type faldo:ExactPosition . ?ligand59 rdfs:subClassOf chebi:57540 . ?pfs62 up:annotation ?annotation63 . ?annotation63 faldo:begin ?pfsb64 ; faldo:end ?pfse65 ; up:ligand ?ligand66 ; rdf:type up:Binding_Site_Annotation . ?pfsb64 faldo:position ?thisPositionOn67 ; rdf:type faldo:ExactPosition . ?pfse65 faldo:position ?thisPositionOn68 ; rdf:type faldo:ExactPosition . ?ligand66 rdfs:subClassOf chebi:57540 . ?pfs69 up:annotation ?annotation70 . ?annotation70 faldo:begin ?pfsb71 ; faldo:end ?pfse72 ; up:ligand ?ligand73 ; rdf:type up:Binding_Site_Annotation . ?pfsb71 faldo:position ?thisPositionOn74 ; rdf:type faldo:ExactPosition . ?pfse72 faldo:position ?thisPositionOn75 ; rdf:type faldo:ExactPosition . ?ligand73 rdfs:subClassOf chebi:57540 . ?pfs76 up:annotation ?annotation77 . ?annotation77 faldo:begin ?pfsb78 ; faldo:end ?pfse79 ; rdf:type up:Active_Site_Annotation ; rdfs:comment 'Proton acceptor' . ?pfsb78 faldo:position ?thisPositionOn80 ; rdf:type faldo:ExactPosition . ?pfse79 faldo:position ?thisPositionOn81 ; rdf:type faldo:ExactPosition . ?pfs82 up:annotation ?annotation83 . ?annotation83 faldo:begin ?pfsb84 ; faldo:end ?pfse85 ; rdf:type up:Transit_Peptide_Annotation ; rdfs:comment 'Mitochondrion' . ?pfsb84 faldo:position ?thisPositionOn86 ; rdf:type faldo:ExactPosition . ?pfse85 faldo:position ?thisPositionOn87 ; rdf:type faldo:ExactPosition . ?pfs88 up:annotation ?annotation89 . ?annotation89 faldo:begin ?pfsb90 ; faldo:end ?pfse91 ; rdf:type up:Chain_Annotation ; rdfs:comment '@PROTEIN_NAME@' . ?pfsb90 faldo:position ?thisPositionOn92 ; rdf:type faldo:ExactPosition . ?pfse91 faldo:position ?thisPositionOn93 ; rdf:type faldo:ExactPosition . _:852427 a rdf:Statement ; up:attribution _:852390 ; rdf:subject ?this ; rdf:predicate up:annotation ; rdf:object ?annotation0 . _:852428 a rdf:Statement ; up:attribution _:852391 ; rdf:subject ?this ; rdf:predicate up:annotation ; rdf:object ?annotation2 . _:852429 a rdf:Statement ; up:attribution _:852392 ; rdf:subject ?this ; rdf:predicate up:annotation ; rdf:object ?annotation4 . _:852430 a rdf:Statement ; up:attribution _:852393 ; rdf:subject ?this ; rdf:predicate up:classifiedWith ; rdf:object keyword:479 . _:852431 a rdf:Statement ; up:attribution _:852394 ; rdf:subject ?this ; rdf:predicate up:classifiedWith ; rdf:object keyword:496 . _:852432 a rdf:Statement ; up:attribution _:852395 ; rdf:subject ?this ; rdf:predicate up:classifiedWith ; rdf:object keyword:520 . _:852433 a rdf:Statement ; up:attribution _:852396 ; rdf:subject ?this ; rdf:predicate up:classifiedWith ; rdf:object keyword:808 . _:852434 a rdf:Statement ; up:attribution _:852397 ; rdf:subject ?this ; rdf:predicate up:classifiedWith ; rdf:object GO:0005759 . _:852435 a rdf:Statement ; up:attribution _:852398 ; rdf:subject ?this ; rdf:predicate up:classifiedWith ; rdf:object GO:0034979 . _:852436 a rdf:Statement ; up:attribution _:852399 ; rdf:subject ?this ; rdf:predicate up:classifiedWith ; rdf:object GO:0070403 . _:852437 a rdf:Statement ; up:attribution _:852400 ; rdf:subject ?this ; rdf:predicate up:classifiedWith ; rdf:object GO:0006476 . _:852438 a rdf:Statement ; up:attribution _:852401 ; rdf:subject ?case5 ; rdf:predicate up:classifiedWith ; rdf:object keyword:479 . _:852439 a rdf:Statement ; up:attribution _:852402 ; rdf:subject ?case5 ; rdf:predicate up:classifiedWith ; rdf:object keyword:862 . _:852440 a rdf:Statement ; up:attribution _:852403 ; rdf:subject ?case5 ; rdf:predicate up:classifiedWith ; rdf:object GO:0008270 . _:852441 a rdf:Statement ; up:attribution _:852404 ; rdf:subject ?case6 ; rdf:predicate up:recommendedName ; rdf:object ?name7 . _:852442 a rdf:Statement ; up:attribution _:852405 ; rdf:subject ?case6 ; rdf:predicate up:alternativeName ; rdf:object ?name8 . _:852443 a rdf:Statement ; up:attribution _:852406 ; rdf:subject ?case6 ; rdf:predicate up:alternativeName ; rdf:object ?name9 . _:852444 a rdf:Statement ; up:attribution _:852407 ; rdf:subject ?case6 ; rdf:predicate up:alternativeName ; rdf:object ?name10 . _:852445 a rdf:Statement ; up:attribution _:852408 ; rdf:subject ?case6 ; rdf:predicate up:alternativeName ; rdf:object ?name11 . _:852446 a rdf:Statement ; up:attribution _:852409 ; rdf:subject ?case6 ; rdf:predicate up:alternativeName ; rdf:object ?name12 . _:852447 a rdf:Statement ; up:attribution _:852410 ; rdf:subject ?case6 ; rdf:predicate up:precursor ; rdf:object "true"^^xsd:boolean . _:852448 a rdf:Statement ; up:attribution _:852411 ; rdf:subject ?case6 ; rdf:predicate up:classifiedWith ; rdf:object keyword:809 . _:852449 a rdf:Statement ; up:attribution _:852412 ; rdf:subject ?case6 ; rdf:predicate up:classifiedWith ; rdf:object GO:0003950 . _:852450 a rdf:Statement ; up:attribution _:852413 ; rdf:subject ?case13 ; rdf:predicate up:recommendedName ; rdf:object ?name14 . _:852451 a rdf:Statement ; up:attribution _:852414 ; rdf:subject ?case13 ; rdf:predicate up:alternativeName ; rdf:object ?name15 . _:852452 a rdf:Statement ; up:source unirule:MF_03161 ; rdf:subject ?pfs16 ; rdf:predicate up:annotation ; rdf:object ?annotation17 . _:852453 a rdf:Statement ; up:attribution _:852415 ; rdf:subject ?pfs16 ; rdf:predicate up:annotation ; rdf:object ?annotation17 . _:852454 a rdf:Statement ; up:source unirule:MF_03161 ; rdf:subject ?pfs16 ; rdf:predicate up:annotation ; rdf:object ?annotation23 . _:852455 a rdf:Statement ; up:attribution _:852416 ; rdf:subject ?pfs16 ; rdf:predicate up:annotation ; rdf:object ?annotation23 . _:852456 a rdf:Statement ; up:source unirule:MF_03161 ; rdf:subject ?pfs16 ; rdf:predicate up:annotation ; rdf:object ?annotation29 . _:852457 a rdf:Statement ; up:attribution _:852417 ; rdf:subject ?pfs16 ; rdf:predicate up:annotation ; rdf:object ?annotation29 . _:852458 a rdf:Statement ; up:source unirule:MF_03161 ; rdf:subject ?pfs16 ; rdf:predicate up:annotation ; rdf:object ?annotation35 . _:852459 a rdf:Statement ; up:attribution _:852418 ; rdf:subject ?pfs16 ; rdf:predicate up:annotation ; rdf:object ?annotation35 . _:852460 a rdf:Statement ; up:source unirule:MF_03161 ; rdf:subject ?pfs41 ; rdf:predicate up:annotation ; rdf:object ?annotation42 . _:852461 a rdf:Statement ; up:attribution _:852419 ; rdf:subject ?pfs41 ; rdf:predicate up:annotation ; rdf:object ?annotation42 . _:852462 a rdf:Statement ; up:source unirule:MF_03161 ; rdf:subject ?pfs48 ; rdf:predicate up:annotation ; rdf:object ?annotation49 . _:852463 a rdf:Statement ; up:attribution _:852420 ; rdf:subject ?pfs48 ; rdf:predicate up:annotation ; rdf:object ?annotation49 . _:852464 a rdf:Statement ; up:source unirule:MF_03161 ; rdf:subject ?pfs55 ; rdf:predicate up:annotation ; rdf:object ?annotation56 . _:852465 a rdf:Statement ; up:attribution _:852421 ; rdf:subject ?pfs55 ; rdf:predicate up:annotation ; rdf:object ?annotation56 . _:852466 a rdf:Statement ; up:source unirule:MF_03161 ; rdf:subject ?pfs62 ; rdf:predicate up:annotation ; rdf:object ?annotation63 . _:852467 a rdf:Statement ; up:attribution _:852422 ; rdf:subject ?pfs62 ; rdf:predicate up:annotation ; rdf:object ?annotation63 . _:852468 a rdf:Statement ; up:source unirule:MF_03161 ; rdf:subject ?pfs69 ; rdf:predicate up:annotation ; rdf:object ?annotation70 . _:852469 a rdf:Statement ; up:attribution _:852423 ; rdf:subject ?pfs69 ; rdf:predicate up:annotation ; rdf:object ?annotation70 . _:852470 a rdf:Statement ; up:source unirule:MF_03161 ; rdf:subject ?pfs76 ; rdf:predicate up:annotation ; rdf:object ?annotation77 . _:852471 a rdf:Statement ; up:attribution _:852424 ; rdf:subject ?pfs76 ; rdf:predicate up:annotation ; rdf:object ?annotation77 . _:852472 a rdf:Statement ; up:source unirule:MF_03161 ; rdf:subject ?pfs82 ; rdf:predicate up:annotation ; rdf:object ?annotation83 . _:852473 a rdf:Statement ; up:attribution _:852425 ; rdf:subject ?pfs82 ; rdf:predicate up:annotation ; rdf:object ?annotation83 . _:852474 a rdf:Statement ; up:source unirule:MF_03161 ; rdf:subject ?pfs88 ; rdf:predicate up:annotation ; rdf:object ?annotation89 . _:852475 a rdf:Statement ; up:attribution _:852426 ; rdf:subject ?pfs88 ; rdf:predicate up:annotation ; rdf:object ?annotation89 . } WHERE { #baseURI: http://purl.uniprot.org/unirule/MF_03161 #Rule MF_03161 Created by:? on:2012-08-22 Modified by:Catherine Rivoire on:2025-03-21 ?this up:organism ?thisOrganism ; rdfs:seeAlso signature:MF_01967 . ?thisOrganism rdfs:subClassOf+ taxon:2759 . BIND(URI(CONCAT(STR(?this), '#MF_03161a0')) AS ?annotation0) . BIND(URI(CONCAT(STR(?this), '#MF_03161a2')) AS ?annotation2) . BIND(URI(CONCAT(STR(?this), '#MF_03161a4')) AS ?annotation4) . OPTIONAL { ?this up:sequence ?thisSequence . ?thisSequence rdf:value ?thisSequenceValue . ?templateMotifMatch98 faldo:location ?templateMotifSequenceMatchRegionQ9Y6E799 ; edam:is_output_of ?templateMotifSequenceProfileAlignmentOperationQ9Y6E7101 ; rdf:type edam:data_0869 ; rdf:value ?templateMotifCigarQ9Y6E7MF_0196794 . ?templateMotifSequenceMatchRegionQ9Y6E799 faldo:begin ?templateMotifSequenceMatchBeginQ9Y6E7100 . ?templateMotifSequenceMatchBeginQ9Y6E7100 faldo:position ?templateMotifSequenceMatchBeginPositionQ9Y6E795 ; faldo:reference isoform:Q9Y6E7-1 . ?templateMotifSequenceProfileAlignmentOperationQ9Y6E7101 edam:has_input signature:MF_01967 ; rdf:type edam:operation_0300 . ?targetMotifMatch102 faldo:location ?targetMotifMatchRegionMatch103 ; edam:is_output_of ?targetMotifSequenceAlignmentOperationMF_01967105 ; rdf:type edam:data_0869 ; rdf:value ?targetMotifMatchCigarQ9Y6E7MF_0196796 . ?targetMotifMatchRegionMatch103 faldo:begin ?targetMotifMatchRegionMatchBeginMF_01967104 . ?targetMotifMatchRegionMatchBeginMF_01967104 faldo:position ?targetMotifMatchRegionMatchBeginPositionMF_0196797 ; faldo:reference ?thisSequence . ?targetMotifSequenceAlignmentOperationMF_01967105 edam:has_input signature:MF_01967 ; rdf:type edam:operation_0300 . BIND(?this AS ?tagFTGRP_1) . BIND(STRLEN(REPLACE(SUBSTR(?templateMotifCigarQ9Y6E7MF_0196794, 1, (STRLEN(?templateMotifCigarQ9Y6E7MF_0196794) - STRLEN(REPLACE(?templateMotifCigarQ9Y6E7MF_0196794, CONCAT('^(?:-*[^-]){', STR(((169 - ?templateMotifSequenceMatchBeginPositionQ9Y6E795) + 1)), '}'), '')))), '[a-z]', '')) AS ?step1106) . BIND((STRLEN(SUBSTR(?targetMotifMatchCigarQ9Y6E7MF_0196796, 1, (STRLEN(?targetMotifMatchCigarQ9Y6E7MF_0196796) - STRLEN(REPLACE(?targetMotifMatchCigarQ9Y6E7MF_0196796, CONCAT('^(?:[a-z]*(?:[A-Z]|-)){', STR(?step1106), '}'), ''))))) - STRLEN(REPLACE(SUBSTR(?targetMotifMatchCigarQ9Y6E7MF_0196796, 1, (STRLEN(?targetMotifMatchCigarQ9Y6E7MF_0196796) - STRLEN(REPLACE(?targetMotifMatchCigarQ9Y6E7MF_0196796, CONCAT('^(?:[a-z]*(?:[A-Z]|-)){', STR(?step1106), '}'), '')))), '[^-]', ''))) AS ?step2107) . BIND(((?step2107 + ?targetMotifMatchRegionMatchBeginPositionMF_0196797) - 1) AS ?thisPositionOn21) . BIND(?thisPositionOn21 AS ?thisPositionOn22) . BIND(?this AS ?pfs1t108) . BIND(URI(CONCAT(STR(?thisSequence), '#position', STR(?thisPositionOn21))) AS ?pfsb18) . BIND(URI(CONCAT(STR(?thisSequence), '#position', STR(?thisPositionOn22))) AS ?pfse19) . FILTER ((SUBSTR(?thisSequenceValue, ?thisPositionOn21, 1) = 'C')) . BIND(STRLEN(REPLACE(SUBSTR(?templateMotifCigarQ9Y6E7MF_0196794, 1, (STRLEN(?templateMotifCigarQ9Y6E7MF_0196794) - STRLEN(REPLACE(?templateMotifCigarQ9Y6E7MF_0196794, CONCAT('^(?:-*[^-]){', STR(((172 - ?templateMotifSequenceMatchBeginPositionQ9Y6E795) + 1)), '}'), '')))), '[a-z]', '')) AS ?step1109) . BIND((STRLEN(SUBSTR(?targetMotifMatchCigarQ9Y6E7MF_0196796, 1, (STRLEN(?targetMotifMatchCigarQ9Y6E7MF_0196796) - STRLEN(REPLACE(?targetMotifMatchCigarQ9Y6E7MF_0196796, CONCAT('^(?:[a-z]*(?:[A-Z]|-)){', STR(?step1109), '}'), ''))))) - STRLEN(REPLACE(SUBSTR(?targetMotifMatchCigarQ9Y6E7MF_0196796, 1, (STRLEN(?targetMotifMatchCigarQ9Y6E7MF_0196796) - STRLEN(REPLACE(?targetMotifMatchCigarQ9Y6E7MF_0196796, CONCAT('^(?:[a-z]*(?:[A-Z]|-)){', STR(?step1109), '}'), '')))), '[^-]', ''))) AS ?step2110) . BIND(((?step2110 + ?targetMotifMatchRegionMatchBeginPositionMF_0196797) - 1) AS ?thisPositionOn27) . BIND(?thisPositionOn27 AS ?thisPositionOn28) . BIND(?this AS ?pfs1t111) . BIND(URI(CONCAT(STR(?thisSequence), '#position', STR(?thisPositionOn27))) AS ?pfsb24) . BIND(URI(CONCAT(STR(?thisSequence), '#position', STR(?thisPositionOn28))) AS ?pfse25) . FILTER ((SUBSTR(?thisSequenceValue, ?thisPositionOn27, 1) = 'C')) . BIND(STRLEN(REPLACE(SUBSTR(?templateMotifCigarQ9Y6E7MF_0196794, 1, (STRLEN(?templateMotifCigarQ9Y6E7MF_0196794) - STRLEN(REPLACE(?templateMotifCigarQ9Y6E7MF_0196794, CONCAT('^(?:-*[^-]){', STR(((220 - ?templateMotifSequenceMatchBeginPositionQ9Y6E795) + 1)), '}'), '')))), '[a-z]', '')) AS ?step1112) . BIND((STRLEN(SUBSTR(?targetMotifMatchCigarQ9Y6E7MF_0196796, 1, (STRLEN(?targetMotifMatchCigarQ9Y6E7MF_0196796) - STRLEN(REPLACE(?targetMotifMatchCigarQ9Y6E7MF_0196796, CONCAT('^(?:[a-z]*(?:[A-Z]|-)){', STR(?step1112), '}'), ''))))) - STRLEN(REPLACE(SUBSTR(?targetMotifMatchCigarQ9Y6E7MF_0196796, 1, (STRLEN(?targetMotifMatchCigarQ9Y6E7MF_0196796) - STRLEN(REPLACE(?targetMotifMatchCigarQ9Y6E7MF_0196796, CONCAT('^(?:[a-z]*(?:[A-Z]|-)){', STR(?step1112), '}'), '')))), '[^-]', ''))) AS ?step2113) . BIND(((?step2113 + ?targetMotifMatchRegionMatchBeginPositionMF_0196797) - 1) AS ?thisPositionOn33) . BIND(?thisPositionOn33 AS ?thisPositionOn34) . BIND(?this AS ?pfs1t114) . BIND(URI(CONCAT(STR(?thisSequence), '#position', STR(?thisPositionOn33))) AS ?pfsb30) . BIND(URI(CONCAT(STR(?thisSequence), '#position', STR(?thisPositionOn34))) AS ?pfse31) . FILTER ((SUBSTR(?thisSequenceValue, ?thisPositionOn33, 1) = 'C')) . BIND(STRLEN(REPLACE(SUBSTR(?templateMotifCigarQ9Y6E7MF_0196794, 1, (STRLEN(?templateMotifCigarQ9Y6E7MF_0196794) - STRLEN(REPLACE(?templateMotifCigarQ9Y6E7MF_0196794, CONCAT('^(?:-*[^-]){', STR(((223 - ?templateMotifSequenceMatchBeginPositionQ9Y6E795) + 1)), '}'), '')))), '[a-z]', '')) AS ?step1115) . BIND((STRLEN(SUBSTR(?targetMotifMatchCigarQ9Y6E7MF_0196796, 1, (STRLEN(?targetMotifMatchCigarQ9Y6E7MF_0196796) - STRLEN(REPLACE(?targetMotifMatchCigarQ9Y6E7MF_0196796, CONCAT('^(?:[a-z]*(?:[A-Z]|-)){', STR(?step1115), '}'), ''))))) - STRLEN(REPLACE(SUBSTR(?targetMotifMatchCigarQ9Y6E7MF_0196796, 1, (STRLEN(?targetMotifMatchCigarQ9Y6E7MF_0196796) - STRLEN(REPLACE(?targetMotifMatchCigarQ9Y6E7MF_0196796, CONCAT('^(?:[a-z]*(?:[A-Z]|-)){', STR(?step1115), '}'), '')))), '[^-]', ''))) AS ?step2116) . BIND(((?step2116 + ?targetMotifMatchRegionMatchBeginPositionMF_0196797) - 1) AS ?thisPositionOn39) . BIND(?thisPositionOn39 AS ?thisPositionOn40) . BIND(?this AS ?pfs1t117) . BIND(URI(CONCAT(STR(?thisSequence), '#position', STR(?thisPositionOn39))) AS ?pfsb36) . BIND(URI(CONCAT(STR(?thisSequence), '#position', STR(?thisPositionOn40))) AS ?pfse37) . FILTER ((SUBSTR(?thisSequenceValue, ?thisPositionOn39, 1) = 'C')) . BIND(?this AS ?pfs16) . } OPTIONAL { ?this up:sequence ?thisSequence . ?thisSequence rdf:value ?thisSequenceValue . ?templateMotifMatch122 faldo:location ?templateMotifSequenceMatchRegionQ9Y6E7123 ; edam:is_output_of ?templateMotifSequenceProfileAlignmentOperationQ9Y6E7125 ; rdf:type edam:data_0869 ; rdf:value ?templateMotifCigarQ9Y6E7MF_01967118 . ?templateMotifSequenceMatchRegionQ9Y6E7123 faldo:begin ?templateMotifSequenceMatchBeginQ9Y6E7124 . ?templateMotifSequenceMatchBeginQ9Y6E7124 faldo:position ?templateMotifSequenceMatchBeginPositionQ9Y6E7119 ; faldo:reference isoform:Q9Y6E7-1 . ?templateMotifSequenceProfileAlignmentOperationQ9Y6E7125 edam:has_input signature:MF_01967 ; rdf:type edam:operation_0300 . ?targetMotifMatch126 faldo:location ?targetMotifMatchRegionMatch127 ; edam:is_output_of ?targetMotifSequenceAlignmentOperationMF_01967129 ; rdf:type edam:data_0869 ; rdf:value ?targetMotifMatchCigarQ9Y6E7MF_01967120 . ?targetMotifMatchRegionMatch127 faldo:begin ?targetMotifMatchRegionMatchBeginMF_01967128 . ?targetMotifMatchRegionMatchBeginMF_01967128 faldo:position ?targetMotifMatchRegionMatchBeginPositionMF_01967121 ; faldo:reference ?thisSequence . ?targetMotifSequenceAlignmentOperationMF_01967129 edam:has_input signature:MF_01967 ; rdf:type edam:operation_0300 . BIND(STRLEN(REPLACE(SUBSTR(?templateMotifCigarQ9Y6E7MF_01967118, 1, (STRLEN(?templateMotifCigarQ9Y6E7MF_01967118) - STRLEN(REPLACE(?templateMotifCigarQ9Y6E7MF_01967118, CONCAT('^(?:-*[^-]){', STR(((304 - ?templateMotifSequenceMatchBeginPositionQ9Y6E7119) + 1)), '}'), '')))), '[a-z]', '')) AS ?step1130) . BIND((STRLEN(SUBSTR(?targetMotifMatchCigarQ9Y6E7MF_01967120, 1, (STRLEN(?targetMotifMatchCigarQ9Y6E7MF_01967120) - STRLEN(REPLACE(?targetMotifMatchCigarQ9Y6E7MF_01967120, CONCAT('^(?:[a-z]*(?:[A-Z]|-)){', STR(?step1130), '}'), ''))))) - STRLEN(REPLACE(SUBSTR(?targetMotifMatchCigarQ9Y6E7MF_01967120, 1, (STRLEN(?targetMotifMatchCigarQ9Y6E7MF_01967120) - STRLEN(REPLACE(?targetMotifMatchCigarQ9Y6E7MF_01967120, CONCAT('^(?:[a-z]*(?:[A-Z]|-)){', STR(?step1130), '}'), '')))), '[^-]', ''))) AS ?step2131) . BIND(((?step2131 + ?targetMotifMatchRegionMatchBeginPositionMF_01967121) - 1) AS ?thisPositionOn46) . BIND(?thisPositionOn46 AS ?thisPositionOn47) . BIND(?this AS ?pfs2t132) . BIND(URI(CONCAT(STR(?thisSequence), '#position', STR(?thisPositionOn46))) AS ?pfsb43) . BIND(URI(CONCAT(STR(?thisSequence), '#position', STR(?thisPositionOn47))) AS ?pfse44) . FILTER (BOUND(?thisPositionOn46)) . BIND(URI(CONCAT(STR(?this), '#MF_03161a42')) AS ?annotation42) . BIND(?this AS ?pfs41) . } OPTIONAL { ?this up:sequence ?thisSequence . ?thisSequence rdf:value ?thisSequenceValue . ?templateMotifMatch137 faldo:location ?templateMotifSequenceMatchRegionQ9Y6E7138 ; edam:is_output_of ?templateMotifSequenceProfileAlignmentOperationQ9Y6E7140 ; rdf:type edam:data_0869 ; rdf:value ?templateMotifCigarQ9Y6E7MF_01967133 . ?templateMotifSequenceMatchRegionQ9Y6E7138 faldo:begin ?templateMotifSequenceMatchBeginQ9Y6E7139 . ?templateMotifSequenceMatchBeginQ9Y6E7139 faldo:position ?templateMotifSequenceMatchBeginPositionQ9Y6E7134 ; faldo:reference isoform:Q9Y6E7-1 . ?templateMotifSequenceProfileAlignmentOperationQ9Y6E7140 edam:has_input signature:MF_01967 ; rdf:type edam:operation_0300 . ?targetMotifMatch141 faldo:location ?targetMotifMatchRegionMatch142 ; edam:is_output_of ?targetMotifSequenceAlignmentOperationMF_01967144 ; rdf:type edam:data_0869 ; rdf:value ?targetMotifMatchCigarQ9Y6E7MF_01967135 . ?targetMotifMatchRegionMatch142 faldo:begin ?targetMotifMatchRegionMatchBeginMF_01967143 . ?targetMotifMatchRegionMatchBeginMF_01967143 faldo:position ?targetMotifMatchRegionMatchBeginPositionMF_01967136 ; faldo:reference ?thisSequence . ?targetMotifSequenceAlignmentOperationMF_01967144 edam:has_input signature:MF_01967 ; rdf:type edam:operation_0300 . BIND(STRLEN(REPLACE(SUBSTR(?templateMotifCigarQ9Y6E7MF_01967133, 1, (STRLEN(?templateMotifCigarQ9Y6E7MF_01967133) - STRLEN(REPLACE(?templateMotifCigarQ9Y6E7MF_01967133, CONCAT('^(?:-*[^-]){', STR(((62 - ?templateMotifSequenceMatchBeginPositionQ9Y6E7134) + 1)), '}'), '')))), '[a-z]', '')) AS ?step1145) . BIND((STRLEN(SUBSTR(?targetMotifMatchCigarQ9Y6E7MF_01967135, 1, (STRLEN(?targetMotifMatchCigarQ9Y6E7MF_01967135) - STRLEN(REPLACE(?targetMotifMatchCigarQ9Y6E7MF_01967135, CONCAT('^(?:[a-z]*(?:[A-Z]|-)){', STR(?step1145), '}'), ''))))) - STRLEN(REPLACE(SUBSTR(?targetMotifMatchCigarQ9Y6E7MF_01967135, 1, (STRLEN(?targetMotifMatchCigarQ9Y6E7MF_01967135) - STRLEN(REPLACE(?targetMotifMatchCigarQ9Y6E7MF_01967135, CONCAT('^(?:[a-z]*(?:[A-Z]|-)){', STR(?step1145), '}'), '')))), '[^-]', ''))) AS ?step2146) . BIND(((?step2146 + ?targetMotifMatchRegionMatchBeginPositionMF_01967136) - 1) AS ?thisPositionOn53) . BIND(STRLEN(REPLACE(SUBSTR(?templateMotifCigarQ9Y6E7MF_01967133, 1, (STRLEN(?templateMotifCigarQ9Y6E7MF_01967133) - STRLEN(REPLACE(?templateMotifCigarQ9Y6E7MF_01967133, CONCAT('^(?:-*[^-]){', STR(((82 - ?templateMotifSequenceMatchBeginPositionQ9Y6E7134) + 1)), '}'), '')))), '[a-z]', '')) AS ?step1147) . BIND((STRLEN(SUBSTR(?targetMotifMatchCigarQ9Y6E7MF_01967135, 1, (STRLEN(?targetMotifMatchCigarQ9Y6E7MF_01967135) - STRLEN(REPLACE(?targetMotifMatchCigarQ9Y6E7MF_01967135, CONCAT('^(?:[a-z]*(?:[A-Z]|-)){', STR(?step1147), '}'), ''))))) - STRLEN(REPLACE(SUBSTR(?targetMotifMatchCigarQ9Y6E7MF_01967135, 