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| Subject | Predicate | Object |
|---|---|---|
| http://purl.uniprot.org/unirules/MF_00371#construct | https://hamap.expasy.org/rdf/vocab#addsTriple | http://purl.uniprot.org/unirules/MF_00371#construct-template-56 |
| http://purl.uniprot.org/unirules/MF_00371#construct | https://hamap.expasy.org/rdf/vocab#addsTriple | http://purl.uniprot.org/unirules/MF_00371#construct-template-100 |
| http://purl.uniprot.org/unirules/MF_00371#construct | https://hamap.expasy.org/rdf/vocab#addsTriple | http://purl.uniprot.org/unirules/MF_00371#construct-template-55 |
| http://purl.uniprot.org/unirules/MF_00371#construct | https://hamap.expasy.org/rdf/vocab#addsTriple | http://purl.uniprot.org/unirules/MF_00371#construct-template-79 |
| http://purl.uniprot.org/unirules/MF_00371#construct | https://hamap.expasy.org/rdf/vocab#addsTriple | http://purl.uniprot.org/unirules/MF_00371#construct-template-59 |
| http://purl.uniprot.org/unirules/MF_00371#construct | http://www.w3.org/ns/shacl#prefixes | http://purl.uniprot.org/unirules/ |
| http://purl.uniprot.org/unirules/MF_00371#construct | http://spinrdf.org/sp#where | http://purl.uniprot.org/unirules/MF_00371#construct-where-list-0 |
| http://purl.uniprot.org/unirules/MF_00371#construct | http://spinrdf.org/sp#templates | http://purl.uniprot.org/unirules/MF_00371#construct-template-list-0 |
| http://purl.uniprot.org/unirules/MF_00371#construct | http://www.w3.org/ns/shacl#construct | "CONSTRUCT { _:147442 up:source unirule:MF_00371 . _:147443 up:source unirule:MF_00371 . _:147444 up:source unirule:MF_00371 . _:147445 up:source unirule:MF_00371 . _:147446 up:source unirule:MF_00371 . _:147447 up:source unirule:MF_00371 . _:147448 up:source unirule:MF_00371 . _:147449 up:source unirule:MF_00371 . _:147450 up:source unirule:MF_00371 . _:147451 up:source unirule:MF_00371 . _:147452 up:source unirule:MF_00371 . _:147453 up:source unirule:MF_00371 . _:147454 up:source unirule:MF_00371 . _:147455 up:source unirule:MF_00371 . _:147456 up:source unirule:MF_00371 . _:147457 up:source unirule:MF_00371 . ?this up:annotation ?annotation2 , ?annotation3 ; up:classifiedWith GO:0006412 , GO:0008270 , keyword:687 , keyword:689 ; up:recommendedName ?name0 . ?name0 up:fullName 'Small ribosomal subunit protein eS27' ; rdf:type up:Structured_Name . ?gene1 skos:prefLabel 'rps27e' . ?annotation2 a up:Subunit_Annotation ; rdfs:comment 'Part of the 30S ribosomal subunit.' . ?annotation3 a up:Similarity_Annotation ; rdfs:comment 'Belongs to the eukaryotic ribosomal protein eS27 family.' . ?case4 up:classifiedWith keyword:479 , keyword:862 , keyword:863 . ?pfs5 up:annotation ?annotation6 , ?annotation12 , ?annotation18 , ?annotation24 . ?annotation6 faldo:begin ?pfsb7 ; faldo:end ?pfse8 ; up:ligand ?ligand9 ; rdf:type up:Binding_Site_Annotation . ?pfsb7 faldo:position ?thisPositionOn10 ; rdf:type