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http://purl.uniprot.org/unirules/MF_00700#constructhttp://spinrdf.org/sp#templateshttp://purl.uniprot.org/unirules/MF_00700#construct-template-list-0
http://purl.uniprot.org/unirules/MF_00700#constructhttp://www.w3.org/ns/shacl#construct"CONSTRUCT { _:260436 up:source unirule:MF_00700 . _:260437 up:source unirule:MF_00700 . _:260438 up:source unirule:MF_00700 . _:260439 up:source unirule:MF_00700 . _:260440 up:source unirule:MF_00700 . _:260441 up:source unirule:MF_00700 . _:260442 up:source unirule:MF_00700 . _:260443 up:source unirule:MF_00700 . _:260444 up:source unirule:MF_00700 . _:260445 up:source unirule:MF_00700 . _:260446 up:source unirule:MF_00700 . _:260447 up:source unirule:MF_00700 . _:260448 up:source unirule:MF_00700 . _:260449 up:source unirule:MF_00700 . _:260450 up:source unirule:MF_00700 . _:260451 up:source unirule:MF_00700 . _:260452 up:source unirule:MF_00700 . _:260453 up:source unirule:MF_00700 . _:260454 up:source unirule:MF_00700 . _:260455 up:source unirule:MF_00700 . ?this up:annotation ?annotation2 , ?annotation3 , ?annotation4 , ?annotation5 ; up:classifiedWith GO:0003899 , GO:0006269 , keyword:235 , keyword:240 , keyword:460 , keyword:464 , keyword:479 , keyword:548 , keyword:639 , keyword:804 , keyword:808 ; up:recommendedName ?name0 . ?name0 up:ecName '2.7.7.-' ; up:fullName 'DNA primase small subunit PriS' ; rdf:type up:Structured_Name . ?gene1 skos:prefLabel 'priS' . ?annotation2 a up:Function_Annotation ; rdfs:comment 'Catalytic subunit of DNA primase, an RNA polymerase that catalyzes the synthesis of short RNA molecules used as primers for DNA polymerase during DNA replication. The small subunit contains the primase catalytic core and has DNA synthesis activity on its own. Binding to the large subunit stabilizes and modulates the activity, increasing the rate of DNA synthesis while decreasing the length of the DNA fragments, and conferring RNA synthesis capability. The DNA polymerase activity may enable DNA primase to also catalyze primer extension after primer synthesis. May also play a role in DNA repair.' . ?annotation3 up:cofactor chebi:18420 , chebi:29035 ; rdf:type up:Cofactor_Annotation . ?annotation4 a up:Subunit_Annotation ; rdfs:comment 'Heterodimer of a small subunit (PriS) and a large subunit (PriL).' . ?annotation5 a up:Similarity_Annotation ; rdfs:comment 'Belongs to the eukaryotic-type primase small subunit family.' . ?pfs6 up:annotation ?annotation7 . ?annotation7 faldo:begin ?pfsb8 ; faldo:end ?pfse9 ; rdf:type up:Active_Site_Annotation . ?pfsb8 faldo:position ?thisPositionOn10 ; rdf:type faldo:ExactPosition . ?pfse9 faldo:position ?thisPositionOn11 ; rdf:type faldo:ExactPosition . ?pfs12 up:annotation ?annotation13 . ?annotation13 faldo:begin ?pfsb14 ; faldo:end ?pfse15 ; rdf:type up:Active_Site_Annotation . ?pfsb14 faldo:position ?thisPositionOn16 ; rdf:type faldo:ExactPosition . ?pfse15 faldo:position ?thisPositionOn17 ; rdf:type faldo:ExactPosition . ?pfs18 up:annotation ?annotation19 . ?annotation19 faldo:begin ?pfsb20 ; faldo:end ?pfse21 ; rdf:type up:Active_Site_Annotation . ?pfsb20 faldo:position ?thisPositionOn22 ; rdf:type faldo:ExactPosition . ?pfse21 faldo:position ?thisPositionOn23 ; rdf:type faldo:ExactPosition . _:260456 a rdf:Statement ; up:attribution _:260436 ; rdf:subject ?this ; rdf:predicate up:recommendedName ; rdf:object ?name0 . _:260457 a rdf:Statement ; up:attribution _:260437 ; rdf:subject ?gene1 ; rdf:predicate up:encodedBy ; rdf:object ?gene1 . _:260458 a rdf:Statement ; up:attribution _:260438 ; rdf:subject ?this ; rdf:predicate up:annotation ; rdf:object ?annotation2 . _:260459 a rdf:Statement ; up:attribution _:260439 ; rdf:subject ?this ; rdf:predicate up:annotation ; rdf:object ?annotation3 . _:260460 a rdf:Statement ; up:attribution _:260440 ; rdf:subject ?this ; rdf:predicate up:annotation ; rdf:object ?annotation4 . _:260461 a rdf:Statement ; up:attribution _:260441 ; rdf:subject ?this ; rdf:predicate up:annotation ; rdf:object ?annotation5 . _:260462 a rdf:Statement ; up:attribution _:260442 ; rdf:subject ?this ; rdf:predicate up:classifiedWith ; rdf:object keyword:235 . _:260463 a rdf:Statement ; up:attribution _:260443 ; rdf:subject ?this ; rdf:predicate up:classifiedWith ; rdf:object keyword:240 . _:260464 a rdf:Statement ; up:attribution _:260444 ; rdf:subject ?this ; rdf:predicate up:classifiedWith ; rdf:object keyword:460 . _:260465 a rdf:Statement ; up:attribution _:260445 ; rdf:subject ?this ; rdf:predicate up:classifiedWith ; rdf:object keyword:464 . _:260466 a rdf:Statement ; up:attribution _:260446 ; rdf:subject ?this ; rdf:predicate up:classifiedWith ; rdf:object keyword:479 . _:260467 a rdf:Statement ; up:attribution _:260447 ; rdf:subject ?this ; rdf:predicate up:classifiedWith ; rdf:object keyword:548 . _:260468 a rdf:Statement ; up:attribution _:260448 ; rdf:subject ?this ; rdf:predicate up:classifiedWith ; rdf:object keyword:639 . _:260469 a rdf:Statement ; up:attribution _:260449 ; rdf:subject ?this ; rdf:predicate up:classifiedWith ; rdf:object keyword:804 . _:260470 a rdf:Statement ; up:attribution _:260450 ; rdf:subject ?this ; rdf:predicate up:classifiedWith ; rdf:object keyword:808 . _:260471 a rdf:Statement ; up:attribution _:260451 ; rdf:subject ?this ; rdf:predicate up:classifiedWith ; rdf:object GO:0003899 . _:260472 a rdf:Statement ; up:attribution _:260452 ; rdf:subject ?this ; rdf:predicate up:classifiedWith ; rdf:object GO:0006269 . _:260473 a rdf:Statement ; up:source unirule:MF_00700 ; rdf:subject ?pfs6 ; rdf:predicate up:annotation ; rdf:object ?annotation7 . _:260474 a rdf:Statement ; up:attribution _:260453 ; rdf:subject ?pfs6 ; rdf:predicate up:annotation ; rdf:object ?annotation7 . _:260475 a rdf:Statement ; up:source unirule:MF_00700 ; rdf:subject ?pfs12 ; rdf:predicate up:annotation ; rdf:object ?annotation13 . _:260476 a rdf:Statement ; up:attribution _:260454 ; rdf:subject ?pfs12 ; rdf:predicate up:annotation ; rdf:object ?annotation13 . _:260477 a rdf:Statement ; up:source unirule:MF_00700 ; rdf:subject ?pfs18 ; rdf:predicate up:annotation ; rdf:object ?annotation19 . _:260478 a rdf:Statement ; up:attribution _:260455 ; rdf:subject ?pfs18 ; rdf:predicate up:annotation ; rdf:object ?annotation19 . } WHERE { #baseURI: http://purl.uniprot.org/unirule/MF_00700 #Rule MF_00700 Created by:? on:2005-02-28 Modified by:Catherine Rivoire on:2025-03-21 ?this up:organism ?thisOrganism ; rdfs:seeAlso signature:MF_00700 . ?thisOrganism rdfs:subClassOf+ taxon:2157 . BIND(URI(CONCAT(STR(?this), '#MF_00700a0')) AS ?name0) . BIND(URI(CONCAT(STR(?this), '#MF_00700a2')) AS ?annotation2) . BIND(URI(CONCAT(STR(?this), '#MF_00700a3')) AS ?annotation3) . BIND(URI(CONCAT(STR(?this), '#MF_00700a4')) AS ?annotation4) . BIND(URI(CONCAT(STR(?this), '#MF_00700a5')) AS ?annotation5) . OPTIONAL { ?this up:sequence ?thisSequence . ?thisSequence rdf:value ?thisSequenceValue . ?templateMotifMatch28 faldo:location ?templateMotifSequenceMatchRegionO5793429 ; edam:is_output_of ?templateMotifSequenceProfileAlignmentOperationO5793431 ; rdf:type edam:data_0869 ; rdf:value ?templateMotifCigarO57934MF_0070024 . ?templateMotifSequenceMatchRegionO5793429 faldo:begin ?templateMotifSequenceMatchBeginO5793430 . ?templateMotifSequenceMatchBeginO5793430 faldo:position ?templateMotifSequenceMatchBeginPositionO5793425 ; faldo:reference isoform:O57934-1 . ?templateMotifSequenceProfileAlignmentOperationO5793431 edam:has_input signature:MF_00700 ; rdf:type edam:operation_0300 . ?targetMotifMatch32 faldo:location ?targetMotifMatchRegionMatch33 ; edam:is_output_of ?targetMotifSequenceAlignmentOperationMF_0070035 ; rdf:type edam:data_0869 ; rdf:value ?targetMotifMatchCigarO57934MF_0070026 . ?targetMotifMatchRegionMatch33 faldo:begin ?targetMotifMatchRegionMatchBeginMF_0070034 . ?targetMotifMatchRegionMatchBeginMF_0070034 faldo:position ?targetMotifMatchRegionMatchBeginPositionMF_0070027 ; faldo:reference ?thisSequence . ?targetMotifSequenceAlignmentOperationMF_0070035 edam:has_input signature:MF_00700 ; rdf:type edam:operation_0300 . BIND(STRLEN(REPLACE(SUBSTR(?templateMotifCigarO57934MF_0070024, 1, (STRLEN(?templateMotifCigarO57934MF_0070024) - STRLEN(REPLACE(?templateMotifCigarO57934MF_0070024, CONCAT('^(?:-*[^-]){', STR(((95 - ?templateMotifSequenceMatchBeginPositionO5793425) + 1)), '}'), '')))), '[a-z]', '')) AS ?step136) . BIND((STRLEN(SUBSTR(?targetMotifMatchCigarO57934MF_0070026, 1, (STRLEN(?targetMotifMatchCigarO57934MF_0070026) - STRLEN(REPLACE(?targetMotifMatchCigarO57934MF_0070026, CONCAT('^(?:[a-z]*(?:[A-Z]|-)){', STR(?step136), '}'), ''))))) - STRLEN(REPLACE(SUBSTR(?targetMotifMatchCigarO57934MF_0070026, 1, (STRLEN(?targetMotifMatchCigarO57934MF_0070026) - STRLEN(REPLACE(?targetMotifMatchCigarO57934MF_0070026, CONCAT('^(?:[a-z]*(?:[A-Z]|-)){', STR(?step136), '}'), '')))), '[^-]', ''))) AS ?step237) . BIND(((?step237 + ?targetMotifMatchRegionMatchBeginPositionMF_0070027) - 1) AS ?thisPositionOn10) . BIND(?thisPositionOn10 AS ?thisPositionOn11) . BIND(?this AS ?pfs1t38) . BIND(URI(CONCAT(STR(?thisSequence), '#position', STR(?thisPositionOn10))) AS ?pfsb8) . BIND(URI(CONCAT(STR(?thisSequence), '#position', STR(?thisPositionOn11))) AS ?pfse9) . FILTER ((SUBSTR(?thisSequenceValue, ?thisPositionOn10, 1) = 'D')) . BIND(URI(CONCAT(STR(?this), '#MF_00700a7')) AS ?annotation7) . BIND(?this AS ?pfs6) . } OPTIONAL { ?this up:sequence ?thisSequence . ?thisSequence rdf:value ?thisSequenceValue . ?templateMotifMatch43 faldo:location ?templateMotifSequenceMatchRegionO5793444 ; edam:is_output_of ?templateMotifSequenceProfileAlignmentOperationO5793446 ; rdf:type edam:data_0869 ; rdf:value ?templateMotifCigarO57934MF_0070039 . ?templateMotifSequenceMatchRegionO5793444 faldo:begin ?templateMotifSequenceMatchBeginO5793445 . ?templateMotifSequenceMatchBeginO5793445 faldo:position ?templateMotifSequenceMatchBeginPositionO5793440 ; faldo:reference isoform:O57934-1 . ?templateMotifSequenceProfileAlignmentOperationO5793446 edam:has_input signature:MF_00700 ; rdf:type edam:operation_0300 . ?targetMotifMatch47 faldo:location ?targetMotifMatchRegionMatch48 ; edam:is_output_of ?targetMotifSequenceAlignmentOperationMF_0070050 ; rdf:type edam:data_0869 ; rdf:value ?targetMotifMatchCigarO57934MF_0070041 . ?targetMotifMatchRegionMatch48 faldo:begin ?targetMotifMatchRegionMatchBeginMF_0070049 . ?targetMotifMatchRegionMatchBeginMF_0070049 faldo:position ?targetMotifMatchRegionMatchBeginPositionMF_0070042 ; faldo:reference ?thisSequence . ?targetMotifSequenceAlignmentOperationMF_0070050 edam:has_input signature:MF_00700 ; rdf:type edam:operation_0300 . BIND(STRLEN(REPLACE(SUBSTR(?templateMotifCigarO57934MF_0070039, 1, (STRLEN(?templateMotifCigarO57934MF_0070039) - STRLEN(REPLACE(?templateMotifCigarO57934MF_0070039, CONCAT('^(?:-*[^-]){', STR(((97 - ?templateMotifSequenceMatchBeginPositionO5793440) + 1)), '}'), '')))), '[a-z]', '')) AS ?step151) . BIND((STRLEN(SUBSTR(?targetMotifMatchCigarO57934MF_0070041, 1, (STRLEN(?targetMotifMatchCigarO57934MF_0070041) - STRLEN(REPLACE(?targetMotifMatchCigarO57934MF_0070041, CONCAT('^(?:[a-z]*(?:[A-Z]|-)){', STR(?step151), '}'), ''))))) - STRLEN(REPLACE(SUBSTR(?targetMotifMatchCigarO57934MF_0070041, 1, (STRLEN(?targetMotifMatchCigarO57934MF_0070041) - STRLEN(REPLACE(?targetMotifMatchCigarO57934MF_0070041, CONCAT('^(?:[a-z]*(?:[A-Z]|-)){', STR(?step151), '}'), '')))), '[^-]', ''))) AS ?step252) . BIND(((?step252 + ?targetMotifMatchRegionMatchBeginPositionMF_0070042) - 1) AS ?thisPositionOn16) . BIND(?thisPositionOn16 AS ?thisPositionOn17) . BIND(?this AS ?pfs1t53) . BIND(URI(CONCAT(STR(?thisSequence), '#position', STR(?thisPositionOn16))) AS ?pfsb14) . BIND(URI(CONCAT(STR(?thisSequence), '#position', STR(?thisPositionOn17))) AS ?pfse15) . FILTER ((SUBSTR(?thisSequenceValue, ?thisPositionOn16, 1) = 'D')) . BIND(URI(CONCAT(STR(?this), '#MF_00700a13')) AS ?annotation13) . BIND(?this AS ?pfs12) . } OPTIONAL { ?this up:sequence ?thisSequence . ?thisSequence rdf:value ?thisSequenceValue . ?templateMotifMatch58 faldo:location ?templateMotifSequenceMatchRegionO5793459 ; edam:is_output_of ?templateMotifSequenceProfileAlignmentOperationO5793461 ; rdf:type edam:data_0869 ; rdf:value ?templateMotifCigarO57934MF_0070054 . ?templateMotifSequenceMatchRegionO5793459 faldo:begin ?templateMotifSequenceMatchBeginO5793460 . ?templateMotifSequenceMatchBeginO5793460 faldo:position ?templateMotifSequenceMatchBeginPositionO5793455 ; faldo:reference isoform:O57934-1 . ?templateMotifSequenceProfileAlignmentOperationO5793461 edam:has_input signature:MF_00700 ; rdf:type edam:operation_0300 . ?targetMotifMatch62 faldo:location ?targetMotifMatchRegionMatch63 ; edam:is_output_of ?targetMotifSequenceAlignmentOperationMF_0070065 ; rdf:type edam:data_0869 ; rdf:value ?targetMotifMatchCigarO57934MF_0070056 . ?targetMotifMatchRegionMatch63 faldo:begin ?targetMotifMatchRegionMatchBeginMF_0070064 . ?targetMotifMatchRegionMatchBeginMF_0070064 faldo:position ?targetMotifMatchRegionMatchBeginPositionMF_0070057 ; faldo:reference ?thisSequence . ?targetMotifSequenceAlignmentOperationMF_0070065 edam:has_input signature:MF_00700 ; rdf:type edam:operation_0300 . BIND(STRLEN(REPLACE(SUBSTR(?templateMotifCigarO57934MF_0070054, 1, (STRLEN(?templateMotifCigarO57934MF_0070054) - STRLEN(REPLACE(?templateMotifCigarO57934MF_0070054, CONCAT('^(?:-*[^-]){', STR(((280 - ?templateMotifSequenceMatchBeginPositionO5793455) + 1)), '}'), '')))), '[a-z]', '')) AS ?step166) . BIND((STRLEN(SUBSTR(?targetMotifMatchCigarO57934MF_0070056, 1, (STRLEN(?targetMotifMatchCigarO57934MF_0070056) - STRLEN(REPLACE(?targetMotifMatchCigarO57934MF_0070056, CONCAT('^(?:[a-z]*(?:[A-Z]|-)){', STR(?step166), '}'), ''))))) - STRLEN(REPLACE(SUBSTR(?targetMotifMatchCigarO57934MF_0070056, 1, (STRLEN(?targetMotifMatchCigarO57934MF_0070056) - STRLEN(REPLACE(?targetMotifMatchCigarO57934MF_0070056, CONCAT('^(?:[a-z]*(?:[A-Z]|-)){', STR(?step166), '}'), '')))), '[^-]', ''))) AS ?step267) . BIND(((?step267 + ?targetMotifMatchRegionMatchBeginPositionMF_0070057) - 1) AS ?thisPositionOn22) . BIND(?thisPositionOn22 AS ?thisPositionOn23) . BIND(?this AS ?pfs1t68) . BIND(URI(CONCAT(STR(?thisSequence), '#position', STR(?thisPositionOn22))) AS ?pfsb20) . BIND(URI(CONCAT(STR(?thisSequence), '#position', STR(?thisPositionOn23))) AS ?pfse21) . FILTER ((SUBSTR(?thisSequenceValue, ?thisPositionOn22, 1) = 'D')) . BIND(URI(CONCAT(STR(?this), '#MF_00700a19')) AS ?annotation19) . BIND(?this AS ?pfs18) . } } "xsd:string
http://purl.uniprot.org/unirules/MF_00700http://www.w3.org/ns/shacl#rulehttp://purl.uniprot.org/unirules/MF_00700#construct
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