| http://purl.uniprot.org/unirules/MF_00728#construct | http://www.w3.org/ns/shacl#construct | "CONSTRUCT {
_:267651 up:source unirule:MF_00728 .
_:267652 up:source unirule:MF_00728 .
_:267653 up:source unirule:MF_00728 .
_:267654 up:source unirule:MF_00728 .
_:267655 up:source unirule:MF_00728 .
_:267656 up:source unirule:MF_00728 .
_:267657 up:source unirule:MF_00728 .
_:267658 up:source unirule:MF_00728 .
_:267659 up:source unirule:MF_00728 .
_:267660 up:source unirule:MF_00728 .
_:267661 up:source unirule:MF_00728 .
_:267662 up:source unirule:MF_00728 .
_:267663 up:source unirule:MF_00728 .
_:267664 up:source unirule:MF_00728 .
_:267665 up:source unirule:MF_00728 .
_:267666 up:source unirule:MF_00728 .
_:267667 up:source unirule:MF_00728 .
_:267668 up:source unirule:MF_00728 .
_:267669 up:source unirule:MF_00728 .
?this up:annotation ?annotation2 ,
?annotation3 ,
?annotation5 ;
up:classifiedWith GO:0005886 ,
GO:0090529 ,
keyword:1003 ,
keyword:1133 ,
keyword:131 ,
keyword:132 ,
keyword:175 ,
keyword:472 ,
keyword:717 ,
keyword:812 ;
up:recommendedName ?name0 .
?name0 up:fullName 'Septation ring formation regulator EzrA' ;
rdf:type up:Structured_Name .
?gene1 skos:prefLabel 'ezrA' .
?annotation2 a up:Function_Annotation ;
rdfs:comment 'Negative regulator of FtsZ ring formation; modulates the frequency and position of FtsZ ring formation. Inhibits FtsZ ring formation at polar sites. Interacts either with FtsZ or with one of its binding partners to promote depolymerization.' .
?annotation3 a up:Subcellular_Location_Annotation ;
rdfs:comment 'Colocalized with FtsZ to the nascent septal site' .
?annotation3li4 up:cellularComponent .
?annotation5 a up:Similarity_Annotation ;
rdfs:comment 'Belongs to the EzrA family.' .
?pfs6 up:annotation ?annotation7 .
?annotation7 faldo:begin ?pfsb8 ;
faldo:end ?pfse9 ;
rdf:type up:Topological_Domain_Annotation ;
rdfs:comment 'Extracellular' .
?pfsb8 faldo:position ?thisPositionOn10 ;
rdf:type faldo:ExactPosition .
?pfse9 faldo:position ?thisPositionOn11 ;
rdf:type faldo:ExactPosition .
?pfs12 up:annotation ?annotation13 .
?annotation13 faldo:begin ?pfsb14 ;
faldo:end ?pfse15 ;
rdf:type up:Transmembrane_Annotation ;
rdfs:comment 'Helical' .
?pfsb14 faldo:position ?thisPositionOn16 ;
rdf:type faldo:ExactPosition .
?pfse15 faldo:position ?thisPositionOn17 ;
rdf:type faldo:ExactPosition .
?pfs18 up:annotation ?annotation19 .
?annotation19 faldo:begin ?pfsb20 ;
faldo:end ?pfse21 ;
rdf:type up:Topological_Domain_Annotation ;
rdfs:comment 'Cytoplasmic' .
?pfsb20 faldo:position ?thisPositionOn22 ;
rdf:type faldo:ExactPosition .
?pfse21 faldo:position ?thisPositionOn23 ;
rdf:type faldo:ExactPosition .
?sam24 up:classifiedWith keyword:175 .
?coiledCoil25 faldo:begin ?coiledCoilb26 ;
faldo:end ?coiledCoile27 .
?coiledCoilb26 faldo:position ?coiledCoilbp28 .
?coiledCoile27 faldo:position ?coiledCoilep29 .
?keyword30 up:range ?coiledCoil25 .
_:267670 a rdf:Statement ;
up:attribution _:267651 ;
rdf:subject ?this ;
rdf:predicate up:recommendedName ;
rdf:object ?name0 .
_:267671 a rdf:Statement ;
up:attribution _:267652 ;
rdf:subject ?gene1 ;
rdf:predicate up:encodedBy ;
rdf:object ?gene1 .
