Home | Contact

Results

RDF/XMLNTriplesTurtleShow queryShare ◀
SubjectPredicateObject
http://purl.uniprot.org/unirules/MF_00701#constructhttps://hamap.expasy.org/rdf/vocab#addsTriplehttp://purl.uniprot.org/unirules/MF_00701#construct-template-80
http://purl.uniprot.org/unirules/MF_00701#constructhttp://www.w3.org/ns/shacl#prefixeshttp://purl.uniprot.org/unirules/
http://purl.uniprot.org/unirules/MF_00701#constructhttp://spinrdf.org/sp#wherehttp://purl.uniprot.org/unirules/MF_00701#construct-where-list-0
http://purl.uniprot.org/unirules/MF_00701#constructhttp://spinrdf.org/sp#templateshttp://purl.uniprot.org/unirules/MF_00701#construct-template-list-0
http://purl.uniprot.org/unirules/MF_00701#constructhttp://www.w3.org/ns/shacl#construct"CONSTRUCT { _:260788 up:source unirule:MF_00701 . _:260789 up:source unirule:MF_00701 . _:260790 up:source unirule:MF_00701 . _:260791 up:source unirule:MF_00701 . _:260792 up:source unirule:MF_00701 . _:260793 up:source unirule:MF_00701 . _:260794 up:source unirule:MF_00701 . _:260795 up:source unirule:MF_00701 . _:260796 up:source unirule:MF_00701 . _:260797 up:source unirule:MF_00701 . _:260798 up:source unirule:MF_00701 . _:260799 up:source unirule:MF_00701 . _:260800 up:source unirule:MF_00701 . _:260801 up:source unirule:MF_00701 . _:260802 up:source unirule:MF_00701 . _:260803 up:source unirule:MF_00701 . _:260804 up:source unirule:MF_00701 . ?this up:annotation ?annotation2 , ?annotation3 , ?annotation4 ; up:classifiedWith GO:0006269 , keyword:235 , keyword:639 ; up:recommendedName ?name0 . ?name0 up:fullName 'DNA primase large subunit PriL' ; rdf:type up:Structured_Name . ?gene1 skos:prefLabel 'priL' . ?annotation2 a up:Function_Annotation ; rdfs:comment 'Regulatory subunit of DNA primase, an RNA polymerase that catalyzes the synthesis of short RNA molecules used as primers for DNA polymerase during DNA replication. Stabilizes and modulates the activity of the small subunit, increasing the rate of DNA synthesis, and conferring RNA synthesis capability. The DNA polymerase activity may enable DNA primase to also catalyze primer extension after primer synthesis. May also play a role in DNA repair.' . ?annotation3 a up:Subunit_Annotation ; rdfs:comment 'Heterodimer of a small subunit (PriS) and a large subunit (PriL).' . ?annotation4 a up:Similarity_Annotation ; rdfs:comment 'Belongs to the eukaryotic-type primase large subunit family.' . ?case5 up:classifiedWith GO:0051539 , keyword:408 , keyword:411 , keyword:479 , keyword:4 . ?pfs6 up:annotation ?annotation7 , ?annotation13 , ?annotation19 , ?annotation25 . ?annotation7 faldo:begin ?pfsb8 ; faldo:end ?pfse9 ; up:ligand ?ligand10 ; rdf:type up:Binding_Site_Annotation . ?pfsb8 faldo:position ?thisPositionOn11 ; rdf:type faldo:ExactPosition . ?pfse9 faldo:position ?thisPositionOn12 ; rdf:type faldo:ExactPosition . ?ligand10 rdfs:subClassOf chebi:49883 . ?annotation13 faldo:begin ?pfsb14 ; faldo:end ?pfse15 ; up:ligand ?ligand16 ; rdf:type up:Binding_Site_Annotation . ?pfsb14 faldo:position ?thisPositionOn17 ; rdf:type faldo:ExactPosition . ?pfse15 faldo:position ?thisPositionOn18 ; rdf:type faldo:ExactPosition . ?ligand16 rdfs:subClassOf chebi:49883 . ?annotation19 faldo:begin ?pfsb20 ; faldo:end ?pfse21 ; up:ligand ?ligand22 ; rdf:type up:Binding_Site_Annotation . ?pfsb20 faldo:position ?thisPositionOn23 ; rdf:type faldo:ExactPosition . ?pfse21 faldo:position ?thisPositionOn24 ; rdf:type faldo:ExactPosition . ?ligand22 rdfs:subClassOf chebi:49883 . ?annotation25 faldo:begin ?pfsb26 ; faldo:end ?pfse27 ; up:ligand ?ligand28 ; rdf:type up:Binding_Site_Annotation . ?pfsb26 faldo:position ?thisPositionOn29 ; rdf:type faldo:ExactPosition . ?pfse27 faldo:position ?thisPositionOn30 ; rdf:type faldo:ExactPosition . ?ligand28 rdfs:subClassOf chebi:49883 . _:260805 a rdf:Statement ; up:attribution _:260788 ; rdf:subject ?this ; rdf:predicate up:recommendedName ; rdf:object ?name0 . _:260806 a rdf:Statement ; up:attribution _:260789 ; rdf:subject ?gene1 ; rdf:predicate up:encodedBy ; rdf:object ?gene1 . _:260807 a rdf:Statement ; up:attribution _:260790 ; rdf:subject ?this ; rdf:predicate up:annotation ; rdf:object ?annotation2 . _:260808 a rdf:Statement ; up:attribution _:260791 ; rdf:subject ?this ; rdf:predicate up:annotation ; rdf:object ?annotation3 . _:260809 a rdf:Statement ; up:attribution _:260792 ; rdf:subject ?this ; rdf:predicate up:annotation ; rdf:object ?annotation4 . _:260810 a rdf:Statement ; up:attribution _:260793 ; rdf:subject ?this ; rdf:predicate up:classifiedWith ; rdf:object keyword:235 . _:260811 a rdf:Statement ; up:attribution _:260794 ; rdf:subject ?this ; rdf:predicate up:classifiedWith ; rdf:object keyword:639 . _:260812 a rdf:Statement ; up:attribution _:260795 ; rdf:subject ?this ; rdf:predicate up:classifiedWith ; rdf:object GO:0006269 . _:260813 a rdf:Statement ; up:attribution _:260796 ; rdf:subject ?case5 ; rdf:predicate up:classifiedWith ; rdf:object keyword:4 . _:260814 a rdf:Statement ; up:attribution _:260797 ; rdf:subject ?case5 ; rdf:predicate up:classifiedWith ; rdf:object keyword:408 . _:260815 a rdf:Statement ; up:attribution _:260798 ; rdf:subject ?case5 ; rdf:predicate up:classifiedWith ; rdf:object keyword:411 . _:260816 a rdf:Statement ; up:attribution _:260799 ; rdf:subject ?case5 ; rdf:predicate up:classifiedWith ; rdf:object keyword:479 . _:260817 a rdf:Statement ; up:attribution _:260800 ; rdf:subject ?case5 ; rdf:predicate up:classifiedWith ; rdf:object GO:0051539 . _:260818 a rdf:Statement ; up:source unirule:MF_00701 ; rdf:subject ?pfs6 ; rdf:predicate up:annotation ; rdf:object ?annotation7 . _:260819 a rdf:Statement ; up:attribution _:260801 ; rdf:subject ?pfs6 ; rdf:predicate up:annotation ; rdf:object ?annotation7 . _:260820 a rdf:Statement ; up:source unirule:MF_00701 ; rdf:subject ?pfs6 ; rdf:predicate up:annotation ; rdf:object ?annotation13 . _:260821 a rdf:Statement ; up:attribution _:260802 ; rdf:subject ?pfs6 ; rdf:predicate up:annotation ; rdf:object ?annotation13 . _:260822 a rdf:Statement ; up:source unirule:MF_00701 ; rdf:subject ?pfs6 ; rdf:predicate up:annotation ; rdf:object ?annotation19 . _:260823 a rdf:Statement ; up:attribution _:260803 ; rdf:subject ?pfs6 ; rdf:predicate up:annotation ; rdf:object ?annotation19 . _:260824 a rdf:Statement ; up:source unirule:MF_00701 ; rdf:subject ?pfs6 ; rdf:predicate up:annotation ; rdf:object ?annotation25 . _:260825 a rdf:Statement ; up:attribution _:260804 ; rdf:subject ?pfs6 ; rdf:predicate up:annotation ; rdf:object ?annotation25 . } WHERE { #baseURI: http://purl.uniprot.org/unirule/MF_00701 #Rule MF_00701 Created by:? on:2005-02-28 Modified by:Catherine Rivoire on:2024-04-25 ?this up:organism ?thisOrganism ; rdfs:seeAlso signature:MF_00701 . ?thisOrganism rdfs:subClassOf+ taxon:2157 . BIND(URI(CONCAT(STR(?this), '#MF_00701a0')) AS ?name0) . BIND(URI(CONCAT(STR(?this), '#MF_00701a2')) AS ?annotation2) . BIND(URI(CONCAT(STR(?this), '#MF_00701a3')) AS ?annotation3) . BIND(URI(CONCAT(STR(?this), '#MF_00701a4')) AS ?annotation4) . OPTIONAL { ?this up:sequence ?thisSequence . ?thisSequence rdf:value ?thisSequenceValue . ?templateMotifMatch35 faldo:location ?templateMotifSequenceMatchRegionQ9UWW136 ; edam:is_output_of ?templateMotifSequenceProfileAlignmentOperationQ9UWW138 ; rdf:type edam:data_0869 ; rdf:value ?templateMotifCigarQ9UWW1MF_0070131 . ?templateMotifSequenceMatchRegionQ9UWW136 faldo:begin ?templateMotifSequenceMatchBeginQ9UWW137 . ?templateMotifSequenceMatchBeginQ9UWW137 faldo:position ?templateMotifSequenceMatchBeginPositionQ9UWW132 ; faldo:reference isoform:Q9UWW1-1 . ?templateMotifSequenceProfileAlignmentOperationQ9UWW138 edam:has_input signature:MF_00701 ; rdf:type edam:operation_0300 . ?targetMotifMatch39 faldo:location ?targetMotifMatchRegionMatch40 ; edam:is_output_of ?targetMotifSequenceAlignmentOperationMF_0070142 ; rdf:type edam:data_0869 ; rdf:value ?targetMotifMatchCigarQ9UWW1MF_0070133 . ?targetMotifMatchRegionMatch40 faldo:begin ?targetMotifMatchRegionMatchBeginMF_0070141 . ?targetMotifMatchRegionMatchBeginMF_0070141 