faldo:ExactPosition . ?pfse8 faldo:position ?thisPositionOn11 ; rdf:type faldo:ExactPosition . ?ligand9 rdfs:subClassOf chebi:29105 . ?annotation12 faldo:begin ?pfsb13 ; faldo:end ?pfse14 ; up:ligand ?ligand15 ; rdf:type up:Binding_Site_Annotation . ?pfsb13 faldo:position ?thisPositionOn16 ; rdf:type faldo:ExactPosition . ?pfse14 faldo:position ?thisPositionOn17 ; rdf:type faldo:ExactPosition . ?ligand15 rdfs:subClassOf chebi:29105 . ?annotation18 faldo:begin ?pfsb19 ; faldo:end ?pfse20 ; up:ligand ?ligand21 ; rdf:type up:Binding_Site_Annotation . ?pfsb19 faldo:position ?thisPositionOn22 ; rdf:type faldo:ExactPosition . ?pfse20 faldo:position ?thisPositionOn23 ; rdf:type faldo:ExactPosition . ?ligand21 rdfs:subClassOf chebi:29105 . ?annotation24 faldo:begin ?pfsb25 ; faldo:end ?pfse26 ; up:ligand ?ligand27 ; rdf:type up:Binding_Site_Annotation . ?pfsb25 faldo:position ?thisPositionOn28 ; rdf:type faldo:ExactPosition . ?pfse26 faldo:position ?thisPositionOn29 ; rdf:type faldo:ExactPosition . ?ligand27 rdfs:subClassOf chebi:29105 . ?pfs30 up:annotation ?annotation31 . ?annotation31 faldo:begin ?pfsb32 ; faldo:end ?pfse33 ; rdf:type up:Zinc_Finger_Annotation ; rdfs:comment 'C4-type' . ?pfsb32 faldo:position ?thisPositionOn34 ; rdf:type faldo:ExactPosition . ?pfse33 faldo:position ?thisPositionOn35 ; rdf:type faldo:ExactPosition . _:147458 a rdf:Statement ; up:attribution _:147442 ; rdf:subject ?this ; rdf:predicate up:recommendedName ; rdf:object ?name0 . _:147459 a rdf:Statement ; up:attribution _:147443 ; rdf:subject ?gene1 ; rdf:predicate up:encodedBy ; rdf:object ?gene1 . _:147460 a rdf:Statement ; up:attribution _:147444 ; rdf:subject ?this ; rdf:predicate up:annotation ; rdf:object ?annotation2 . _:147461 a rdf:Statement ; up:attribution _:147445 ; rdf:subject ?this ; rdf:predicate up:annotation ; rdf:object ?annotation3 . _:147462 a rdf:Statement ; up:attribution _:147446 ; rdf:subject ?this ; rdf:predicate up:classifiedWith ; rdf:object keyword:687 . _:147463 a rdf:Statement ; up:attribution _:147447 ; rdf:subject ?this ; rdf:predicate up:classifiedWith ; rdf:object keyword:689 . _:147464 a rdf:Statement ; up:attribution _:147448 ; rdf:subject ?this ; rdf:predicate up:classifiedWith ; rdf:object GO:0008270 . _:147465 a rdf:Statement ; up:attribution _:147449 ; rdf:subject ?this ; rdf:predicate up:classifiedWith ; rdf:object GO:0006412 . _:147466 a rdf:Statement ; up:attribution _:147450 ; rdf:subject ?case4 ; rdf:predicate up:classifiedWith ; rdf:object keyword:479 . _:147467 a rdf:Statement ; up:attribution _:147451 ; rdf:subject ?case4 ; rdf:predicate up:classifiedWith ; rdf:object keyword:862 . _:147468 a rdf:Statement ; up:attribution _:147452 ; rdf:subject ?case4 ; rdf:predicate up:classifiedWith ; rdf:object keyword:863 . _:147469 a rdf:Statement ; up:source unirule:MF_00371 ; rdf:subject ?pfs5 ; rdf:predicate up:annotation ; rdf:object ?annotation6 . _:147470 a rdf:Statement ; up:attribution _:147453 ; rdf:subject ?pfs5 ; rdf:predicate up:annotation ; rdf:object ?annotation6 . _:147471 a rdf:Statement ; up:source unirule:MF_00371 ; rdf:subject ?pfs5 ; rdf:predicate up:annotation ; rdf:object ?annotation12 . _:147472 a rdf:Statement ; up:attribution _:147454 ; rdf:subject ?pfs5 ; rdf:predicate up:annotation ; rdf:object ?annotation12 . _:147473 a rdf:Statement ; up:source unirule:MF_00371 ; rdf:subject ?pfs5 ; rdf:predicate up:annotation ; rdf:object ?annotation18 . _:147474 a rdf:Statement ; up:attribution _:147455 ; rdf:subject ?pfs5 ; rdf:predicate up:annotation ; rdf:object ?annotation18 . _:147475 a rdf:Statement ; up:source unirule:MF_00371 ; rdf:subject ?pfs5 ; rdf:predicate up:annotation ; rdf:object ?annotation24 . _:147476 a rdf:Statement ; up:attribution _:147456 ; rdf:subject ?pfs5 ; rdf:predicate up:annotation ; rdf:object ?annotation24 . _:147477 a rdf:Statement ; up:source unirule:MF_00371 ; rdf:subject ?pfs30 ; rdf:predicate up:annotation ; rdf:object ?annotation31 . _:147478 a rdf:Statement ; up:attribution _:147457 ; rdf:subject ?pfs30 ; rdf:predicate up:annotation ; rdf:object ?annotation31 . } WHERE { #baseURI: http://purl.uniprot.org/unirule/MF_00371 #Rule MF_00371 Created by:? on:2005-02-28 Modified by:Andrea Auchincloss on:2024-10-14 ?this up:organism ?thisOrganism ; rdfs:seeAlso signature:MF_00371 . ?thisOrganism rdfs:subClassOf+ taxon:2157 . BIND(URI(CONCAT(STR(?this), '#MF_00371a0')) AS ?name0) . BIND(URI(CONCAT(STR(?this), '#MF_00371a2')) AS ?annotation2) . BIND(URI(CONCAT(STR(?this), '#MF_00371a3')) AS ?annotation3) . OPTIONAL { ?this up:sequence ?thisSequence . ?thisSequence rdf:value ?thisSequenceValue . ?templateMotifMatch40 faldo:location ?templateMotifSequenceMatchRegionQ5JE5041 ; edam:is_output_of ?templateMotifSequenceProfileAlignmentOperationQ5JE5043 ; rdf:type edam:data_0869 ; rdf:value ?templateMotifCigarQ5JE50MF_0037136 . ?templateMotifSequenceMatchRegionQ5JE5041 faldo:begin ?templateMotifSequenceMatchBeginQ5JE5042 . ?templateMotifSequenceMatchBeginQ5JE5042 faldo:position ?templateMotifSequenceMatchBeginPositionQ5JE5037 ; faldo:reference isoform:Q5JE50-1 . ?templateMotifSequenceProfileAlignmentOperationQ5JE5043 edam:has_input signature:MF_00371 ; rdf:type edam:operation_0300 . ?targetMotifMatch44 faldo:location ?targetMotifMatchRegionMatch45 ; edam:is_output_of ?targetMotifSequenceAlignmentOperationMF_0037147 ; rdf:type edam:data_0869 ; rdf:value ?targetMotifMatchCigarQ5JE50MF_0037138 . ?targetMotifMatchRegionMatch45 faldo:begin ?targetMotifMatchRegionMatchBeginMF_0037146 . ?targetMotifMatchRegionMatchBeginMF_0037146 faldo:position ?targetMotifMatchRegionMatchBeginPositionMF_0037139 ; faldo:reference ?thisSequence . ?targetMotifSequenceAlignmentOperationMF_0037147 edam:has_input signature:MF_00371 ; rdf:type edam:operation_0300 . BIND(?this AS ?tagFTGRP_1) . BIND(STRLEN(REPLACE(SUBSTR(?templateMotifCigarQ5JE50MF_0037136, 1, (STRLEN(?templateMotifCigarQ5JE50MF_0037136) - STRLEN(REPLACE(?templateMotifCigarQ5JE50MF_0037136, CONCAT('^(?:-*[^-]){', STR(((20 - ?templateMotifSequenceMatchBeginPositionQ5JE5037) + 1)), '}'), '')))), '[a-z]', '')) AS ?step148) . BIND((STRLEN(SUBSTR(?targetMotifMatchCigarQ5JE50MF_0037138, 1, (STRLEN(?targetMotifMatchCigarQ5JE50MF_0037138) - STRLEN(REPLACE(?targetMotifMatchCigarQ5JE50MF_0037138, CONCAT('^(?:[a-z]*(?:[A-Z]|-)){', STR(?step148), '}'), ''))))) - STRLEN(REPLACE(SUBSTR(?targetMotifMatchCigarQ5JE50MF_0037138, 1, (STRLEN(?targetMotifMatchCigarQ5JE50MF_0037138) - STRLEN(REPLACE(?targetMotifMatchCigarQ5JE50MF_0037138, CONCAT('^(?:[a-z]*(?:[A-Z]|-)){', STR(?step148), '}'), '')))), '[^-]', ''))) AS ?step249) . BIND(((?step249 + ?targetMotifMatchRegionMatchBeginPositionMF_0037139) - 1) AS ?thisPositionOn10) . BIND(?thisPositionOn10 AS ?thisPositionOn11) . BIND(?this AS ?pfs1t50) . BIND(URI(CONCAT(STR(?thisSequence), '#position', STR(?thisPositionOn10))) AS ?pfsb7) . BIND(URI(CONCAT(STR(?thisSequence), '#position', STR(?thisPositionOn11))) AS ?pfse8) . FILTER ((SUBSTR(?thisSequenceValue, ?thisPositionOn10, 1) = 'C')) . BIND(STRLEN(REPLACE(SUBSTR(?templateMotifCigarQ5JE50MF_0037136, 1, (STRLEN(?templateMotifCigarQ5JE50MF_0037136) - STRLEN(REPLACE(?templateMotifCigarQ5JE50MF_0037136, CONCAT('^(?:-*[^-]){', STR(((23 - ?templateMotifSequenceMatchBeginPositionQ5JE5037) + 1)), '}'), '')))), '[a-z]', '')) AS ?step151) . BIND((STRLEN(SUBSTR(?targetMotifMatchCigarQ5JE50MF_0037138, 1, (STRLEN(?targetMotifMatchCigarQ5JE50MF_0037138) - STRLEN(REPLACE(?targetMotifMatchCigarQ5JE50MF_0037138, CONCAT('^(?:[a-z]*(?:[A-Z]|-)){', STR(?step151), '}'), ''))))) - STRLEN(REPLACE(SUBSTR(?targetMotifMatchCigarQ5JE50MF_0037138, 1, (STRLEN(?targetMotifMatchCigarQ5JE50MF_0037138) - STRLEN(REPLACE(?targetMotifMatchCigarQ5JE50MF_0037138, CONCAT('^(?:[a-z]*(?:[A-Z]|-)){', STR(?step151), '}'), '')))), '[^-]', ''))) AS ?step252) . BIND(((?step252 + ?targetMotifMatchRegionMatchBeginPositionMF_0037139) - 1) AS ?thisPositionOn16) . BIND(?thisPositionOn16 AS ?thisPositionOn17) . BIND(?this AS ?pfs1t53) . BIND(URI(CONCAT(STR(?thisSequence), '#position', STR(?thisPositionOn16))) AS ?pfsb13) . BIND(URI(CONCAT(STR(?thisSequence), '#position', STR(?thisPositionOn17))) AS ?pfse14) . FILTER ((SUBSTR(?thisSequenceValue, ?thisPositionOn16, 1) = 'C')) . BIND(STRLEN(REPLACE(SUBSTR(?templateMotifCigarQ5JE50MF_0037136, 1, (STRLEN(?templateMotifCigarQ5JE50MF_0037136) - STRLEN(REPLACE(?templateMotifCigarQ5JE50MF_0037136, CONCAT('^(?:-*[^-]){', STR(((39 - ?templateMotifSequenceMatchBeginPositionQ5JE5037) + 1)), '}'), '')))), '[a-z]', '')) AS ?step154) . BIND((STRLEN(SUBSTR(?targetMotifMatchCigarQ5JE50MF_0037138, 