1, (STRLEN(?targetMotifMatchCigarQ9Y6E7MF_01967135) - STRLEN(REPLACE(?targetMotifMatchCigarQ9Y6E7MF_01967135, CONCAT('^(?:[a-z]*(?:[A-Z]|-)){', STR(?step1147), '}'), '')))), '[^-]', ''))) AS ?step2148) . BIND(((?step2148 + ?targetMotifMatchRegionMatchBeginPositionMF_01967136) - 1) AS ?thisPositionOn54) . BIND(?this AS ?pfs2t149) . BIND(URI(CONCAT(STR(?thisSequence), '#position', STR(?thisPositionOn53))) AS ?pfsb50) . BIND(URI(CONCAT(STR(?thisSequence), '#position', STR(?thisPositionOn54))) AS ?pfse51) . FILTER (REGEX('GAG[ARNDCQEGHILKMFPSTWYVBZJUOX]ST[ARNDCQEGHILKMFPSTWYVBZJUOX][ARNDCQEGHILKMFPSTWYVBZJUOX]G[IV]PDYR[ARNDCQEGHILKMFPSTWYVBZJUOX]{7)', SUBSTR(?thisSequenceValue, ?thisPositionOn53, (?thisPositionOn54 - ?thisPositionOn53)))) . BIND(URI(CONCAT(STR(?this), '#MF_03161a49')) AS ?annotation49) . BIND(?this AS ?pfs48) . } OPTIONAL { ?this up:sequence ?thisSequence . ?thisSequence rdf:value ?thisSequenceValue . ?templateMotifMatch154 faldo:location ?templateMotifSequenceMatchRegionQ9Y6E7155 ; edam:is_output_of ?templateMotifSequenceProfileAlignmentOperationQ9Y6E7157 ; rdf:type edam:data_0869 ; rdf:value ?templateMotifCigarQ9Y6E7MF_01967150 . ?templateMotifSequenceMatchRegionQ9Y6E7155 faldo:begin ?templateMotifSequenceMatchBeginQ9Y6E7156 . ?templateMotifSequenceMatchBeginQ9Y6E7156 faldo:position ?templateMotifSequenceMatchBeginPositionQ9Y6E7151 ; faldo:reference isoform:Q9Y6E7-1 . ?templateMotifSequenceProfileAlignmentOperationQ9Y6E7157 edam:has_input signature:MF_01967 ; rdf:type edam:operation_0300 . ?targetMotifMatch158 faldo:location ?targetMotifMatchRegionMatch159 ; edam:is_output_of ?targetMotifSequenceAlignmentOperationMF_01967161 ; rdf:type edam:data_0869 ; rdf:value ?targetMotifMatchCigarQ9Y6E7MF_01967152 . ?targetMotifMatchRegionMatch159 faldo:begin ?targetMotifMatchRegionMatchBeginMF_01967160 . ?targetMotifMatchRegionMatchBeginMF_01967160 faldo:position ?targetMotifMatchRegionMatchBeginPositionMF_01967153 ; faldo:reference ?thisSequence . ?targetMotifSequenceAlignmentOperationMF_01967161 edam:has_input signature:MF_01967 ; rdf:type edam:operation_0300 . BIND(STRLEN(REPLACE(SUBSTR(?templateMotifCigarQ9Y6E7MF_01967150, 1, (STRLEN(?templateMotifCigarQ9Y6E7MF_01967150) - STRLEN(REPLACE(?templateMotifCigarQ9Y6E7MF_01967150, CONCAT('^(?:-*[^-]){', STR(((143 - ?templateMotifSequenceMatchBeginPositionQ9Y6E7151) + 1)), '}'), '')))), '[a-z]', '')) AS ?step1162) . BIND((STRLEN(SUBSTR(?targetMotifMatchCigarQ9Y6E7MF_01967152, 1, (STRLEN(?targetMotifMatchCigarQ9Y6E7MF_01967152) - STRLEN(REPLACE(?targetMotifMatchCigarQ9Y6E7MF_01967152, CONCAT('^(?:[a-z]*(?:[A-Z]|-)){', STR(?step1162), '}'), ''))))) - STRLEN(REPLACE(SUBSTR(?targetMotifMatchCigarQ9Y6E7MF_01967152, 1, (STRLEN(?targetMotifMatchCigarQ9Y6E7MF_01967152) - STRLEN(REPLACE(?targetMotifMatchCigarQ9Y6E7MF_01967152, CONCAT('^(?:[a-z]*(?:[A-Z]|-)){', STR(?step1162), '}'), '')))), '[^-]', ''))) AS ?step2163) . BIND(((?step2163 + ?targetMotifMatchRegionMatchBeginPositionMF_01967153) - 1) AS ?thisPositionOn60) . BIND(STRLEN(REPLACE(SUBSTR(?templateMotifCigarQ9Y6E7MF_01967150, 1, (STRLEN(?templateMotifCigarQ9Y6E7MF_01967150) - STRLEN(REPLACE(?templateMotifCigarQ9Y6E7MF_01967150, CONCAT('^(?:-*[^-]){', STR(((146 - ?templateMotifSequenceMatchBeginPositionQ9Y6E7151) + 1)), '}'), '')))), '[a-z]', '')) AS ?step1164) . BIND((STRLEN(SUBSTR(?targetMotifMatchCigarQ9Y6E7MF_01967152, 1, (STRLEN(?targetMotifMatchCigarQ9Y6E7MF_01967152) - STRLEN(REPLACE(?targetMotifMatchCigarQ9Y6E7MF_01967152, CONCAT('^(?:[a-z]*(?:[A-Z]|-)){', STR(?step1164), '}'), ''))))) - STRLEN(REPLACE(SUBSTR(?targetMotifMatchCigarQ9Y6E7MF_01967152, 1, (STRLEN(?targetMotifMatchCigarQ9Y6E7MF_01967152) - STRLEN(REPLACE(?targetMotifMatchCigarQ9Y6E7MF_01967152, CONCAT('^(?:[a-z]*(?:[A-Z]|-)){', STR(?step1164), '}'), '')))), '[^-]', ''))) AS ?step2165) . BIND(((?step2165 + ?targetMotifMatchRegionMatchBeginPositionMF_01967153) - 1) AS ?thisPositionOn61) . BIND(?this AS ?pfs2t166) . BIND(URI(CONCAT(STR(?thisSequence), '#position', STR(?thisPositionOn60))) AS ?pfsb57) . BIND(URI(CONCAT(STR(?thisSequence), '#position', STR(?thisPositionOn61))) AS ?pfse58) . FILTER ((SUBSTR(?thisSequenceValue, ?thisPositionOn60, (?thisPositionOn61 - ?thisPositionOn60)) = 'QNVD')) . BIND(URI(CONCAT(STR(?this), '#MF_03161a56')) AS ?annotation56) . BIND(?this AS ?pfs55) . } OPTIONAL { ?this up:sequence ?thisSequence . ?thisSequence rdf:value ?thisSequenceValue . ?templateMotifMatch171 faldo:location ?templateMotifSequenceMatchRegionQ9Y6E7172 ; edam:is_output_of ?templateMotifSequenceProfileAlignmentOperationQ9Y6E7174 ; rdf:type edam:data_0869 ; rdf:value ?templateMotifCigarQ9Y6E7MF_01967167 . ?templateMotifSequenceMatchRegionQ9Y6E7172 faldo:begin ?templateMotifSequenceMatchBeginQ9Y6E7173 . ?templateMotifSequenceMatchBeginQ9Y6E7173 faldo:position ?templateMotifSequenceMatchBeginPositionQ9Y6E7168 ; faldo:reference isoform:Q9Y6E7-1 . ?templateMotifSequenceProfileAlignmentOperationQ9Y6E7174 edam:has_input signature:MF_01967 ; rdf:type edam:operation_0300 . ?targetMotifMatch175 faldo:location ?targetMotifMatchRegionMatch176 ; edam:is_output_of ?targetMotifSequenceAlignmentOperationMF_01967178 ; rdf:type edam:data_0869 ; rdf:value ?targetMotifMatchCigarQ9Y6E7MF_01967169 . ?targetMotifMatchRegionMatch176 faldo:begin ?targetMotifMatchRegionMatchBeginMF_01967177 . ?targetMotifMatchRegionMatchBeginMF_01967177 faldo:position ?targetMotifMatchRegionMatchBeginPositionMF_01967170 ; faldo:reference ?thisSequence . ?targetMotifSequenceAlignmentOperationMF_01967178 edam:has_input signature:MF_01967 ; rdf:type edam:operation_0300 . BIND(STRLEN(REPLACE(SUBSTR(?templateMotifCigarQ9Y6E7MF_01967167, 1, (STRLEN(?templateMotifCigarQ9Y6E7MF_01967167) - STRLEN(REPLACE(?templateMotifCigarQ9Y6E7MF_01967167, CONCAT('^(?:-*[^-]){', STR(((260 - ?templateMotifSequenceMatchBeginPositionQ9Y6E7168) + 1)), '}'), '')))), '[a-z]', '')) AS ?step1179) . BIND((STRLEN(SUBSTR(?targetMotifMatchCigarQ9Y6E7MF_01967169, 1, (STRLEN(?targetMotifMatchCigarQ9Y6E7MF_01967169) - STRLEN(REPLACE(?targetMotifMatchCigarQ9Y6E7MF_01967169, CONCAT('^(?:[a-z]*(?:[A-Z]|-)){', STR(?step1179), '}'), ''))))) - STRLEN(REPLACE(SUBSTR(?targetMotifMatchCigarQ9Y6E7MF_01967169, 1, (STRLEN(?targetMotifMatchCigarQ9Y6E7MF_01967169) - STRLEN(REPLACE(?targetMotifMatchCigarQ9Y6E7MF_01967169, CONCAT('^(?:[a-z]*(?:[A-Z]|-)){', STR(?step1179), '}'), '')))), '[^-]', ''))) AS ?step2180) . BIND(((?step2180 + ?targetMotifMatchRegionMatchBeginPositionMF_01967170) - 1) AS ?thisPositionOn67) . BIND(STRLEN(REPLACE(SUBSTR(?templateMotifCigarQ9Y6E7MF_01967167, 1, (STRLEN(?templateMotifCigarQ9Y6E7MF_01967167) - STRLEN(REPLACE(?templateMotifCigarQ9Y6E7MF_01967167, CONCAT('^(?:-*[^-]){', STR(((262 - ?templateMotifSequenceMatchBeginPositionQ9Y6E7168) + 1)), '}'), '')))), '[a-z]', '')) AS ?step1181) . BIND((STRLEN(SUBSTR(?targetMotifMatchCigarQ9Y6E7MF_01967169, 1, (STRLEN(?targetMotifMatchCigarQ9Y6E7MF_01967169) - STRLEN(REPLACE(?targetMotifMatchCigarQ9Y6E7MF_01967169, CONCAT('^(?:[a-z]*(?:[A-Z]|-)){', STR(?step1181), '}'), ''))))) - STRLEN(REPLACE(SUBSTR(?targetMotifMatchCigarQ9Y6E7MF_01967169, 1, (STRLEN(?targetMotifMatchCigarQ9Y6E7MF_01967169) - STRLEN(REPLACE(?targetMotifMatchCigarQ9Y6E7MF_01967169, CONCAT('^(?:[a-z]*(?:[A-Z]|-)){', STR(?step1181), '}'), '')))), '[^-]', ''))) AS ?step2182) . BIND(((?step2182 + ?targetMotifMatchRegionMatchBeginPositionMF_01967170) - 1) AS ?thisPositionOn68) . BIND(?this AS ?pfs2t183) . BIND(URI(CONCAT(STR(?thisSequence), '#position', STR(?thisPositionOn67))) AS ?pfsb64) . BIND(URI(CONCAT(STR(?thisSequence), '#position', STR(?thisPositionOn68))) AS ?pfse65) . FILTER (REGEX('G[ST]S', SUBSTR(?thisSequenceValue, ?thisPositionOn67, (?thisPositionOn68 - ?thisPositionOn67)))) . BIND(URI(CONCAT(STR(?this), '#MF_03161a63')) AS ?annotation63) . BIND(?this AS ?pfs62) . } OPTIONAL { ?this up:sequence ?thisSequence . ?thisSequence rdf:value ?thisSequenceValue . ?templateMotifMatch188 faldo:location ?templateMotifSequenceMatchRegionQ9Y6E7189 ; edam:is_output_of ?templateMotifSequenceProfileAlignmentOperationQ9Y6E7191 ; rdf:type edam:data_0869 ; rdf:value ?templateMotifCigarQ9Y6E7MF_01967184 . ?templateMotifSequenceMatchRegionQ9Y6E7189 faldo:begin ?templateMotifSequenceMatchBeginQ9Y6E7190 . ?templateMotifSequenceMatchBeginQ9Y6E7190 faldo:position ?templateMotifSequenceMatchBeginPositionQ9Y6E7185 ; faldo:reference isoform:Q9Y6E7-1 . ?templateMotifSequenceProfileAlignmentOperationQ9Y6E7191 edam:has_input signature:MF_01967 ; rdf:type edam:operation_0300 . ?targetMotifMatch192 faldo:location ?targetMotifMatchRegionMatch193 ; edam:is_output_of ?targetMotifSequenceAlignmentOperationMF_01967195 ; rdf:type edam:data_0869 ; rdf:value ?targetMotifMatchCigarQ9Y6E7MF_01967186 . ?targetMotifMatchRegionMatch193 faldo:begin ?targetMotifMatchRegionMatchBeginMF_01967194 . ?targetMotifMatchRegionMatchBeginMF_01967194 faldo:position ?targetMotifMatchRegionMatchBeginPositionMF_01967187 ; faldo:reference ?thisSequence . ?targetMotifSequenceAlignmentOperationMF_01967195 edam:has_input signature:MF_01967 ; rdf:type edam:operation_0300 . BIND(STRLEN(REPLACE(SUBSTR(?templateMotifCigarQ9Y6E7MF_01967184, 1, (STRLEN(?templateMotifCigarQ9Y6E7MF_01967184) - STRLEN(REPLACE(?templateMotifCigarQ9Y6E7MF_01967184, CONCAT('^(?:-*[^-]){', STR(((286 - ?templateMotifSequenceMatchBeginPositionQ9Y6E7185) + 1)), '}'), '')))), '[a-z]', '')) AS ?step1196) . BIND((STRLEN(SUBSTR(?targetMotifMatchCigarQ9Y6E7MF_01967186, 1, (STRLEN(?targetMotifMatchCigarQ9Y6E7MF_01967186) - STRLEN(REPLACE(?targetMotifMatchCigarQ9Y6E7MF_01967186, CONCAT('^(?:[a-z]*(?:[A-Z]|-)){', STR(?step1196), '}'), ''))))) - STRLEN(REPLACE(SUBSTR(?targetMotifMatchCigarQ9Y6E7MF_01967186, 1, (STRLEN(?targetMotifMatchCigarQ9Y6E7MF_01967186) - STRLEN(REPLACE(?targetMotifMatchCigarQ9Y6E7MF_01967186, CONCAT('^(?:[a-z]*(?:[A-Z]|-)){', STR(?step1196), '}'), '')))), '[^-]', ''))) AS ?step2197) . BIND(((?step2197 + ?targetMotifMatchRegionMatchBeginPositionMF_01967187) - 1) AS ?thisPositionOn74) . BIND(STRLEN(REPLACE(SUBSTR(?templateMotifCigarQ9Y6E7MF_01967184, 