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| Subject | Predicate | Object |
|---|---|---|
| http://purl.uniprot.org/unirules/MF_00367#construct | https://hamap.expasy.org/rdf/vocab#addsTriple | http://purl.uniprot.org/unirules/MF_00367#construct-template-85 |
| http://purl.uniprot.org/unirules/MF_00367#construct | https://hamap.expasy.org/rdf/vocab#addsTriple | http://purl.uniprot.org/unirules/MF_00367#construct-template-4 |
| http://purl.uniprot.org/unirules/MF_00367#construct | https://hamap.expasy.org/rdf/vocab#addsTriple | http://purl.uniprot.org/unirules/MF_00367#construct-template-88 |
| http://purl.uniprot.org/unirules/MF_00367#construct | https://hamap.expasy.org/rdf/vocab#addsTriple | http://purl.uniprot.org/unirules/MF_00367#construct-template-2 |
| http://purl.uniprot.org/unirules/MF_00367#construct | https://hamap.expasy.org/rdf/vocab#addsTriple | http://purl.uniprot.org/unirules/MF_00367#construct-template-13 |
| http://purl.uniprot.org/unirules/MF_00367#construct | https://hamap.expasy.org/rdf/vocab#addsTriple | http://purl.uniprot.org/unirules/MF_00367#construct-template-81 |
| http://purl.uniprot.org/unirules/MF_00367#construct | https://hamap.expasy.org/rdf/vocab#addsTriple | http://purl.uniprot.org/unirules/MF_00367#construct-template-106 |
| http://purl.uniprot.org/unirules/MF_00367#construct | https://hamap.expasy.org/rdf/vocab#addsTriple | http://purl.uniprot.org/unirules/MF_00367#construct-template-83 |
| http://purl.uniprot.org/unirules/MF_00367#construct | https://hamap.expasy.org/rdf/vocab#addsTriple | http://purl.uniprot.org/unirules/MF_00367#construct-template-102 |
| http://purl.uniprot.org/unirules/MF_00367#construct | https://hamap.expasy.org/rdf/vocab#addsTriple | http://purl.uniprot.org/unirules/MF_00367#construct-template-101 |
| http://purl.uniprot.org/unirules/MF_00367#construct | http://www.w3.org/ns/shacl#prefixes | http://purl.uniprot.org/unirules/ |
| http://purl.uniprot.org/unirules/MF_00367#construct | http://spinrdf.org/sp#where | http://purl.uniprot.org/unirules/MF_00367#construct-where-list-0 |
| http://purl.uniprot.org/unirules/MF_00367#construct | http://spinrdf.org/sp#templates | http://purl.uniprot.org/unirules/MF_00367#construct-template-list-0 |
| http://purl.uniprot.org/unirules/MF_00367#construct | http://www.w3.org/ns/shacl#construct | "CONSTRUCT {
_:146478 up:source unirule:MF_00367 .
_:146479 up:source unirule:MF_00367 .
_:146480 up:source unirule:MF_00367 .
_:146481 up:source unirule:MF_00367 .
_:146482 up:source unirule:MF_00367 .
_:146483 up:source unirule:MF_00367 .
_:146484 up:source unirule:MF_00367 .
_:146485 up:source unirule:MF_00367 .
_:146486 up:source unirule:MF_00367 .
_:146487 up:source unirule:MF_00367 .
_:146488 up:source unirule:MF_00367 .
_:146489 up:source unirule:MF_00367 .
_:146490 up:source unirule:MF_00367 .
_:146491 up:source unirule:MF_00367 .
_:146492 up:source unirule:MF_00367 .
_:146493 up:source unirule:MF_00367 .
_:146494 up:source unirule:MF_00367 .
_:146495 up:source unirule:MF_00367 .
_:146496 up:source unirule:MF_00367 .
_:146497 up:source unirule:MF_00367 .
_:146498 up:source unirule:MF_00367 .
_:146499 up:source unirule:MF_00367 .
_:146500 up:source unirule:MF_00367 .
_:146501 up:source unirule:MF_00367 .