_:267672 a rdf:Statement ;
up:attribution _:267653 ;
rdf:subject ?this ;
rdf:predicate up:annotation ;
rdf:object ?annotation2 .
_:267673 a rdf:Statement ;
up:attribution _:267654 ;
rdf:subject ?this ;
rdf:predicate up:annotation ;
rdf:object ?annotation3 .
_:267674 a rdf:Statement ;
up:attribution _:267655 ;
rdf:subject ?this ;
rdf:predicate up:annotation ;
rdf:object ?annotation5 .
_:267675 a rdf:Statement ;
up:attribution _:267656 ;
rdf:subject ?this ;
rdf:predicate up:classifiedWith ;
rdf:object keyword:131 .
_:267676 a rdf:Statement ;
up:attribution _:267657 ;
rdf:subject ?this ;
rdf:predicate up:classifiedWith ;
rdf:object keyword:132 .
_:267677 a rdf:Statement ;
up:attribution _:267658 ;
rdf:subject ?this ;
rdf:predicate up:classifiedWith ;
rdf:object keyword:1003 .
_:267678 a rdf:Statement ;
up:attribution _:267659 ;
rdf:subject ?this ;
rdf:predicate up:classifiedWith ;
rdf:object keyword:717 .
_:267679 a rdf:Statement ;
up:attribution _:267660 ;
rdf:subject ?this ;
rdf:predicate up:classifiedWith ;
rdf:object keyword:472 .
_:267680 a rdf:Statement ;
up:attribution _:267661 ;
rdf:subject ?this ;
rdf:predicate up:classifiedWith ;
rdf:object keyword:812 .
_:267681 a rdf:Statement ;
up:attribution _:267662 ;
rdf:subject ?this ;
rdf:predicate up:classifiedWith ;
rdf:object keyword:175 .
_:267682 a rdf:Statement ;
up:attribution _:267663 ;
rdf:subject ?this ;
rdf:predicate up:classifiedWith ;
rdf:object keyword:1133 .
_:267683 a rdf:Statement ;
up:attribution _:267664 ;
rdf:subject ?this ;
rdf:predicate up:classifiedWith ;
rdf:object GO:0090529 .
_:267684 a rdf:Statement ;
up:attribution _:267665 ;
rdf:subject ?this ;
rdf:predicate up:classifiedWith ;
rdf:object GO:0005886 .
_:267685 a rdf:Statement ;
up:source unirule:MF_00728 ;
rdf:subject ?pfs6 ;
rdf:predicate up:annotation ;
rdf:object ?annotation7 .
_:267686 a rdf:Statement ;
up:attribution _:267666 ;
rdf:subject ?pfs6 ;
rdf:predicate up:annotation ;
rdf:object ?annotation7 .
_:267687 a rdf:Statement ;
up:source unirule:MF_00728 ;
rdf:subject ?pfs12 ;
rdf:predicate up:annotation ;
rdf:object ?annotation13 .
_:267688 a rdf:Statement ;
up:attribution _:267667 ;
rdf:subject ?pfs12 ;
rdf:predicate up:annotation ;
rdf:object ?annotation13 .
_:267689 a rdf:Statement ;
up:source unirule:MF_00728 ;
rdf:subject ?pfs18 ;
rdf:predicate up:annotation ;
rdf:object ?annotation19 .
_:267690 a rdf:Statement ;
up:attribution _:267668 ;
rdf:subject ?pfs18 ;
rdf:predicate up:annotation ;
rdf:object ?annotation19 .
_:267691 a rdf:Statement ;
up:attribution _:267669 ;
rdf:subject ?sam24 ;
rdf:predicate up:classifiedWith ;
rdf:object keyword:175 .
}
WHERE {
#baseURI: http://purl.uniprot.org/unirule/MF_00728
#Rule MF_00728 Created by:? on:2005-02-28 Modified by:Edouard de Castro on:2023-01-13
?this up:organism ?thisOrganism ;
rdfs:seeAlso signature:MF_00728 .
?thisOrganism rdfs:subClassOf+ taxon:1239 .
BIND(URI(CONCAT(STR(?this), '#MF_00728a0')) AS ?name0) .
BIND(URI(CONCAT(STR(?this), '#MF_00728a2')) AS ?annotation2) .
BIND(URI(CONCAT(STR(?this), '#MF_00728a3')) AS ?annotation3) .