1, (STRLEN(?templateMotifCigarQ9Y6E7MF_01967184) - STRLEN(REPLACE(?templateMotifCigarQ9Y6E7MF_01967184, CONCAT('^(?:-*[^-]){', STR(((288 - ?templateMotifSequenceMatchBeginPositionQ9Y6E7185) + 1)), '}'), '')))), '[a-z]', '')) AS ?step1198) . BIND((STRLEN(SUBSTR(?targetMotifMatchCigarQ9Y6E7MF_01967186, 1, (STRLEN(?targetMotifMatchCigarQ9Y6E7MF_01967186) - STRLEN(REPLACE(?targetMotifMatchCigarQ9Y6E7MF_01967186, CONCAT('^(?:[a-z]*(?:[A-Z]|-)){', STR(?step1198), '}'), ''))))) - STRLEN(REPLACE(SUBSTR(?targetMotifMatchCigarQ9Y6E7MF_01967186, 1, (STRLEN(?targetMotifMatchCigarQ9Y6E7MF_01967186) - STRLEN(REPLACE(?targetMotifMatchCigarQ9Y6E7MF_01967186, CONCAT('^(?:[a-z]*(?:[A-Z]|-)){', STR(?step1198), '}'), '')))), '[^-]', ''))) AS ?step2199) . BIND(((?step2199 + ?targetMotifMatchRegionMatchBeginPositionMF_01967187) - 1) AS ?thisPositionOn75) . BIND(?this AS ?pfs2t200) . BIND(URI(CONCAT(STR(?thisSequence), '#position', STR(?thisPositionOn74))) AS ?pfsb71) . BIND(URI(CONCAT(STR(?thisSequence), '#position', STR(?thisPositionOn75))) AS ?pfse72) . FILTER (REGEX('N[ARNDCQEGHILKMFPSTWYVBZJUOX]G', SUBSTR(?thisSequenceValue, ?thisPositionOn74, (?thisPositionOn75 - ?thisPositionOn74)))) . BIND(URI(CONCAT(STR(?this), '#MF_03161a70')) AS ?annotation70) . BIND(?this AS ?pfs69) . } OPTIONAL { ?this up:sequence ?thisSequence . ?thisSequence rdf:value ?thisSequenceValue . ?templateMotifMatch205 faldo:location ?templateMotifSequenceMatchRegionQ9Y6E7206 ; edam:is_output_of ?templateMotifSequenceProfileAlignmentOperationQ9Y6E7208 ; rdf:type edam:data_0869 ; rdf:value ?templateMotifCigarQ9Y6E7MF_01967201 . ?templateMotifSequenceMatchRegionQ9Y6E7206 faldo:begin ?templateMotifSequenceMatchBeginQ9Y6E7207 . ?templateMotifSequenceMatchBeginQ9Y6E7207 faldo:position ?templateMotifSequenceMatchBeginPositionQ9Y6E7202 ; faldo:reference isoform:Q9Y6E7-1 . ?templateMotifSequenceProfileAlignmentOperationQ9Y6E7208 edam:has_input signature:MF_01967 ; rdf:type edam:operation_0300 . ?targetMotifMatch209 faldo:location ?targetMotifMatchRegionMatch210 ; edam:is_output_of ?targetMotifSequenceAlignmentOperationMF_01967212 ; rdf:type edam:data_0869 ; rdf:value ?targetMotifMatchCigarQ9Y6E7MF_01967203 . ?targetMotifMatchRegionMatch210 faldo:begin ?targetMotifMatchRegionMatchBeginMF_01967211 . ?targetMotifMatchRegionMatchBeginMF_01967211 faldo:position ?targetMotifMatchRegionMatchBeginPositionMF_01967204 ; faldo:reference ?thisSequence . ?targetMotifSequenceAlignmentOperationMF_01967212 edam:has_input signature:MF_01967 ; rdf:type edam:operation_0300 . BIND(STRLEN(REPLACE(SUBSTR(?templateMotifCigarQ9Y6E7MF_01967201, 1, (STRLEN(?templateMotifCigarQ9Y6E7MF_01967201) - STRLEN(REPLACE(?templateMotifCigarQ9Y6E7MF_01967201, CONCAT('^(?:-*[^-]){', STR(((161 - ?templateMotifSequenceMatchBeginPositionQ9Y6E7202) + 1)), '}'), '')))), '[a-z]', '')) AS ?step1213) . BIND((STRLEN(SUBSTR(?targetMotifMatchCigarQ9Y6E7MF_01967203, 1, (STRLEN(?targetMotifMatchCigarQ9Y6E7MF_01967203) - STRLEN(REPLACE(?targetMotifMatchCigarQ9Y6E7MF_01967203, CONCAT('^(?:[a-z]*(?:[A-Z]|-)){', STR(?step1213), '}'), ''))))) - STRLEN(REPLACE(SUBSTR(?targetMotifMatchCigarQ9Y6E7MF_01967203, 1, (STRLEN(?targetMotifMatchCigarQ9Y6E7MF_01967203) - STRLEN(REPLACE(?targetMotifMatchCigarQ9Y6E7MF_01967203, CONCAT('^(?:[a-z]*(?:[A-Z]|-)){', STR(?step1213), '}'), '')))), '[^-]', ''))) AS ?step2214) . BIND(((?step2214 + ?targetMotifMatchRegionMatchBeginPositionMF_01967204) - 1) AS ?thisPositionOn80) . BIND(?thisPositionOn80 AS ?thisPositionOn81) . BIND(?this AS ?pfs2t215) . BIND(URI(CONCAT(STR(?thisSequence), '#position', STR(?thisPositionOn80))) AS ?pfsb78) . BIND(URI(CONCAT(STR(?thisSequence), '#position', STR(?thisPositionOn81))) AS ?pfse79) . FILTER ((SUBSTR(?thisSequenceValue, ?thisPositionOn80, 1) = 'H')) . BIND(URI(CONCAT(STR(?this), '#MF_03161a77')) AS ?annotation77) . BIND(?this AS ?pfs76) . } OPTIONAL { ?this up:sequence ?thisSequence . ?thisSequence rdf:value ?thisSequenceValue . ?templateMotifMatch220 faldo:location ?templateMotifSequenceMatchRegionQ9Y6E7221 ; edam:is_output_of ?templateMotifSequenceProfileAlignmentOperationQ9Y6E7223 ; rdf:type edam:data_0869 ; rdf:value ?templateMotifCigarQ9Y6E7MF_01967216 . ?templateMotifSequenceMatchRegionQ9Y6E7221 faldo:begin ?templateMotifSequenceMatchBeginQ9Y6E7222 . ?templateMotifSequenceMatchBeginQ9Y6E7222 faldo:position ?templateMotifSequenceMatchBeginPositionQ9Y6E7217 ; faldo:reference isoform:Q9Y6E7-1 . ?templateMotifSequenceProfileAlignmentOperationQ9Y6E7223 edam:has_input signature:MF_01967 ; rdf:type edam:operation_0300 . ?targetMotifMatch224 faldo:location ?targetMotifMatchRegionMatch225 ; edam:is_output_of ?targetMotifSequenceAlignmentOperationMF_01967227 ; rdf:type edam:data_0869 ; rdf:value ?targetMotifMatchCigarQ9Y6E7MF_01967218 . ?targetMotifMatchRegionMatch225 faldo:begin ?targetMotifMatchRegionMatchBeginMF_01967226 . ?targetMotifMatchRegionMatchBeginMF_01967226 faldo:position ?targetMotifMatchRegionMatchBeginPositionMF_01967219 ; faldo:reference ?thisSequence . ?targetMotifSequenceAlignmentOperationMF_01967227 