?this up:annotation ?annotation2 ,
?annotation3 ;
up:classifiedWith GO:0003924 ,
GO:0005525 ,
keyword:342 ,
keyword:547 ,
keyword:694 ;
up:recommendedName ?name0 .
?name0 up:fullName 'GTPase Era' ;
rdf:type up:Structured_Name .
?gene1 skos:prefLabel 'era' .
?annotation2 a up:Subunit_Annotation ;
rdfs:comment 'Monomer.' .
?annotation3 a up:Similarity_Annotation ;
rdfs:comment 'Belongs to the TRAFAC class TrmE-Era-EngA-EngB-Septin-like GTPase superfamily. Era GTPase family.' .
?case4 up:classifiedWith keyword:134 ,
keyword:964 .
?case5 up:classifiedWith GO:0005737 ,
GO:0005886 ,
GO:0042274 ,
GO:0070181 ,
keyword:1003 ,
keyword:472 ,
keyword:690 ,
keyword:699 ,
keyword:963 .
?case6 up:classifiedWith keyword:997 .
?pfs8 up:annotation ?annotation9 .
?annotation9 faldo:begin ?pfsb10 ;
faldo:end ?pfse11 ;
up:ligand ?ligand12 ;
rdf:type up:Binding_Site_Annotation .
?pfsb10 faldo:position ?thisPositionOn13 ;
rdf:type faldo:ExactPosition .
?pfse11 faldo:position ?thisPositionOn14 ;
rdf:type faldo:ExactPosition .
?ligand12 rdfs:subClassOf chebi:37565 .
?pfs15 up:annotation ?annotation16 .
?annotation16 faldo:begin ?pfsb17 ;
faldo:end ?pfse18 ;
up:ligand ?ligand19 ;
rdf:type up:Binding_Site_Annotation .
?pfsb17 faldo:position ?thisPositionOn20 ;
rdf:type faldo:ExactPosition .
?pfse18 faldo:position ?thisPositionOn21 ;
rdf:type faldo:ExactPosition .
?ligand19 rdfs:subClassOf chebi:37565 .
?pfs22 up:annotation ?annotation23 .
?annotation23 faldo:begin ?pfsb24 ;
faldo:end ?pfse25 ;
up:ligand ?ligand26 ;
rdf:type up:Binding_Site_Annotation .
?pfsb24 faldo:position ?thisPositionOn27 ;
rdf:type faldo:ExactPosition .
?pfse25 faldo:position ?thisPositionOn28 ;
rdf:type faldo:ExactPosition .
?ligand26 rdfs:subClassOf chebi:37565 .
_:146502 a rdf:Statement ;
up:attribution _:146478 ;
rdf:subject ?this ;
rdf:predicate up:recommendedName ;
rdf:object ?name0 .
_:146503 a rdf:Statement ;
up:attribution _:146479 ;
rdf:subject ?gene1 ;
rdf:predicate up:encodedBy ;
rdf:object ?gene1 .
_:146504 a rdf:Statement ;
up:attribution _:146480 ;
rdf:subject ?this ;
rdf:predicate up:annotation ;
rdf:object ?annotation2 .
_:146505 a rdf:Statement ;
up:attribution _:146481 ;
rdf:subject ?this ;
rdf:predicate up:annotation ;
rdf:object ?annotation3 .
_:146506 a rdf:Statement ;
up:attribution _:146482 ;
rdf:subject ?this ;
rdf:predicate up:classifiedWith ;
rdf:object keyword:342 .
_:146507 a rdf:Statement ;
up:attribution _:146483 ;
rdf:subject ?this ;
rdf:predicate up:classifiedWith ;
rdf:object keyword:547 .
_:146508 a rdf:Statement ;
up:attribution _:146484 ;
rdf:subject ?this ;
rdf:predicate up:classifiedWith ;
rdf:object keyword:694 .
_:146509 a rdf:Statement ;
up:attribution _:146485 ;
rdf:subject ?this ;
rdf:predicate up:classifiedWith ;
rdf:object GO:0005525 .
_:146510 a rdf:Statement ;
up:attribution _:146486 ;
rdf:subject ?this ;
rdf:predicate up:classifiedWith ;
rdf:object GO:0003924 .