BIND(URI(CONCAT(STR(?this), '#MF_00728a5')) AS ?annotation5) .
OPTIONAL {
?this up:sequence ?thisSequence .
?thisSequence rdf:value ?thisSequenceValue .
?templateMotifMatch35 faldo:location ?templateMotifSequenceMatchRegionO3489436 ;
edam:is_output_of ?templateMotifSequenceProfileAlignmentOperationO3489438 ;
rdf:type edam:data_0869 ;
rdf:value ?templateMotifCigarO34894MF_0072831 .
?templateMotifSequenceMatchRegionO3489436 faldo:begin ?templateMotifSequenceMatchBeginO3489437 .
?templateMotifSequenceMatchBeginO3489437 faldo:position ?templateMotifSequenceMatchBeginPositionO3489432 ;
faldo:reference isoform:O34894-1 .
?templateMotifSequenceProfileAlignmentOperationO3489438 edam:has_input signature:MF_00728 ;
rdf:type edam:operation_0300 .
?targetMotifMatch39 faldo:location ?targetMotifMatchRegionMatch40 ;
edam:is_output_of ?targetMotifSequenceAlignmentOperationMF_0072842 ;
rdf:type edam:data_0869 ;
rdf:value ?targetMotifMatchCigarO34894MF_0072833 .
?targetMotifMatchRegionMatch40 faldo:begin ?targetMotifMatchRegionMatchBeginMF_0072841 .
?targetMotifMatchRegionMatchBeginMF_0072841 faldo:position ?targetMotifMatchRegionMatchBeginPositionMF_0072834 ;
faldo:reference ?thisSequence .
?targetMotifSequenceAlignmentOperationMF_0072842 edam:has_input signature:MF_00728 ;
rdf:type edam:operation_0300 .
BIND(1 AS ?thisPositionOn10) .
BIND(STRLEN(REPLACE(SUBSTR(?templateMotifCigarO34894MF_0072831, 1, (STRLEN(?templateMotifCigarO34894MF_0072831) - STRLEN(REPLACE(?templateMotifCigarO34894MF_0072831, CONCAT('^(?:-*[^-]){', STR(((2 - ?templateMotifSequenceMatchBeginPositionO3489432) + 1)), '}'), '')))), '[a-z]', '')) AS ?step143) .
BIND((STRLEN(SUBSTR(?targetMotifMatchCigarO34894MF_0072833, 1, (STRLEN(?targetMotifMatchCigarO34894MF_0072833) - STRLEN(REPLACE(?targetMotifMatchCigarO34894MF_0072833, CONCAT('^(?:[a-z]*(?:[A-Z]|-)){', STR(?step143), '}'), ''))))) - STRLEN(REPLACE(SUBSTR(?targetMotifMatchCigarO34894MF_0072833, 1, (STRLEN(?targetMotifMatchCigarO34894MF_0072833) - STRLEN(REPLACE(?targetMotifMatchCigarO34894MF_0072833, CONCAT('^(?:[a-z]*(?:[A-Z]|-)){', STR(?step143), '}'), '')))), '[^-]', ''))) AS ?step244) .
BIND(((?step244 + ?targetMotifMatchRegionMatchBeginPositionMF_0072834) - 1) AS ?thisPositionOn11) .
BIND(?this AS ?pfs1t45) .
BIND(URI(CONCAT(STR(?thisSequence), '#position', STR(?thisPositionOn10))) AS ?pfsb8) .
BIND(URI(CONCAT(STR(?thisSequence), '#position', STR(?thisPositionOn11))) AS ?pfse9) .
FILTER ((BOUND(?thisPositionOn10) && BOUND(?thisPositionOn11))) .
BIND(URI(CONCAT(STR(?this), '#MF_00728a7')) AS ?annotation7) .
BIND(?this AS ?pfs6) .
}
OPTIONAL {
?this up:sequence ?thisSequence .
?thisSequence rdf:value ?thisSequenceValue .
?templateMotifMatch50 faldo:location ?templateMotifSequenceMatchRegionO3489451 ;
edam:is_output_of ?templateMotifSequenceProfileAlignmentOperationO3489453 ;
rdf:type edam:data_0869 ;
rdf:value ?templateMotifCigarO34894MF_0072846 .
?templateMotifSequenceMatchRegionO3489451 faldo:begin ?templateMotifSequenceMatchBeginO3489452 .
