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| Subject | Predicate | Object |
|---|---|---|
| http://purl.uniprot.org/unirules/MF_00351#construct | https://hamap.expasy.org/rdf/vocab#addsTriple | http://purl.uniprot.org/unirules/MF_00351#construct-template-81 |
| http://purl.uniprot.org/unirules/MF_00351#construct | https://hamap.expasy.org/rdf/vocab#addsTriple | http://purl.uniprot.org/unirules/MF_00351#construct-template-88 |
| http://purl.uniprot.org/unirules/MF_00351#construct | https://hamap.expasy.org/rdf/vocab#addsTriple | http://purl.uniprot.org/unirules/MF_00351#construct-template-86 |
| http://purl.uniprot.org/unirules/MF_00351#construct | https://hamap.expasy.org/rdf/vocab#addsTriple | http://purl.uniprot.org/unirules/MF_00351#construct-template-85 |
| http://purl.uniprot.org/unirules/MF_00351#construct | https://hamap.expasy.org/rdf/vocab#addsTriple | http://purl.uniprot.org/unirules/MF_00351#construct-template-83 |
| http://purl.uniprot.org/unirules/MF_00351#construct | http://www.w3.org/ns/shacl#prefixes | http://purl.uniprot.org/unirules/ |
| http://purl.uniprot.org/unirules/MF_00351#construct | http://spinrdf.org/sp#where | http://purl.uniprot.org/unirules/MF_00351#construct-where-list-0 |
| http://purl.uniprot.org/unirules/MF_00351#construct | http://spinrdf.org/sp#templates | http://purl.uniprot.org/unirules/MF_00351#construct-template-list-0 |
| http://purl.uniprot.org/unirules/MF_00351#construct | http://www.w3.org/ns/shacl#construct | "CONSTRUCT { _:140181 up:source unirule:MF_00351 . _:140182 up:source unirule:MF_00351 . _:140183 up:source unirule:MF_00351 . _:140184 up:source unirule:MF_00351 . _:140185 up:source unirule:MF_00351 . _:140186 up:source unirule:MF_00351 . _:140187 up:source unirule:MF_00351 . _:140188 up:source unirule:MF_00351 . _:140189 up:source unirule:MF_00351 . _:140190 up:source unirule:MF_00351 . _:140191 up:source unirule:MF_00351 . _:140192 up:source unirule:MF_00351 . _:140193 up:source unirule:MF_00351 . _:140194 up:source unirule:MF_00351 . _:140195 up:source unirule:MF_00351 . _:140196 up:source unirule:MF_00351 . _:140197 up:source unirule:MF_00351 . _:140198 up:source unirule:MF_00351 . ?this up:annotation ?annotation2 , ?annotation3 , ?annotation4 ; up:classifiedWith GO:0003723 , GO:0006364 , GO:0008033 , GO:0008168 , keyword:489 , keyword:694 , keyword:698 , keyword:808 , keyword:819 ; up:recommendedName ?name0 . ?name0 up:ecName '2.1.1.