_:146511 a rdf:Statement ;
up:attribution _:146487 ;
rdf:subject ?case4 ;
rdf:predicate up:classifiedWith ;
rdf:object keyword:134 .
_:146512 a rdf:Statement ;
up:attribution _:146488 ;
rdf:subject ?case4 ;
rdf:predicate up:classifiedWith ;
rdf:object keyword:964 .
_:146513 a rdf:Statement ;
up:attribution _:146489 ;
rdf:subject ?case5 ;
rdf:predicate up:classifiedWith ;
rdf:object keyword:1003 .
_:146514 a rdf:Statement ;
up:attribution _:146490 ;
rdf:subject ?case5 ;
rdf:predicate up:classifiedWith ;
rdf:object keyword:963 .
_:146515 a rdf:Statement ;
up:attribution _:146491 ;
rdf:subject ?case5 ;
rdf:predicate up:classifiedWith ;
rdf:object keyword:472 .
_:146516 a rdf:Statement ;
up:attribution _:146492 ;
rdf:subject ?case5 ;
rdf:predicate up:classifiedWith ;
rdf:object keyword:690 .
_:146517 a rdf:Statement ;
up:attribution _:146493 ;
rdf:subject ?case5 ;
rdf:predicate up:classifiedWith ;
rdf:object keyword:699 .
_:146518 a rdf:Statement ;
up:attribution _:146494 ;
rdf:subject ?case5 ;
rdf:predicate up:classifiedWith ;
rdf:object GO:0070181 .
_:146519 a rdf:Statement ;
up:attribution _:146495 ;
rdf:subject ?case5 ;
rdf:predicate up:classifiedWith ;
rdf:object GO:0042274 .
_:146520 a rdf:Statement ;
up:attribution _:146496 ;
rdf:subject ?case5 ;
rdf:predicate up:classifiedWith ;
rdf:object GO:0005737 .
_:146521 a rdf:Statement ;
up:attribution _:146497 ;
rdf:subject ?case5 ;
rdf:predicate up:classifiedWith ;
rdf:object GO:0005886 .
_:146522 a rdf:Statement ;
up:attribution _:146498 ;
rdf:subject ?case6 ;
rdf:predicate up:classifiedWith ;
rdf:object keyword:997 .
_:146523 a rdf:Statement ;
up:source unirule:MF_00367 ;
rdf:subject ?pfs8 ;
rdf:predicate up:annotation ;
rdf:object ?annotation9 .
_:146524 a rdf:Statement ;
up:attribution _:146499 ;
rdf:subject ?pfs8 ;
rdf:predicate up:annotation ;
rdf:object ?annotation9 .
_:146525 a rdf:Statement ;
up:source unirule:MF_00367 ;
rdf:subject ?pfs15 ;
rdf:predicate up:annotation ;
rdf:object ?annotation16 .
_:146526 a rdf:Statement ;
up:attribution _:146500 ;
rdf:subject ?pfs15 ;
rdf:predicate up:annotation ;
rdf:object ?annotation16 .
_:146527 a rdf:Statement ;
up:source unirule:MF_00367 ;
rdf:subject ?pfs22 ;
rdf:predicate up:annotation ;
rdf:object ?annotation23 .
_:146528 a rdf:Statement ;
up:attribution _:146501 ;
rdf:subject ?pfs22 ;
rdf:predicate up:annotation ;
rdf:object ?annotation23 .
}
WHERE {
#baseURI: http://purl.uniprot.org/unirule/MF_00367
#Rule MF_00367 Created by:? on:2005-02-28 Modified by:Edouard de Castro on:2023-06-01
?this up:organism ?thisOrganism ;
rdfs:seeAlso signature:MF_00367 .
?thisOrganism rdfs:subClassOf+ taxon:2 .
BIND(URI(CONCAT(STR(?this), '#MF_00367a0')) AS ?name0) .
BIND(URI(CONCAT(STR(?this), '#MF_00367a2')) AS ?annotation2) .
BIND(URI(CONCAT(STR(?this), '#MF_00367a3')) AS ?annotation3) .
OPTIONAL {
?this up:sequence ?thisSequence .
?thisSequence rdf:value ?thisSequenceValue .
