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| Subject | Predicate | Object |
|---|---|---|
| http://purl.uniprot.org/unirules/MF_00027#construct | https://hamap.expasy.org/rdf/vocab#addsTriple | http://purl.uniprot.org/unirules/MF_00027#construct-template-81 |
| http://purl.uniprot.org/unirules/MF_00027#construct | https://hamap.expasy.org/rdf/vocab#addsTriple | http://purl.uniprot.org/unirules/MF_00027#construct-template-84 |
| http://purl.uniprot.org/unirules/MF_00027#construct | https://hamap.expasy.org/rdf/vocab#addsTriple | http://purl.uniprot.org/unirules/MF_00027#construct-template-60 |
| http://purl.uniprot.org/unirules/MF_00027#construct | https://hamap.expasy.org/rdf/vocab#addsTriple | http://purl.uniprot.org/unirules/MF_00027#construct-template-83 |
| http://purl.uniprot.org/unirules/MF_00027#construct | https://hamap.expasy.org/rdf/vocab#addsTriple | http://purl.uniprot.org/unirules/MF_00027#construct-template-62 |
| http://purl.uniprot.org/unirules/MF_00027#construct | https://hamap.expasy.org/rdf/vocab#addsTriple | http://purl.uniprot.org/unirules/MF_00027#construct-template-86 |
| http://purl.uniprot.org/unirules/MF_00027#construct | https://hamap.expasy.org/rdf/vocab#addsTriple | http://purl.uniprot.org/unirules/MF_00027#construct-template-61 |
| http://purl.uniprot.org/unirules/MF_00027#construct | https://hamap.expasy.org/rdf/vocab#addsTriple | http://purl.uniprot.org/unirules/MF_00027#construct-template-85 |
| http://purl.uniprot.org/unirules/MF_00027#construct | https://hamap.expasy.org/rdf/vocab#addsTriple | http://purl.uniprot.org/unirules/MF_00027#construct-template-88 |
| http://purl.uniprot.org/unirules/MF_00027#construct | https://hamap.expasy.org/rdf/vocab#addsTriple | http://purl.uniprot.org/unirules/MF_00027#construct-template-64 |
| http://purl.uniprot.org/unirules/MF_00027#construct | https://hamap.expasy.org/rdf/vocab#addsTriple | http://purl.uniprot.org/unirules/MF_00027#construct-template-87 |
| http://purl.uniprot.org/unirules/MF_00027#construct | https://hamap.expasy.org/rdf/vocab#addsTriple | http://purl.uniprot.org/unirules/MF_00027#construct-template-63 |
| http://purl.uniprot.org/unirules/MF_00027#construct | https://hamap.expasy.org/rdf/vocab#addsTriple | http://purl.uniprot.org/unirules/MF_00027#construct-template-80 |
| http://purl.uniprot.org/unirules/MF_00027#construct | http://www.w3.org/ns/shacl#prefixes | http://purl.uniprot.org/unirules/ |
| http://purl.uniprot.org/unirules/MF_00027#construct | http://spinrdf.org/sp#where | http://purl.uniprot.org/unirules/MF_00027#construct-where-list-0 |
| http://purl.uniprot.org/unirules/MF_00027#construct | http://spinrdf.org/sp#templates | http://purl.uniprot.org/unirules/MF_00027#construct-template-list-0 |