-' ; up:fullName "Fibrillarin-like rRNA/tRNA 2'-O-methyltransferase" ; rdf:type up:Structured_Name . ?gene1 skos:prefLabel 'flpA' . ?annotation2 a up:Function_Annotation ; rdfs:comment "Involved in pre-rRNA and tRNA processing. Utilizes the methyl donor S-adenosyl-L-methionine to catalyze the site-specific 2'-hydroxyl methylation of ribose moieties in rRNA and tRNA. Site specificity is provided by a guide RNA that base pairs with the substrate. Methylation occurs at a characteristic distance from the sequence involved in base pairing with the guide RNA." . ?annotation3 a up:Subunit_Annotation ; rdfs:comment 'Interacts with nop5. Component of box C/D small ribonucleoprotein (sRNP) particles that contain rpl7ae, FlpA and nop5, plus a guide RNA.' . ?annotation4 a up:Similarity_Annotation ; rdfs:comment 'Belongs to the methyltransferase superfamily. Fibrillarin family.' . ?pfs5 up:annotation ?annotation6 . ?annotation6 faldo:begin ?pfsb7 ; faldo:end ?pfse8 ; up:ligand ?ligand9 ; rdf:type up:Binding_Site_Annotation . ?pfsb7 faldo:position ?thisPositionOn10 ; rdf:type faldo:ExactPosition . ?pfse8 faldo:position ?thisPositionOn11 ; rdf:type faldo:ExactPosition . ?ligand9 rdfs:subClassOf chebi:59789 . ?pfs12 up:annotation ?annotation13 . ?annotation13 faldo:begin ?pfsb14 ; faldo:end ?pfse15 ; up:ligand ?ligand16 ; rdf:type up:Binding_Site_Annotation . ?pfsb14 faldo:position ?thisPositionOn17 ; rdf:type faldo:ExactPosition . ?pfse15 faldo:position ?thisPositionOn18 ; rdf:type faldo:ExactPosition . ?ligand16 rdfs:subClassOf chebi:59789 . ?pfs19 up:annotation ?annotation20 . ?annotation20 faldo:begin ?pfsb21 ; faldo:end ?pfse22 ; up:ligand ?ligand23 ; rdf:type up:Binding_Site_Annotation . ?pfsb21 faldo:position ?thisPositionOn24 ; rdf:type faldo:ExactPosition . ?pfse22 faldo:position ?thisPositionOn25 ; rdf:type faldo:ExactPosition . ?ligand23 rdfs:subClassOf chebi:59789 . ?pfs26 up:annotation ?annotation27 . ?annotation27 faldo:begin ?pfsb28 ; faldo:end ?pfse29 ; up:ligand ?ligand30 ; rdf:type up:Binding_Site_Annotation . ?pfsb28 faldo:position ?thisPositionOn31 ; rdf:type faldo:ExactPosition . ?pfse29 faldo:position ?thisPositionOn32 ; rdf:type faldo:ExactPosition . ?ligand30 rdfs:subClassOf chebi:59789 . _:140199 a rdf:Statement ; up:attribution _:140181 ; rdf:subject ?this ; rdf:predicate up:recommendedName ; rdf:object ?name0 . _:140200 a rdf:Statement ; up:attribution _:140182 ; rdf:subject ?gene1 ; rdf:predicate up:encodedBy ; rdf:object ?gene1 . _:140201 a rdf:Statement ; up:attribution _:140183 ; rdf:subject ?this ; rdf:predicate up:annotation ; rdf:object ?annotation2 . _:140202 a rdf:Statement ; up:attribution _:140184 ; rdf:subject ?this ; rdf:predicate up:annotation ; rdf:object ?annotation3 . _:140203 a rdf:Statement ; up:attribution _:140185 ; rdf:subject ?this ; rdf:predicate up:annotation ; rdf:object ?annotation4 . _:140204 a rdf:Statement ; up:attribution _:140186 ; rdf:subject ?this ; rdf:predicate up:classifiedWith ; rdf:object keyword:489 . _:140205 a rdf:Statement ; up:attribution _:140187 ; rdf:subject ?this ; rdf:predicate up:classifiedWith ; rdf:object keyword:694 . _:140206 a rdf:Statement ; up:attribution _:140188 ; rdf:subject ?this ; rdf:predicate up:classifiedWith ; rdf:object keyword:698 . _:140207 a rdf:Statement ; up:attribution _:140189 ; rdf:subject ?this ; rdf:predicate up:classifiedWith ; rdf:object keyword:808 . _:140208 a rdf:Statement ; up:attribution _:140190 ; rdf:subject ?this ; rdf:predicate up:classifiedWith ; rdf:object keyword:819 . _:140209 a rdf:Statement ; up:attribution _:140191 ; rdf:subject ?this ; rdf:predicate up:classifiedWith ; rdf:object GO:0003723 . _:140210 a rdf:Statement ; up:attribution _:140192 ; rdf:subject ?this ; rdf:predicate up:classifiedWith ; rdf:object GO:0008168 . _:140211 a rdf:Statement ; up:attribution _:140193 ; rdf:subject ?this ; rdf:predicate up:classifiedWith ; rdf:object GO:0006364 . _:140212 a rdf:Statement ; up:attribution _:140194 ; rdf:subject ?this ; rdf:predicate up:classifiedWith ; rdf:object GO:0008033 . _:140213 a rdf:Statement ; up:source unirule:MF_00351 ; rdf:subject ?pfs5 ; rdf:predicate up:annotation ; rdf:object ?annotation6 . _:140214 a rdf:Statement ; up:attribution _:140195 ; rdf:subject ?pfs5 ; rdf:predicate up:annotation ; rdf:object ?annotation6 . _:140215 a rdf:Statement ; up:source unirule:MF_00351 ; rdf:subject ?pfs12 ; rdf:predicate up:annotation ; rdf:object ?annotation13 . _:140216 a rdf:Statement ; up:attribution _:140196 ; rdf:subject ?pfs12 ; rdf:predicate up:annotation ; rdf:object ?annotation13 . _:140217 a rdf:Statement ; up:source unirule:MF_00351 ; rdf:subject ?pfs19 ; rdf:predicate up:annotation ; rdf:object ?annotation20 . _:140218 a rdf:Statement ; up:attribution _:140197 ; rdf:subject ?pfs19 ; rdf:predicate up:annotation ; rdf:object ?annotation20 . _:140219 a rdf:Statement ; up:source unirule:MF_00351 ; rdf:subject ?pfs26 ; rdf:predicate up:annotation ; rdf:object ?annotation27 . _:140220 a rdf:Statement ; up:attribution _:140198 ; rdf:subject ?pfs26 ; rdf:predicate up:annotation ; rdf:object ?annotation27 . } WHERE { #baseURI: http://purl.uniprot.org/unirule/MF_00351 #Rule MF_00351 Created by:? on:2005-02-28 Modified by:Edouard de Castro on:2022-11-19 ?this up:organism ?thisOrganism ; rdfs:seeAlso signature:MF_00351 . ?thisOrganism rdfs:subClassOf+ taxon:2157 . BIND(URI(CONCAT(STR(?this), '#MF_00351a0')) AS ?name0) . BIND(URI(CONCAT(STR(?this), '#MF_00351a2')) AS ?annotation2) . BIND(URI(CONCAT(STR(?this), '#MF_00351a3')) AS ?annotation3) . BIND(URI(CONCAT(STR(?this), '#MF_00351a4')) AS ?annotation4) . OPTIONAL { ?this up:sequence ?thisSequence . ?thisSequence rdf:value ?thisSequenceValue . ?templateMotifMatch37 faldo:location ?templateMotifSequenceMatchRegionQ9Y9U338 ; edam:is_output_of ?templateMotifSequenceProfileAlignmentOperationQ9Y9U340 ; rdf:type edam:data_0869 ; rdf:value ?templateMotifCigarQ9Y9U3MF_0035133 . ?templateMotifSequenceMatchRegionQ9Y9U338 faldo:begin ?templateMotifSequenceMatchBeginQ9Y9U339 . ?templateMotifSequenceMatchBeginQ9Y9U339 faldo:position ?templateMotifSequenceMatchBeginPositionQ9Y9U334 ; faldo:reference isoform:Q9Y9U3-1 . ?templateMotifSequenceProfileAlignmentOperationQ9Y9U340 edam:has_input signature:MF_00351 ; rdf:type edam:operation_0300 . ?targetMotifMatch41 faldo:location ?targetMotifMatchRegionMatch42 ; edam:is_output_of ?targetMotifSequenceAlignmentOperationMF_0035144 ; rdf:type edam:data_0869 ; rdf:value ?targetMotifMatchCigarQ9Y9U3MF_0035135 . ?targetMotifMatchRegionMatch42 faldo:begin ?targetMotifMatchRegionMatchBeginMF_0035143 . ?targetMotifMatchRegionMatchBeginMF_0035143 faldo:position ?targetMotifMatchRegionMatchBeginPositionMF_0035136 ; faldo:reference ?thisSequence . ?targetMotifSequenceAlignmentOperationMF_0035144 edam:has_input signature:MF_00351 ; rdf:type edam:operation_0300 . BIND(STRLEN(REPLACE(SUBSTR(?templateMotifCigarQ9Y9U3MF_0035133, 1, (STRLEN(?templateMotifCigarQ9Y9U3MF_0035133) - STRLEN(REPLACE(?templateMotifCigarQ9Y9U3MF_0035133, CONCAT('^(?:-*[^-]){', STR(((90 - ?templateMotifSequenceMatchBeginPositionQ9Y9U334) + 1)), '}'), '')))), '[a-z]', '')) AS ?step145) . BIND((STRLEN(SUBSTR(?targetMotifMatchCigarQ9Y9U3MF_0035135, 1, (STRLEN(?targetMotifMatchCigarQ9Y9U3MF_0035135) - STRLEN(REPLACE(?targetMotifMatchCigarQ9Y9U3MF_0035135, CONCAT('^(?:[a-z]*(?:[A-Z]|-)){', STR(?step145), '}'), ''))))) - STRLEN(REPLACE(SUBSTR(?targetMotifMatchCigarQ9Y9U3MF_0035135, 1, (STRLEN(?targetMotifMatchCigarQ9Y9U3MF_0035135) - STRLEN(REPLACE(?targetMotifMatchCigarQ9Y9U3MF_0035135, CONCAT('^(?:[a-z]*(?:[A-Z]|-)){', STR(?step145), '}'), '')))), '[^-]', ''))) AS ?step246) . BIND(((?step246 + ?targetMotifMatchRegionMatchBeginPositionMF_0035136) - 1) AS ?thisPositionOn10) . BIND(STRLEN(REPLACE(SUBSTR(?templateMotifCigarQ9Y9U3MF_0035133, 1, (STRLEN(?templateMotifCigarQ9Y9U3MF_0035133) - STRLEN(REPLACE(?templateMotifCigarQ9Y9U3MF_0035133, CONCAT('^(?:-*[^-]){', STR(((91 - ?templateMotifSequenceMatchBeginPositionQ9Y9U334) + 1)), '}'), '')))), '[a-z]', '')) AS ?step147) . BIND((STRLEN(SUBSTR(?targetMotifMatchCigarQ9Y9U3MF_0035135, 1, (STRLEN(?targetMotifMatchCigarQ9Y9U3MF_0035135) - STRLEN(REPLACE(?targetMotifMatchCigarQ9Y9U3MF_0035135, CONCAT('^(?:[a-z]*(?:[A-Z]|-)){', STR(?step147), '}'), ''))))) - STRLEN(REPLACE(SUBSTR(?targetMotifMatchCigarQ9Y9U3MF_0035135, 1, (STRLEN(?targetMotifMatchCigarQ9Y9U3MF_0035135) - STRLEN(REPLACE(?targetMotifMatchCigarQ9Y9U3MF_0035135, CONCAT('^(?:[a-z]*(?:[A-Z]|-)){', STR(?step147), '}'), '')))), '[^-]', ''))) AS ?step248) . BIND(((?step248 + ?targetMotifMatchRegionMatchBeginPositionMF_0035136) - 1) AS ?thisPositionOn11) . BIND(?this AS ?pfs1t49) . BIND(URI(CONCAT(STR(?thisSequence), '#position', STR(?thisPositionOn10))) AS ?pfsb7) . BIND(URI(CONCAT(STR(?thisSequence), '#position', STR(?thisPositionOn11))) AS ?pfse8) . FILTER (REGEX('[TS]T', SUBSTR(?thisSequenceValue, ?thisPositionOn10, (?thisPositionOn11 - ?thisPositionOn10)))) . BIND(URI(CONCAT(STR(?this), '#MF_00351a6')) AS ?annotation6) . BIND(?this AS ?pfs5) . } OPTIONAL { ?this up:sequence ?thisSequence . ?thisSequence rdf:value ?thisSequenceValue . ?templateMotifMatch54 faldo:location ?templateMotifSequenceMatchRegionQ9Y9U355 ; edam:is_output_of ?templateMotifSequenceProfileAlignmentOperationQ9Y9U357 ; rdf:type edam:data_0869 ; rdf:value ?templateMotifCigarQ9Y9U3MF_0035150 . ?templateMotifSequenceMatchRegionQ9Y9U355 faldo:begin ?templateMotifSequenceMatchBeginQ9Y9U356 . ?templateMotifSequenceMatchBeginQ9Y9U356 faldo:position ?templateMotifSequenceMatchBeginPositionQ9Y9U351 ; faldo:reference isoform:Q9Y9U3-1 . ?templateMotifSequenceProfileAlignmentOperationQ9Y9U357 edam:has_input signature:MF_00351 ; rdf:type edam:operation_0300 . ?targetMotifMatch58 faldo:location ?targetMotifMatchRegionMatch59 ; edam:is_output_of ?targetMotifSequenceAlignmentOperationMF_0035161 ; rdf:type edam:data_0869 ; rdf:value ?targetMotifMatchCigarQ9Y9U3MF_0035152 . ?targetMotifMatchRegionMatch59 faldo:begin ?targetMotifMatchRegionMatchBeginMF_0035160 . ?targetMotifMatchRegionMatchBeginMF_0035160 faldo:position ?targetMotifMatchRegionMatchBeginPositionMF_0035153 ; faldo:reference ?thisSequence . ?targetMotifSequenceAlignmentOperationMF_0035161 edam:has_input signature:MF_00351 ; rdf:type edam:operation_0300 . BIND(STRLEN(REPLACE(SUBSTR(?templateMotifCigarQ9Y9U3MF_0035150, 1, (STRLEN(?templateMotifCigarQ9Y9U3MF_0035150) - STRLEN(REPLACE(?templateMotifCigarQ9Y9U3MF_0035150, CONCAT('^(?:-*[^-]){', STR(((109 - ?templateMotifSequenceMatchBeginPositionQ9Y9U351) + 1)), '}'), '')))), '[a-z]', '')) AS ?step162) . BIND((STRLEN(SUBSTR(?targetMotifMatchCigarQ9Y9U3MF_0035152, 1, (STRLEN(?targetMotifMatchCigarQ9Y9U3MF_0035152) - STRLEN(REPLACE(?targetMotifMatchCigarQ9Y9U3MF_0035152, CONCAT('^(?:[a-z]*(?:[A-Z]|-)){', STR(?step162), '}'), ''))))) - STRLEN(REPLACE(SUBSTR(?targetMotifMatchCigarQ9Y9U3MF_0035152, 1, (STRLEN(?targetMotifMatchCigarQ9Y9U3MF_0035152) - STRLEN(REPLACE(?targetMotifMatchCigarQ9Y9U3MF_0035152, CONCAT('^(?:[a-z]*(?:[A-Z]|-)){', STR(?step162), '}'), '')))), '[^-]', ''))) AS ?step263) . BIND(((?step263 + ?targetMotifMatchRegionMatchBeginPositionMF_0035153) - 1) AS ?thisPositionOn17) . BIND(STRLEN(REPLACE(SUBSTR(?templateMotifCigarQ9Y9U3MF_0035150, 