faldo:position ?targetMotifMatchRegionMatchBeginPositionMF_0070134 ; faldo:reference ?thisSequence . ?targetMotifSequenceAlignmentOperationMF_0070142 edam:has_input signature:MF_00701 ; rdf:type edam:operation_0300 . BIND(?this AS ?tagFTGRP_1) . BIND(STRLEN(REPLACE(SUBSTR(?templateMotifCigarQ9UWW1MF_0070131, 1, (STRLEN(?templateMotifCigarQ9UWW1MF_0070131) - STRLEN(REPLACE(?templateMotifCigarQ9UWW1MF_0070131, CONCAT('^(?:-*[^-]){', STR(((216 - ?templateMotifSequenceMatchBeginPositionQ9UWW132) + 1)), '}'), '')))), '[a-z]', '')) AS ?step143) . BIND((STRLEN(SUBSTR(?targetMotifMatchCigarQ9UWW1MF_0070133, 1, (STRLEN(?targetMotifMatchCigarQ9UWW1MF_0070133) - STRLEN(REPLACE(?targetMotifMatchCigarQ9UWW1MF_0070133, CONCAT('^(?:[a-z]*(?:[A-Z]|-)){', STR(?step143), '}'), ''))))) - STRLEN(REPLACE(SUBSTR(?targetMotifMatchCigarQ9UWW1MF_0070133, 1, (STRLEN(?targetMotifMatchCigarQ9UWW1MF_0070133) - STRLEN(REPLACE(?targetMotifMatchCigarQ9UWW1MF_0070133, CONCAT('^(?:[a-z]*(?:[A-Z]|-)){', STR(?step143), '}'), '')))), '[^-]', ''))) AS ?step244) . BIND(((?step244 + ?targetMotifMatchRegionMatchBeginPositionMF_0070134) - 1) AS ?thisPositionOn11) . BIND(?thisPositionOn11 AS ?thisPositionOn12) . BIND(?this AS ?pfs1t45) . BIND(URI(CONCAT(STR(?thisSequence), '#position', STR(?thisPositionOn11))) AS ?pfsb8) . BIND(URI(CONCAT(STR(?thisSequence), '#position', STR(?thisPositionOn12))) AS ?pfse9) . FILTER ((SUBSTR(?thisSequenceValue, ?thisPositionOn11, 1) = 'C')) . BIND(STRLEN(REPLACE(SUBSTR(?templateMotifCigarQ9UWW1MF_0070131, 1, (STRLEN(?templateMotifCigarQ9UWW1MF_0070131) - STRLEN(REPLACE(?templateMotifCigarQ9UWW1MF_0070131, CONCAT('^(?:-*[^-]){', STR(((280 - ?templateMotifSequenceMatchBeginPositionQ9UWW132) + 1)), '}'), '')))), '[a-z]', '')) AS ?step146) . BIND((STRLEN(SUBSTR(?targetMotifMatchCigarQ9UWW1MF_0070133, 1, (STRLEN(?targetMotifMatchCigarQ9UWW1MF_0070133) - STRLEN(REPLACE(?targetMotifMatchCigarQ9UWW1MF_0070133, CONCAT('^(?:[a-z]*(?:[A-Z]|-)){', STR(?step146), '}'), ''))))) - STRLEN(REPLACE(SUBSTR(?targetMotifMatchCigarQ9UWW1MF_0070133, 1, (STRLEN(?targetMotifMatchCigarQ9UWW1MF_0070133) - STRLEN(REPLACE(?targetMotifMatchCigarQ9UWW1MF_0070133, CONCAT('^(?:[a-z]*(?:[A-Z]|-)){', STR(?step146), '}'), '')))), '[^-]', ''))) AS ?step247) . BIND(((?step247 + ?targetMotifMatchRegionMatchBeginPositionMF_0070134) - 1) AS ?thisPositionOn17) . BIND(?thisPositionOn17 AS ?thisPositionOn18) . BIND(?this AS ?pfs1t48) . BIND(URI(CONCAT(STR(?thisSequence), '#position', STR(?thisPositionOn17))) AS ?pfsb14) . BIND(URI(CONCAT(STR(?thisSequence), '#position', STR(?thisPositionOn18))) AS ?pfse15) . FILTER ((SUBSTR(?thisSequenceValue, ?thisPositionOn17, 1) = 'C')) . BIND(STRLEN(REPLACE(SUBSTR(?templateMotifCigarQ9UWW1MF_0070131, 