| http://purl.uniprot.org/unirules/MF_00027#construct | http://www.w3.org/ns/shacl#construct | "CONSTRUCT { _:11392 up:source unirule:MF_00027 . _:11393 up:source unirule:MF_00027 . _:11394 up:source unirule:MF_00027 . _:11395 up:source unirule:MF_00027 . _:11396 up:source unirule:MF_00027 . _:11397 up:source unirule:MF_00027 . _:11398 up:source unirule:MF_00027 . _:11399 up:source unirule:MF_00027 . _:11400 up:source unirule:MF_00027 . _:11401 up:source unirule:MF_00027 . _:11402 up:source unirule:MF_00027 . _:11403 up:source unirule:MF_00027 . _:11404 up:source unirule:MF_00027 . _:11405 up:source unirule:MF_00027 . _:11406 up:source unirule:MF_00027 . _:11407 up:source unirule:MF_00027 . _:11408 up:source unirule:MF_00027 . _:11409 up:source unirule:MF_00027 . _:11410 up:source unirule:MF_00027 . _:11411 up:source unirule:MF_00027 . _:11412 up:source unirule:MF_00027 . _:11413 up:source unirule:MF_00027 . _:11414 up:source unirule:MF_00027 . ?this up:annotation ?annotation0 , ?annotation1 ; up:classifiedWith GO:0005524 , GO:0009236 , keyword:169 , keyword:315 , keyword:436 , keyword:460 , keyword:547 , keyword:67 . ?annotation0 up:cofactor chebi:18420 ; rdf:type up:Cofactor_Annotation . ?annotation1 a up:Similarity_Annotation ; rdfs:comment 'Belongs to the CobB/CbiA family.' . ?case2 up:alternativeName ?name4 , ?name5 , ?name6 ; up:classifiedWith keyword:484 ; up:recommendedName ?name3 . ?name3 up:ecName '6.3.5.11' ; up:fullName 'Cobyrinate a,c-diamide synthase' ; rdf:type up:Structured_Name . ?name4 up:fullName 'Cobyrinic acid a,c-diamide synthetase' ; rdf:type up:Structured_Name . ?name5 up:ecName '6.3.5.12' ; up:fullName 'Ni-sirohydrochlorin a,c-diamide synthase' ; rdf:type up:Structured_Name . ?name6 up:fullName 'Ni-sirohydrochlorin a,c-diamide synthetase' ; rdf:type up:Structured_Name . ?case7 up:alternativeName ?name9 ; up:classifiedWith GO:0043802 ; up:recommendedName ?name8 . ?name8 up:ecName '6.3.5.9' ; up:fullName 'Hydrogenobyrinate a,c-diamide synthase' ; rdf:type up:Structured_Name . ?name9 up:fullName 'Hydrogenobyrinic acid a,c-diamide synthase' ; rdf:type up:Structured_Name . ?case10 up:classifiedWith GO:0042242 . ?case11 up:alternativeName ?name13 ; up:recommendedName ?name12 . ?name12 up:ecName '6.3.5.11' ; up:fullName 'Cobyrinate a,c-diamide synthase' ; rdf:type up:Structured_Name . ?name13 up:fullName 'Cobyrinic acid a,c-diamide synthetase' ; rdf:type up:Structured_Name . ?pfs14 up:annotation ?annotation15 . ?annotation15 faldo:begin ?pfsb16 ; faldo:end ?pfse17 ; rdf:type up:Active_Site_Annotation ; rdfs:comment 'Nucleophile' . ?pfsb16 faldo:position ?thisPositionOn18 ; rdf:type faldo:ExactPosition . ?pfse17 faldo:position ?thisPositionOn19 ; rdf:type faldo:ExactPosition . ?pfs20 up:annotation ?annotation21 . ?annotation21 faldo:begin ?pfsb22 ; faldo:end ?pfse23 ; rdf:type up:Site_Annotation ; rdfs:comment 'Increases nucleophilicity of active site Cys' . ?pfsb22 faldo:position ?thisPositionOn24 ; rdf:type faldo:ExactPosition . ?pfse23 faldo:position ?thisPositionOn25 ; rdf:type faldo:ExactPosition . _:11415 a rdf:Statement ; up:attribution _:11392 ; rdf:subject ?this ; rdf:predicate up:annotation ; rdf:object ?annotation0 . _:11416 a rdf:Statement ; up:attribution _:11393 ; rdf:subject ?this ; rdf:predicate up:annotation ; rdf:object ?annotation1 . _:11417 a rdf:Statement ; up:attribution _:11394 ; rdf:subject ?this ; rdf:predicate up:classifiedWith ; rdf:object keyword:169 . _:11418 a rdf:Statement ; up:attribution _:11395 ; rdf:subject ?this ; rdf:predicate up:classifiedWith ; rdf:object keyword:315 . _:11419 a rdf:Statement ; up:attribution _:11396 ; rdf:subject ?this ; rdf:predicate up:classifiedWith ; rdf:object