?templateMotifMatch33 faldo:location ?templateMotifSequenceMatchRegionP0661634 ;
edam:is_output_of ?templateMotifSequenceProfileAlignmentOperationP0661636 ;
rdf:type edam:data_0869 ;
rdf:value ?templateMotifCigarP06616MF_0036729 .
?templateMotifSequenceMatchRegionP0661634 faldo:begin ?templateMotifSequenceMatchBeginP0661635 .
?templateMotifSequenceMatchBeginP0661635 faldo:position ?templateMotifSequenceMatchBeginPositionP0661630 ;
faldo:reference isoform:P06616-1 .
?templateMotifSequenceProfileAlignmentOperationP0661636 edam:has_input signature:MF_00367 ;
rdf:type edam:operation_0300 .
?targetMotifMatch37 faldo:location ?targetMotifMatchRegionMatch38 ;
edam:is_output_of ?targetMotifSequenceAlignmentOperationMF_0036740 ;
rdf:type edam:data_0869 ;
rdf:value ?targetMotifMatchCigarP06616MF_0036731 .
?targetMotifMatchRegionMatch38 faldo:begin ?targetMotifMatchRegionMatchBeginMF_0036739 .
?targetMotifMatchRegionMatchBeginMF_0036739 faldo:position ?targetMotifMatchRegionMatchBeginPositionMF_0036732 ;
faldo:reference ?thisSequence .
?targetMotifSequenceAlignmentOperationMF_0036740 edam:has_input signature:MF_00367 ;
rdf:type edam:operation_0300 .
BIND(STRLEN(REPLACE(SUBSTR(?templateMotifCigarP06616MF_0036729, 1, (STRLEN(?templateMotifCigarP06616MF_0036729) - STRLEN(REPLACE(?templateMotifCigarP06616MF_0036729, CONCAT('^(?:-*[^-]){', STR(((15 - ?templateMotifSequenceMatchBeginPositionP0661630) + 1)), '}'), '')))), '[a-z]', '')) AS ?step141) .
BIND((STRLEN(SUBSTR(?targetMotifMatchCigarP06616MF_0036731, 1, (STRLEN(?targetMotifMatchCigarP06616MF_0036731) - STRLEN(REPLACE(?targetMotifMatchCigarP06616MF_0036731, CONCAT('^(?:[a-z]*(?:[A-Z]|-)){', STR(?step141), '}'), ''))))) - STRLEN(REPLACE(SUBSTR(?targetMotifMatchCigarP06616MF_0036731, 1, (STRLEN(?targetMotifMatchCigarP06616MF_0036731) - STRLEN(REPLACE(?targetMotifMatchCigarP06616MF_0036731, CONCAT('^(?:[a-z]*(?:[A-Z]|-)){', STR(?step141), '}'), '')))), '[^-]', ''))) AS ?step242) .
BIND(((?step242 + ?targetMotifMatchRegionMatchBeginPositionMF_0036732) - 1) AS ?thisPositionOn13) .
BIND(STRLEN(REPLACE(SUBSTR(?templateMotifCigarP06616MF_0036729, 1, (STRLEN(?templateMotifCigarP06616MF_0036729) - STRLEN(REPLACE(?templateMotifCigarP06616MF_0036729, CONCAT('^(?:-*[^-]){', STR(((22 - ?templateMotifSequenceMatchBeginPositionP0661630) + 1)), '}'), '')))), '[a-z]', '')) AS ?step143) .
BIND((STRLEN(SUBSTR(?targetMotifMatchCigarP06616MF_0036731, 1, (STRLEN(?targetMotifMatchCigarP06616MF_0036731) - STRLEN(REPLACE(?targetMotifMatchCigarP06616MF_0036731, CONCAT('^(?:[a-z]*(?:[A-Z]|-)){', STR(?step143), '}'), ''))))) - STRLEN(REPLACE(SUBSTR(?targetMotifMatchCigarP06616MF_0036731, 1, (STRLEN(?targetMotifMatchCigarP06616MF_0036731) - STRLEN(REPLACE(?targetMotifMatchCigarP06616MF_0036731, CONCAT('^(?:[a-z]*(?:[A-Z]|-)){', STR(?step143), '}'), '')))), '[^-]', ''))) AS ?step244) .