edam:has_input signature:MF_01967 ; rdf:type edam:operation_0300 . ?this up:organism ?thisOrganism . ?thisOrganism rdfs:subClassOf+ taxon:40674 . BIND(1 AS ?thisPositionOn86) . BIND(STRLEN(REPLACE(SUBSTR(?templateMotifCigarQ9Y6E7MF_01967216, 1, (STRLEN(?templateMotifCigarQ9Y6E7MF_01967216) - STRLEN(REPLACE(?templateMotifCigarQ9Y6E7MF_01967216, CONCAT('^(?:-*[^-]){', STR(((28 - ?templateMotifSequenceMatchBeginPositionQ9Y6E7217) + 1)), '}'), '')))), '[a-z]', '')) AS ?step1228) . BIND((STRLEN(SUBSTR(?targetMotifMatchCigarQ9Y6E7MF_01967218, 1, (STRLEN(?targetMotifMatchCigarQ9Y6E7MF_01967218) - STRLEN(REPLACE(?targetMotifMatchCigarQ9Y6E7MF_01967218, CONCAT('^(?:[a-z]*(?:[A-Z]|-)){', STR(?step1228), '}'), ''))))) - STRLEN(REPLACE(SUBSTR(?targetMotifMatchCigarQ9Y6E7MF_01967218, 1, (STRLEN(?targetMotifMatchCigarQ9Y6E7MF_01967218) - STRLEN(REPLACE(?targetMotifMatchCigarQ9Y6E7MF_01967218, CONCAT('^(?:[a-z]*(?:[A-Z]|-)){', STR(?step1228), '}'), '')))), '[^-]', ''))) AS ?step2229) . BIND(((?step2229 + ?targetMotifMatchRegionMatchBeginPositionMF_01967219) - 1) AS ?thisPositionOn87) . BIND(?this AS ?pfs3t230) . BIND(URI(CONCAT(STR(?thisSequence), '#position', STR(?thisPositionOn86))) AS ?pfsb84) . BIND(URI(CONCAT(STR(?thisSequence), '#position', STR(?thisPositionOn87))) AS ?pfse85) . FILTER ((BOUND(?thisPositionOn86) && BOUND(?thisPositionOn87))) . BIND(URI(CONCAT(STR(?this), '#MF_03161a83')) AS ?annotation83) . BIND(?this AS ?pfs82) . } OPTIONAL { ?this up:sequence ?thisSequence . ?thisSequence rdf:value ?thisSequenceValue . ?templateMotifMatch235 faldo:location ?templateMotifSequenceMatchRegionQ9Y6E7236 ; edam:is_output_of ?templateMotifSequenceProfileAlignmentOperationQ9Y6E7238 ; rdf:type edam:data_0869 ; rdf:value ?templateMotifCigarQ9Y6E7MF_01967231 . ?templateMotifSequenceMatchRegionQ9Y6E7236 faldo:begin ?templateMotifSequenceMatchBeginQ9Y6E7237 . ?templateMotifSequenceMatchBeginQ9Y6E7237 faldo:position ?templateMotifSequenceMatchBeginPositionQ9Y6E7232 ; faldo:reference isoform:Q9Y6E7-1 . ?templateMotifSequenceProfileAlignmentOperationQ9Y6E7238 edam:has_input signature:MF_01967 ; rdf:type edam:operation_0300 . ?targetMotifMatch239 faldo:location ?targetMotifMatchRegionMatch240 ; edam:is_output_of ?targetMotifSequenceAlignmentOperationMF_01967242 ; rdf:type edam:data_0869 ; rdf:value ?targetMotifMatchCigarQ9Y6E7MF_01967233 . ?targetMotifMatchRegionMatch240 faldo:begin ?targetMotifMatchRegionMatchBeginMF_01967241 . ?targetMotifMatchRegionMatchBeginMF_01967241 faldo:position ?targetMotifMatchRegionMatchBeginPositionMF_01967234 ; faldo:reference ?thisSequence . ?targetMotifSequenceAlignmentOperationMF_01967242 edam:has_input signature:MF_01967 ; rdf:type edam:operation_0300 . ?this up:organism ?thisOrganism . ?thisOrganism rdfs:subClassOf+ taxon:40674 . BIND(STRLEN(REPLACE(SUBSTR(?templateMotifCigarQ9Y6E7MF_01967231, 1, (STRLEN(?templateMotifCigarQ9Y6E7MF_01967231) - STRLEN(REPLACE(?templateMotifCigarQ9Y6E7MF_01967231, CONCAT('^(?:-*[^-]){', STR(((29 - ?templateMotifSequenceMatchBeginPositionQ9Y6E7232) + 1)), '}'), '')))), '[a-z]', '')) AS ?step1243) . BIND((STRLEN(SUBSTR(?targetMotifMatchCigarQ9Y6E7MF_01967233, 1, (STRLEN(?targetMotifMatchCigarQ9Y6E7MF_01967233) - STRLEN(REPLACE(?targetMotifMatchCigarQ9Y6E7MF_01967233, CONCAT('^(?:[a-z]*(?:[A-Z]|-)){', STR(?step1243), '}'), ''))))) - STRLEN(REPLACE(SUBSTR(?targetMotifMatchCigarQ9Y6E7MF_01967233, 1, (STRLEN(?targetMotifMatchCigarQ9Y6E7MF_01967233) - STRLEN(REPLACE(?targetMotifMatchCigarQ9Y6E7MF_01967233, CONCAT('^(?:[a-z]*(?:[A-Z]|-)){', STR(?step1243), '}'), '')))), '[^-]', ''))) AS ?step2244) . BIND(((?step2244 + ?targetMotifMatchRegionMatchBeginPositionMF_01967234) - 1) AS ?thisPositionOn92) . BIND(STRLEN(?thisSequenceValue) AS ?thisPositionOn93) . BIND(?this AS ?pfs3t245) . BIND(URI(CONCAT(STR(?thisSequence), '#position', STR(?thisPositionOn92))) AS ?pfsb90) . BIND(URI(CONCAT(STR(?thisSequence), '#position', STR(?thisPositionOn93))) AS ?pfse91) . FILTER ((BOUND(?thisPositionOn92) && BOUND(?thisPositionOn93))) . BIND(URI(CONCAT(STR(?this), '#MF_03161a89')) AS ?annotation89) . BIND(?this AS ?pfs88) . } OPTIONAL { ?this a up:Protein . BIND(?this AS ?caseWithTag246) . } BIND(IF(BOUND(?tagFTGRP_1), ?caseWithTag246, ?UNBOUND_VARIABLE) AS ?case5) . OPTIONAL { ?this a up:Protein . ?this up:organism ?thisOrganism . ?thisOrganism rdfs:subClassOf+ taxon:40674 . BIND(?this AS ?case6) . BIND(URI(CONCAT(STR(?this), '#MF_03161a7')) AS ?name7) . BIND(URI(CONCAT(STR(?this), '#MF_03161a8')) AS ?name8) . BIND(URI(CONCAT(STR(?this), '#MF_03161a9')) AS ?name9) . BIND(URI(CONCAT(STR(?this), '#MF_03161a10')) AS ?name10) . BIND(URI(CONCAT(STR(?this), '#MF_03161a11')) AS ?name11) . BIND(URI(CONCAT(STR(?this), '#MF_03161a12')) AS ?name12) . } OPTIONAL { ?this a up:Protein . ?this up:organism ?thisOrganism . FILTER (! (EXISTS { ?thisOrganism rdfs:subClassOf+ taxon:40674 . })) . BIND(?this AS ?case13) . BIND(URI(CONCAT(STR(?this), '#MF_03161a14')) AS ?name14) . BIND(URI(CONCAT(STR(?this), '#MF_03161a15')) AS ?name15) . } }