1, (STRLEN(?templateMotifCigarQ9UWW1MF_0070131) - STRLEN(REPLACE(?templateMotifCigarQ9UWW1MF_0070131, CONCAT('^(?:-*[^-]){', STR(((289 - ?templateMotifSequenceMatchBeginPositionQ9UWW132) + 1)), '}'), '')))), '[a-z]', '')) AS ?step149) . BIND((STRLEN(SUBSTR(?targetMotifMatchCigarQ9UWW1MF_0070133, 1, (STRLEN(?targetMotifMatchCigarQ9UWW1MF_0070133) - STRLEN(REPLACE(?targetMotifMatchCigarQ9UWW1MF_0070133, CONCAT('^(?:[a-z]*(?:[A-Z]|-)){', STR(?step149), '}'), ''))))) - STRLEN(REPLACE(SUBSTR(?targetMotifMatchCigarQ9UWW1MF_0070133, 1, (STRLEN(?targetMotifMatchCigarQ9UWW1MF_0070133) - STRLEN(REPLACE(?targetMotifMatchCigarQ9UWW1MF_0070133, CONCAT('^(?:[a-z]*(?:[A-Z]|-)){', STR(?step149), '}'), '')))), '[^-]', ''))) AS ?step250) . BIND(((?step250 + ?targetMotifMatchRegionMatchBeginPositionMF_0070134) - 1) AS ?thisPositionOn23) . BIND(?thisPositionOn23 AS ?thisPositionOn24) . BIND(?this AS ?pfs1t51) . BIND(URI(CONCAT(STR(?thisSequence), '#position', STR(?thisPositionOn23))) AS ?pfsb20) . BIND(URI(CONCAT(STR(?thisSequence), '#position', STR(?thisPositionOn24))) AS ?pfse21) . FILTER ((SUBSTR(?thisSequenceValue, ?thisPositionOn23, 1) = 'C')) . BIND(STRLEN(REPLACE(SUBSTR(?templateMotifCigarQ9UWW1MF_0070131, 1, (STRLEN(?templateMotifCigarQ9UWW1MF_0070131) - STRLEN(REPLACE(?templateMotifCigarQ9UWW1MF_0070131, CONCAT('^(?:-*[^-]){', STR(((293 - ?templateMotifSequenceMatchBeginPositionQ9UWW132) + 1)), '}'), '')))), '[a-z]', '')) AS ?step152) . BIND((STRLEN(SUBSTR(?targetMotifMatchCigarQ9UWW1MF_0070133, 1, (STRLEN(?targetMotifMatchCigarQ9UWW1MF_0070133) - STRLEN(REPLACE(?targetMotifMatchCigarQ9UWW1MF_0070133, CONCAT('^(?:[a-z]*(?:[A-Z]|-)){', STR(?step152), '}'), ''))))) - STRLEN(REPLACE(SUBSTR(?targetMotifMatchCigarQ9UWW1MF_0070133, 1, (STRLEN(?targetMotifMatchCigarQ9UWW1MF_0070133) - STRLEN(REPLACE(?targetMotifMatchCigarQ9UWW1MF_0070133, CONCAT('^(?:[a-z]*(?:[A-Z]|-)){', STR(?step152), '}'), '')))), '[^-]', ''))) AS ?step253) . BIND(((?step253 + ?targetMotifMatchRegionMatchBeginPositionMF_0070134) - 1) AS ?thisPositionOn29) . BIND(?thisPositionOn29 AS ?thisPositionOn30) . BIND(?this AS ?pfs1t54) . BIND(URI(CONCAT(STR(?thisSequence), '#position', STR(?thisPositionOn29))) AS ?pfsb26) . BIND(URI(CONCAT(STR(?thisSequence), '#position', STR(?thisPositionOn30))) AS ?pfse27) . FILTER ((SUBSTR(?thisSequenceValue, ?thisPositionOn29, 1) = 'C')) . BIND(?this AS ?pfs6) . } OPTIONAL { ?this a up:Protein . BIND(?this AS ?caseWithTag55) . } BIND(IF(BOUND(?tagFTGRP_1), ?caseWithTag55, ?UNBOUND_VARIABLE) AS ?case5) . } "xsd:string
http://purl.uniprot.org/unirules/MF_00701http://www.w3.org/ns/shacl#rulehttp://purl.uniprot.org/unirules/MF_00701#construct
◀