CONSTRUCT { _:971356 up:source unirule:MF_04166 . _:971357 up:source unirule:MF_04166 . _:971358 up:source unirule:MF_04166 . _:971359 up:source unirule:MF_04166 . _:971360 up:source unirule:MF_04166 . _:971361 up:source unirule:MF_04166 . _:971362 up:source unirule:MF_04166 . _:971363 up:source unirule:MF_04166 . _:971364 up:source unirule:MF_04166 . _:971365 up:source unirule:MF_04166 . _:971366 up:source unirule:MF_04166 . _:971367 up:source unirule:MF_04166 . _:971368 up:source unirule:MF_04166 . _:971369 up:source unirule:MF_04166 . _:971370 up:source unirule:MF_04166 . _:971371 up:source unirule:MF_04166 . _:971372 up:source unirule:MF_04166 . _:971373 up:source unirule:MF_04166 . _:971374 up:source unirule:MF_04166 . _:971375 up:source unirule:MF_04166 . _:971376 up:source unirule:MF_04166 . _:971377 up:source unirule:MF_04166 . _:971378 up:source unirule:MF_04166 . _:971379 up:source unirule:MF_04166 . _:971380 up:source unirule:MF_04166 . _:971381 up:source unirule:MF_04166 . _:971382 up:source unirule:MF_04166 . _:971383 up:source unirule:MF_04166 . _:971384 up:source unirule:MF_04166 . _:971385 up:source unirule:MF_04166 . _:971386 up:source unirule:MF_04166 . _:971387 up:source unirule:MF_04166 . _:971388 up:source unirule:MF_04166 . _:971389 up:source unirule:MF_04166 . _:971390 up:source unirule:MF_04166 . _:971391 up:source unirule:MF_04166 . _:971392 up:source unirule:MF_04166 . _:971393 up:source unirule:MF_04166 . _:971394 up:source unirule:MF_04166 . _:971395 up:source unirule:MF_04166 . _:971396 up:source unirule:MF_04166 . _:971397 up:source unirule:MF_04166 . ?this up:alternativeName ?name1 , ?name2 ; up:annotation ?annotation4 , ?annotation5 , ?annotation7 , ?annotation8 ; up:classifiedWith GO:0000287 , GO:0005524 , GO:0006164 , keyword:436 , keyword:460 , keyword:479 , keyword:547 , keyword:658 , keyword:67 ; up:recommendedName ?name0 . ?name0 up:ecName '6.3.4.25' ; up:fullName "N6-succino-2-amino-2'-deoxyadenylate synthase" ; rdf:type up:Structured_Name . ?name1 up:fullName "2-amino-2'-deoxyadenylo-succinate synthase" ; rdf:type up:Structured_Name . ?name2 up:fullName 'PurZ' ; rdf:type up:Structured_Name . ?gene3 skos:prefLabel 'purZ' . ?annotation4 a up:Function_Annotation ; rdfs:comment "Involved in the synthesis of the atypical nucleotide dZTP (2-amino-2'-deoxyadenosine-5'-triphosphate). Catalyzes the condensation of aspartate with deoxyguanylate into dSMP (N6-succino-2-amino-2'-deoxyadenylate), which undergoes defumarylation and phosphorylation respectively by host PurB and guanylate/nucleoside diphosphate kinases to give dZTP. dZTP is integrated into the viral genome instead of adenine by the viral DNA polymerase. This Z-base probably completely replaces adenosine and forms a triple bond to the opposite T-base. The resulting non-standard viral DNA is called Z-genome. The chemically modified DNA is probably harder for the host bacteria to digest with nucleases or restriction enzymes." . ?annotation5 up:activity ?activity6 ; rdf:type up:Catalytic_Activity_Annotation . ?activity6 up:catalyticActivity <http://rdf.rhea-db.org/67628>; up:enzymeClass <http://purl.uniprot.org/enzyme/6.3.4.25>. ?annotation7 a up:Pathway_Annotation ; rdfs:comment 'Purine metabolism.' . ?annotation8 a up:Similarity_Annotation ; rdfs:comment 'Belongs to the Caudovirales PurZ family.' . ?pfs10 up:annotation ?annotation11 , ?annotation17 , ?annotation23 . ?annotation11 faldo:begin ?pfsb12 ; faldo:end ?pfse13 ; up:ligand ?ligand14 ; rdf:type up:Binding_Site_Annotation . ?pfsb12 faldo:position ?thisPositionOn15 ; rdf:type faldo:ExactPosition . ?pfse13 faldo:position ?thisPositionOn16 ; rdf:type faldo:ExactPosition . ?ligand14 rdfs:subClassOf chebi:18420 . ?annotation17 faldo:begin ?pfsb18 ; faldo:end ?pfse19 ; up:ligand ?ligand20 ; rdf:type up:Binding_Site_Annotation . ?pfsb18 faldo:position ?thisPositionOn21 ; rdf:type faldo:ExactPosition . ?pfse19 faldo:position ?thisPositionOn22 ; rdf:type faldo:ExactPosition . ?ligand20 rdfs:subClassOf chebi:18420 . ?annotation23 faldo:begin ?pfsb24 ; faldo:end ?pfse25 ; up:ligand ?ligand26 ; rdf:type up:Binding_Site_Annotation . ?pfsb24 faldo:position ?thisPositionOn27 ; rdf:type faldo:ExactPosition . ?pfse25 faldo:position ?thisPositionOn28 ; rdf:type faldo:ExactPosition . ?ligand26 rdfs:subClassOf chebi:18420 . ?pfs29 up:annotation ?annotation30 . ?annotation30 faldo:begin ?pfsb31 ; faldo:end ?pfse32 ; rdf:type up:Active_Site_Annotation ; rdfs:comment 'Proton acceptor' . ?pfsb31 faldo:position ?thisPositionOn33 ; rdf:type faldo:ExactPosition . ?pfse32 faldo:position ?thisPositionOn34 ; rdf:type faldo:ExactPosition . ?pfs35 up:annotation ?annotation36 . ?annotation36 faldo:begin ?pfsb37 ; faldo:end ?pfse38 ; up:ligand ?ligand39 ; rdf:type up:Binding_Site_Annotation . ?pfsb37 faldo:position ?thisPositionOn40 ; rdf:type faldo:ExactPosition . ?pfse38 faldo:position ?thisPositionOn41 ; rdf:type faldo:ExactPosition . ?ligand39 rdfs:subClassOf chebi:30616 . ?pfs42 up:annotation ?annotation43 . ?annotation43 faldo:begin ?pfsb44 ; faldo:end ?pfse45 ; up:ligand ?ligand46 ; rdf:type up:Binding_Site_Annotation . ?pfsb44 faldo:position ?thisPositionOn47 ; rdf:type faldo:ExactPosition . ?pfse45 faldo:position ?thisPositionOn48 ; rdf:type faldo:ExactPosition . ?ligand46 rdfs:subClassOf chebi:57673 . ?pfs49 up:annotation ?annotation50 . ?annotation50 faldo:begin ?pfsb51 ; faldo:end ?pfse52 ; up:ligand ?ligand53 ; rdf:type up:Binding_Site_Annotation . ?pfsb51 faldo:position ?thisPositionOn54 ; rdf:type faldo:ExactPosition . ?pfse52 faldo:position ?thisPositionOn55 ; rdf:type faldo:ExactPosition . ?ligand53 rdfs:subClassOf chebi:30616 . ?pfs56 up:annotation ?annotation57 . ?annotation57 faldo:begin ?pfsb58 ; faldo:end ?pfse59 ; up:ligand ?ligand60 ; rdf:type up:Binding_Site_Annotation . ?pfsb58 faldo:position ?thisPositionOn61 ; rdf:type faldo:ExactPosition . ?pfse59 faldo:position ?thisPositionOn62 ; rdf:type faldo:ExactPosition . ?ligand60 rdfs:subClassOf chebi:30616 . ?pfs63 up:annotation ?annotation64 . ?annotation64 faldo:begin ?pfsb65 ; faldo:end ?pfse66 ; up:ligand ?ligand67 ; rdf:type up:Binding_Site_Annotation . ?pfsb65 faldo:position ?thisPositionOn68 ; rdf:type faldo:ExactPosition . ?pfse66 faldo:position ?thisPositionOn69 ; rdf:type faldo:ExactPosition . ?ligand67 rdfs:subClassOf chebi:30616 . ?pfs70 up:annotation ?annotation71 . ?annotation71 faldo:begin ?pfsb72 ; faldo:end ?pfse73 ; up:ligand ?ligand74 ; rdf:type up:Binding_Site_Annotation . ?pfsb72 faldo:position ?thisPositionOn75 ; rdf:type faldo:ExactPosition . ?pfse73 faldo:position ?thisPositionOn76 ; rdf:type faldo:ExactPosition . ?ligand74 rdfs:subClassOf chebi:30616 . ?pfs77 up:annotation ?annotation78 . ?annotation78 faldo:begin ?pfsb79 ; faldo:end ?pfse80 ; up:ligand ?ligand81 ; rdf:type up:Binding_Site_Annotation . ?pfsb79 faldo:position ?thisPositionOn82 ; rdf:type faldo:ExactPosition . ?pfse80 faldo:position ?thisPositionOn83 ; rdf:type faldo:ExactPosition . ?ligand81 rdfs:subClassOf chebi:57673 . ?pfs84 up:annotation ?annotation85 . ?annotation85 faldo:begin ?pfsb86 ; faldo:end ?pfse87 ; up:ligand ?ligand88 ; rdf:type up:Binding_Site_Annotation . ?pfsb86 faldo:position ?thisPositionOn89 ; rdf:type faldo:ExactPosition . ?pfse87 faldo:position ?thisPositionOn90 ; rdf:type faldo:ExactPosition . ?ligand88 rdfs:subClassOf chebi:30616 . ?pfs91 up:annotation ?annotation92 . ?annotation92 faldo:begin ?pfsb93 ; faldo:end ?pfse94 ; up:ligand ?ligand95 ; rdf:type up:Binding_Site_Annotation . ?pfsb93 faldo:position ?thisPositionOn96 ; rdf:type faldo:ExactPosition . ?pfse94 faldo:position ?thisPositionOn97 ; rdf:type faldo:ExactPosition . ?ligand95 rdfs:subClassOf chebi:30616 . ?pfs98 up:annotation ?annotation99 . ?annotation99 faldo:begin ?pfsb100 ; faldo:end ?pfse101 ; up:ligand ?ligand102 ; rdf:type up:Binding_Site_Annotation . ?pfsb100 faldo:position ?thisPositionOn103 ; rdf:type faldo:ExactPosition . ?pfse101 faldo:position ?thisPositionOn104 ; rdf:type faldo:ExactPosition . ?ligand102 rdfs:subClassOf chebi:30616 . ?pfs105 up:annotation ?annotation106 . ?annotation106 faldo:begin ?pfsb107 ; faldo:end ?pfse108 ; up:ligand ?ligand109 ; rdf:type up:Binding_Site_Annotation . ?pfsb107 faldo:position ?thisPositionOn110 ; rdf:type faldo:ExactPosition . ?pfse108 faldo:position ?thisPositionOn111 ; rdf:type faldo:ExactPosition . ?ligand109 rdfs:subClassOf chebi:57673 . ?pfs112 up:annotation ?annotation113 . ?annotation113 faldo:begin ?pfsb114 ; faldo:end ?pfse115 ; up:ligand ?ligand116 ; rdf:type up:Binding_Site_Annotation . ?pfsb114 faldo:position ?thisPositionOn117 ; rdf:type faldo:ExactPosition . ?pfse115 faldo:position ?thisPositionOn118 ; rdf:type faldo:ExactPosition . ?ligand116 rdfs:subClassOf chebi:57673 . ?pfs119 up:annotation ?annotation120 . ?annotation120 faldo:begin ?pfsb121 ; faldo:end ?pfse122 ; up:ligand ?ligand123 ; rdf:type up:Binding_Site_Annotation . ?pfsb121 faldo:position ?thisPositionOn124 ; rdf:type faldo:ExactPosition . ?pfse122 faldo:position ?thisPositionOn125 ; rdf:type faldo:ExactPosition . ?ligand123 rdfs:subClassOf chebi:57673 . ?pfs126 up:annotation ?annotation127 . ?annotation127 faldo:begin ?pfsb128 ; faldo:end ?pfse129 ; up:ligand ?ligand130 ; rdf:type up:Binding_Site_Annotation . ?pfsb128 faldo:position ?thisPositionOn131 ; rdf:type faldo:ExactPosition . ?pfse129 faldo:position ?thisPositionOn132 ; rdf:type faldo:ExactPosition . ?ligand130 rdfs:subClassOf chebi:30616 . ?pfs133 up:annotation ?annotation134 . ?annotation134 faldo:begin ?pfsb135 ; faldo:end ?pfse136 ; up:ligand ?ligand137 ; rdf:type up:Binding_Site_Annotation . ?pfsb135 faldo:position ?thisPositionOn138 ; rdf:type faldo:ExactPosition . ?pfse136 faldo:position ?thisPositionOn139 ; rdf:type faldo:ExactPosition . ?ligand137 rdfs:subClassOf chebi:57673 . ?pfs140 up:annotation ?annotation141 . ?annotation141 faldo:begin ?pfsb142 ; faldo:end ?pfse143 ; up:ligand ?ligand144 ; rdf:type up:Binding_Site_Annotation . ?pfsb142 faldo:position ?thisPositionOn145 ; rdf:type faldo:ExactPosition . ?pfse143 faldo:position ?thisPositionOn146 ; rdf:type faldo:ExactPosition . ?ligand144 rdfs:subClassOf chebi:29991 . ?pfs147 up:annotation ?annotation148 . ?annotation148 faldo:begin ?pfsb149 ; faldo:end ?pfse150 ; up:ligand ?ligand151 ; rdf:type up:Binding_Site_Annotation . ?pfsb149 faldo:position ?thisPositionOn152 ; rdf:type faldo:ExactPosition . ?pfse150 faldo:position ?thisPositionOn153 ; rdf:type