@prefix rdf: . @prefix rdfs: . @prefix rdf4j: . @prefix sesame: . @prefix owl: . @prefix xsd: . @prefix fn: . a , ; , , , , , , , , , , , , , , , , , , , , , , , , , , , , , , , , , , , , , , , , , , , , , , , , , , , , , , , , , , , , , , , , , , , , , , , , , , , , , , , , , , , , , , , , , , , , , , , , , , , , , , , , , , , ; ; ; ; """CONSTRUCT { _:979886 up:source unirule:MF_04162 . _:979887 up:source unirule:MF_04162 . _:979888 up:source unirule:MF_04162 . _:979889 up:source unirule:MF_04162 . _:979890 up:source unirule:MF_04162 . _:979891 up:source unirule:MF_04162 . _:979892 up:source unirule:MF_04162 . _:979893 up:source unirule:MF_04162 . _:979894 up:source unirule:MF_04162 . _:979895 up:source unirule:MF_04162 . _:979896 up:source unirule:MF_04162 . _:979897 up:source unirule:MF_04162 . _:979898 up:source unirule:MF_04162 . _:979899 up:source unirule:MF_04162 . _:979900 up:source unirule:MF_04162 . _:979901 up:source unirule:MF_04162 . _:979902 up:source unirule:MF_04162 . _:979903 up:source unirule:MF_04162 . _:979904 up:source unirule:MF_04162 . ?this up:alternativeName ?name1 ; up:annotation ?annotation2 , ?annotation3 , ?annotation4 ; up:classifiedWith GO:0003677 , GO:0003689 , GO:0005524 , GO:0016887 , GO:0039693 , keyword:1194 , keyword:238 , keyword:378 , keyword:547 , keyword:67 ; up:recommendedName ?name0 . ?name0 up:ecName '3.6.4.-' ; up:fullName 'Sliding-clamp-loader large subunit' ; rdf:type up:Structured_Name . ?name1 up:fullName 'Clamp loader gp44 subunit' ; rdf:type up:Structured_Name . ?annotation2 a up:Function_Annotation ; rdfs:comment 'Forms the sliding-clamp-loader together with the small subunit. Functions as an ATPase enzyme. The clamp loader holds the clamp in an open conformation and places it onto the DNA. 4 ATP molecules must bind to the sliding-clamp-loader before the latter can open the sliding clamp. ATP hydrolysis triggers the detachment of the sliding clamp from the sliding-clamp-loader, freeing the sliding clamp to track along DNA.' . ?annotation3 a up:Subunit_Annotation ; rdfs:comment 'The sliding-clamp-loader consists of 4 large subunits and 1 small subunit. Interacts with the sliding clamp; this interaction allows the sliding-clamp-loader to open the sliding clamp. Part of the replicase complex that includes the DNA polymerase, the polymerase clamp, the clamp loader complex, the single-stranded DNA binding protein, the primase, the helicase and the helicase assembly factor.' . ?annotation4 a up:Similarity_Annotation ; rdfs:comment 'Belongs to the Tevenvirinae sliding-clamp-loader large subunit family.' . ?pfs5 up:annotation ?annotation6 . ?annotation6 faldo:begin ?pfsb7 ; faldo:end ?pfse8 ; up:ligand ?ligand9 ; rdf:type up:Binding_Site_Annotation . ?pfsb7 faldo:position ?thisPositionOn10 ; rdf:type