BIND(((?step244 + ?targetMotifMatchRegionMatchBeginPositionMF_0036732) - 1) AS ?thisPositionOn14) .
BIND(?this AS ?pfs1t45) .
BIND(URI(CONCAT(STR(?thisSequence), '#position', STR(?thisPositionOn13))) AS ?pfsb10) .
BIND(URI(CONCAT(STR(?thisSequence), '#position', STR(?thisPositionOn14))) AS ?pfse11) .
FILTER (REGEX('G[ARNDCQEGHILKMFPSTWYVBZJUOX][PTA][ARNDCQEGHILKMFPSTWYVBZJUOX][ARNDCQEGHILKMFPSTWYVBZJUOX]GKS', SUBSTR(?thisSequenceValue, ?thisPositionOn13, (?thisPositionOn14 - ?thisPositionOn13)))) .
BIND(URI(CONCAT(STR(?this), '#MF_00367a9')) AS ?annotation9) .
BIND(?this AS ?pfs8) .
}
OPTIONAL {
?this up:sequence ?thisSequence .
?thisSequence rdf:value ?thisSequenceValue .
?templateMotifMatch50 faldo:location ?templateMotifSequenceMatchRegionP0661651 ;
edam:is_output_of ?templateMotifSequenceProfileAlignmentOperationP0661653 ;
rdf:type edam:data_0869 ;
rdf:value ?templateMotifCigarP06616MF_0036746 .
?templateMotifSequenceMatchRegionP0661651 faldo:begin ?templateMotifSequenceMatchBeginP0661652 .
?templateMotifSequenceMatchBeginP0661652 faldo:position ?templateMotifSequenceMatchBeginPositionP0661647 ;
faldo:reference isoform:P06616-1 .
?templateMotifSequenceProfileAlignmentOperationP0661653 edam:has_input signature:MF_00367 ;
rdf:type edam:operation_0300 .
?targetMotifMatch54 faldo:location ?targetMotifMatchRegionMatch55 ;
edam:is_output_of ?targetMotifSequenceAlignmentOperationMF_0036757 ;
rdf:type edam:data_0869 ;
rdf:value ?targetMotifMatchCigarP06616MF_0036748 .
?targetMotifMatchRegionMatch55 faldo:begin ?targetMotifMatchRegionMatchBeginMF_0036756 .
?targetMotifMatchRegionMatchBeginMF_0036756 faldo:position ?targetMotifMatchRegionMatchBeginPositionMF_0036749 ;
faldo:reference ?thisSequence .
?targetMotifSequenceAlignmentOperationMF_0036757 edam:has_input signature:MF_00367 ;
rdf:type edam:operation_0300 .
BIND(STRLEN(REPLACE(SUBSTR(?templateMotifCigarP06616MF_0036746, 1, (STRLEN(?templateMotifCigarP06616MF_0036746) - STRLEN(REPLACE(?templateMotifCigarP06616MF_0036746, CONCAT('^(?:-*[^-]){', STR(((62 - ?templateMotifSequenceMatchBeginPositionP0661647) + 1)), '}'), '')))), '[a-z]', '')) AS ?step158) .
BIND((STRLEN(SUBSTR(?targetMotifMatchCigarP06616MF_0036748, 1, (STRLEN(?targetMotifMatchCigarP06616MF_0036748) - STRLEN(REPLACE(?targetMotifMatchCigarP06616MF_0036748, CONCAT('^(?:[a-z]*(?:[A-Z]|-)){', STR(?step158), '}'), ''))))) - STRLEN(REPLACE(SUBSTR(?targetMotifMatchCigarP06616MF_0036748, 1, (STRLEN(?targetMotifMatchCigarP06616MF_0036748) - STRLEN(REPLACE(?targetMotifMatchCigarP06616MF_0036748, CONCAT('^(?:[a-z]*(?:[A-Z]|-)){', STR(?step158), '}'), '')))), '[^-]', ''))) AS ?step259) .
BIND(((?step259 + ?targetMotifMatchRegionMatchBeginPositionMF_0036749) - 1) AS ?thisPositionOn20) .