faldo:ExactPosition . ?ligand151 rdfs:subClassOf chebi:29991 . ?pfs154 up:annotation ?annotation155 . ?annotation155 faldo:begin ?pfsb156 ; faldo:end ?pfse157 ; up:ligand ?ligand158 ; rdf:type up:Binding_Site_Annotation . ?pfsb156 faldo:position ?thisPositionOn159 ; rdf:type faldo:ExactPosition . ?pfse157 faldo:position ?thisPositionOn160 ; rdf:type faldo:ExactPosition . ?ligand158 rdfs:subClassOf chebi:29991 . ?pfs161 up:annotation ?annotation162 . ?annotation162 faldo:begin ?pfsb163 ; faldo:end ?pfse164 ; up:ligand ?ligand165 ; rdf:type up:Binding_Site_Annotation . ?pfsb163 faldo:position ?thisPositionOn166 ; rdf:type faldo:ExactPosition . ?pfse164 faldo:position ?thisPositionOn167 ; rdf:type faldo:ExactPosition . ?ligand165 rdfs:subClassOf chebi:30616 . ?pfs168 up:annotation ?annotation169 . ?annotation169 faldo:begin ?pfsb170 ; faldo:end ?pfse171 ; up:ligand ?ligand172 ; rdf:type up:Binding_Site_Annotation . ?pfsb170 faldo:position ?thisPositionOn173 ; rdf:type faldo:ExactPosition . ?pfse171 faldo:position ?thisPositionOn174 ; rdf:type faldo:ExactPosition . ?ligand172 rdfs:subClassOf chebi:30616 . ?pfs175 up:annotation ?annotation176 . ?annotation176 faldo:begin ?pfsb177 ; faldo:end ?pfse178 ; up:ligand ?ligand179 ; rdf:type up:Binding_Site_Annotation . ?pfsb177 faldo:position ?thisPositionOn180 ; rdf:type faldo:ExactPosition . ?pfse178 faldo:position ?thisPositionOn181 ; rdf:type faldo:ExactPosition . ?ligand179 rdfs:subClassOf chebi:30616 . _:971398 a rdf:Statement ; up:attribution _:971356 ; rdf:subject ?this ; rdf:predicate up:recommendedName ; rdf:object ?name0 . _:971399 a rdf:Statement ; up:attribution _:971357 ; rdf:subject ?this ; rdf:predicate up:alternativeName ; rdf:object ?name1 . _:971400 a rdf:Statement ; up:attribution _:971358 ; rdf:subject ?this ; rdf:predicate up:alternativeName ; rdf:object ?name2 . _:971401 a rdf:Statement ; up:attribution _:971359 ; rdf:subject ?gene3 ; rdf:predicate up:encodedBy ; rdf:object ?gene3 . _:971402 a rdf:Statement ; up:attribution _:971360 ; rdf:subject ?this ; rdf:predicate up:annotation ; rdf:object ?annotation4 . _:971403 a rdf:Statement ; up:attribution _:971361 ; rdf:subject ?this ; rdf:predicate up:annotation ; rdf:object ?annotation5 . _:971404 a rdf:Statement ; up:attribution _:971362 ; rdf:subject ?this ; rdf:predicate up:annotation ; rdf:object ?annotation7 . _:971405 a rdf:Statement ; up:attribution _:971363 ; rdf:subject ?this ; rdf:predicate up:annotation ; rdf:object ?annotation8 . _:971406 a rdf:Statement ; up:attribution _:971364 ; rdf:subject ?this ; rdf:predicate up:classifiedWith ; rdf:object keyword:67 . _:971407 a rdf:Statement ; up:attribution _:971365 ; rdf:subject ?this ; rdf:predicate up:classifiedWith ; rdf:object keyword:436 . _:971408 a rdf:Statement ; up:attribution _:971366 ; rdf:subject ?this ; rdf:predicate up:classifiedWith ; rdf:object keyword:460 . _:971409 a rdf:Statement ; up:attribution _:971367 ; rdf:subject ?this ; rdf:predicate up:classifiedWith ; rdf:object keyword:479 . _:971410 a rdf:Statement ; up:attribution _:971368 ; rdf:subject ?this ; rdf:predicate up:classifiedWith ; rdf:object keyword:547 . _:971411 a rdf:Statement ; up:attribution _:971369 ; rdf:subject ?this ; rdf:predicate up:classifiedWith ; rdf:object keyword:658 . _:971412 a rdf:Statement ; up:attribution _:971370 ; rdf:subject ?this ; rdf:predicate up:classifiedWith ; rdf:object GO:0005524 . _:971413 a rdf:Statement ; up:attribution _:971371 ; rdf:subject ?this ; rdf:predicate up:classifiedWith ; rdf:object GO:0000287 . _:971414 a rdf:Statement ; up:attribution _:971372 ; rdf:subject ?this ; rdf:predicate up:classifiedWith ; rdf:object GO:0006164 . _:971415 a rdf:Statement ; up:source unirule:MF_04166 ; rdf:subject ?pfs10 ; rdf:predicate up:annotation ; rdf:object ?annotation11 . _:971416 a rdf:Statement ; up:attribution _:971373 ; rdf:subject ?pfs10 ; rdf:predicate up:annotation ; rdf:object ?annotation11 . _:971417 a rdf:Statement ; up:source unirule:MF_04166 ; rdf:subject ?pfs10 ; rdf:predicate up:annotation ; rdf:object ?annotation17 . _:971418 a rdf:Statement ; up:attribution _:971374 ; rdf:subject ?pfs10 ; rdf:predicate up:annotation ; rdf:object ?annotation17 . _:971419 a rdf:Statement ; up:source unirule:MF_04166 ; rdf:subject ?pfs10 ; rdf:predicate up:annotation ; rdf:object ?annotation23 . _:971420 a rdf:Statement ; up:attribution _:971375 ; rdf:subject ?pfs10 ; rdf:predicate up:annotation ; rdf:object ?annotation23 . _:971421 a rdf:Statement ; up:source unirule:MF_04166 ; rdf:subject ?pfs29 ; rdf:predicate up:annotation ; rdf:object ?annotation30 . _:971422 a rdf:Statement ; up:attribution _:971376 ; rdf:subject ?pfs29 ; rdf:predicate up:annotation ; rdf:object ?annotation30 . _:971423 a rdf:Statement ; up:source unirule:MF_04166 ; rdf:subject ?pfs35 ; rdf:predicate up:annotation ; rdf:object ?annotation36 . _:971424 a rdf:Statement ; up:attribution _:971377 ; rdf:subject ?pfs35 ; rdf:predicate up:annotation ; rdf:object ?annotation36 . _:971425 a rdf:Statement ; up:source unirule:MF_04166 ; rdf:subject ?pfs42 ; rdf:predicate up:annotation ; rdf:object ?annotation43 . _:971426 a rdf:Statement ; up:attribution _:971378 ; rdf:subject ?pfs42 ; rdf:predicate up:annotation ; rdf:object ?annotation43 . _:971427 a rdf:Statement ; up:source unirule:MF_04166 ; rdf:subject ?pfs49 ; rdf:predicate up:annotation ; rdf:object ?annotation50 . _:971428 a rdf:Statement ; up:attribution _:971379 ; rdf:subject ?pfs49 ; rdf:predicate up:annotation ; rdf:object ?annotation50 . _:971429 a rdf:Statement ; up:source unirule:MF_04166 ; rdf:subject ?pfs56 ; rdf:predicate up:annotation ; rdf:object ?annotation57 . _:971430 a rdf:Statement ; up:attribution _:971380 ; rdf:subject ?pfs56 ; rdf:predicate up:annotation ; rdf:object ?annotation57 . _:971431 a rdf:Statement ; up:source unirule:MF_04166 ; rdf:subject ?pfs63 ; rdf:predicate up:annotation ; rdf:object ?annotation64 . _:971432 a rdf:Statement ; up:attribution _:971381 ; rdf:subject ?pfs63 ; rdf:predicate up:annotation ; rdf:object ?annotation64 . _:971433 a rdf:Statement ; up:source unirule:MF_04166 ; rdf:subject ?pfs70 ; rdf:predicate up:annotation ; rdf:object ?annotation71 . _:971434 a rdf:Statement ; up:attribution _:971382 ; rdf:subject ?pfs70 ; rdf:predicate up:annotation ; rdf:object ?annotation71 . _:971435 a rdf:Statement ; up:source unirule:MF_04166 ; rdf:subject ?pfs77 ; rdf:predicate up:annotation ; rdf:object ?annotation78 . _:971436 a rdf:Statement ; up:attribution _:971383 ; rdf:subject ?pfs77 ; rdf:predicate up:annotation ; rdf:object ?annotation78 . _:971437 a rdf:Statement ; up:source unirule:MF_04166 ; rdf:subject ?pfs84 ; rdf:predicate up:annotation ; rdf:object ?annotation85 . _:971438 a rdf:Statement ; up:attribution _:971384 ; rdf:subject ?pfs84 ; rdf:predicate up:annotation ; rdf:object ?annotation85 . _:971439 a rdf:Statement ; up:source unirule:MF_04166 ; rdf:subject ?pfs91 ; rdf:predicate up:annotation ; rdf:object ?annotation92 . _:971440 a rdf:Statement ; up:attribution _:971385 ; rdf:subject ?pfs91 ; rdf:predicate up:annotation ; rdf:object ?annotation92 . _:971441 a rdf:Statement ; up:source unirule:MF_04166 ; rdf:subject ?pfs98 ; rdf:predicate up:annotation ; rdf:object ?annotation99 . _:971442 a rdf:Statement ; up:attribution _:971386 ; rdf:subject ?pfs98 ; rdf:predicate up:annotation ; rdf:object ?annotation99 . _:971443 a rdf:Statement ; up:source unirule:MF_04166 ; rdf:subject ?pfs105 ; rdf:predicate up:annotation ; rdf:object ?annotation106 . _:971444 a rdf:Statement ; up:attribution _:971387 ; rdf:subject ?pfs105 ; rdf:predicate up:annotation ; rdf:object ?annotation106 . _:971445 a rdf:Statement ; up:source unirule:MF_04166 ; rdf:subject ?pfs112 ; rdf:predicate up:annotation ; rdf:object ?annotation113 . _:971446 a rdf:Statement ; up:attribution _:971388 ; rdf:subject ?pfs112 ; rdf:predicate up:annotation ; rdf:object ?annotation113 . _:971447 a rdf:Statement ; up:source unirule:MF_04166 ; rdf:subject ?pfs119 ; rdf:predicate up:annotation ; rdf:object ?annotation120 . _:971448 a rdf:Statement ; up:attribution _:971389 ; rdf:subject ?pfs119 ; rdf:predicate up:annotation ; rdf:object ?annotation120 . _:971449 a rdf:Statement ; up:source unirule:MF_04166 ; rdf:subject ?pfs126 ; rdf:predicate up:annotation ; rdf:object ?annotation127 . _:971450 a rdf:Statement ; up:attribution _:971390 ; rdf:subject ?pfs126 ; rdf:predicate up:annotation ; rdf:object ?annotation127 . _:971451 a rdf:Statement ; up:source unirule:MF_04166 ; rdf:subject ?pfs133 ; rdf:predicate up:annotation ; rdf:object ?annotation134 . _:971452 a rdf:Statement ; up:attribution _:971391 ; rdf:subject ?pfs133 ; rdf:predicate up:annotation ; rdf:object ?annotation134 . _:971453 a rdf:Statement ; up:source unirule:MF_04166 ; rdf:subject ?pfs140 ; rdf:predicate up:annotation ; rdf:object ?annotation141 . _:971454 a rdf:Statement ; up:attribution _:971392 ; rdf:subject ?pfs140 ; rdf:predicate up:annotation ; rdf:object ?annotation141 . _:971455 a rdf:Statement ; up:source unirule:MF_04166 ; rdf:subject ?pfs147 ; rdf:predicate up:annotation ; rdf:object ?annotation148 . _:971456 a rdf:Statement ; up:attribution _:971393 ; rdf:subject ?pfs147 ; rdf:predicate up:annotation ; rdf:object ?annotation148 . _:971457 a rdf:Statement ; up:source unirule:MF_04166 ; rdf:subject ?pfs154 ; rdf:predicate up:annotation ; rdf:object ?annotation155 . _:971458 a rdf:Statement ; up:attribution _:971394 ; rdf:subject ?pfs154 ; rdf:predicate up:annotation ; rdf:object ?annotation155 . _:971459 a rdf:Statement ; up:source unirule:MF_04166 ; rdf:subject ?pfs161 ; rdf:predicate up:annotation ; rdf:object ?annotation162 . _:971460 a rdf:Statement ; up:attribution _:971395 ; rdf:subject ?pfs161 ; rdf:predicate up:annotation ; rdf:object ?annotation162 . _:971461 a rdf:Statement ; up:source unirule:MF_04166 ; rdf:subject ?pfs168 ; rdf:predicate up:annotation ; rdf:object ?annotation169 . _:971462 a rdf:Statement ; up:attribution _:971396 ; rdf:subject ?pfs168 ; rdf:predicate up:annotation ; rdf:object ?annotation169 . _:971463 a rdf:Statement ; up:source unirule:MF_04166 ; rdf:subject ?pfs175 ; rdf:predicate up:annotation ; rdf:object ?annotation176 . _:971464 a rdf:Statement ; up:attribution _:971397 ; rdf:subject ?pfs175 ; rdf:predicate up:annotation ; rdf:object ?annotation176 . } WHERE { #baseURI: http://purl.uniprot.org/unirule/MF_04166 #Rule MF_04166 Created by:chulo on:2021-06-03 