1, (STRLEN(?templateMotifCigarQ9Y9U3MF_0035150) - STRLEN(REPLACE(?templateMotifCigarQ9Y9U3MF_0035150, CONCAT('^(?:-*[^-]){', STR(((110 - ?templateMotifSequenceMatchBeginPositionQ9Y9U351) + 1)), '}'), '')))), '[a-z]', '')) AS ?step164) . BIND((STRLEN(SUBSTR(?targetMotifMatchCigarQ9Y9U3MF_0035152, 1, (STRLEN(?targetMotifMatchCigarQ9Y9U3MF_0035152) - STRLEN(REPLACE(?targetMotifMatchCigarQ9Y9U3MF_0035152, CONCAT('^(?:[a-z]*(?:[A-Z]|-)){', STR(?step164), '}'), ''))))) - STRLEN(REPLACE(SUBSTR(?targetMotifMatchCigarQ9Y9U3MF_0035152, 1, (STRLEN(?targetMotifMatchCigarQ9Y9U3MF_0035152) - STRLEN(REPLACE(?targetMotifMatchCigarQ9Y9U3MF_0035152, CONCAT('^(?:[a-z]*(?:[A-Z]|-)){', STR(?step164), '}'), '')))), '[^-]', ''))) AS ?step265) . BIND(((?step265 + ?targetMotifMatchRegionMatchBeginPositionMF_0035153) - 1) AS ?thisPositionOn18) . BIND(?this AS ?pfs1t66) . BIND(URI(CONCAT(STR(?thisSequence), '#position', STR(?thisPositionOn17))) AS ?pfsb14) . BIND(URI(CONCAT(STR(?thisSequence), '#position', STR(?thisPositionOn18))) AS ?pfse15) . FILTER (REGEX('[ED][ARNDCQEGHILKMFPSTWYVBZJUOX]', SUBSTR(?thisSequenceValue, ?thisPositionOn17, (?thisPositionOn18 - ?thisPositionOn17)))) . BIND(URI(CONCAT(STR(?this), '#MF_00351a13')) AS ?annotation13) . BIND(?this AS ?pfs12) . } OPTIONAL { ?this up:sequence ?thisSequence . ?thisSequence rdf:value ?thisSequenceValue . ?templateMotifMatch71 faldo:location ?templateMotifSequenceMatchRegionQ9Y9U372 ; edam:is_output_of ?templateMotifSequenceProfileAlignmentOperationQ9Y9U374 ; rdf:type edam:data_0869 ; rdf:value ?templateMotifCigarQ9Y9U3MF_0035167 . ?templateMotifSequenceMatchRegionQ9Y9U372 faldo:begin ?templateMotifSequenceMatchBeginQ9Y9U373 . ?templateMotifSequenceMatchBeginQ9Y9U373 faldo:position ?templateMotifSequenceMatchBeginPositionQ9Y9U368 ; faldo:reference isoform:Q9Y9U3-1 . ?templateMotifSequenceProfileAlignmentOperationQ9Y9U374 edam:has_input signature:MF_00351 ; rdf:type edam:operation_0300 . ?targetMotifMatch75 faldo:location ?targetMotifMatchRegionMatch76 ; edam:is_output_of ?targetMotifSequenceAlignmentOperationMF_0035178 ; rdf:type edam:data_0869 ; rdf:value ?targetMotifMatchCigarQ9Y9U3MF_0035169 . ?targetMotifMatchRegionMatch76 faldo:begin ?targetMotifMatchRegionMatchBeginMF_0035177 . ?targetMotifMatchRegionMatchBeginMF_0035177 faldo:position ?targetMotifMatchRegionMatchBeginPositionMF_0035170 ; faldo:reference ?thisSequence . ?targetMotifSequenceAlignmentOperationMF_0035178 edam:has_input signature:MF_00351 ; rdf:type edam:operation_0300 . BIND(STRLEN(REPLACE(SUBSTR(?templateMotifCigarQ9Y9U3MF_0035167, 1, (STRLEN(?templateMotifCigarQ9Y9U3MF_0035167) - STRLEN(REPLACE(?templateMotifCigarQ9Y9U3MF_0035167, CONCAT('^(?:-*[^-]){', STR(((134 - ?templateMotifSequenceMatchBeginPositionQ9Y9U368) + 1)), '}'), '')))), '[a-z]', '')) AS ?step179) . BIND((STRLEN(SUBSTR(?targetMotifMatchCigarQ9Y9U3MF_0035169, 1, (STRLEN(?targetMotifMatchCigarQ9Y9U3MF_0035169) - STRLEN(REPLACE(?targetMotifMatchCigarQ9Y9U3MF_0035169, CONCAT('^(?:[a-z]*(?:[A-Z]|-)){', STR(?step179), '}'), ''))))) - STRLEN(REPLACE(SUBSTR(?targetMotifMatchCigarQ9Y9U3MF_0035169, 1, (STRLEN(?targetMotifMatchCigarQ9Y9U3MF_0035169) - STRLEN(REPLACE(?targetMotifMatchCigarQ9Y9U3MF_0035169, CONCAT('^(?:[a-z]*(?:[A-Z]|-)){', STR(?step179), '}'), '')))), '[^-]', ''))) AS ?step280) . BIND(((?step280 + ?targetMotifMatchRegionMatchBeginPositionMF_0035170) - 1) AS ?thisPositionOn24) . BIND(STRLEN(REPLACE(SUBSTR(?templateMotifCigarQ9Y9U3MF_0035167, 1, (STRLEN(?templateMotifCigarQ9Y9U3MF_0035167) - STRLEN(REPLACE(?templateMotifCigarQ9Y9U3MF_0035167, CONCAT('^(?:-*[^-]){', STR(((135 - ?templateMotifSequenceMatchBeginPositionQ9Y9U368) + 1)), '}'), '')))), '[a-z]', '')) AS ?step181) . BIND((STRLEN(SUBSTR(?targetMotifMatchCigarQ9Y9U3MF_0035169, 1, (STRLEN(?targetMotifMatchCigarQ9Y9U3MF_0035169) - STRLEN(REPLACE(?targetMotifMatchCigarQ9Y9U3MF_0035169, CONCAT('^(?:[a-z]*(?:[A-Z]|-)){', STR(?step181), '}'), ''))))) - STRLEN(REPLACE(SUBSTR(?targetMotifMatchCigarQ9Y9U3MF_0035169, 1, (STRLEN(?targetMotifMatchCigarQ9Y9U3MF_0035169) - STRLEN(REPLACE(?targetMotifMatchCigarQ9Y9U3MF_0035169, CONCAT('^(?:[a-z]*(?:[A-Z]|-)){', STR(?step181), '}'), '')))), '[^-]', ''))) AS ?step282) . BIND(((?step282 + ?targetMotifMatchRegionMatchBeginPositionMF_0035170) - 1) AS ?thisPositionOn25) . BIND(?this AS ?pfs1t83) . BIND(URI(CONCAT(STR(?thisSequence), '#position', STR(?thisPositionOn24))) AS ?pfsb21) . BIND(URI(CONCAT(STR(?thisSequence), '#position', STR(?thisPositionOn25))) AS ?pfse22) . FILTER (REGEX('[DN][AS]', SUBSTR(?thisSequenceValue, ?thisPositionOn24, (?thisPositionOn25 - ?thisPositionOn24)))) . BIND(URI(CONCAT(STR(?this), '#MF_00351a20')) AS ?annotation20) . BIND(?this AS ?pfs19) . } OPTIONAL { ?this up:sequence ?thisSequence . ?thisSequence rdf:value ?thisSequenceValue . ?templateMotifMatch88 faldo:location ?templateMotifSequenceMatchRegionQ9Y9U389 ; edam:is_output_of ?templateMotifSequenceProfileAlignmentOperationQ9Y9U391 ; rdf:type edam:data_0869 ; rdf:value ?templateMotifCigarQ9Y9U3MF_0035184 . ?templateMotifSequenceMatchRegionQ9Y9U389 faldo:begin ?templateMotifSequenceMatchBeginQ9Y9U390 . ?templateMotifSequenceMatchBeginQ9Y9U390 faldo:position ?templateMotifSequenceMatchBeginPositionQ9Y9U385 ; faldo:reference isoform:Q9Y9U3-1 . ?templateMotifSequenceProfileAlignmentOperationQ9Y9U391 edam:has_input signature:MF_00351 ; rdf:type edam:operation_0300 . ?targetMotifMatch92 faldo:location ?targetMotifMatchRegionMatch93 ; edam:is_output_of ?targetMotifSequenceAlignmentOperationMF_0035195 ; rdf:type edam:data_0869 ; rdf:value ?targetMotifMatchCigarQ9Y9U3MF_0035186 . ?targetMotifMatchRegionMatch93 faldo:begin ?targetMotifMatchRegionMatchBeginMF_0035194 . ?targetMotifMatchRegionMatchBeginMF_0035194 faldo:position ?targetMotifMatchRegionMatchBeginPositionMF_0035187 ; faldo:reference ?thisSequence . ?targetMotifSequenceAlignmentOperationMF_0035195 edam:has_input signature:MF_00351 ; rdf:type edam:operation_0300 . BIND(STRLEN(REPLACE(SUBSTR(?templateMotifCigarQ9Y9U3MF_0035184, 1, (STRLEN(?templateMotifCigarQ9Y9U3MF_0035184) - STRLEN(REPLACE(?templateMotifCigarQ9Y9U3MF_0035184, CONCAT('^(?:-*[^-]){', STR(((154 - ?templateMotifSequenceMatchBeginPositionQ9Y9U385) + 1)), '}'), '')))), '[a-z]', '')) AS ?step196) . BIND((STRLEN(SUBSTR(?targetMotifMatchCigarQ9Y9U3MF_0035186, 1, (STRLEN(?targetMotifMatchCigarQ9Y9U3MF_0035186) - STRLEN(REPLACE(?targetMotifMatchCigarQ9Y9U3MF_0035186, CONCAT('^(?:[a-z]*(?:[A-Z]|-)){', STR(?step196), '}'), ''))))) - STRLEN(REPLACE(SUBSTR(?targetMotifMatchCigarQ9Y9U3MF_0035186, 1, (STRLEN(?targetMotifMatchCigarQ9Y9U3MF_0035186) - STRLEN(REPLACE(?targetMotifMatchCigarQ9Y9U3MF_0035186, CONCAT('^(?:[a-z]*(?:[A-Z]|-)){', STR(?step196), '}'), '')))), '[^-]', ''))) AS ?step297) . BIND(((?step297 + ?targetMotifMatchRegionMatchBeginPositionMF_0035187) - 1) AS ?thisPositionOn31) . BIND(STRLEN(REPLACE(SUBSTR(?templateMotifCigarQ9Y9U3MF_0035184, 1, (STRLEN(?templateMotifCigarQ9Y9U3MF_0035184) - STRLEN(REPLACE(?templateMotifCigarQ9Y9U3MF_0035184, CONCAT('^(?:-*[^-]){', STR(((157 - ?templateMotifSequenceMatchBeginPositionQ9Y9U385) + 1)), '}'), '')))), '[a-z]', '')) AS ?step198) . BIND((STRLEN(SUBSTR(?targetMotifMatchCigarQ9Y9U3MF_0035186, 1, (STRLEN(?targetMotifMatchCigarQ9Y9U3MF_0035186) - STRLEN(REPLACE(?targetMotifMatchCigarQ9Y9U3MF_0035186, CONCAT('^(?:[a-z]*(?:[A-Z]|-)){', STR(?step198), '}'), ''))))) - STRLEN(REPLACE(SUBSTR(?targetMotifMatchCigarQ9Y9U3MF_0035186, 1, (STRLEN(?targetMotifMatchCigarQ9Y9U3MF_0035186) - STRLEN(REPLACE(?targetMotifMatchCigarQ9Y9U3MF_0035186, CONCAT('^(?:[a-z]*(?:[A-Z]|-)){', STR(?step198), '}'), '')))), '[^-]', ''))) AS ?step299) . BIND(((?step299 + ?targetMotifMatchRegionMatchBeginPositionMF_0035187) - 1) AS ?thisPositionOn32) . BIND(?this AS ?pfs1t100) . BIND(URI(CONCAT(STR(?thisSequence), '#position', STR(?thisPositionOn31))) AS ?pfsb28) . BIND(URI(CONCAT(STR(?thisSequence), '#position', STR(?thisPositionOn32))) AS ?pfse29) . FILTER (REGEX('D[IVL][SA][QT]', SUBSTR(?thisSequenceValue, ?thisPositionOn31, (?thisPositionOn32 - ?thisPositionOn31)))) . BIND(URI(CONCAT(STR(?this), '#MF_00351a27')) AS ?annotation27) . BIND(?this AS ?pfs26) . } } "xsd:string |
| http://purl.uniprot.org/unirules/MF_00351 | http://www.w3.org/ns/shacl#rule | http://purl.uniprot.org/unirules/MF_00351#construct |