BIND(STRLEN(REPLACE(SUBSTR(?templateMotifCigarP06616MF_0036746, 1, (STRLEN(?templateMotifCigarP06616MF_0036746) - STRLEN(REPLACE(?templateMotifCigarP06616MF_0036746, CONCAT('^(?:-*[^-]){', STR(((66 - ?templateMotifSequenceMatchBeginPositionP0661647) + 1)), '}'), '')))), '[a-z]', '')) AS ?step160) .
BIND((STRLEN(SUBSTR(?targetMotifMatchCigarP06616MF_0036748, 1, (STRLEN(?targetMotifMatchCigarP06616MF_0036748) - STRLEN(REPLACE(?targetMotifMatchCigarP06616MF_0036748, CONCAT('^(?:[a-z]*(?:[A-Z]|-)){', STR(?step160), '}'), ''))))) - STRLEN(REPLACE(SUBSTR(?targetMotifMatchCigarP06616MF_0036748, 1, (STRLEN(?targetMotifMatchCigarP06616MF_0036748) - STRLEN(REPLACE(?targetMotifMatchCigarP06616MF_0036748, CONCAT('^(?:[a-z]*(?:[A-Z]|-)){', STR(?step160), '}'), '')))), '[^-]', ''))) AS ?step261) .
BIND(((?step261 + ?targetMotifMatchRegionMatchBeginPositionMF_0036749) - 1) AS ?thisPositionOn21) .
BIND(?this AS ?pfs1t62) .
BIND(URI(CONCAT(STR(?thisSequence), '#position', STR(?thisPositionOn20))) AS ?pfsb17) .
BIND(URI(CONCAT(STR(?thisSequence), '#position', STR(?thisPositionOn21))) AS ?pfse18) .
FILTER (REGEX('D[TV]PG[ARNDCQEGHILKMFPSTWYVBZJUOX]', SUBSTR(?thisSequenceValue, ?thisPositionOn20, (?thisPositionOn21 - ?thisPositionOn20)))) .
BIND(URI(CONCAT(STR(?this), '#MF_00367a16')) AS ?annotation16) .
BIND(?this AS ?pfs15) .
}
OPTIONAL {
?this up:sequence ?thisSequence .
?thisSequence rdf:value ?thisSequenceValue .
?templateMotifMatch67 faldo:location ?templateMotifSequenceMatchRegionP0661668 ;
edam:is_output_of ?templateMotifSequenceProfileAlignmentOperationP0661670 ;
rdf:type edam:data_0869 ;
rdf:value ?templateMotifCigarP06616MF_0036763 .
?templateMotifSequenceMatchRegionP0661668 faldo:begin ?templateMotifSequenceMatchBeginP0661669 .
?templateMotifSequenceMatchBeginP0661669 faldo:position ?templateMotifSequenceMatchBeginPositionP0661664 ;
faldo:reference isoform:P06616-1 .
?templateMotifSequenceProfileAlignmentOperationP0661670 edam:has_input signature:MF_00367 ;
rdf:type edam:operation_0300 .
?targetMotifMatch71 faldo:location ?targetMotifMatchRegionMatch72 ;
edam:is_output_of ?targetMotifSequenceAlignmentOperationMF_0036774 ;
rdf:type edam:data_0869 ;
rdf:value ?targetMotifMatchCigarP06616MF_0036765 .
?targetMotifMatchRegionMatch72 faldo:begin ?targetMotifMatchRegionMatchBeginMF_0036773 .
?targetMotifMatchRegionMatchBeginMF_0036773 faldo:position ?targetMotifMatchRegionMatchBeginPositionMF_0036766 ;
faldo:reference ?thisSequence .
?targetMotifSequenceAlignmentOperationMF_0036774 edam:has_input signature:MF_00367 ;
rdf:type edam:operation_0300 .
BIND(STRLEN(REPLACE(SUBSTR(?templateMotifCigarP06616MF_0036763, 1, (STRLEN(?templateMotifCigarP06616MF_0036763) - STRLEN(REPLACE(?templateMotifCigarP06616MF_0036763, CONCAT('^(?:-*[^-]){', STR(((124 - ?templateMotifSequenceMatchBeginPositionP0661664) + 1)), '}'), '')))), '[a-z]', '')) AS ?step175) .