keyword:67 . _:11420 a rdf:Statement ; up:attribution _:11397 ; rdf:subject ?this ; rdf:predicate up:classifiedWith ; rdf:object keyword:547 . _:11421 a rdf:Statement ; up:attribution _:11398 ; rdf:subject ?this ; rdf:predicate up:classifiedWith ; rdf:object keyword:436 . _:11422 a rdf:Statement ; up:attribution _:11399 ; rdf:subject ?this ; rdf:predicate up:classifiedWith ; rdf:object keyword:460 . _:11423 a rdf:Statement ; up:attribution _:11400 ; rdf:subject ?this ; rdf:predicate up:classifiedWith ; rdf:object GO:0005524 . _:11424 a rdf:Statement ; up:attribution _:11401 ; rdf:subject ?this ; rdf:predicate up:classifiedWith ; rdf:object GO:0009236 . _:11425 a rdf:Statement ; up:attribution _:11402 ; rdf:subject ?case2 ; rdf:predicate up:recommendedName ; rdf:object ?name3 . _:11426 a rdf:Statement ; up:attribution _:11403 ; rdf:subject ?case2 ; rdf:predicate up:alternativeName ; rdf:object ?name4 . _:11427 a rdf:Statement ; up:attribution _:11404 ; rdf:subject ?case2 ; rdf:predicate up:alternativeName ; rdf:object ?name5 . _:11428 a rdf:Statement ; up:attribution _:11405 ; rdf:subject ?case2 ; rdf:predicate up:alternativeName ; rdf:object ?name6 . _:11429 a rdf:Statement ; up:attribution _:11406 ; rdf:subject ?case2 ; rdf:predicate up:classifiedWith ; rdf:object keyword:484 . _:11430 a rdf:Statement ; up:attribution _:11407 ; rdf:subject ?case7 ; rdf:predicate up:recommendedName ; rdf:object ?name8 . _:11431 a rdf:Statement ; up:attribution _:11408 ; rdf:subject ?case7 ; rdf:predicate up:alternativeName ; rdf:object ?name9 . _:11432 a rdf:Statement ; up:attribution _:11409 ; rdf:subject ?case7 ; rdf:predicate up:classifiedWith ; rdf:object GO:0043802 . _:11433 a rdf:Statement ; up:attribution _:11410 ; rdf:subject ?case10 ; rdf:predicate up:classifiedWith ; rdf:object GO:0042242 . _:11434 a rdf:Statement ; up:attribution _:11411 ; rdf:subject ?case11 ; rdf:predicate up:recommendedName ; rdf:object ?name12 . _:11435 a rdf:Statement ; up:attribution _:11412 ; rdf:subject ?case11 ; rdf:predicate up:alternativeName ; rdf:object ?name13 . _:11436 a rdf:Statement ; up:source unirule:MF_00027 ; rdf:subject ?pfs14 ; rdf:predicate up:annotation ; rdf:object ?annotation15 . _:11437 a rdf:Statement ; up:attribution _:11413 ; rdf:subject ?pfs14 ; rdf:predicate up:annotation ; rdf:object ?annotation15 . _:11438 a rdf:Statement ; up:source unirule:MF_00027 ; rdf:subject ?pfs20 ; rdf:predicate up:annotation ; rdf:object ?annotation21 . _:11439 a rdf:Statement ; up:attribution _:11414 ; rdf:subject ?pfs20 ; rdf:predicate up:annotation ; rdf:object ?annotation21 . } WHERE { #baseURI: http://purl.uniprot.org/unirule/MF_00027 #Rule MF_00027 Created by:? on:2005-02-28 Modified by:Edouard de Castro on:2024-09-03 VALUES ?supertaxon26 {taxon:2 taxon:2157} ?this up:organism ?thisOrganism ; rdfs:seeAlso signature:MF_00027 . ?thisOrganism rdfs:subClassOf+ ?supertaxon26 . BIND(URI(CONCAT(STR(?this), '#MF_00027a0')) AS ?annotation0) . BIND(URI(CONCAT(STR(?this), '#MF_00027a1')) AS ?annotation1) . OPTIONAL { ?this up:sequence ?thisSequence . ?thisSequence rdf:value ?thisSequenceValue . ?templateMotifMatch31 faldo:location ?templateMotifSequenceMatchRegionP2163232 ; edam:is_output_of ?templateMotifSequenceProfileAlignmentOperationP2163234 ; rdf:type edam:data_0869 ; rdf:value ?templateMotifCigarP21632MF_0002727 . ?templateMotifSequenceMatchRegionP2163232 faldo:begin ?templateMotifSequenceMatchBeginP2163233 . ?templateMotifSequenceMatchBeginP2163233 faldo:position ?templateMotifSequenceMatchBeginPositionP2163228 ; faldo:reference isoform:P21632-1 . ?templateMotifSequenceProfileAlignmentOperationP2163234 edam:has_input signature:MF_00027 ; rdf:type edam:operation_0300 . ?targetMotifMatch35 faldo:location ?targetMotifMatchRegionMatch36 ; edam:is_output_of ?targetMotifSequenceAlignmentOperationMF_0002738 ; rdf:type edam:data_0869 ; rdf:value ?targetMotifMatchCigarP21632MF_0002729 . ?targetMotifMatchRegionMatch36 faldo:begin ?targetMotifMatchRegionMatchBeginMF_0002737 . ?targetMotifMatchRegionMatchBeginMF_0002737 faldo:position ?targetMotifMatchRegionMatchBeginPositionMF_0002730 ; faldo:reference ?thisSequence . ?targetMotifSequenceAlignmentOperationMF_0002738 edam:has_input signature:MF_00027 ; rdf:type edam:operation_0300 . BIND(STRLEN(REPLACE(SUBSTR(?templateMotifCigarP21632MF_0002727, 1, (STRLEN(?templateMotifCigarP21632MF_0002727) - STRLEN(REPLACE(?templateMotifCigarP21632MF_0002727, CONCAT('^(?:-*[^-]){', STR(((326 - ?templateMotifSequenceMatchBeginPositionP2163228) + 1)), '}'), '')))), '[a-z]', '')) AS ?step139) . BIND((STRLEN(SUBSTR(?targetMotifMatchCigarP21632MF_0002729, 1, (STRLEN(?targetMotifMatchCigarP21632MF_0002729) - STRLEN(REPLACE(?targetMotifMatchCigarP21632MF_0002729, CONCAT('^(?:[a-z]*(?:[A-Z]|-)){', STR(?step139), '}'), ''))))) - STRLEN(REPLACE(SUBSTR(?targetMotifMatchCigarP21632MF_0002729, 1, (STRLEN(?targetMotifMatchCigarP21632MF_0002729) - STRLEN(REPLACE(?targetMotifMatchCigarP21632MF_0002729, CONCAT('^(?:[a-z]*(?:[A-Z]|-)){', STR(?step139), '}'), '')))), '[^-]', ''))) AS ?step240) . BIND(((?step240 + ?targetMotifMatchRegionMatchBeginPositionMF_0002730) - 1) AS ?thisPositionOn18) . BIND(?thisPositionOn18 AS ?thisPositionOn19) . BIND(?this AS ?pfs1t41) . BIND(URI(CONCAT(STR(?thisSequence), '#position', STR(?thisPositionOn18))) AS ?pfsb16) . BIND(URI(CONCAT(STR(?thisSequence), '#position', STR(?thisPositionOn19))) AS ?pfse17) . FILTER ((SUBSTR(?thisSequenceValue, ?thisPositionOn18, 1) = 'C')) . BIND(URI(CONCAT(STR(?this), '#MF_00027a15')) AS ?annotation15) . BIND(?this AS ?pfs14) . } OPTIONAL { ?this up:sequence ?thisSequence . ?thisSequence rdf:value ?thisSequenceValue . ?templateMotifMatch46 faldo:location ?templateMotifSequenceMatchRegionP2163247 ; edam:is_output_of ?templateMotifSequenceProfileAlignmentOperationP2163249 ; rdf:type edam:data_0869 ; rdf:value ?templateMotifCigarP21632MF_0002742 . ?templateMotifSequenceMatchRegionP2163247 faldo:begin ?templateMotifSequenceMatchBeginP2163248 . ?templateMotifSequenceMatchBeginP2163248 faldo:position ?templateMotifSequenceMatchBeginPositionP2163243 ; faldo:reference isoform:P21632-1 . ?templateMotifSequenceProfileAlignmentOperationP2163249 edam:has_input signature:MF_00027 ; rdf:type edam:operation_0300 . ?targetMotifMatch50 faldo:location ?targetMotifMatchRegionMatch51 ; edam:is_output_of ?targetMotifSequenceAlignmentOperationMF_0002753 ; rdf:type edam:data_0869 ; rdf:value ?targetMotifMatchCigarP21632MF_0002744 . ?targetMotifMatchRegionMatch51 faldo:begin ?targetMotifMatchRegionMatchBeginMF_0002752 . ?targetMotifMatchRegionMatchBeginMF_0002752 faldo:position ?targetMotifMatchRegionMatchBeginPositionMF_0002745 ; faldo:reference ?thisSequence . ?targetMotifSequenceAlignmentOperationMF_0002753 edam:has_input signature:MF_00027 ; rdf:type edam:operation_0300 . BIND(STRLEN(REPLACE(SUBSTR(?templateMotifCigarP21632MF_0002742, 1, (STRLEN(?templateMotifCigarP21632MF_0002742) - STRLEN(REPLACE(?templateMotifCigarP21632MF_0002742, CONCAT('^(?:-*[^-]){', STR(((426 - ?templateMotifSequenceMatchBeginPositionP2163243) + 1)), '}'), '')))), '[a-z]', '')) AS ?step154) . BIND((STRLEN(SUBSTR(?targetMotifMatchCigarP21632MF_0002744, 1, (STRLEN(?targetMotifMatchCigarP21632MF_0002744) - STRLEN(REPLACE(?targetMotifMatchCigarP21632MF_0002744, CONCAT('^(?:[a-z]*(?:[A-Z]|-)){', STR(?step154), '}'), ''))))) - STRLEN(REPLACE(SUBSTR(?targetMotifMatchCigarP21632MF_0002744, 1, (STRLEN(?targetMotifMatchCigarP21632MF_0002744) - STRLEN(REPLACE(?targetMotifMatchCigarP21632MF_0002744, CONCAT('^(?:[a-z]*(?:[A-Z]|-)){', STR(?step154), '}'), '')))), '[^-]', ''))) AS ?step255) . BIND(((?step255 + ?targetMotifMatchRegionMatchBeginPositionMF_0002745) - 1) AS ?thisPositionOn24) . BIND(?thisPositionOn24 AS ?thisPositionOn25) . BIND(?this AS ?pfs1t56) . BIND(URI(CONCAT(STR(?thisSequence), '#position', STR(?thisPositionOn24))) AS ?pfsb22) . BIND(URI(CONCAT(STR(?thisSequence), '#position', STR(?thisPositionOn25))) AS ?pfse23) . FILTER ((SUBSTR(?thisSequenceValue, ?thisPositionOn24, 1) = 'H')) . BIND(URI(CONCAT(STR(?this), '#MF_00027a21')) AS ?annotation21) . BIND(?this AS ?pfs20) . } OPTIONAL { ?this a up:Protein . VALUES ?supertaxon57 {taxon:183925 taxon:183939 taxon:224756 taxon:183988} ?this up:organism ?thisOrganism . ?thisOrganism rdfs:subClassOf+ ?supertaxon57 . BIND(?this AS ?case2) . BIND(URI(CONCAT(STR(?this), '#MF_00027a3')) AS ?name3) . BIND(URI(CONCAT(STR(?this), '#MF_00027a4')) AS ?name4) . BIND(URI(CONCAT(STR(?this), '#MF_00027a5')) AS ?name5) . BIND(URI(CONCAT(STR(?this), '#MF_00027a6')) AS ?name6) . } OPTIONAL { ?this a up:Protein . VALUES ?supertaxon58 {taxon:356 taxon:204455 taxon:72274 taxon:201174} ?this up:organism ?thisOrganism . ?thisOrganism rdfs:subClassOf+ ?supertaxon58 . BIND(?this AS ?case7) . BIND(URI(CONCAT(STR(?this), '#MF_00027a8')) AS ?name8) . BIND(URI(CONCAT(STR(?this), '#MF_00027a9')) AS ?name9) . } OPTIONAL { ?this a up:Protein . ?this up:organism ?thisOrganism . FILTER (! (EXISTS { VALUES ?supertaxon59 {taxon:356 taxon:204455 taxon:72274 taxon:201174} ?thisOrganism rdfs:subClassOf+ ?supertaxon59 . })) . BIND(?this AS ?case10) . } OPTIONAL { ?this a up:Protein . ?this up:organism ?thisOrganism . FILTER (! (EXISTS { VALUES ?supertaxon60 {taxon:224756 taxon:356 taxon:183988 taxon:72274 taxon:201174 taxon:183939 taxon:183925 taxon:204455} ?thisOrganism rdfs:subClassOf+ ?supertaxon60 . })) . BIND(?this AS ?case11) . BIND(URI(CONCAT(STR(?this), '#MF_00027a12')) AS ?name12) . BIND(URI(CONCAT(STR(?this), '#MF_00027a13')) AS ?name13) . } } "xsd:string |
| http://purl.uniprot.org/unirules/MF_00027 | http://www.w3.org/ns/shacl#rule | http://purl.uniprot.org/unirules/MF_00027#construct |