1, (STRLEN(?targetMotifMatchCigarQ5JE50MF_0037138) - STRLEN(REPLACE(?targetMotifMatchCigarQ5JE50MF_0037138, CONCAT('^(?:[a-z]*(?:[A-Z]|-)){', STR(?step154), '}'), ''))))) - STRLEN(REPLACE(SUBSTR(?targetMotifMatchCigarQ5JE50MF_0037138, 1, (STRLEN(?targetMotifMatchCigarQ5JE50MF_0037138) - STRLEN(REPLACE(?targetMotifMatchCigarQ5JE50MF_0037138, CONCAT('^(?:[a-z]*(?:[A-Z]|-)){', STR(?step154), '}'), '')))), '[^-]', ''))) AS ?step255) . BIND(((?step255 + ?targetMotifMatchRegionMatchBeginPositionMF_0037139) - 1) AS ?thisPositionOn22) . BIND(?thisPositionOn22 AS ?thisPositionOn23) . BIND(?this AS ?pfs1t56) . BIND(URI(CONCAT(STR(?thisSequence), '#position', STR(?thisPositionOn22))) AS ?pfsb19) . BIND(URI(CONCAT(STR(?thisSequence), '#position', STR(?thisPositionOn23))) AS ?pfse20) . FILTER ((SUBSTR(?thisSequenceValue, ?thisPositionOn22, 1) = 'C')) . BIND(STRLEN(REPLACE(SUBSTR(?templateMotifCigarQ5JE50MF_0037136, 1, (STRLEN(?templateMotifCigarQ5JE50MF_0037136) - STRLEN(REPLACE(?templateMotifCigarQ5JE50MF_0037136, CONCAT('^(?:-*[^-]){', STR(((42 - ?templateMotifSequenceMatchBeginPositionQ5JE5037) + 1)), '}'), '')))), '[a-z]', '')) AS ?step157) . BIND((STRLEN(SUBSTR(?targetMotifMatchCigarQ5JE50MF_0037138, 1, (STRLEN(?targetMotifMatchCigarQ5JE50MF_0037138) - STRLEN(REPLACE(?targetMotifMatchCigarQ5JE50MF_0037138, CONCAT('^(?:[a-z]*(?:[A-Z]|-)){', STR(?step157), '}'), ''))))) - STRLEN(REPLACE(SUBSTR(?targetMotifMatchCigarQ5JE50MF_0037138, 1, (STRLEN(?targetMotifMatchCigarQ5JE50MF_0037138) - STRLEN(REPLACE(?targetMotifMatchCigarQ5JE50MF_0037138, CONCAT('^(?:[a-z]*(?:[A-Z]|-)){', STR(?step157), '}'), '')))), '[^-]', ''))) AS ?step258) . BIND(((?step258 + ?targetMotifMatchRegionMatchBeginPositionMF_0037139) - 1) AS ?thisPositionOn28) . BIND(?thisPositionOn28 AS ?thisPositionOn29) . BIND(?this AS ?pfs1t59) . BIND(URI(CONCAT(STR(?thisSequence), '#position', STR(?thisPositionOn28))) AS ?pfsb25) . BIND(URI(CONCAT(STR(?thisSequence), '#position', STR(?thisPositionOn29))) AS ?pfse26) . FILTER ((SUBSTR(?thisSequenceValue, ?thisPositionOn28, 1) = 'C')) . BIND(?this AS ?pfs5) . } OPTIONAL { ?this up:sequence ?thisSequence . ?thisSequence rdf:value ?thisSequenceValue . ?templateMotifMatch64 faldo:location ?templateMotifSequenceMatchRegionQ5JE5065 ; edam:is_output_of ?templateMotifSequenceProfileAlignmentOperationQ5JE5067 ; rdf:type edam:data_0869 ; rdf:value ?templateMotifCigarQ5JE50MF_0037160 . ?templateMotifSequenceMatchRegionQ5JE5065 faldo:begin ?templateMotifSequenceMatchBeginQ5JE5066 . ?templateMotifSequenceMatchBeginQ5JE5066 faldo:position ?templateMotifSequenceMatchBeginPositionQ5JE5061 ; faldo:reference isoform:Q5JE50-1 . ?templateMotifSequenceProfileAlignmentOperationQ5JE5067 edam:has_input signature:MF_00371 ; rdf:type edam:operation_0300 . ?targetMotifMatch68 faldo:location ?targetMotifMatchRegionMatch69 ; edam:is_output_of ?targetMotifSequenceAlignmentOperationMF_0037171 ; rdf:type edam:data_0869 ; rdf:value ?targetMotifMatchCigarQ5JE50MF_0037162 . ?targetMotifMatchRegionMatch69 