BIND((STRLEN(SUBSTR(?targetMotifMatchCigarP06616MF_0036765, 1, (STRLEN(?targetMotifMatchCigarP06616MF_0036765) - STRLEN(REPLACE(?targetMotifMatchCigarP06616MF_0036765, CONCAT('^(?:[a-z]*(?:[A-Z]|-)){', STR(?step175), '}'), ''))))) - STRLEN(REPLACE(SUBSTR(?targetMotifMatchCigarP06616MF_0036765, 1, (STRLEN(?targetMotifMatchCigarP06616MF_0036765) - STRLEN(REPLACE(?targetMotifMatchCigarP06616MF_0036765, CONCAT('^(?:[a-z]*(?:[A-Z]|-)){', STR(?step175), '}'), '')))), '[^-]', ''))) AS ?step276) .
BIND(((?step276 + ?targetMotifMatchRegionMatchBeginPositionMF_0036766) - 1) AS ?thisPositionOn27) .
BIND(STRLEN(REPLACE(SUBSTR(?templateMotifCigarP06616MF_0036763, 1, (STRLEN(?templateMotifCigarP06616MF_0036763) - STRLEN(REPLACE(?templateMotifCigarP06616MF_0036763, CONCAT('^(?:-*[^-]){', STR(((127 - ?templateMotifSequenceMatchBeginPositionP0661664) + 1)), '}'), '')))), '[a-z]', '')) AS ?step177) .
BIND((STRLEN(SUBSTR(?targetMotifMatchCigarP06616MF_0036765, 1, (STRLEN(?targetMotifMatchCigarP06616MF_0036765) - STRLEN(REPLACE(?targetMotifMatchCigarP06616MF_0036765, CONCAT('^(?:[a-z]*(?:[A-Z]|-)){', STR(?step177), '}'), ''))))) - STRLEN(REPLACE(SUBSTR(?targetMotifMatchCigarP06616MF_0036765, 1, (STRLEN(?targetMotifMatchCigarP06616MF_0036765) - STRLEN(REPLACE(?targetMotifMatchCigarP06616MF_0036765, CONCAT('^(?:[a-z]*(?:[A-Z]|-)){', STR(?step177), '}'), '')))), '[^-]', ''))) AS ?step278) .
BIND(((?step278 + ?targetMotifMatchRegionMatchBeginPositionMF_0036766) - 1) AS ?thisPositionOn28) .
BIND(?this AS ?pfs1t79) .
BIND(URI(CONCAT(STR(?thisSequence), '#position', STR(?thisPositionOn27))) AS ?pfsb24) .
BIND(URI(CONCAT(STR(?thisSequence), '#position', STR(?thisPositionOn28))) AS ?pfse25) .
FILTER (REGEX('[ARNDCQEGHILKMFPSTWYVBZJUOX]K[ARNDCQEGHILKMFPSTWYVBZJUOX][ARNDCQEGHILKMFPSTWYVBZJUOX]', SUBSTR(?thisSequenceValue, ?thisPositionOn27, (?thisPositionOn28 - ?thisPositionOn27)))) .
BIND(URI(CONCAT(STR(?this), '#MF_00367a23')) AS ?annotation23) .
BIND(?this AS ?pfs22) .
}
OPTIONAL {
?this a up:Protein .
?this up:organism ?thisOrganism .
?thisOrganism rdfs:subClassOf+ taxon:1762 .
BIND(?this AS ?case4) .
}
OPTIONAL {
?this a up:Protein .
?this up:organism ?thisOrganism .
FILTER (! (EXISTS {
?thisOrganism rdfs:subClassOf+ taxon:1762 .
})) .
BIND(?this AS ?case5) .
}
OPTIONAL {
?this a up:Protein .
?this up:organism ?thisOrganism .
{
?this up:proteome |
| http://purl.uniprot.org/unirules/MF_00367 | http://www.w3.org/ns/shacl#rule | http://purl.uniprot.org/unirules/MF_00367#construct |