faldo:ExactPosition . ?pfse8 faldo:position ?thisPositionOn11 ; rdf:type faldo:ExactPosition . ?ligand9 rdfs:subClassOf chebi:30616 . ?pfs12 up:annotation ?annotation13 . ?annotation13 faldo:begin ?pfsb14 ; faldo:end ?pfse15 ; up:ligand ?ligand16 ; rdf:type up:Binding_Site_Annotation . ?pfsb14 faldo:position ?thisPositionOn17 ; rdf:type faldo:ExactPosition . ?pfse15 faldo:position ?thisPositionOn18 ; rdf:type faldo:ExactPosition . ?ligand16 rdfs:subClassOf chebi:30616 . ?pfs19 up:annotation ?annotation20 . ?annotation20 faldo:begin ?pfsb21 ; faldo:end ?pfse22 ; up:ligand ?ligand23 ; rdf:type up:Binding_Site_Annotation . ?pfsb21 faldo:position ?thisPositionOn24 ; rdf:type faldo:ExactPosition . ?pfse22 faldo:position ?thisPositionOn25 ; rdf:type faldo:ExactPosition . ?ligand23 rdfs:subClassOf chebi:30616 . ?pfs26 up:annotation ?annotation27 . ?annotation27 faldo:begin ?pfsb28 ; faldo:end ?pfse29 ; up:ligand ?ligand30 ; rdf:type up:Binding_Site_Annotation . ?pfsb28 faldo:position ?thisPositionOn31 ; rdf:type faldo:ExactPosition . ?pfse29 faldo:position ?thisPositionOn32 ; rdf:type faldo:ExactPosition . ?ligand30 rdfs:subClassOf chebi:30616 . _:979905 a rdf:Statement ; up:attribution _:979886 ; rdf:subject ?this ; rdf:predicate up:recommendedName ; rdf:object ?name0 . _:979906 a rdf:Statement ; up:attribution _:979887 ; rdf:subject ?this ; rdf:predicate up:alternativeName ; rdf:object ?name1 . _:979907 a rdf:Statement ; up:attribution _:979888 ; rdf:subject ?this ; rdf:predicate up:annotation ; rdf:object ?annotation2 . _:979908 a rdf:Statement ; up:attribution _:979889 ; rdf:subject ?this ; rdf:predicate up:annotation ; rdf:object ?annotation3 . _:979909 a rdf:Statement ; up:attribution _:979890 ; rdf:subject ?this ; rdf:predicate up:annotation ; rdf:object ?annotation4 . _:979910 a rdf:Statement ; up:attribution _:979891 ; rdf:subject ?this ; rdf:predicate up:classifiedWith ; rdf:object keyword:67 . _:979911 a rdf:Statement ; up:attribution _:979892 ; rdf:subject ?this ; rdf:predicate up:classifiedWith ; rdf:object keyword:1194 . _:979912 a rdf:Statement ; up:attribution _:979893 ; rdf:subject ?this ; rdf:predicate up:classifiedWith ; rdf:object keyword:238 . _:979913 a rdf:Statement ; up:attribution _:979894 ; rdf:subject ?this ; rdf:predicate up:classifiedWith ; rdf:object keyword:378 . _:979914 a rdf:Statement ; up:attribution _:979895 ; rdf:subject ?this ; rdf:predicate up:classifiedWith ; rdf:object keyword:547 . _:979915 a rdf:Statement ; up:attribution _:979896 ; rdf:subject ?this ; rdf:predicate up:classifiedWith ; rdf:object GO:0005524 . _:979916 a rdf:Statement ; up:attribution _:979897 ; rdf:subject ?this ; rdf:predicate up:classifiedWith ; rdf:object GO:0003677 . _:979917 a rdf:Statement ; up:attribution _:979898 ; rdf:subject ?this ; rdf:predicate up:classifiedWith ; rdf:object GO:0039693 . _:979918 a rdf:Statement ; up:attribution _:979899 ; rdf:subject ?this ; rdf:predicate up:classifiedWith ; rdf:object GO:0003689 . _:979919 a rdf:Statement ; up:attribution _:979900 ; rdf:subject ?this ; rdf:predicate up:classifiedWith ; rdf:object GO:0016887 . _:979920 a rdf:Statement ; up:source unirule:MF_04162 ; rdf:subject ?pfs5 ; rdf:predicate up:annotation ; rdf:object ?annotation6 . _:979921 a rdf:Statement ; up:attribution _:979901 ; rdf:subject ?pfs5 ; rdf:predicate up:annotation ; rdf:object ?annotation6 . _:979922 a rdf:Statement ; up:source unirule:MF_04162 ; rdf:subject ?pfs12 ; rdf:predicate up:annotation ; rdf:object ?annotation13 . _:979923 a rdf:Statement ; up:attribution _:979902 ; rdf:subject ?pfs12 ; rdf:predicate up:annotation ; rdf:object ?annotation13 . _:979924 a rdf:Statement ; up:source unirule:MF_04162 ; rdf:subject ?pfs19 ; rdf:predicate up:annotation ; rdf:object ?annotation20 . _:979925 a rdf:Statement ; up:attribution _:979903 ; rdf:subject ?pfs19 ; rdf:predicate up:annotation ; rdf:object ?annotation20 . _:979926 a rdf:Statement ; up:source unirule:MF_04162 ; rdf:subject ?pfs26 ; rdf:predicate up:annotation ; rdf:object ?annotation27 . _:979927 a rdf:Statement ; up:attribution _:979904 ; rdf:subject ?pfs26 ; rdf:predicate up:annotation ; rdf:object ?annotation27 . } WHERE { #baseURI: http://purl.uniprot.org/unirule/MF_04162 #Rule MF_04162 Created by:? on:2021-04-20 Modified by:Edouard de Castro on:2022-11-19 ?this up:organism ?thisOrganism ; rdfs:seeAlso signature:MF_04162 . ?thisOrganism rdfs:subClassOf+ taxon:10239 . BIND(URI(CONCAT(STR(?this), '#MF_04162a0')) AS ?name0) . BIND(URI(CONCAT(STR(?this), '#MF_04162a1')) AS ?name1) . BIND(URI(CONCAT(STR(?this), '#MF_04162a2')) AS ?annotation2) . BIND(URI(CONCAT(STR(?this), '#MF_04162a3')) AS ?annotation3) . BIND(URI(CONCAT(STR(?this), '#MF_04162a4')) AS ?annotation4) . OPTIONAL { ?this up:sequence ?thisSequence . ?thisSequence rdf:value ?thisSequenceValue . ?templateMotifMatch37 faldo:location ?templateMotifSequenceMatchRegionP0452638 ; edam:is_output_of ?templateMotifSequenceProfileAlignmentOperationP0452640 ; rdf:type edam:data_0869 ; rdf:value ?templateMotifCigarP04526MF_0416233 . ?templateMotifSequenceMatchRegionP0452638 faldo:begin ?templateMotifSequenceMatchBeginP0452639 . ?templateMotifSequenceMatchBeginP0452639 faldo:position ?templateMotifSequenceMatchBeginPositionP0452634 ; faldo:reference isoform:P04526-1 . ?templateMotifSequenceProfileAlignmentOperationP0452640 edam:has_input signature:MF_04162 ; rdf:type edam:operation_0300 . ?targetMotifMatch41 faldo:location ?targetMotifMatchRegionMatch42 ; edam:is_output_of ?targetMotifSequenceAlignmentOperationMF_0416244 ; rdf:type edam:data_0869 ; rdf:value ?targetMotifMatchCigarP04526MF_0416235 . ?targetMotifMatchRegionMatch42 faldo:begin ?targetMotifMatchRegionMatchBeginMF_0416243 . ?targetMotifMatchRegionMatchBeginMF_0416243 faldo:position ?targetMotifMatchRegionMatchBeginPositionMF_0416236 ; faldo:reference ?thisSequence . ?targetMotifSequenceAlignmentOperationMF_0416244 edam:has_input signature:MF_04162 ; rdf:type edam:operation_0300 . BIND(STRLEN(REPLACE(SUBSTR(?templateMotifCigarP04526MF_0416233, 1, (STRLEN(?templateMotifCigarP04526MF_0416233) - STRLEN(REPLACE(?templateMotifCigarP04526MF_0416233, CONCAT('^(?:-*[^-]){', STR(((12 - ?templateMotifSequenceMatchBeginPositionP0452634) + 1)), '}'), '')))), '[a-z]', '')) AS ?step145) . BIND((STRLEN(SUBSTR(?targetMotifMatchCigarP04526MF_0416235, 1, (STRLEN(?targetMotifMatchCigarP04526MF_0416235) - STRLEN(REPLACE(?targetMotifMatchCigarP04526MF_0416235, CONCAT('^(?:[a-z]*(?:[A-Z]|-)){', STR(?step145), '}'), ''))))) - STRLEN(REPLACE(SUBSTR(?targetMotifMatchCigarP04526MF_0416235, 1, (STRLEN(?targetMotifMatchCigarP04526MF_0416235) - STRLEN(REPLACE(?targetMotifMatchCigarP04526MF_0416235, CONCAT('^(?:[a-z]*(?:[A-Z]|-)){', STR(?step145), '}'), '')))), '[^-]', ''))) AS ?step246) . BIND(((?step246 + ?targetMotifMatchRegionMatchBeginPositionMF_0416236) - 1) AS ?thisPositionOn10) . BIND(STRLEN(REPLACE(SUBSTR(?templateMotifCigarP04526MF_0416233, 1, (STRLEN(?templateMotifCigarP04526MF_0416233) - STRLEN(REPLACE(?templateMotifCigarP04526MF_0416233, CONCAT('^(?:-*[^-]){', STR(((15 - ?templateMotifSequenceMatchBeginPositionP0452634) + 1)), '}'), '')))), '[a-z]', '')) AS ?step147) . BIND((STRLEN(SUBSTR(?targetMotifMatchCigarP04526MF_0416235, 1, (STRLEN(?targetMotifMatchCigarP04526MF_0416235) - STRLEN(REPLACE(?targetMotifMatchCigarP04526MF_0416235, CONCAT('^(?:[a-z]*(?:[A-Z]|-)){', STR(?step147), '}'), ''))))) - STRLEN(REPLACE(SUBSTR(?targetMotifMatchCigarP04526MF_0416235, 1, (STRLEN(?targetMotifMatchCigarP04526MF_0416235) - STRLEN(REPLACE(?targetMotifMatchCigarP04526MF_0416235, CONCAT('^(?:[a-z]*(?:[A-Z]|-)){', STR(?step147), '}'), '')))), '[^-]', ''))) AS ?step248) . BIND(((?step248 + ?targetMotifMatchRegionMatchBeginPositionMF_0416236) - 1) AS ?thisPositionOn11) . BIND(?this AS ?pfs1t49) . BIND(URI(CONCAT(STR(?thisSequence), '#position', STR(?thisPositionOn10))) AS ?pfsb7) . BIND(URI(CONCAT(STR(?thisSequence), '#position', STR(?thisPositionOn11))) AS ?pfse8) . FILTER (REGEX('[DEILSTV][EILMNQ][KR]Y', SUBSTR(?thisSequenceValue, ?thisPositionOn10, (?thisPositionOn11 - ?thisPositionOn10)))) . BIND(URI(CONCAT(STR(?this), '#MF_04162a6')) AS ?annotation6) . BIND(?this AS ?pfs5) . } OPTIONAL { ?this up:sequence ?thisSequence . ?thisSequence rdf:value ?thisSequenceValue . ?templateMotifMatch54 faldo:location ?templateMotifSequenceMatchRegionP0452655 ; edam:is_output_of ?templateMotifSequenceProfileAlignmentOperationP0452657 ; rdf:type edam:data_0869 ; rdf:value ?templateMotifCigarP04526MF_0416250 . ?templateMotifSequenceMatchRegionP0452655 faldo:begin ?templateMotifSequenceMatchBeginP0452656 . ?templateMotifSequenceMatchBeginP0452656 faldo:position ?templateMotifSequenceMatchBeginPositionP0452651 ; faldo:reference isoform:P04526-1 . ?templateMotifSequenceProfileAlignmentOperationP0452657 edam:has_input signature:MF_04162 ; rdf:type edam:operation_0300 . ?targetMotifMatch58 faldo:location ?targetMotifMatchRegionMatch59 ; edam:is_output_of ?targetMotifSequenceAlignmentOperationMF_0416261 ; rdf:type edam:data_0869 ; rdf:value ?targetMotifMatchCigarP04526MF_0416252 . ?targetMotifMatchRegionMatch59 faldo:begin ?targetMotifMatchRegionMatchBeginMF_0416260 . ?targetMotifMatchRegionMatchBeginMF_0416260 faldo:position ?targetMotifMatchRegionMatchBeginPositionMF_0416253 ; faldo:reference ?thisSequence . ?targetMotifSequenceAlignmentOperationMF_0416261 edam:has_input signature:MF_04162 ; rdf:type edam:operation_0300 . BIND(STRLEN(REPLACE(SUBSTR(?templateMotifCigarP04526MF_0416250, 1, (STRLEN(?templateMotifCigarP04526MF_0416250) - STRLEN(REPLACE(?templateMotifCigarP04526MF_0416250, CONCAT('^(?:-*[^-]){', STR(((53 - ?templateMotifSequenceMatchBeginPositionP0452651) + 1)), '}'), '')))), '[a-z]', '')) AS ?step162) . BIND((STRLEN(SUBSTR(?targetMotifMatchCigarP04526MF_0416252, 1, (STRLEN(?targetMotifMatchCigarP04526MF_0416252) - STRLEN(REPLACE(?targetMotifMatchCigarP04526MF_0416252, CONCAT('^(?:[a-z]*(?:[A-Z]|-)){', STR(?step162), '}'), ''))))) - STRLEN(REPLACE(SUBSTR(?targetMotifMatchCigarP04526MF_0416252, 1, (STRLEN(?targetMotifMatchCigarP04526MF_0416252) - STRLEN(REPLACE(?targetMotifMatchCigarP04526MF_0416252, CONCAT('^(?:[a-z]*(?:[A-Z]|-)){', STR(?step162), '}'), '')))), '[^-]', ''))) AS ?step263) . BIND(((?step263 + ?targetMotifMatchRegionMatchBeginPositionMF_0416253) - 1) AS ?thisPositionOn17) . BIND(STRLEN(REPLACE(SUBSTR(?templateMotifCigarP04526MF_0416250, 1, (STRLEN(?templateMotifCigarP04526MF_0416250) - STRLEN(REPLACE(?templateMotifCigarP04526MF_0416250, CONCAT('^(?:-*[^-]){', STR(((58 - ?templateMotifSequenceMatchBeginPositionP0452651) + 1)), '}'), '')))), '[a-z]', '')) AS ?step164) . BIND((STRLEN(SUBSTR(?targetMotifMatchCigarP04526MF_0416252, 1, (STRLEN(?targetMotifMatchCigarP04526MF_0416252) - STRLEN(REPLACE(?targetMotifMatchCigarP04526MF_0416252, CONCAT('^(?:[a-z]*(?:[A-Z]|-)){', STR(?step164), '}'), ''))))) - STRLEN(REPLACE(SUBSTR(?targetMotifMatchCigarP04526MF_0416252, 1, (STRLEN(?targetMotifMatchCigarP04526MF_0416252) - STRLEN(REPLACE(?targetMotifMatchCigarP04526MF_0416252, CONCAT('^(?:[a-z]*(?:[A-Z]|-)){', STR(?step164), '}'), '')))), '[^-]', ''))) AS ?step265) . BIND(((?step265 + ?targetMotifMatchRegionMatchBeginPositionMF_0416253) - 