Modified by:ecoudert on:2022-09-01 ?this up:organism ?thisOrganism ; rdfs:seeAlso signature:MF_04166 . ?thisOrganism rdfs:subClassOf+ taxon:2731619 . BIND(URI(CONCAT(STR(?this), '#MF_04166a0')) AS ?name0) . BIND(URI(CONCAT(STR(?this), '#MF_04166a1')) AS ?name1) . BIND(URI(CONCAT(STR(?this), '#MF_04166a2')) AS ?name2) . BIND(URI(CONCAT(STR(?this), '#MF_04166a4')) AS ?annotation4) . BIND(URI(CONCAT(STR(?this), '#MF_04166a5')) AS ?annotation5) . BIND(URI(CONCAT(STR(?this), '#MF_04166a7')) AS ?annotation7) . BIND(URI(CONCAT(STR(?this), '#MF_04166a8')) AS ?annotation8) . OPTIONAL { ?this up:sequence ?thisSequence . ?thisSequence rdf:value ?thisSequenceValue . ?templateMotifMatch186 faldo:location ?templateMotifSequenceMatchRegionG3FFN6187 ; edam:is_output_of ?templateMotifSequenceProfileAlignmentOperationG3FFN6189 ; rdf:type edam:data_0869 ; rdf:value ?templateMotifCigarG3FFN6MF_04166182 . ?templateMotifSequenceMatchRegionG3FFN6187 faldo:begin ?templateMotifSequenceMatchBeginG3FFN6188 . ?templateMotifSequenceMatchBeginG3FFN6188 faldo:position ?templateMotifSequenceMatchBeginPositionG3FFN6183 ; faldo:reference isoform:G3FFN6-1 . ?templateMotifSequenceProfileAlignmentOperationG3FFN6189 edam:has_input signature:MF_04166 ; rdf:type edam:operation_0300 . ?targetMotifMatch190 faldo:location ?targetMotifMatchRegionMatch191 ; edam:is_output_of ?targetMotifSequenceAlignmentOperationMF_04166193 ; rdf:type edam:data_0869 ; rdf:value ?targetMotifMatchCigarG3FFN6MF_04166184 . ?targetMotifMatchRegionMatch191 faldo:begin ?targetMotifMatchRegionMatchBeginMF_04166192 . ?targetMotifMatchRegionMatchBeginMF_04166192 faldo:position ?targetMotifMatchRegionMatchBeginPositionMF_04166185 ; faldo:reference ?thisSequence . ?targetMotifSequenceAlignmentOperationMF_04166193 edam:has_input signature:MF_04166 ; rdf:type edam:operation_0300 . BIND(?this AS ?tagFTGRP_1) . BIND(STRLEN(REPLACE(SUBSTR(?templateMotifCigarG3FFN6MF_04166182, 1, (STRLEN(?templateMotifCigarG3FFN6MF_04166182) - STRLEN(REPLACE(?templateMotifCigarG3FFN6MF_04166182, CONCAT('^(?:-*[^-]){', STR(((14 - ?templateMotifSequenceMatchBeginPositionG3FFN6183) + 1)), '}'), '')))), '[a-z]', '')) AS ?step1194) . BIND((STRLEN(SUBSTR(?targetMotifMatchCigarG3FFN6MF_04166184, 1, (STRLEN(?targetMotifMatchCigarG3FFN6MF_04166184) - STRLEN(REPLACE(?targetMotifMatchCigarG3FFN6MF_04166184, CONCAT('^(?:[a-z]*(?:[A-Z]|-)){', STR(?step1194), '}'), ''))))) - STRLEN(REPLACE(SUBSTR(?targetMotifMatchCigarG3FFN6MF_04166184, 1, (STRLEN(?targetMotifMatchCigarG3FFN6MF_04166184) - STRLEN(REPLACE(?targetMotifMatchCigarG3FFN6MF_04166184, CONCAT('^(?:[a-z]*(?:[A-Z]|-)){', STR(?step1194), '}'), '')))), '[^-]', ''))) AS ?step2195) . BIND(((?step2195 + ?targetMotifMatchRegionMatchBeginPositionMF_04166185) - 1) AS ?thisPositionOn15) . BIND(?thisPositionOn15 AS ?thisPositionOn16) . BIND(?this AS ?pfs1t196) . BIND(URI(CONCAT(STR(?thisSequence), '#position', STR(?thisPositionOn15))) AS ?pfsb12) . BIND(URI(CONCAT(STR(?thisSequence), '#position', STR(?thisPositionOn16))) AS ?pfse13) . FILTER ((SUBSTR(?thisSequenceValue, ?thisPositionOn15, 1) = 'S')) . BIND(STRLEN(REPLACE(SUBSTR(?templateMotifCigarG3FFN6MF_04166182, 1, (STRLEN(?templateMotifCigarG3FFN6MF_04166182) - STRLEN(REPLACE(?templateMotifCigarG3FFN6MF_04166182, CONCAT('^(?:-*[^-]){', STR(((42 - ?templateMotifSequenceMatchBeginPositionG3FFN6183) + 1)), '}'), '')))), '[a-z]', '')) AS ?step1197) . BIND((STRLEN(SUBSTR(?targetMotifMatchCigarG3FFN6MF_04166184, 1, (STRLEN(?targetMotifMatchCigarG3FFN6MF_04166184) - STRLEN(REPLACE(?targetMotifMatchCigarG3FFN6MF_04166184, CONCAT('^(?:[a-z]*(?:[A-Z]|-)){', STR(?step1197), '}'), ''))))) - STRLEN(REPLACE(SUBSTR(?targetMotifMatchCigarG3FFN6MF_04166184, 1, (STRLEN(?targetMotifMatchCigarG3FFN6MF_04166184) - STRLEN(REPLACE(?targetMotifMatchCigarG3FFN6MF_04166184, CONCAT('^(?:[a-z]*(?:[A-Z]|-)){', STR(?step1197), '}'), '')))), '[^-]', ''))) AS ?step2198) . BIND(((?step2198 + ?targetMotifMatchRegionMatchBeginPositionMF_04166185) - 1) AS ?thisPositionOn21) . BIND(?thisPositionOn21 AS ?thisPositionOn22) . BIND(?this AS ?pfs1t199) . BIND(URI(CONCAT(STR(?thisSequence), '#position', STR(?thisPositionOn21))) AS ?pfsb18) . BIND(URI(CONCAT(STR(?thisSequence), '#position', STR(?thisPositionOn22))) AS ?pfse19) . FILTER ((SUBSTR(?thisSequenceValue, ?thisPositionOn21, 1) = 'G')) . BIND(STRLEN(REPLACE(SUBSTR(?templateMotifCigarG3FFN6MF_04166182, 1, (STRLEN(?templateMotifCigarG3FFN6MF_04166182) - STRLEN(REPLACE(?templateMotifCigarG3FFN6MF_04166182, CONCAT('^(?:-*[^-]){', STR(((263 - ?templateMotifSequenceMatchBeginPositionG3FFN6183) + 1)), '}'), '')))), '[a-z]', '')) AS ?step1200) . BIND((STRLEN(SUBSTR(?targetMotifMatchCigarG3FFN6MF_04166184, 1, (STRLEN(?targetMotifMatchCigarG3FFN6MF_04166184) - STRLEN(REPLACE(?targetMotifMatchCigarG3FFN6MF_04166184, CONCAT('^(?:[a-z]*(?:[A-Z]|-)){', STR(?step1200), '}'), ''))))) - STRLEN(REPLACE(SUBSTR(?targetMotifMatchCigarG3FFN6MF_04166184, 1, (STRLEN(?targetMotifMatchCigarG3FFN6MF_04166184) - STRLEN(REPLACE(?targetMotifMatchCigarG3FFN6MF_04166184, CONCAT('^(?:[a-z]*(?:[A-Z]|-)){', STR(?step1200), '}'), '')))), '[^-]', ''))) AS ?step2201) . BIND(((?step2201 + ?targetMotifMatchRegionMatchBeginPositionMF_04166185) - 1) AS ?thisPositionOn27) . BIND(?thisPositionOn27 AS ?thisPositionOn28) . BIND(?this AS ?pfs1t202) . BIND(URI(CONCAT(STR(?thisSequence), '#position', STR(?thisPositionOn27))) AS ?pfsb24) . BIND(URI(CONCAT(STR(?thisSequence), '#position', STR(?thisPositionOn28))) AS ?pfse25) . FILTER ((SUBSTR(?thisSequenceValue, ?thisPositionOn27, 1) = 'T')) . BIND(?this AS ?pfs10) . } OPTIONAL { ?this up:sequence ?thisSequence . ?thisSequence rdf:value ?thisSequenceValue . ?templateMotifMatch207 faldo:location ?templateMotifSequenceMatchRegionG3FFN6208 ; edam:is_output_of ?templateMotifSequenceProfileAlignmentOperationG3FFN6210 ; rdf:type edam:data_0869 ; rdf:value ?templateMotifCigarG3FFN6MF_04166203 . ?templateMotifSequenceMatchRegionG3FFN6208 faldo:begin ?templateMotifSequenceMatchBeginG3FFN6209 . ?templateMotifSequenceMatchBeginG3FFN6209 faldo:position ?templateMotifSequenceMatchBeginPositionG3FFN6204 ; faldo:reference isoform:G3FFN6-1 . ?templateMotifSequenceProfileAlignmentOperationG3FFN6210 edam:has_input signature:MF_04166 ; rdf:type edam:operation_0300 . ?targetMotifMatch211 faldo:location ?targetMotifMatchRegionMatch212 ; edam:is_output_of ?targetMotifSequenceAlignmentOperationMF_04166214 ; rdf:type edam:data_0869 ; rdf:value ?targetMotifMatchCigarG3FFN6MF_04166205 . ?targetMotifMatchRegionMatch212 faldo:begin ?targetMotifMatchRegionMatchBeginMF_04166213 . ?targetMotifMatchRegionMatchBeginMF_04166213 faldo:position ?targetMotifMatchRegionMatchBeginPositionMF_04166206 ; faldo:reference ?thisSequence . ?targetMotifSequenceAlignmentOperationMF_04166214 edam:has_input signature:MF_04166 ; rdf:type edam:operation_0300 . BIND(STRLEN(REPLACE(SUBSTR(?templateMotifCigarG3FFN6MF_04166203, 1, (STRLEN(?templateMotifCigarG3FFN6MF_04166203) - STRLEN(REPLACE(?templateMotifCigarG3FFN6MF_04166203, CONCAT('^(?:-*[^-]){', STR(((14 - ?templateMotifSequenceMatchBeginPositionG3FFN6204) + 1)), '}'), '')))), '[a-z]', '')) AS ?step1215) . BIND((STRLEN(SUBSTR(?targetMotifMatchCigarG3FFN6MF_04166205, 1, (STRLEN(?targetMotifMatchCigarG3FFN6MF_04166205) - STRLEN(REPLACE(?targetMotifMatchCigarG3FFN6MF_04166205, CONCAT('^(?:[a-z]*(?:[A-Z]|-)){', STR(?step1215), '}'), ''))))) - STRLEN(REPLACE(SUBSTR(?targetMotifMatchCigarG3FFN6MF_04166205, 1, (STRLEN(?targetMotifMatchCigarG3FFN6MF_04166205) - STRLEN(REPLACE(?targetMotifMatchCigarG3FFN6MF_04166205, CONCAT('^(?:[a-z]*(?:[A-Z]|-)){', STR(?step1215), '}'), '')))), '[^-]', ''))) AS ?step2216) . BIND(((?step2216 + ?targetMotifMatchRegionMatchBeginPositionMF_04166206) - 1) AS ?thisPositionOn33) . BIND(?thisPositionOn33 AS ?thisPositionOn34) . BIND(?this AS ?pfs2t217) . BIND(URI(CONCAT(STR(?thisSequence), '#position', STR(?thisPositionOn33))) AS ?pfsb31) . BIND(URI(CONCAT(STR(?thisSequence), '#position', STR(?thisPositionOn34))) AS ?pfse32) . FILTER ((SUBSTR(?thisSequenceValue, ?thisPositionOn33, 1) = 'S')) . BIND(URI(CONCAT(STR(?this), '#MF_04166a30')) AS ?annotation30) . BIND(?this AS ?pfs29) . } OPTIONAL { ?this up:sequence ?thisSequence . ?thisSequence rdf:value ?thisSequenceValue . ?templateMotifMatch222 faldo:location ?templateMotifSequenceMatchRegionG3FFN6223 ; edam:is_output_of ?templateMotifSequenceProfileAlignmentOperationG3FFN6225 ; rdf:type edam:data_0869 ; rdf:value ?templateMotifCigarG3FFN6MF_04166218 . ?templateMotifSequenceMatchRegionG3FFN6223 faldo:begin ?templateMotifSequenceMatchBeginG3FFN6224 . ?templateMotifSequenceMatchBeginG3FFN6224 faldo:position ?templateMotifSequenceMatchBeginPositionG3FFN6219 ; faldo:reference isoform:G3FFN6-1 . ?templateMotifSequenceProfileAlignmentOperationG3FFN6225 edam:has_input signature:MF_04166 ; rdf:type edam:operation_0300 . ?targetMotifMatch226 faldo:location ?targetMotifMatchRegionMatch227 ; edam:is_output_of ?targetMotifSequenceAlignmentOperationMF_04166229 ; rdf:type edam:data_0869 ; rdf:value ?targetMotifMatchCigarG3FFN6MF_04166220 . ?targetMotifMatchRegionMatch227 faldo:begin ?targetMotifMatchRegionMatchBeginMF_04166228 . ?targetMotifMatchRegionMatchBeginMF_04166228 faldo:position ?targetMotifMatchRegionMatchBeginPositionMF_04166221 ; faldo:reference ?thisSequence . ?targetMotifSequenceAlignmentOperationMF_04166229 edam:has_input signature:MF_04166 ; rdf:type edam:operation_0300 . BIND(STRLEN(REPLACE(SUBSTR(?templateMotifCigarG3FFN6MF_04166218, 1, (STRLEN(?templateMotifCigarG3FFN6MF_04166218) - STRLEN(REPLACE(?templateMotifCigarG3FFN6MF_04166218, CONCAT('^(?:-*[^-]){', STR(((14 - ?templateMotifSequenceMatchBeginPositionG3FFN6219) + 1)), '}'), '')))), '[a-z]', '')) AS ?step1230) . BIND((STRLEN(SUBSTR(?targetMotifMatchCigarG3FFN6MF_04166220, 1, (STRLEN(?targetMotifMatchCigarG3FFN6MF_04166220) - STRLEN(REPLACE(?targetMotifMatchCigarG3FFN6MF_04166220, CONCAT('^(?:[a-z]*(?:[A-Z]|-)){', STR(?step1230), '}'), ''))))) - STRLEN(REPLACE(SUBSTR(?targetMotifMatchCigarG3FFN6MF_04166220, 1, (STRLEN(?targetMotifMatchCigarG3FFN6MF_04166220) - STRLEN(REPLACE(?targetMotifMatchCigarG3FFN6MF_04166220, CONCAT('^(?:[a-z]*(?:[A-Z]|-)){', STR(?step1230), '}'), '')))), '[^-]', ''))) AS ?step2231) . BIND(((?step2231 + ?targetMotifMatchRegionMatchBeginPositionMF_04166221) - 1) AS ?thisPositionOn40) . BIND(?thisPositionOn40 AS ?thisPositionOn41) . BIND(?this AS ?pfs2t232) . BIND(URI(CONCAT(STR(?thisSequence), '#position', STR(?thisPositionOn40))) AS ?pfsb37) . BIND(URI(CONCAT(STR(?thisSequence), '#position', STR(?thisPositionOn41))) AS ?pfse38) . FILTER ((SUBSTR(?thisSequenceValue, ?thisPositionOn40, 1) = 'S')) . BIND(URI(CONCAT(STR(?this), '#MF_04166a36')) AS ?annotation36) . BIND(?this AS ?pfs35) . } OPTIONAL { ?this up:sequence ?thisSequence . ?thisSequence rdf:value ?thisSequenceValue . ?templateMotifMatch237 faldo:location ?templateMotifSequenceMatchRegionG3FFN6238 ; edam:is_output_of ?templateMotifSequenceProfileAlignmentOperationG3FFN6240 ; rdf:type edam:data_0869 ; rdf:value ?templateMotifCigarG3FFN6MF_04166233 . ?templateMotifSequenceMatchRegionG3FFN6238 faldo:begin ?templateMotifSequenceMatchBeginG3FFN6239 . ?templateMotifSequenceMatchBeginG3FFN6239 faldo:position ?templateMotifSequenceMatchBeginPositionG3FFN6234 ; faldo:reference isoform:G3FFN6-1 . ?templateMotifSequenceProfileAlignmentOperationG3FFN6240 edam:has_input signature:MF_04166 ; rdf:type edam:operation_0300 . ?targetMotifMatch241 faldo:location ?targetMotifMatchRegionMatch242 ; edam:is_output_of ?targetMotifSequenceAlignmentOperationMF_04166244 ; rdf:type edam:data_0869 ; rdf:value ?targetMotifMatchCigarG3FFN6MF_04166235 . ?targetMotifMatchRegionMatch242 faldo:begin ?targetMotifMatchRegionMatchBeginMF_04166243 . ?targetMotifMatchRegionMatchBeginMF_04166243 faldo:position ?targetMotifMatchRegionMatchBeginPositionMF_04166236 ; faldo:reference ?thisSequence . ?targetMotifSequenceAlignmentOperationMF_04166244 edam:has_input signature:MF_04166 ; rdf:type edam:operation_0300 . BIND(STRLEN(REPLACE(SUBSTR(?templateMotifCigarG3FFN6MF_04166233, 1, (STRLEN(?templateMotifCigarG3FFN6MF_04166233) - STRLEN(REPLACE(?templateMotifCigarG3FFN6MF_04166233, CONCAT('^(?:-*[^-]){', STR(((14 - ?templateMotifSequenceMatchBeginPositionG3FFN6234) + 1)), '}'), '')))), '[a-z]', '')) AS ?step1245) . BIND((STRLEN(SUBSTR(?targetMotifMatchCigarG3FFN6MF_04166235, 1, (STRLEN(?targetMotifMatchCigarG3FFN6MF_04166235) - STRLEN(REPLACE(?targetMotifMatchCigarG3FFN6MF_04166235, CONCAT('^(?:[a-z]*(?:[A-Z]|-)){', STR(?step1245), '}'), ''))))) - STRLEN(REPLACE(SUBSTR(?targetMotifMatchCigarG3FFN6MF_04166235, 1, (STRLEN(?targetMotifMatchCigarG3FFN6MF_04166235) - STRLEN(REPLACE(?targetMotifMatchCigarG3FFN6MF_04166235, CONCAT('^(?:[a-z]*(?:[A-Z]|-)){', STR(?step1245), '}'), '')))), '[^-]', ''))) AS ?step2246) . BIND(((?step2246 + ?targetMotifMatchRegionMatchBeginPositionMF_04166236) - 1) AS ?thisPositionOn47) . BIND(?thisPositionOn47 AS ?thisPositionOn48) . BIND(?this AS ?pfs2t247) . BIND(URI(CONCAT(STR(?thisSequence), '#position', STR(?thisPositionOn47))) AS ?pfsb44) . BIND(URI(CONCAT(STR(?thisSequence), '#position', STR(?thisPositionOn48))) AS ?pfse45) . FILTER ((SUBSTR(?thisSequenceValue, ?thisPositionOn47, 1) = 'S')) . BIND(URI(CONCAT(STR(?this), '#MF_04166a43')) AS ?annotation43) . BIND(?this AS ?pfs42) . } OPTIONAL { ?this up:sequence ?thisSequence . ?thisSequence rdf:value ?thisSequenceValue . ?templateMotifMatch252 faldo:location ?templateMotifSequenceMatchRegionG3FFN6253 ; edam:is_output_of ?templateMotifSequenceProfileAlignmentOperationG3FFN6255 ; rdf:type edam:data_0869 ; rdf:value ?templateMotifCigarG3FFN6MF_04166248 . ?templateMotifSequenceMatchRegionG3FFN6253 faldo:begin ?templateMotifSequenceMatchBeginG3FFN6254 . ?templateMotifSequenceMatchBeginG3FFN6254 faldo:position ?templateMotifSequenceMatchBeginPositionG3FFN6249 ; faldo:reference isoform:G3FFN6-1 . ?templateMotifSequenceProfileAlignmentOperationG3FFN6255 edam:has_input signature:MF_04166 ; rdf:type edam:operation_0300 . ?targetMotifMatch256 faldo:location ?targetMotifMatchRegionMatch257 ; edam:is_output_of ?targetMotifSequenceAlignmentOperationMF_04166259 ; rdf:type edam:data_0869 ; rdf:value ?targetMotifMatchCigarG3FFN6MF_04166250 . ?targetMotifMatchRegionMatch257 faldo:begin ?targetMotifMatchRegionMatchBeginMF_04166258 . ?targetMotifMatchRegionMatchBeginMF_04166258 faldo:position ?targetMotifMatchRegionMatchBeginPositionMF_04166251 ; faldo:reference ?thisSequence . ?targetMotifSequenceAlignmentOperationMF_04166259 edam:has_input signature:MF_04166 ; rdf:type edam:operation_0300 . BIND(STRLEN(REPLACE(SUBSTR(?templateMotifCigarG3FFN6MF_04166248, 1, (STRLEN(?templateMotifCigarG3FFN6MF_04166248) - STRLEN(REPLACE(?templateMotifCigarG3FFN6MF_04166248, CONCAT('^(?:-*[^-]){', STR(((15 - ?templateMotifSequenceMatchBeginPositionG3FFN6249) + 1)), '}'), '')))), '[a-z]', '')) AS ?step1260) . BIND((STRLEN(SUBSTR(?targetMotifMatchCigarG3FFN6MF_04166250, 1, (STRLEN(?targetMotifMatchCigarG3FFN6MF_04166250) - STRLEN(REPLACE(?targetMotifMatchCigarG3FFN6MF_04166250, CONCAT('^(?:[a-z]*(?:[A-Z]|-)){', STR(?step1260), '}'), ''))))) - STRLEN(REPLACE(SUBSTR(?targetMotifMatchCigarG3FFN6MF_04166250, 1, (STRLEN(?targetMotifMatchCigarG3FFN6MF_04166250) - STRLEN(REPLACE(?targetMotifMatchCigarG3FFN6MF_04166250, CONCAT('^(?:[a-z]*(?:[A-Z]|-)){', STR(?step1260), '}'), '')))), '[^-]', ''))) AS ?step2261) . BIND(((?step2261 + ?targetMotifMatchRegionMatchBeginPositionMF_04166251) - 1) AS ?thisPositionOn54) . BIND(?thisPositionOn54 AS ?thisPositionOn55) . BIND(?this AS ?pfs2t262) . BIND(URI(CONCAT(STR(?thisSequence), '#position', STR(?thisPositionOn54))) AS ?pfsb51) . BIND(URI(CONCAT(STR(?thisSequence), '#position', STR(?thisPositionOn55))) AS ?pfse52) . FILTER ((SUBSTR(?thisSequenceValue, ?thisPositionOn54, 1) = 'T')) . BIND(URI(CONCAT(STR(?this), '#MF_04166a50')) AS ?annotation50) . BIND(?this AS ?pfs49) . } OPTIONAL { ?this up:sequence ?thisSequence . ?thisSequence rdf:value ?thisSequenceValue . ?templateMotifMatch267 faldo:location ?templateMotifSequenceMatchRegionG3FFN6268 ; edam:is_output_of ?templateMotifSequenceProfileAlignmentOperationG3FFN6270 ; rdf:type edam:data_0869 ; rdf:value ?templateMotifCigarG3FFN6MF_04166263 . ?templateMotifSequenceMatchRegionG3FFN6268 faldo:begin ?templateMotifSequenceMatchBeginG3FFN6269 . ?templateMotifSequenceMatchBeginG3FFN6269 faldo:position ?templateMotifSequenceMatchBeginPositionG3FFN6264 ; faldo:reference isoform:G3FFN6-1 . ?templateMotifSequenceProfileAlignmentOperationG3FFN6270 edam:has_input signature:MF_04166 ; rdf:type edam:operation_0300 . ?targetMotifMatch271 faldo:location ?targetMotifMatchRegionMatch272 ; edam:is_output_of ?targetMotifSequenceAlignmentOperationMF_04166274 ; rdf:type edam:data_0869 ; rdf:value ?targetMotifMatchCigarG3FFN6MF_04166265 . ?targetMotifMatchRegionMatch272 faldo:begin ?targetMotifMatchRegionMatchBeginMF_04166273 . ?targetMotifMatchRegionMatchBeginMF_04166273 faldo:position ?targetMotifMatchRegionMatchBeginPositionMF_04166266 ; faldo:reference ?thisSequence . ?targetMotifSequenceAlignmentOperationMF_04166274 edam:has_input signature:MF_04166 ; rdf:type edam:operation_0300 . BIND(STRLEN(REPLACE(SUBSTR(?templateMotifCigarG3FFN6MF_04166263, 1, (STRLEN(?templateMotifCigarG3FFN6MF_04166263) - STRLEN(REPLACE(?templateMotifCigarG3FFN6MF_04166263, CONCAT('^(?:-*[^-]){', STR(((16 - ?templateMotifSequenceMatchBeginPositionG3FFN6264) + 1)), '}'), '')))), '[a-z]', '')) AS ?step1275) . BIND((STRLEN(SUBSTR(?targetMotifMatchCigarG3FFN6MF_04166265, 1, (STRLEN(?targetMotifMatchCigarG3FFN6MF_04166265) - STRLEN(REPLACE(?targetMotifMatchCigarG3FFN6MF_04166265, CONCAT('^(?:[a-z]*(?:[A-Z]|-)){', STR(?step1275), '}'), ''))))) - STRLEN(REPLACE(SUBSTR(?targetMotifMatchCigarG3FFN6MF_04166265, 1, (STRLEN(?targetMotifMatchCigarG3FFN6MF_04166265) - STRLEN(REPLACE(?targetMotifMatchCigarG3FFN6MF_04166265, CONCAT('^(?:[a-z]*(?:[A-Z]|-)){', STR(?step1275), '}'), '')))), '[^-]', ''))) AS ?step2276) . BIND(((?step2276 + ?targetMotifMatchRegionMatchBeginPositionMF_04166266) - 1) AS ?thisPositionOn61) . BIND(?thisPositionOn61 AS ?thisPositionOn62) . BIND(?this AS ?pfs2t277) . BIND(URI(CONCAT(STR(?thisSequence), '#position', STR(?thisPositionOn61))) AS ?pfsb58) . BIND(URI(CONCAT(STR(?thisSequence), '#position', STR(?thisPositionOn62))) AS ?pfse59) . FILTER ((SUBSTR(?thisSequenceValue, ?thisPositionOn61, 1) = 'G')) . BIND(URI(CONCAT(STR(?this), '#MF_04166a57')) AS ?annotation57) . BIND(?this AS ?pfs56) . } OPTIONAL { ?this up:sequence ?thisSequence . ?thisSequence rdf:value ?thisSequenceValue . ?templateMotifMatch282 faldo:location ?templateMotifSequenceMatchRegionG3FFN6283 ; edam:is_output_of ?templateMotifSequenceProfileAlignmentOperationG3FFN6285 ; rdf:type edam:data_0869 ; rdf:value ?templateMotifCigarG3FFN6MF_04166278 . ?templateMotifSequenceMatchRegionG3FFN6283 faldo:begin ?templateMotifSequenceMatchBeginG3FFN6284 . ?templateMotifSequenceMatchBeginG3FFN6284 faldo:position ?templateMotifSequenceMatchBeginPositionG3FFN6279 ; faldo:reference isoform:G3FFN6-1 . ?templateMotifSequenceProfileAlignmentOperationG3FFN6285 edam:has_input signature:MF_04166 ; rdf:type edam:operation_0300 . ?targetMotifMatch286 faldo:location ?targetMotifMatchRegionMatch287 ; edam:is_output_of ?targetMotifSequenceAlignmentOperationMF_04166289 ; rdf:type edam:data_0869 ; rdf:value ?targetMotifMatchCigarG3FFN6MF_04166280 . ?targetMotifMatchRegionMatch287 faldo:begin ?targetMotifMatchRegionMatchBeginMF_04166288 . ?targetMotifMatchRegionMatchBeginMF_04166288 faldo:position ?targetMotifMatchRegionMatchBeginPositionMF_04166281 ; faldo:reference ?thisSequence . ?targetMotifSequenceAlignmentOperationMF_04166289 edam:has_input signature:MF_04166 ; rdf:type edam:operation_0300 . BIND(STRLEN(REPLACE(SUBSTR(?templateMotifCigarG3FFN6MF_04166278, 1, (STRLEN(?templateMotifCigarG3FFN6MF_04166278) - STRLEN(REPLACE(?templateMotifCigarG3FFN6MF_04166278, CONCAT('^(?:-*[^-]){', STR(((17 - ?templateMotifSequenceMatchBeginPositionG3FFN6279) + 1)), '}'), '')))), '[a-z]', '')) AS ?step1290) . BIND((STRLEN(SUBSTR(?targetMotifMatchCigarG3FFN6MF_04166280, 1, (STRLEN(?targetMotifMatchCigarG3FFN6MF_04166280) - STRLEN(REPLACE(?targetMotifMatchCigarG3FFN6MF_04166280, CONCAT('^(?:[a-z]*(?:[A-Z]|-)){', STR(?step1290), '}'), ''))))) - STRLEN(REPLACE(SUBSTR(?targetMotifMatchCigarG3FFN6MF_04166280, 1, (STRLEN(?targetMotifMatchCigarG3FFN6MF_04166280) - STRLEN(REPLACE(?targetMotifMatchCigarG3FFN6MF_04166280, CONCAT('^(?:[a-z]*(?:[A-Z]|-)){', STR(?step1290), '}'), '')))), '[^-]', ''))) AS ?step2291) . BIND(((?step2291 + ?targetMotifMatchRegionMatchBeginPositionMF_04166281) - 1) AS ?thisPositionOn68) . BIND(?thisPositionOn68 AS ?thisPositionOn69) . BIND(?this AS ?pfs2t292) . BIND(URI(CONCAT(STR(?thisSequence), '#position', STR(?thisPositionOn68))) AS ?pfsb65) . BIND(URI(CONCAT(STR(?thisSequence), '#position', STR(?thisPositionOn69))) AS ?pfse66) . FILTER ((SUBSTR(?thisSequenceValue, ?thisPositionOn68, 1) = 'K')) . BIND(URI(CONCAT(STR(?this), '#MF_04166a64')) AS ?annotation64) . BIND(?this AS ?pfs63) . } OPTIONAL { ?this up:sequence ?thisSequence . ?thisSequence rdf:value ?thisSequenceValue . ?templateMotifMatch297 faldo:location ?templateMotifSequenceMatchRegionG3FFN6298 ; edam:is_output_of ?templateMotifSequenceProfileAlignmentOperationG3FFN6300 ; rdf:type edam:data_0869 ; rdf:value ?templateMotifCigarG3FFN6MF_04166293 . ?templateMotifSequenceMatchRegionG3FFN6298 faldo:begin ?templateMotifSequenceMatchBeginG3FFN6299 . ?templateMotifSequenceMatchBeginG3FFN6299 faldo:position ?templateMotifSequenceMatchBeginPositionG3FFN6294 ; faldo:reference isoform:G3FFN6-1 . ?templateMotifSequenceProfileAlignmentOperationG3FFN6300 edam:has_input signature:MF_04166 ; rdf:type edam:operation_0300 . ?targetMotifMatch301 faldo:location ?targetMotifMatchRegionMatch302 ; edam:is_output_of ?targetMotifSequenceAlignmentOperationMF_04166304 ; rdf:type edam:data_0869 ; rdf:value ?targetMotifMatchCigarG3FFN6MF_04166295 . ?targetMotifMatchRegionMatch302 faldo:begin ?targetMotifMatchRegionMatchBeginMF_04166303 . ?targetMotifMatchRegionMatchBeginMF_04166303 faldo:position ?targetMotifMatchRegionMatchBeginPositionMF_04166296 ; faldo:reference ?thisSequence . ?targetMotifSequenceAlignmentOperationMF_04166304 edam:has_input signature:MF_04166 ; rdf:type edam:operation_0300 . BIND(STRLEN(REPLACE(SUBSTR(?templateMotifCigarG3FFN6MF_04166293, 1, (STRLEN(?templateMotifCigarG3FFN6MF_04166293) - STRLEN(REPLACE(?templateMotifCigarG3FFN6MF_04166293, CONCAT('^(?:-*[^-]){', STR(((18 - ?templateMotifSequenceMatchBeginPositionG3FFN6294) + 1)), '}'), '')))), '[a-z]', '')) AS ?step1305) . BIND((STRLEN(SUBSTR(?targetMotifMatchCigarG3FFN6MF_04166295, 1, (STRLEN(?targetMotifMatchCigarG3FFN6MF_04166295) - STRLEN(REPLACE(?targetMotifMatchCigarG3FFN6MF_04166295, CONCAT('^(?:[a-z]*(?:[A-Z]|-)){', STR(?step1305), '}'), ''))))) - STRLEN(REPLACE(SUBSTR(?targetMotifMatchCigarG3FFN6MF_04166295, 1, (STRLEN(?targetMotifMatchCigarG3FFN6MF_04166295) - STRLEN(REPLACE(?targetMotifMatchCigarG3FFN6MF_04166295, CONCAT('^(?:[a-z]*(?:[A-Z]|-)){', STR(?step1305), '}'), '')))), '[^-]', ''))) AS ?step2306) . BIND(((?step2306 + ?targetMotifMatchRegionMatchBeginPositionMF_04166296) - 1) AS ?thisPositionOn75) . BIND(?thisPositionOn75 AS ?thisPositionOn76) . BIND(?this AS ?pfs2t307) . BIND(URI(CONCAT(STR(?thisSequence), '#position', STR(?thisPositionOn75))) AS ?pfsb72) . BIND(URI(CONCAT(STR(?thisSequence), '#position', STR(?thisPositionOn76))) AS ?pfse73) . FILTER ((SUBSTR(?thisSequenceValue, ?thisPositionOn75, 1) = 'G')) . BIND(URI(CONCAT(STR(?this), '#MF_04166a71')) AS ?annotation71) . BIND(?this AS ?pfs70) . } OPTIONAL { ?this up:sequence ?thisSequence . ?thisSequence rdf:value ?thisSequenceValue . ?templateMotifMatch312 faldo:location ?templateMotifSequenceMatchRegionG3FFN6313 ; edam:is_output_of ?templateMotifSequenceProfileAlignmentOperationG3FFN6315 ; rdf:type edam:data_0869 ; rdf:value ?templateMotifCigarG3FFN6MF_04166308 . ?templateMotifSequenceMatchRegionG3FFN6313 faldo:begin ?templateMotifSequenceMatchBeginG3FFN6314 . ?templateMotifSequenceMatchBeginG3FFN6314 faldo:position ?templateMotifSequenceMatchBeginPositionG3FFN6309 ; faldo:reference isoform:G3FFN6-1 . ?templateMotifSequenceProfileAlignmentOperationG3FFN6315 edam:has_input signature:MF_04166 ; rdf:type edam:operation_0300 . ?targetMotifMatch316 faldo:location ?targetMotifMatchRegionMatch317 ; edam:is_output_of ?targetMotifSequenceAlignmentOperationMF_04166319 ; rdf:type edam:data_0869 ; rdf:value ?targetMotifMatchCigarG3FFN6MF_04166310 . ?targetMotifMatchRegionMatch317 faldo:begin ?targetMotifMatchRegionMatchBeginMF_04166318 . ?targetMotifMatchRegionMatchBeginMF_04166318 faldo:position ?targetMotifMatchRegionMatchBeginPositionMF_04166311 ; faldo:reference ?thisSequence . ?targetMotifSequenceAlignmentOperationMF_04166319 edam:has_input signature:MF_04166 ; rdf:type edam:operation_0300 . BIND(STRLEN(REPLACE(SUBSTR(?templateMotifCigarG3FFN6MF_04166308, 1, (STRLEN(?templateMotifCigarG3FFN6MF_04166308) - STRLEN(REPLACE(?templateMotifCigarG3FFN6MF_04166308, CONCAT('^(?:-*[^-]){', STR(((40 - ?templateMotifSequenceMatchBeginPositionG3FFN6309) + 1)), '}'), '')))), '[a-z]', '')) AS ?step1320) . BIND((STRLEN(SUBSTR(?targetMotifMatchCigarG3FFN6MF_04166310, 1, (STRLEN(?targetMotifMatchCigarG3FFN6MF_04166310) - STRLEN(REPLACE(?targetMotifMatchCigarG3FFN6MF_04166310, CONCAT('^(?:[a-z]*(?:[A-Z]|-)){', STR(?step1320), '}'), ''))))) - STRLEN(REPLACE(SUBSTR(?targetMotifMatchCigarG3FFN6MF_04166310, 1, (STRLEN(?targetMotifMatchCigarG3FFN6MF_04166310) - STRLEN(REPLACE(?targetMotifMatchCigarG3FFN6MF_04166310, CONCAT('^(?:[a-z]*(?:[A-Z]|-)){', STR(?step1320), '}'), '')))), '[^-]', ''))) AS ?step2321) . BIND(((?step2321 + ?targetMotifMatchRegionMatchBeginPositionMF_04166311) - 1) AS ?thisPositionOn82) . BIND(?thisPositionOn82 AS ?thisPositionOn83) . BIND(?this AS ?pfs2t322) . BIND(URI(CONCAT(STR(?thisSequence), '#position', STR(?thisPositionOn82))) AS ?pfsb79) . BIND(URI(CONCAT(STR(?thisSequence), '#position', STR(?thisPositionOn83))) AS ?pfse80) . FILTER ((SUBSTR(?thisSequenceValue, ?thisPositionOn82, 1) = 'N')) . BIND(URI(CONCAT(STR(?this), '#MF_04166a78')) AS ?annotation78) . BIND(?this AS ?pfs77) . } OPTIONAL { ?this up:sequence ?thisSequence . ?thisSequence rdf:value ?thisSequenceValue . ?templateMotifMatch327 faldo:location ?templateMotifSequenceMatchRegionG3FFN6328 ; edam:is_output_of ?templateMotifSequenceProfileAlignmentOperationG3FFN6330 ; rdf:type edam:data_0869 ; rdf:value ?templateMotifCigarG3FFN6MF_04166323 . ?templateMotifSequenceMatchRegionG3FFN6328 faldo:begin ?templateMotifSequenceMatchBeginG3FFN6329 . ?templateMotifSequenceMatchBeginG3FFN6329 faldo:position ?templateMotifSequenceMatchBeginPositionG3FFN6324 ; faldo:reference isoform:G3FFN6-1 . ?templateMotifSequenceProfileAlignmentOperationG3FFN6330 edam:has_input signature:MF_04166 ; rdf:type edam:operation_0300 . ?targetMotifMatch331 faldo:location ?targetMotifMatchRegionMatch332 ; edam:is_output_of ?targetMotifSequenceAlignmentOperationMF_04166334 ; rdf:type edam:data_0869 ; rdf:value ?targetMotifMatchCigarG3FFN6MF_04166325 . ?targetMotifMatchRegionMatch332 faldo:begin ?targetMotifMatchRegionMatchBeginMF_04166333 . ?targetMotifMatchRegionMatchBeginMF_04166333 faldo:position ?targetMotifMatchRegionMatchBeginPositionMF_04166326 ; faldo:reference ?thisSequence . ?targetMotifSequenceAlignmentOperationMF_04166334 edam:has_input signature:MF_04166 ; rdf:type edam:operation_0300 . BIND(STRLEN(REPLACE(SUBSTR(?templateMotifCigarG3FFN6MF_04166323, 1, (STRLEN(?templateMotifCigarG3FFN6MF_04166323) - STRLEN(REPLACE(?templateMotifCigarG3FFN6MF_04166323, CONCAT('^(?:-*[^-]){', STR(((42 - ?templateMotifSequenceMatchBeginPositionG3FFN6324) + 1)), '}'), '')))), '[a-z]', '')) AS ?step1335) . BIND((STRLEN(SUBSTR(?targetMotifMatchCigarG3FFN6MF_04166325, 1, (STRLEN(?targetMotifMatchCigarG3FFN6MF_04166325) - STRLEN(REPLACE(?targetMotifMatchCigarG3FFN6MF_04166325, CONCAT('^(?:[a-z]*(?:[A-Z]|-)){', STR(?step1335), '}'), ''))))) - STRLEN(REPLACE(SUBSTR(?targetMotifMatchCigarG3FFN6MF_04166325, 1, (STRLEN(?targetMotifMatchCigarG3FFN6MF_04166325) - STRLEN(REPLACE(?targetMotifMatchCigarG3FFN6MF_04166325, CONCAT('^(?:[a-z]*(?:[A-Z]|-)){', STR(?step1335), '}'), '')))), '[^-]', ''))) AS ?step2336) . BIND(((?step2336 + ?targetMotifMatchRegionMatchBeginPositionMF_04166326) - 1) AS ?thisPositionOn89) . BIND(?thisPositionOn89 AS ?thisPositionOn90) . BIND(?this AS ?pfs2t337) . BIND(URI(CONCAT(STR(?thisSequence), '#position', STR(?thisPositionOn89))) AS ?pfsb86) . BIND(URI(CONCAT(STR(?thisSequence), '#position', STR(?thisPositionOn90))) AS ?pfse87) . FILTER ((SUBSTR(?thisSequenceValue, ?thisPositionOn89, 1) = 'G')) . BIND(URI(CONCAT(STR(?this), '#MF_04166a85')) AS ?annotation85) . BIND(?this AS ?pfs84) . } OPTIONAL { ?this up:sequence ?thisSequence . ?thisSequence rdf:value ?thisSequenceValue . ?templateMotifMatch342 faldo:location ?templateMotifSequenceMatchRegionG3FFN6343 ; edam:is_output_of ?templateMotifSequenceProfileAlignmentOperationG3FFN6345 ; rdf:type edam:data_0869 ; rdf:value ?templateMotifCigarG3FFN6MF_04166338 . ?templateMotifSequenceMatchRegionG3FFN6343 faldo:begin ?templateMotifSequenceMatchBeginG3FFN6344 . ?templateMotifSequenceMatchBeginG3FFN6344 faldo:position ?templateMotifSequenceMatchBeginPositionG3FFN6339 ; faldo:reference isoform:G3FFN6-1 . ?templateMotifSequenceProfileAlignmentOperationG3FFN6345 edam:has_input signature:MF_04166 ; rdf:type edam:operation_0300 . ?targetMotifMatch346 faldo:location ?targetMotifMatchRegionMatch347 ; edam:is_output_of ?targetMotifSequenceAlignmentOperationMF_04166349 ; rdf:type edam:data_0869 ; rdf:value ?targetMotifMatchCigarG3FFN6MF_04166340 . ?targetMotifMatchRegionMatch347 faldo:begin ?targetMotifMatchRegionMatchBeginMF_04166348 . ?targetMotifMatchRegionMatchBeginMF_04166348 faldo:position ?targetMotifMatchRegionMatchBeginPositionMF_04166341 ; faldo:reference ?thisSequence . ?targetMotifSequenceAlignmentOperationMF_04166349 edam:has_input signature:MF_04166 ; rdf:type edam:operation_0300 . BIND(STRLEN(REPLACE(SUBSTR(?templateMotifCigarG3FFN6MF_04166338, 1, (STRLEN(?templateMotifCigarG3FFN6MF_04166338) - STRLEN(REPLACE(?templateMotifCigarG3FFN6MF_04166338, CONCAT('^(?:-*[^-]){', STR(((43 - ?templateMotifSequenceMatchBeginPositionG3FFN6339) + 1)), '}'), '')))), '[a-z]', '')) AS ?step1350) . BIND((STRLEN(SUBSTR(?targetMotifMatchCigarG3FFN6MF_04166340, 1, (STRLEN(?targetMotifMatchCigarG3FFN6MF_04166340) - STRLEN(REPLACE(?targetMotifMatchCigarG3FFN6MF_04166340, CONCAT('^(?:[a-z]*(?:[A-Z]|-)){', STR(?step1350), '}'), ''))))) - STRLEN(REPLACE(SUBSTR(?targetMotifMatchCigarG3FFN6MF_04166340, 1, (STRLEN(?targetMotifMatchCigarG3FFN6MF_04166340) - STRLEN(REPLACE(?targetMotifMatchCigarG3FFN6MF_04166340, CONCAT('^(?:[a-z]*(?:[A-Z]|-)){', STR(?step1350), '}'), '')))), '[^-]', ''))) AS ?step2351) . BIND(((?step2351 + ?targetMotifMatchRegionMatchBeginPositionMF_04166341) - 1) AS ?thisPositionOn96) . BIND(?thisPositionOn96 AS ?thisPositionOn97) . BIND(?this AS ?pfs2t352) . BIND(URI(CONCAT(STR(?thisSequence), '#position', STR(?thisPositionOn96))) AS ?pfsb93) . BIND(URI(CONCAT(STR(?thisSequence), '#position', STR(?thisPositionOn97))) AS ?pfse94) . FILTER ((SUBSTR(?thisSequenceValue, ?thisPositionOn96, 1) = 'H')) . BIND(URI(CONCAT(STR(?this), '#MF_04166a92')) AS ?annotation92) . BIND(?this AS ?pfs91) . } OPTIONAL { ?this up:sequence ?thisSequence . ?thisSequence rdf:value ?thisSequenceValue . ?templateMotifMatch357 faldo:location ?templateMotifSequenceMatchRegionG3FFN6358 ; edam:is_output_of ?templateMotifSequenceProfileAlignmentOperationG3FFN6360 ; rdf:type edam:data_0869 ; rdf:value ?templateMotifCigarG3FFN6MF_04166353 . ?templateMotifSequenceMatchRegionG3FFN6358 faldo:begin ?templateMotifSequenceMatchBeginG3FFN6359 . ?templateMotifSequenceMatchBeginG3FFN6359 faldo:position ?templateMotifSequenceMatchBeginPositionG3FFN6354 ; faldo:reference isoform:G3FFN6-1 . ?templateMotifSequenceProfileAlignmentOperationG3FFN6360 edam:has_input signature:MF_04166 ; rdf:type edam:operation_0300 . ?targetMotifMatch361 faldo:location ?targetMotifMatchRegionMatch362 ; edam:is_output_of ?targetMotifSequenceAlignmentOperationMF_04166364 ; rdf:type edam:data_0869 ; rdf:value ?targetMotifMatchCigarG3FFN6MF_04166355 . ?targetMotifMatchRegionMatch362 faldo:begin ?targetMotifMatchRegionMatchBeginMF_04166363 . ?targetMotifMatchRegionMatchBeginMF_04166363 faldo:position ?targetMotifMatchRegionMatchBeginPositionMF_04166356 ; faldo:reference ?thisSequence . ?targetMotifSequenceAlignmentOperationMF_04166364 edam:has_input signature:MF_04166 ; rdf:type edam:operation_0300 . BIND(STRLEN(REPLACE(SUBSTR(?templateMotifCigarG3FFN6MF_04166353, 1, (STRLEN(?templateMotifCigarG3FFN6MF_04166353) - STRLEN(REPLACE(?templateMotifCigarG3FFN6MF_04166353, CONCAT('^(?:-*[^-]){', STR(((44 - ?templateMotifSequenceMatchBeginPositionG3FFN6354) + 1)), '}'), '')))), '[a-z]', '')) AS ?step1365) . BIND((STRLEN(SUBSTR(?targetMotifMatchCigarG3FFN6MF_04166355, 1, (STRLEN(?targetMotifMatchCigarG3FFN6MF_04166355) - STRLEN(REPLACE(?targetMotifMatchCigarG3FFN6MF_04166355, CONCAT('^(?:[a-z]*(?:[A-Z]|-)){', STR(?step1365), '}'), ''))))) - STRLEN(REPLACE(SUBSTR(?targetMotifMatchCigarG3FFN6MF_04166355, 1, (STRLEN(?targetMotifMatchCigarG3FFN6MF_04166355) - STRLEN(REPLACE(?targetMotifMatchCigarG3FFN6MF_04166355, CONCAT('^(?:[a-z]*(?:[A-Z]|-)){', STR(?step1365), '}'), '')))), '[^-]', ''))) AS ?step2366) . BIND(((?step2366 + ?targetMotifMatchRegionMatchBeginPositionMF_04166356) - 1) AS ?thisPositionOn103) . BIND(?thisPositionOn103 AS ?thisPositionOn104) . BIND(?this AS ?pfs2t367) . BIND(URI(CONCAT(STR(?thisSequence), '#position', STR(?thisPositionOn103))) AS ?pfsb100) . BIND(URI(CONCAT(STR(?thisSequence), '#position', STR(?thisPositionOn104))) AS ?pfse101) . FILTER ((SUBSTR(?thisSequenceValue, ?thisPositionOn103, 1) = 'T')) . BIND(URI(CONCAT(STR(?this), '#MF_04166a99')) AS ?annotation99) . BIND(?this AS ?pfs98) . } OPTIONAL { ?this up:sequence ?thisSequence . ?thisSequence rdf:value ?thisSequenceValue . ?templateMotifMatch372 faldo:location ?templateMotifSequenceMatchRegionG3FFN6373 ; edam:is_output_of ?templateMotifSequenceProfileAlignmentOperationG3FFN6375 ; rdf:type edam:data_0869 ; rdf:value ?templateMotifCigarG3FFN6MF_04166368 . ?templateMotifSequenceMatchRegionG3FFN6373 faldo:begin ?templateMotifSequenceMatchBeginG3FFN6374 . ?templateMotifSequenceMatchBeginG3FFN6374 faldo:position ?templateMotifSequenceMatchBeginPositionG3FFN6369 ; faldo:reference isoform:G3FFN6-1 . ?templateMotifSequenceProfileAlignmentOperationG3FFN6375 edam:has_input signature:MF_04166 ; rdf:type edam:operation_0300 . ?targetMotifMatch376 faldo:location ?targetMotifMatchRegionMatch377 ; edam:is_output_of ?targetMotifSequenceAlignmentOperationMF_04166379 ; rdf:type edam:data_0869 ; rdf:value ?targetMotifMatchCigarG3FFN6MF_04166370 . ?targetMotifMatchRegionMatch377 faldo:begin ?targetMotifMatchRegionMatchBeginMF_04166378 . ?targetMotifMatchRegionMatchBeginMF_04166378 faldo:position ?targetMotifMatchRegionMatchBeginPositionMF_04166371 ; faldo:reference ?thisSequence . ?targetMotifSequenceAlignmentOperationMF_04166379 edam:has_input signature:MF_04166 ; rdf:type edam:operation_0300 . BIND(STRLEN(REPLACE(SUBSTR(?templateMotifCigarG3FFN6MF_04166368, 1, (STRLEN(?templateMotifCigarG3FFN6MF_04166368) - STRLEN(REPLACE(?templateMotifCigarG3FFN6MF_04166368, CONCAT('^(?:-*[^-]){', STR(((127 - ?templateMotifSequenceMatchBeginPositionG3FFN6369) + 1)), '}'), '')))), '[a-z]', '')) AS ?step1380) . BIND((STRLEN(SUBSTR(?targetMotifMatchCigarG3FFN6MF_04166370, 1, (STRLEN(?targetMotifMatchCigarG3FFN6MF_04166370) - STRLEN(REPLACE(?targetMotifMatchCigarG3FFN6MF_04166370, CONCAT('^(?:[a-z]*(?:[A-Z]|-)){', STR(?step1380), '}'), ''))))) - STRLEN(REPLACE(SUBSTR(?targetMotifMatchCigarG3FFN6MF_04166370, 1, (STRLEN(?targetMotifMatchCigarG3FFN6MF_04166370) - STRLEN(REPLACE(?targetMotifMatchCigarG3FFN6MF_04166370, CONCAT('^(?:[a-z]*(?:[A-Z]|-)){', STR(?step1380), '}'), '')))), '[^-]', ''))) AS ?step2381) . BIND(((?step2381 + ?targetMotifMatchRegionMatchBeginPositionMF_04166371) - 1) AS ?thisPositionOn110) . BIND(?thisPositionOn110 AS ?thisPositionOn111) . BIND(?this AS ?pfs2t382) . BIND(URI(CONCAT(STR(?thisSequence), '#position', STR(?thisPositionOn110))) AS ?pfsb107) . BIND(URI(CONCAT(STR(?thisSequence), '#position', STR(?thisPositionOn111))) AS ?pfse108) . FILTER ((SUBSTR(?thisSequenceValue, ?thisPositionOn110, 1) = 'S')) . BIND(URI(CONCAT(STR(?this), '#MF_04166a106')) AS ?annotation106) . BIND(?this AS ?pfs105) . } OPTIONAL { ?this up:sequence ?thisSequence . ?thisSequence rdf:value ?thisSequenceValue . ?templateMotifMatch387 faldo:location ?templateMotifSequenceMatchRegionG3FFN6388 ; edam:is_output_of ?templateMotifSequenceProfileAlignmentOperationG3FFN6390 ; rdf:type edam:data_0869 ; rdf:value ?templateMotifCigarG3FFN6MF_04166383 . ?templateMotifSequenceMatchRegionG3FFN6388 faldo:begin ?templateMotifSequenceMatchBeginG3FFN6389 . ?templateMotifSequenceMatchBeginG3FFN6389 faldo:position ?templateMotifSequenceMatchBeginPositionG3FFN6384 ; faldo:reference isoform:G3FFN6-1 . ?templateMotifSequenceProfileAlignmentOperationG3FFN6390 edam:has_input signature:MF_04166 ; rdf:type edam:operation_0300 . ?targetMotifMatch391 faldo:location ?targetMotifMatchRegionMatch392 ; edam:is_output_of ?targetMotifSequenceAlignmentOperationMF_04166394 ; rdf:type edam:data_0869 ; rdf:value ?targetMotifMatchCigarG3FFN6MF_04166385 . ?targetMotifMatchRegionMatch392 faldo:begin ?targetMotifMatchRegionMatchBeginMF_04166393 . ?targetMotifMatchRegionMatchBeginMF_04166393 faldo:position ?targetMotifMatchRegionMatchBeginPositionMF_04166386 ; faldo:reference ?thisSequence . ?targetMotifSequenceAlignmentOperationMF_04166394 edam:has_input signature:MF_04166 ; rdf:type edam:operation_0300 . BIND(STRLEN(REPLACE(SUBSTR(?templateMotifCigarG3FFN6MF_04166383, 1, (STRLEN(?templateMotifCigarG3FFN6MF_04166383) - STRLEN(REPLACE(?templateMotifCigarG3FFN6MF_04166383, CONCAT('^(?:-*[^-]){', STR(((128 - ?templateMotifSequenceMatchBeginPositionG3FFN6384) + 1)), '}'), '')))), '[a-z]', '')) AS ?step1395) . BIND((STRLEN(SUBSTR(?targetMotifMatchCigarG3FFN6MF_04166385, 1, (STRLEN(?targetMotifMatchCigarG3FFN6MF_04166385) - STRLEN(REPLACE(?targetMotifMatchCigarG3FFN6MF_04166385, CONCAT('^(?:[a-z]*(?:[A-Z]|-)){', STR(?step1395), '}'), ''))))) - STRLEN(REPLACE(SUBSTR(?targetMotifMatchCigarG3FFN6MF_04166385, 1, (STRLEN(?targetMotifMatchCigarG3FFN6MF_04166385) - STRLEN(REPLACE(?targetMotifMatchCigarG3FFN6MF_04166385, CONCAT('^(?:[a-z]*(?:[A-Z]|-)){', STR(?step1395), '}'), '')))), '[^-]', ''))) AS ?step2396) . BIND(((?step2396 + ?targetMotifMatchRegionMatchBeginPositionMF_04166386) - 1) AS ?thisPositionOn117) . BIND(?thisPositionOn117 AS ?thisPositionOn118) . BIND(?this AS ?pfs2t397) . BIND(URI(CONCAT(STR(?thisSequence), '#position', STR(?thisPositionOn117))) AS ?pfsb114) . BIND(URI(CONCAT(STR(?thisSequence), '#position', STR(?thisPositionOn118))) AS ?pfse115) . FILTER ((SUBSTR(?thisSequenceValue, ?thisPositionOn117, 1) = 'T')) . BIND(URI(CONCAT(STR(?this), '#MF_04166a113')) AS ?annotation113) . BIND(?this AS ?pfs112) . } OPTIONAL { ?this up:sequence ?thisSequence . ?thisSequence rdf:value ?thisSequenceValue . ?templateMotifMatch402 faldo:location ?templateMotifSequenceMatchRegionG3FFN6403 ; edam:is_output_of ?templateMotifSequenceProfileAlignmentOperationG3FFN6405 ; rdf:type edam:data_0869 ; rdf:value ?templateMotifCigarG3FFN6MF_04166398 . ?templateMotifSequenceMatchRegionG3FFN6403 faldo:begin ?templateMotifSequenceMatchBeginG3FFN6404 . ?templateMotifSequenceMatchBeginG3FFN6404 faldo:position ?templateMotifSequenceMatchBeginPositionG3FFN6399 ; faldo:reference isoform:G3FFN6-1 . ?templateMotifSequenceProfileAlignmentOperationG3FFN6405 edam:has_input signature:MF_04166 ; rdf:type edam:operation_0300 . ?targetMotifMatch406 faldo:location ?targetMotifMatchRegionMatch407 ; edam:is_output_of ?targetMotifSequenceAlignmentOperationMF_04166409 ; rdf:type edam:data_0869 ; rdf:value ?targetMotifMatchCigarG3FFN6MF_04166400 . ?targetMotifMatchRegionMatch407 faldo:begin ?targetMotifMatchRegionMatchBeginMF_04166408 . ?targetMotifMatchRegionMatchBeginMF_04166408 faldo:position ?targetMotifMatchRegionMatchBeginPositionMF_04166401 ; faldo:reference ?thisSequence . ?targetMotifSequenceAlignmentOperationMF_04166409 edam:has_input signature:MF_04166 ; rdf:type edam:operation_0300 . BIND(STRLEN(REPLACE(SUBSTR(?templateMotifCigarG3FFN6MF_04166398, 1, (STRLEN(?templateMotifCigarG3FFN6MF_04166398) - STRLEN(REPLACE(?templateMotifCigarG3FFN6MF_04166398, CONCAT('^(?:-*[^-]){', STR(((142 - ?templateMotifSequenceMatchBeginPositionG3FFN6399) + 1)), '}'), '')))), '[a-z]', '')) AS ?step1410) . BIND((STRLEN(SUBSTR(?targetMotifMatchCigarG3FFN6MF_04166400, 1, (STRLEN(?targetMotifMatchCigarG3FFN6MF_04166400) - STRLEN(REPLACE(?targetMotifMatchCigarG3FFN6MF_04166400, CONCAT('^(?:[a-z]*(?:[A-Z]|-)){', STR(?step1410), '}'), ''))))) - STRLEN(REPLACE(SUBSTR(?targetMotifMatchCigarG3FFN6MF_04166400, 1, (STRLEN(?targetMotifMatchCigarG3FFN6MF_04166400) - STRLEN(REPLACE(?targetMotifMatchCigarG3FFN6MF_04166400, CONCAT('^(?:[a-z]*(?:[A-Z]|-)){', STR(?step1410), '}'), '')))), '[^-]', ''))) AS ?step2411) . BIND(((?step2411 + ?targetMotifMatchRegionMatchBeginPositionMF_04166401) - 1) AS ?thisPositionOn124) . BIND(?thisPositionOn124 AS ?thisPositionOn125) . BIND(?this AS ?pfs2t412) . BIND(URI(CONCAT(STR(?thisSequence), '#position', STR(?thisPositionOn124))) AS ?pfsb121) . BIND(URI(CONCAT(STR(?thisSequence), '#position', STR(?thisPositionOn125))) AS ?pfse122) . FILTER ((SUBSTR(?thisSequenceValue, ?thisPositionOn124, 1) = 'R')) . BIND(URI(CONCAT(STR(?this), '#MF_04166a120')) AS ?annotation120) . BIND(?this AS ?pfs119) . } OPTIONAL { ?this up:sequence ?thisSequence . ?thisSequence rdf:value ?thisSequenceValue . ?templateMotifMatch417 faldo:location ?templateMotifSequenceMatchRegionG3FFN6418 ; edam:is_output_of ?templateMotifSequenceProfileAlignmentOperationG3FFN6420 ; rdf:type edam:data_0869 ; rdf:value ?templateMotifCigarG3FFN6MF_04166413 . ?templateMotifSequenceMatchRegionG3FFN6418 faldo:begin ?templateMotifSequenceMatchBeginG3FFN6419 . ?templateMotifSequenceMatchBeginG3FFN6419 faldo:position ?templateMotifSequenceMatchBeginPositionG3FFN6414 ; faldo:reference isoform:G3FFN6-1 . ?templateMotifSequenceProfileAlignmentOperationG3FFN6420 edam:has_input signature:MF_04166 ; rdf:type edam:operation_0300 . ?targetMotifMatch421 faldo:location ?targetMotifMatchRegionMatch422 ; edam:is_output_of ?targetMotifSequenceAlignmentOperationMF_04166424 ; rdf:type edam:data_0869 ; rdf:value ?targetMotifMatchCigarG3FFN6MF_04166415 . ?targetMotifMatchRegionMatch422 faldo:begin ?targetMotifMatchRegionMatchBeginMF_04166423 . ?targetMotifMatchRegionMatchBeginMF_04166423 faldo:position ?targetMotifMatchRegionMatchBeginPositionMF_04166416 ; faldo:reference ?thisSequence . ?targetMotifSequenceAlignmentOperationMF_04166424 edam:has_input signature:MF_04166 ; rdf:type edam:operation_0300 . BIND(STRLEN(REPLACE(SUBSTR(?templateMotifCigarG3FFN6MF_04166413, 1, (STRLEN(?templateMotifCigarG3FFN6MF_04166413) - STRLEN(REPLACE(?templateMotifCigarG3FFN6MF_04166413, CONCAT('^(?:-*[^-]){', STR(((187 - ?templateMotifSequenceMatchBeginPositionG3FFN6414) + 1)), '}'), '')))), '[a-z]', '')) AS ?step1425) . BIND((STRLEN(SUBSTR(?targetMotifMatchCigarG3FFN6MF_04166415, 1, (STRLEN(?targetMotifMatchCigarG3FFN6MF_04166415) - STRLEN(REPLACE(?targetMotifMatchCigarG3FFN6MF_04166415, CONCAT('^(?:[a-z]*(?:[A-Z]|-)){', STR(?step1425), '}'), ''))))) - STRLEN(REPLACE(SUBSTR(?targetMotifMatchCigarG3FFN6MF_04166415, 1, (STRLEN(?targetMotifMatchCigarG3FFN6MF_04166415) - STRLEN(REPLACE(?targetMotifMatchCigarG3FFN6MF_04166415, CONCAT('^(?:[a-z]*(?:[A-Z]|-)){', STR(?step1425), '}'), '')))), '[^-]', ''))) AS ?step2426) . BIND(((?step2426 + ?targetMotifMatchRegionMatchBeginPositionMF_04166416) - 1) AS ?thisPositionOn131) . BIND(?thisPositionOn131 AS ?thisPositionOn132) . BIND(?this AS ?pfs2t427) . BIND(URI(CONCAT(STR(?thisSequence), '#position', STR(?thisPositionOn131))) AS ?pfsb128) . BIND(URI(CONCAT(STR(?thisSequence), '#position', STR(?thisPositionOn132))) AS ?pfse129) . FILTER ((SUBSTR(?thisSequenceValue, ?thisPositionOn131, 1) = 'Q')) . BIND(URI(CONCAT(STR(?this), '#MF_04166a127')) AS ?annotation127) . BIND(?this AS ?pfs126) . } OPTIONAL { ?this up:sequence ?thisSequence . ?thisSequence rdf:value ?thisSequenceValue . ?templateMotifMatch432 faldo:location ?templateMotifSequenceMatchRegionG3FFN6433 ; edam:is_output_of ?templateMotifSequenceProfileAlignmentOperationG3FFN6435 ; rdf:type edam:data_0869 ; rdf:value ?templateMotifCigarG3FFN6MF_04166428 . ?templateMotifSequenceMatchRegionG3FFN6433 faldo:begin ?templateMotifSequenceMatchBeginG3FFN6434 . ?templateMotifSequenceMatchBeginG3FFN6434 faldo:position ?templateMotifSequenceMatchBeginPositionG3FFN6429 ; faldo:reference isoform:G3FFN6-1 . ?templateMotifSequenceProfileAlignmentOperationG3FFN6435 edam:has_input signature:MF_04166 ; rdf:type edam:operation_0300 . ?targetMotifMatch436 faldo:location ?targetMotifMatchRegionMatch437 ; edam:is_output_of ?targetMotifSequenceAlignmentOperationMF_04166439 ; rdf:type edam:data_0869 ; rdf:value ?targetMotifMatchCigarG3FFN6MF_04166430 . ?targetMotifMatchRegionMatch437 faldo:begin ?targetMotifMatchRegionMatchBeginMF_04166438 . ?targetMotifMatchRegionMatchBeginMF_04166438 faldo:position ?targetMotifMatchRegionMatchBeginPositionMF_04166431 ; faldo:reference ?thisSequence . ?targetMotifSequenceAlignmentOperationMF_04166439 edam:has_input signature:MF_04166 ; rdf:type edam:operation_0300 . BIND(STRLEN(REPLACE(SUBSTR(?templateMotifCigarG3FFN6MF_04166428, 1, (STRLEN(?templateMotifCigarG3FFN6MF_04166428) - STRLEN(REPLACE(?templateMotifCigarG3FFN6MF_04166428, CONCAT('^(?:-*[^-]){', STR(((202 - ?templateMotifSequenceMatchBeginPositionG3FFN6429) + 1)), '}'), '')))), '[a-z]', '')) AS ?step1440) . BIND((STRLEN(SUBSTR(?targetMotifMatchCigarG3FFN6MF_04166430, 1, (STRLEN(?targetMotifMatchCigarG3FFN6MF_04166430) - STRLEN(REPLACE(?targetMotifMatchCigarG3FFN6MF_04166430, CONCAT('^(?:[a-z]*(?:[A-Z]|-)){', STR(?step1440), '}'), ''))))) - STRLEN(REPLACE(SUBSTR(?targetMotifMatchCigarG3FFN6MF_04166430, 1, (STRLEN(?targetMotifMatchCigarG3FFN6MF_04166430) - STRLEN(REPLACE(?targetMotifMatchCigarG3FFN6MF_04166430, CONCAT('^(?:[a-z]*(?:[A-Z]|-)){', STR(?step1440), '}'), '')))), '[^-]', ''))) AS ?step2441) . BIND(((?step2441 + ?targetMotifMatchRegionMatchBeginPositionMF_04166431) - 1) AS ?thisPositionOn138) . BIND(?thisPositionOn138 AS ?thisPositionOn139) . BIND(?this AS ?pfs2t442) . BIND(URI(CONCAT(STR(?thisSequence), '#position', STR(?thisPositionOn138))) AS ?pfsb135) . BIND(URI(CONCAT(STR(?thisSequence), '#position', STR(?thisPositionOn139))) AS ?pfse136) . FILTER ((SUBSTR(?thisSequenceValue, ?thisPositionOn138, 1) = 'T')) . BIND(URI(CONCAT(STR(?this), '#MF_04166a134')) AS ?annotation134) . BIND(?this AS ?pfs133) . } OPTIONAL { ?this up:sequence ?thisSequence . ?thisSequence rdf:value ?thisSequenceValue . ?templateMotifMatch447 faldo:location ?templateMotifSequenceMatchRegionG3FFN6448 ; edam:is_output_of ?templateMotifSequenceProfileAlignmentOperationG3FFN6450 ; rdf:type edam:data_0869 ; rdf:value ?templateMotifCigarG3FFN6MF_04166443 . ?templateMotifSequenceMatchRegionG3FFN6448 faldo:begin ?templateMotifSequenceMatchBeginG3FFN6449 . ?templateMotifSequenceMatchBeginG3FFN6449 faldo:position ?templateMotifSequenceMatchBeginPositionG3FFN6444 ; faldo:reference isoform:G3FFN6-1 . ?templateMotifSequenceProfileAlignmentOperationG3FFN6450 edam:has_input signature:MF_04166 ; rdf:type edam:operation_0300 . ?targetMotifMatch451 faldo:location ?targetMotifMatchRegionMatch452 ; edam:is_output_of ?targetMotifSequenceAlignmentOperationMF_04166454 ; rdf:type edam:data_0869 ; rdf:value ?targetMotifMatchCigarG3FFN6MF_04166445 . ?targetMotifMatchRegionMatch452 faldo:begin ?targetMotifMatchRegionMatchBeginMF_04166453 . ?targetMotifMatchRegionMatchBeginMF_04166453 faldo:position ?targetMotifMatchRegionMatchBeginPositionMF_04166446 ; faldo:reference ?thisSequence . ?targetMotifSequenceAlignmentOperationMF_04166454 edam:has_input signature:MF_04166 ; rdf:type edam:operation_0300 . BIND(STRLEN(REPLACE(SUBSTR(?templateMotifCigarG3FFN6MF_04166443, 1, (STRLEN(?templateMotifCigarG3FFN6MF_04166443) - STRLEN(REPLACE(?templateMotifCigarG3FFN6MF_04166443, CONCAT('^(?:-*[^-]){', STR(((263 - ?templateMotifSequenceMatchBeginPositionG3FFN6444) + 1)), '}'), '')))), '[a-z]', '')) AS ?step1455) . BIND((STRLEN(SUBSTR(?targetMotifMatchCigarG3FFN6MF_04166445, 1, (STRLEN(?targetMotifMatchCigarG3FFN6MF_04166445) - STRLEN(REPLACE(?targetMotifMatchCigarG3FFN6MF_04166445, CONCAT('^(?:[a-z]*(?:[A-Z]|-)){', STR(?step1455), '}'), ''))))) - STRLEN(REPLACE(SUBSTR(?targetMotifMatchCigarG3FFN6MF_04166445, 1, (STRLEN(?targetMotifMatchCigarG3FFN6MF_04166445) - STRLEN(REPLACE(?targetMotifMatchCigarG3FFN6MF_04166445, CONCAT('^(?:[a-z]*(?:[A-Z]|-)){', STR(?step1455), '}'), '')))), '[^-]', ''))) AS ?step2456) . BIND(((?step2456 + ?targetMotifMatchRegionMatchBeginPositionMF_04166446) - 1) AS ?thisPositionOn145) . BIND(?thisPositionOn145 AS ?thisPositionOn146) . BIND(?this AS ?pfs2t457) . BIND(URI(CONCAT(STR(?thisSequence), '#position', STR(?thisPositionOn145))) AS ?pfsb142) . BIND(URI(CONCAT(STR(?thisSequence), '#position', STR(?thisPositionOn146))) AS ?pfse143) . FILTER ((SUBSTR(?thisSequenceValue, ?thisPositionOn145, 1) = 'T')) . BIND(URI(CONCAT(STR(?this), '#MF_04166a141')) AS ?annotation141) . BIND(?this AS ?pfs140) . } OPTIONAL { ?this up:sequence ?thisSequence . ?thisSequence rdf:value ?thisSequenceValue . ?templateMotifMatch462 faldo:location ?templateMotifSequenceMatchRegionG3FFN6463 ; edam:is_output_of ?templateMotifSequenceProfileAlignmentOperationG3FFN6465 ; rdf:type edam:data_0869 ; rdf:value ?templateMotifCigarG3FFN6MF_04166458 . ?templateMotifSequenceMatchRegionG3FFN6463 faldo:begin ?templateMotifSequenceMatchBeginG3FFN6464 . ?templateMotifSequenceMatchBeginG3FFN6464 faldo:position ?templateMotifSequenceMatchBeginPositionG3FFN6459 ; faldo:reference isoform:G3FFN6-1 . ?templateMotifSequenceProfileAlignmentOperationG3FFN6465 edam:has_input signature:MF_04166 ; rdf:type edam:operation_0300 . ?targetMotifMatch466 faldo:location ?targetMotifMatchRegionMatch467 ; edam:is_output_of ?targetMotifSequenceAlignmentOperationMF_04166469 ; rdf:type edam:data_0869 ; rdf:value ?targetMotifMatchCigarG3FFN6MF_04166460 . ?targetMotifMatchRegionMatch467 faldo:begin ?targetMotifMatchRegionMatchBeginMF_04166468 . ?targetMotifMatchRegionMatchBeginMF_04166468 faldo:position ?targetMotifMatchRegionMatchBeginPositionMF_04166461 ; faldo:reference ?thisSequence . ?targetMotifSequenceAlignmentOperationMF_04166469 edam:has_input signature:MF_04166 ; rdf:type edam:operation_0300 . BIND(STRLEN(REPLACE(SUBSTR(?templateMotifCigarG3FFN6MF_04166458, 1, (STRLEN(?templateMotifCigarG3FFN6MF_04166458) - STRLEN(REPLACE(?templateMotifCigarG3FFN6MF_04166458, CONCAT('^(?:-*[^-]){', STR(((264 - ?templateMotifSequenceMatchBeginPositionG3FFN6459) + 1)), '}'), '')))), '[a-z]', '')) AS ?step1470) . BIND((STRLEN(SUBSTR(?targetMotifMatchCigarG3FFN6MF_04166460, 1, (STRLEN(?targetMotifMatchCigarG3FFN6MF_04166460) - STRLEN(REPLACE(?targetMotifMatchCigarG3FFN6MF_04166460, CONCAT('^(?:[a-z]*(?:[A-Z]|-)){', STR(?step1470), '}'), ''))))) - STRLEN(REPLACE(SUBSTR(?targetMotifMatchCigarG3FFN6MF_04166460, 1, (STRLEN(?targetMotifMatchCigarG3FFN6MF_04166460) - STRLEN(REPLACE(?targetMotifMatchCigarG3FFN6MF_04166460, CONCAT('^(?:[a-z]*(?:[A-Z]|-)){', STR(?step1470), '}'), '')))), '[^-]', ''))) AS ?step2471) . BIND(((?step2471 + ?targetMotifMatchRegionMatchBeginPositionMF_04166461) - 1) AS ?thisPositionOn152) . BIND(?thisPositionOn152 AS ?thisPositionOn153) . BIND(?this AS ?pfs2t472) . BIND(URI(CONCAT(STR(?thisSequence), '#position', STR(?thisPositionOn152))) AS ?pfsb149) . BIND(URI(CONCAT(STR(?thisSequence), '#position', STR(?thisPositionOn153))) AS ?pfse150) . FILTER ((SUBSTR(?thisSequenceValue, ?thisPositionOn152, 1) = 'V')) . BIND(URI(CONCAT(STR(?this), '#MF_04166a148')) AS ?annotation148) . BIND(?this AS ?pfs147) . } OPTIONAL { ?this up:sequence ?thisSequence . ?thisSequence rdf:value ?thisSequenceValue . ?templateMotifMatch477 faldo:location ?templateMotifSequenceMatchRegionG3FFN6478 ; edam:is_output_of ?templateMotifSequenceProfileAlignmentOperationG3FFN6480 ; rdf:type edam:data_0869 ; rdf:value ?templateMotifCigarG3FFN6MF_04166473 . ?templateMotifSequenceMatchRegionG3FFN6478 faldo:begin ?templateMotifSequenceMatchBeginG3FFN6479 . ?templateMotifSequenceMatchBeginG3FFN6479 faldo:position ?templateMotifSequenceMatchBeginPositionG3FFN6474 ; faldo:reference isoform:G3FFN6-1 . ?templateMotifSequenceProfileAlignmentOperationG3FFN6480 edam:has_input signature:MF_04166 ; rdf:type edam:operation_0300 . ?targetMotifMatch481 faldo:location ?targetMotifMatchRegionMatch482 ; edam:is_output_of ?targetMotifSequenceAlignmentOperationMF_04166484 ; rdf:type edam:data_0869 ; rdf:value ?targetMotifMatchCigarG3FFN6MF_04166475 . ?targetMotifMatchRegionMatch482 faldo:begin ?targetMotifMatchRegionMatchBeginMF_04166483 . ?targetMotifMatchRegionMatchBeginMF_04166483 faldo:position ?targetMotifMatchRegionMatchBeginPositionMF_04166476 ; faldo:reference ?thisSequence . ?targetMotifSequenceAlignmentOperationMF_04166484 edam:has_input signature:MF_04166 ; rdf:type edam:operation_0300 . BIND(STRLEN(REPLACE(SUBSTR(?templateMotifCigarG3FFN6MF_04166473, 1, (STRLEN(?templateMotifCigarG3FFN6MF_04166473) - STRLEN(REPLACE(?templateMotifCigarG3FFN6MF_04166473, CONCAT('^(?:-*[^-]){', STR(((269 - ?templateMotifSequenceMatchBeginPositionG3FFN6474) + 1)), '}'), '')))), '[a-z]', '')) AS ?step1485) . BIND((STRLEN(SUBSTR(?targetMotifMatchCigarG3FFN6MF_04166475, 1, (STRLEN(?targetMotifMatchCigarG3FFN6MF_04166475) - STRLEN(REPLACE(?targetMotifMatchCigarG3FFN6MF_04166475, CONCAT('^(?:[a-z]*(?:[A-Z]|-)){', STR(?step1485), '}'), ''))))) - STRLEN(REPLACE(SUBSTR(?targetMotifMatchCigarG3FFN6MF_04166475, 1, (STRLEN(?targetMotifMatchCigarG3FFN6MF_04166475) - STRLEN(REPLACE(?targetMotifMatchCigarG3FFN6MF_04166475, CONCAT('^(?:[a-z]*(?:[A-Z]|-)){', STR(?step1485), '}'), '')))), '[^-]', ''))) AS ?step2486) . BIND(((?step2486 + ?targetMotifMatchRegionMatchBeginPositionMF_04166476) - 1) AS ?thisPositionOn159) . BIND(?thisPositionOn159 AS ?thisPositionOn160) . BIND(?this AS ?pfs2t487) . BIND(URI(CONCAT(STR(?thisSequence), '#position', STR(?thisPositionOn159))) AS ?pfsb156) . BIND(URI(CONCAT(STR(?thisSequence), '#position', STR(?thisPositionOn160))) AS ?pfse157) . FILTER ((SUBSTR(?thisSequenceValue, ?thisPositionOn159, 1) = 'R')) . BIND(URI(CONCAT(STR(?this), '#MF_04166a155')) AS ?annotation155) . BIND(?this AS ?pfs154) . } OPTIONAL { ?this up:sequence ?thisSequence . ?thisSequence rdf:value ?thisSequenceValue . ?templateMotifMatch492 faldo:location ?templateMotifSequenceMatchRegionG3FFN6493 ; edam:is_output_of ?templateMotifSequenceProfileAlignmentOperationG3FFN6495 ; rdf:type edam:data_0869 ; rdf:value ?templateMotifCigarG3FFN6MF_04166488 . ?templateMotifSequenceMatchRegionG3FFN6493 faldo:begin ?templateMotifSequenceMatchBeginG3FFN6494 . ?templateMotifSequenceMatchBeginG3FFN6494 faldo:position ?templateMotifSequenceMatchBeginPositionG3FFN6489 ; faldo:reference isoform:G3FFN6-1 . ?templateMotifSequenceProfileAlignmentOperationG3FFN6495 edam:has_input signature:MF_04166 ; rdf:type edam:operation_0300 . ?targetMotifMatch496 faldo:location ?targetMotifMatchRegionMatch497 ; edam:is_output_of ?targetMotifSequenceAlignmentOperationMF_04166499 ; rdf:type edam:data_0869 ; rdf:value ?targetMotifMatchCigarG3FFN6MF_04166490 . ?targetMotifMatchRegionMatch497 faldo:begin ?targetMotifMatchRegionMatchBeginMF_04166498 . ?targetMotifMatchRegionMatchBeginMF_04166498 faldo:position ?targetMotifMatchRegionMatchBeginPositionMF_04166491 ; faldo:reference ?thisSequence . ?targetMotifSequenceAlignmentOperationMF_04166499 edam:has_input signature:MF_04166 ; rdf:type edam:operation_0300 . BIND(STRLEN(REPLACE(SUBSTR(?templateMotifCigarG3FFN6MF_04166488, 1, (STRLEN(?templateMotifCigarG3FFN6MF_04166488) - STRLEN(REPLACE(?templateMotifCigarG3FFN6MF_04166488, CONCAT('^(?:-*[^-]){', STR(((294 - ?templateMotifSequenceMatchBeginPositionG3FFN6489) + 1)), '}'), '')))), '[a-z]', '')) AS ?step1500) . BIND((STRLEN(SUBSTR(?targetMotifMatchCigarG3FFN6MF_04166490, 1, (STRLEN(?targetMotifMatchCigarG3FFN6MF_04166490) - STRLEN(REPLACE(?targetMotifMatchCigarG3FFN6MF_04166490, CONCAT('^(?:[a-z]*(?:[A-Z]|-)){', STR(?step1500), '}'), ''))))) - STRLEN(REPLACE(SUBSTR(?targetMotifMatchCigarG3FFN6MF_04166490, 1, (STRLEN(?targetMotifMatchCigarG3FFN6MF_04166490) - STRLEN(REPLACE(?targetMotifMatchCigarG3FFN6MF_04166490, CONCAT('^(?:[a-z]*(?:[A-Z]|-)){', STR(?step1500), '}'), '')))), '[^-]', ''))) AS ?step2501) . BIND(((?step2501 + ?targetMotifMatchRegionMatchBeginPositionMF_04166491) - 1) AS ?thisPositionOn166) . BIND(?thisPositionOn166 AS ?thisPositionOn167) . BIND(?this AS ?pfs2t502) . BIND(URI(CONCAT(STR(?thisSequence), '#position', STR(?thisPositionOn166))) AS ?pfsb163) . BIND(URI(CONCAT(STR(?thisSequence), '#position', STR(?thisPositionOn167))) AS ?pfse164) . FILTER ((SUBSTR(?thisSequenceValue, ?thisPositionOn166, 1) = 'N')) . BIND(URI(CONCAT(STR(?this), '#MF_04166a162')) AS ?annotation162) . BIND(?this AS ?pfs161) . } OPTIONAL { ?this up:sequence ?thisSequence . ?thisSequence rdf:value ?thisSequenceValue . ?templateMotifMatch507 faldo:location ?templateMotifSequenceMatchRegionG3FFN6508 ; edam:is_output_of ?templateMotifSequenceProfileAlignmentOperationG3FFN6510 ; rdf:type edam:data_0869 ; rdf:value ?templateMotifCigarG3FFN6MF_04166503 . ?templateMotifSequenceMatchRegionG3FFN6508 faldo:begin ?templateMotifSequenceMatchBeginG3FFN6509 . ?templateMotifSequenceMatchBeginG3FFN6509 faldo:position ?templateMotifSequenceMatchBeginPositionG3FFN6504 ; faldo:reference isoform:G3FFN6-1 . ?templateMotifSequenceProfileAlignmentOperationG3FFN6510 edam:has_input signature:MF_04166 ; rdf:type edam:operation_0300 . ?targetMotifMatch511 faldo:location ?targetMotifMatchRegionMatch512 ; edam:is_output_of ?targetMotifSequenceAlignmentOperationMF_04166514 ; rdf:type edam:data_0869 ; rdf:value ?targetMotifMatchCigarG3FFN6MF_04166505 . ?targetMotifMatchRegionMatch512 faldo:begin ?targetMotifMatchRegionMatchBeginMF_04166513 . ?targetMotifMatchRegionMatchBeginMF_04166513 faldo:position ?targetMotifMatchRegionMatchBeginPositionMF_04166506 ; faldo:reference ?thisSequence . ?targetMotifSequenceAlignmentOperationMF_04166514 edam:has_input signature:MF_04166 ; rdf:type edam:operation_0300 . BIND(STRLEN(REPLACE(SUBSTR(?templateMotifCigarG3FFN6MF_04166503, 1, (STRLEN(?templateMotifCigarG3FFN6MF_04166503) - STRLEN(REPLACE(?templateMotifCigarG3FFN6MF_04166503, CONCAT('^(?:-*[^-]){', STR(((297 - ?templateMotifSequenceMatchBeginPositionG3FFN6504) + 1)), '}'), '')))), '[a-z]', '')) AS ?step1515) . BIND((STRLEN(SUBSTR(?targetMotifMatchCigarG3FFN6MF_04166505, 1, (STRLEN(?targetMotifMatchCigarG3FFN6MF_04166505) - STRLEN(REPLACE(?targetMotifMatchCigarG3FFN6MF_04166505, CONCAT('^(?:[a-z]*(?:[A-Z]|-)){', STR(?step1515), '}'), ''))))) - STRLEN(REPLACE(SUBSTR(?targetMotifMatchCigarG3FFN6MF_04166505, 1, (STRLEN(?targetMotifMatchCigarG3FFN6MF_04166505) - STRLEN(REPLACE(?targetMotifMatchCigarG3FFN6MF_04166505, CONCAT('^(?:[a-z]*(?:[A-Z]|-)){', STR(?step1515), '}'), '')))), '[^-]', ''))) AS ?step2516) . BIND(((?step2516 + ?targetMotifMatchRegionMatchBeginPositionMF_04166506) - 1) AS ?thisPositionOn173) . BIND(?thisPositionOn173 AS ?thisPositionOn174) . BIND(?this AS ?pfs2t517) . BIND(URI(CONCAT(STR(?thisSequence), '#position', STR(?thisPositionOn173))) AS ?pfsb170) . BIND(URI(CONCAT(STR(?thisSequence), '#position', STR(?thisPositionOn174))) AS ?pfse171) . FILTER ((SUBSTR(?thisSequenceValue, ?thisPositionOn173, 1) = 'N')) . BIND(URI(CONCAT(STR(?this), '#MF_04166a169')) AS ?annotation169) . BIND(?this AS ?pfs168) . } OPTIONAL { ?this up:sequence ?thisSequence . ?thisSequence rdf:value ?thisSequenceValue . ?templateMotifMatch522 faldo:location ?templateMotifSequenceMatchRegionG3FFN6523 ; edam:is_output_of ?templateMotifSequenceProfileAlignmentOperationG3FFN6525 ; rdf:type edam:data_0869 ; rdf:value ?templateMotifCigarG3FFN6MF_04166518 . ?templateMotifSequenceMatchRegionG3FFN6523 faldo:begin ?templateMotifSequenceMatchBeginG3FFN6524 . ?templateMotifSequenceMatchBeginG3FFN6524 faldo:position ?templateMotifSequenceMatchBeginPositionG3FFN6519 ; faldo:reference isoform:G3FFN6-1 . ?templateMotifSequenceProfileAlignmentOperationG3FFN6525 edam:has_input signature:MF_04166 ; rdf:type edam:operation_0300 . ?targetMotifMatch526 faldo:location ?targetMotifMatchRegionMatch527 ; edam:is_output_of ?targetMotifSequenceAlignmentOperationMF_04166529 ; rdf:type edam:data_0869 ; rdf:value ?targetMotifMatchCigarG3FFN6MF_04166520 . ?targetMotifMatchRegionMatch527 faldo:begin ?targetMotifMatchRegionMatchBeginMF_04166528 . ?targetMotifMatchRegionMatchBeginMF_04166528 faldo:position ?targetMotifMatchRegionMatchBeginPositionMF_04166521 ; faldo:reference ?thisSequence . ?targetMotifSequenceAlignmentOperationMF_04166529 edam:has_input signature:MF_04166 ; rdf:type edam:operation_0300 . BIND(STRLEN(REPLACE(SUBSTR(?templateMotifCigarG3FFN6MF_04166518, 1, (STRLEN(?templateMotifCigarG3FFN6MF_04166518) - STRLEN(REPLACE(?templateMotifCigarG3FFN6MF_04166518, CONCAT('^(?:-*[^-]){', STR(((330 - ?templateMotifSequenceMatchBeginPositionG3FFN6519) + 1)), '}'), '')))), '[a-z]', '')) AS ?step1530) . BIND((STRLEN(SUBSTR(?targetMotifMatchCigarG3FFN6MF_04166520, 1, (STRLEN(?targetMotifMatchCigarG3FFN6MF_04166520) - STRLEN(REPLACE(?targetMotifMatchCigarG3FFN6MF_04166520, CONCAT('^(?:[a-z]*(?:[A-Z]|-)){', STR(?step1530), '}'), ''))))) - STRLEN(REPLACE(SUBSTR(?targetMotifMatchCigarG3FFN6MF_04166520, 1, (STRLEN(?targetMotifMatchCigarG3FFN6MF_04166520) - STRLEN(REPLACE(?targetMotifMatchCigarG3FFN6MF_04166520, CONCAT('^(?:[a-z]*(?:[A-Z]|-)){', STR(?step1530), '}'), '')))), '[^-]', ''))) AS ?step2531) . BIND(((?step2531 + ?targetMotifMatchRegionMatchBeginPositionMF_04166521) - 1) AS ?thisPositionOn180) . BIND(?thisPositionOn180 AS ?thisPositionOn181) . BIND(?this AS ?pfs2t532) . BIND(URI(CONCAT(STR(?thisSequence), '#position', STR(?thisPositionOn180))) AS ?pfsb177) . BIND(URI(CONCAT(STR(?thisSequence), '#position', STR(?thisPositionOn181))) AS ?pfse178) . FILTER ((SUBSTR(?thisSequenceValue, ?thisPositionOn180, 1) = 'G')) . BIND(URI(CONCAT(STR(?this), '#MF_04166a176')) AS ?annotation176) . BIND(?this AS ?pfs175) . } OPTIONAL { ?this a up:Protein . BIND(?this AS ?caseWithTag533) . } BIND(IF(BOUND(?tagFTGRP_1), ?caseWithTag533, ?UNBOUND_VARIABLE) AS ?case9) . }