faldo:begin ?targetMotifMatchRegionMatchBeginMF_0037170 . ?targetMotifMatchRegionMatchBeginMF_0037170 faldo:position ?targetMotifMatchRegionMatchBeginPositionMF_0037163 ; faldo:reference ?thisSequence . ?targetMotifSequenceAlignmentOperationMF_0037171 edam:has_input signature:MF_00371 ; rdf:type edam:operation_0300 . BIND(STRLEN(REPLACE(SUBSTR(?templateMotifCigarQ5JE50MF_0037160, 1, (STRLEN(?templateMotifCigarQ5JE50MF_0037160) - STRLEN(REPLACE(?templateMotifCigarQ5JE50MF_0037160, CONCAT('^(?:-*[^-]){', STR(((20 - ?templateMotifSequenceMatchBeginPositionQ5JE5061) + 1)), '}'), '')))), '[a-z]', '')) AS ?step172) . BIND((STRLEN(SUBSTR(?targetMotifMatchCigarQ5JE50MF_0037162, 1, (STRLEN(?targetMotifMatchCigarQ5JE50MF_0037162) - STRLEN(REPLACE(?targetMotifMatchCigarQ5JE50MF_0037162, CONCAT('^(?:[a-z]*(?:[A-Z]|-)){', STR(?step172), '}'), ''))))) - STRLEN(REPLACE(SUBSTR(?targetMotifMatchCigarQ5JE50MF_0037162, 1, (STRLEN(?targetMotifMatchCigarQ5JE50MF_0037162) - STRLEN(REPLACE(?targetMotifMatchCigarQ5JE50MF_0037162, CONCAT('^(?:[a-z]*(?:[A-Z]|-)){', STR(?step172), '}'), '')))), '[^-]', ''))) AS ?step273) . BIND(((?step273 + ?targetMotifMatchRegionMatchBeginPositionMF_0037163) - 1) AS ?thisPositionOn34) . BIND(STRLEN(REPLACE(SUBSTR(?templateMotifCigarQ5JE50MF_0037160, 1, (STRLEN(?templateMotifCigarQ5JE50MF_0037160) - STRLEN(REPLACE(?templateMotifCigarQ5JE50MF_0037160, CONCAT('^(?:-*[^-]){', STR(((42 - ?templateMotifSequenceMatchBeginPositionQ5JE5061) + 1)), '}'), '')))), '[a-z]', '')) AS ?step174) . BIND((STRLEN(SUBSTR(?targetMotifMatchCigarQ5JE50MF_0037162, 1, (STRLEN(?targetMotifMatchCigarQ5JE50MF_0037162) - STRLEN(REPLACE(?targetMotifMatchCigarQ5JE50MF_0037162, CONCAT('^(?:[a-z]*(?:[A-Z]|-)){', STR(?step174), '}'), ''))))) - STRLEN(REPLACE(SUBSTR(?targetMotifMatchCigarQ5JE50MF_0037162, 1, (STRLEN(?targetMotifMatchCigarQ5JE50MF_0037162) - STRLEN(REPLACE(?targetMotifMatchCigarQ5JE50MF_0037162, CONCAT('^(?:[a-z]*(?:[A-Z]|-)){', STR(?step174), '}'), '')))), '[^-]', ''))) AS ?step275) . BIND(((?step275 + ?targetMotifMatchRegionMatchBeginPositionMF_0037163) - 1) AS ?thisPositionOn35) . BIND(?this AS ?pfs2t76) . BIND(URI(CONCAT(STR(?thisSequence), '#position', STR(?thisPositionOn34))) AS ?pfsb32) . BIND(URI(CONCAT(STR(?thisSequence), '#position', STR(?thisPositionOn35))) AS ?pfse33) . FILTER (REGEX('C[ARNDCQEGHILKMFPSTWYVBZJUOX]{2)C[ARNDCQEGHILKMFPSTWYVBZJUOX]{15)C[ARNDCQEGHILKMFPSTWYVBZJUOX]{2)C', SUBSTR(?thisSequenceValue, ?thisPositionOn34, (?thisPositionOn35 - ?thisPositionOn34)))) . BIND(URI(CONCAT(STR(?this), '#MF_00371a31')) AS ?annotation31) . BIND(?this AS ?pfs30) . } OPTIONAL { ?this a up:Protein . BIND(?this AS ?caseWithTag77) . } BIND(IF(BOUND(?tagFTGRP_1), ?caseWithTag77, ?UNBOUND_VARIABLE) AS ?case4) . } "xsd:string |
| http://purl.uniprot.org/unirules/MF_00371 | http://www.w3.org/ns/shacl#rule | http://purl.uniprot.org/unirules/MF_00371#construct |