1) AS ?thisPositionOn18) . BIND(?this AS ?pfs1t66) . BIND(URI(CONCAT(STR(?thisSequence), '#position', STR(?thisPositionOn17))) AS ?pfsb14) . BIND(URI(CONCAT(STR(?thisSequence), '#position', STR(?thisPositionOn18))) AS ?pfse15) . FILTER (REGEX('G[ARNDCQEGHILKMFPSTWYVBZJUOX]GK[ST][ST]', SUBSTR(?thisSequenceValue, ?thisPositionOn17, (?thisPositionOn18 - ?thisPositionOn17)))) . BIND(URI(CONCAT(STR(?this), '#MF_04162a13')) AS ?annotation13) . BIND(?this AS ?pfs12) . } OPTIONAL { ?this up:sequence ?thisSequence . ?thisSequence rdf:value ?thisSequenceValue . ?templateMotifMatch71 faldo:location ?templateMotifSequenceMatchRegionP0452672 ; edam:is_output_of ?templateMotifSequenceProfileAlignmentOperationP0452674 ; rdf:type edam:data_0869 ; rdf:value ?templateMotifCigarP04526MF_0416267 . ?templateMotifSequenceMatchRegionP0452672 faldo:begin ?templateMotifSequenceMatchBeginP0452673 . ?templateMotifSequenceMatchBeginP0452673 faldo:position ?templateMotifSequenceMatchBeginPositionP0452668 ; faldo:reference isoform:P04526-1 . ?templateMotifSequenceProfileAlignmentOperationP0452674 edam:has_input signature:MF_04162 ; rdf:type edam:operation_0300 . ?targetMotifMatch75 faldo:location ?targetMotifMatchRegionMatch76 ; edam:is_output_of ?targetMotifSequenceAlignmentOperationMF_0416278 ; rdf:type edam:data_0869 ; rdf:value ?targetMotifMatchCigarP04526MF_0416269 . ?targetMotifMatchRegionMatch76 faldo:begin ?targetMotifMatchRegionMatchBeginMF_0416277 . ?targetMotifMatchRegionMatchBeginMF_0416277 faldo:position ?targetMotifMatchRegionMatchBeginPositionMF_0416270 ; faldo:reference ?thisSequence . ?targetMotifSequenceAlignmentOperationMF_0416278 edam:has_input signature:MF_04162 ; rdf:type edam:operation_0300 . BIND(STRLEN(REPLACE(SUBSTR(?templateMotifCigarP04526MF_0416267, 1, (STRLEN(?templateMotifCigarP04526MF_0416267) - STRLEN(REPLACE(?templateMotifCigarP04526MF_0416267, CONCAT('^(?:-*[^-]){', STR(((24 - ?templateMotifSequenceMatchBeginPositionP0452668) + 1)), '}'), '')))), '[a-z]', '')) AS ?step179) . BIND((STRLEN(SUBSTR(?targetMotifMatchCigarP04526MF_0416269, 1, (STRLEN(?targetMotifMatchCigarP04526MF_0416269) - STRLEN(REPLACE(?targetMotifMatchCigarP04526MF_0416269, CONCAT('^(?:[a-z]*(?:[A-Z]|-)){', STR(?step179), '}'), ''))))) - STRLEN(REPLACE(SUBSTR(?targetMotifMatchCigarP04526MF_0416269, 1, (STRLEN(?targetMotifMatchCigarP04526MF_0416269) - STRLEN(REPLACE(?targetMotifMatchCigarP04526MF_0416269, CONCAT('^(?:[a-z]*(?:[A-Z]|-)){', STR(?step179), '}'), '')))), '[^-]', ''))) AS ?step280) . BIND(((?step280 + ?targetMotifMatchRegionMatchBeginPositionMF_0416270) - 1) AS ?thisPositionOn24) . BIND(?thisPositionOn24 AS ?thisPositionOn25) . BIND(?this AS ?pfs1t81) . BIND(URI(CONCAT(STR(?thisSequence), '#position', STR(?thisPositionOn24))) AS ?pfsb21) . BIND(URI(CONCAT(STR(?thisSequence), '#position', STR(?thisPositionOn25))) AS ?pfse22) . FILTER (REGEX('[ILV]', SUBSTR(?thisSequenceValue, ?thisPositionOn24, 1))) . BIND(URI(CONCAT(STR(?this), '#MF_04162a20')) AS ?annotation20) . BIND(?this AS ?pfs19) . } OPTIONAL { ?this up:sequence ?thisSequence . ?thisSequence rdf:value ?thisSequenceValue . ?templateMotifMatch86 faldo:location ?templateMotifSequenceMatchRegionP0452687 ; edam:is_output_of ?templateMotifSequenceProfileAlignmentOperationP0452689 ; rdf:type edam:data_0869 ; rdf:value ?templateMotifCigarP04526MF_0416282 . ?templateMotifSequenceMatchRegionP0452687 faldo:begin ?templateMotifSequenceMatchBeginP0452688 . ?templateMotifSequenceMatchBeginP0452688 faldo:position ?templateMotifSequenceMatchBeginPositionP0452683 ; faldo:reference isoform:P04526-1 . ?templateMotifSequenceProfileAlignmentOperationP0452689 edam:has_input signature:MF_04162 ; rdf:type edam:operation_0300 . ?targetMotifMatch90 faldo:location ?targetMotifMatchRegionMatch91 ; edam:is_output_of ?targetMotifSequenceAlignmentOperationMF_0416293 ; rdf:type edam:data_0869 ; rdf:value ?targetMotifMatchCigarP04526MF_0416284 . ?targetMotifMatchRegionMatch91 faldo:begin ?targetMotifMatchRegionMatchBeginMF_0416292 . ?targetMotifMatchRegionMatchBeginMF_0416292 faldo:position ?targetMotifMatchRegionMatchBeginPositionMF_0416285 ; faldo:reference ?thisSequence . ?targetMotifSequenceAlignmentOperationMF_0416293 edam:has_input signature:MF_04162 ; rdf:type edam:operation_0300 . BIND(STRLEN(REPLACE(SUBSTR(?templateMotifCigarP04526MF_0416282, 1, (STRLEN(?templateMotifCigarP04526MF_0416282) - STRLEN(REPLACE(?templateMotifCigarP04526MF_0416282, CONCAT('^(?:-*[^-]){', STR(((205 - ?templateMotifSequenceMatchBeginPositionP0452683) + 1)), '}'), '')))), '[a-z]', '')) AS ?step194) . BIND((STRLEN(SUBSTR(?targetMotifMatchCigarP04526MF_0416284, 1, (STRLEN(?targetMotifMatchCigarP04526MF_0416284) - STRLEN(REPLACE(?targetMotifMatchCigarP04526MF_0416284, CONCAT('^(?:[a-z]*(?:[A-Z]|-)){', STR(?step194), '}'), ''))))) - STRLEN(REPLACE(SUBSTR(?targetMotifMatchCigarP04526MF_0416284, 1, (STRLEN(?targetMotifMatchCigarP04526MF_0416284) - STRLEN(REPLACE(?targetMotifMatchCigarP04526MF_0416284, CONCAT('^(?:[a-z]*(?:[A-Z]|-)){', STR(?step194), '}'), '')))), '[^-]', ''))) AS ?step295) . BIND(((?step295 + ?targetMotifMatchRegionMatchBeginPositionMF_0416285) - 1) AS ?thisPositionOn31) . BIND(?thisPositionOn31 AS ?thisPositionOn32) . BIND(?this AS ?pfs1t96) . BIND(URI(CONCAT(STR(?thisSequence), '#position', STR(?thisPositionOn31))) AS ?pfsb28) . BIND(URI(CONCAT(STR(?thisSequence), '#position', STR(?thisPositionOn32))) AS ?pfse29) . FILTER ((SUBSTR(?thisSequenceValue, ?thisPositionOn31, 1) = 'R')) . BIND(URI(CONCAT(STR(?this), '#MF_04162a27')) AS ?annotation27) . BIND(?this AS ?pfs26) . } } """ . .