?templateMotifSequenceMatchBeginO3489452 faldo:position ?templateMotifSequenceMatchBeginPositionO3489447 ;
faldo:reference isoform:O34894-1 .
?templateMotifSequenceProfileAlignmentOperationO3489453 edam:has_input signature:MF_00728 ;
rdf:type edam:operation_0300 .
?targetMotifMatch54 faldo:location ?targetMotifMatchRegionMatch55 ;
edam:is_output_of ?targetMotifSequenceAlignmentOperationMF_0072857 ;
rdf:type edam:data_0869 ;
rdf:value ?targetMotifMatchCigarO34894MF_0072848 .
?targetMotifMatchRegionMatch55 faldo:begin ?targetMotifMatchRegionMatchBeginMF_0072856 .
?targetMotifMatchRegionMatchBeginMF_0072856 faldo:position ?targetMotifMatchRegionMatchBeginPositionMF_0072849 ;
faldo:reference ?thisSequence .
?targetMotifSequenceAlignmentOperationMF_0072857 edam:has_input signature:MF_00728 ;
rdf:type edam:operation_0300 .
BIND(STRLEN(REPLACE(SUBSTR(?templateMotifCigarO34894MF_0072846, 1, (STRLEN(?templateMotifCigarO34894MF_0072846) - STRLEN(REPLACE(?templateMotifCigarO34894MF_0072846, CONCAT('^(?:-*[^-]){', STR(((3 - ?templateMotifSequenceMatchBeginPositionO3489447) + 1)), '}'), '')))), '[a-z]', '')) AS ?step158) .
BIND((STRLEN(SUBSTR(?targetMotifMatchCigarO34894MF_0072848, 1, (STRLEN(?targetMotifMatchCigarO34894MF_0072848) - STRLEN(REPLACE(?targetMotifMatchCigarO34894MF_0072848, CONCAT('^(?:[a-z]*(?:[A-Z]|-)){', STR(?step158), '}'), ''))))) - STRLEN(REPLACE(SUBSTR(?targetMotifMatchCigarO34894MF_0072848, 1, (STRLEN(?targetMotifMatchCigarO34894MF_0072848) - STRLEN(REPLACE(?targetMotifMatchCigarO34894MF_0072848, CONCAT('^(?:[a-z]*(?:[A-Z]|-)){', STR(?step158), '}'), '')))), '[^-]', ''))) AS ?step259) .
BIND(((?step259 + ?targetMotifMatchRegionMatchBeginPositionMF_0072849) - 1) AS ?thisPositionOn16) .
BIND(STRLEN(REPLACE(SUBSTR(?templateMotifCigarO34894MF_0072846, 1, (STRLEN(?templateMotifCigarO34894MF_0072846) - STRLEN(REPLACE(?templateMotifCigarO34894MF_0072846, CONCAT('^(?:-*[^-]){', STR(((21 - ?templateMotifSequenceMatchBeginPositionO3489447) + 1)), '}'), '')))), '[a-z]', '')) AS ?step160) .
BIND((STRLEN(SUBSTR(?targetMotifMatchCigarO34894MF_0072848, 1, (STRLEN(?targetMotifMatchCigarO34894MF_0072848) - STRLEN(REPLACE(?targetMotifMatchCigarO34894MF_0072848, CONCAT('^(?:[a-z]*(?:[A-Z]|-)){', STR(?step160), '}'), ''))))) - STRLEN(REPLACE(SUBSTR(?targetMotifMatchCigarO34894MF_0072848, 1, (STRLEN(?targetMotifMatchCigarO34894MF_0072848) - STRLEN(REPLACE(?targetMotifMatchCigarO34894MF_0072848, CONCAT('^(?:[a-z]*(?:[A-Z]|-)){', STR(?step160), '}'), '')))), '[^-]', ''))) AS ?step261) .
BIND(((?step261 + ?targetMotifMatchRegionMatchBeginPositionMF_0072849) - 1) AS ?thisPositionOn17) .
BIND(?this AS ?pfs1t62) .
BIND(URI(CONCAT(STR(?thisSequence), '#position', STR(?thisPositionOn16))) AS ?pfsb14) .
BIND(URI(CONCAT(STR(?thisSequence), '#position', STR(?thisPositionOn17))) AS ?pfse15) .
FILTER ((BOUND(?thisPositionOn16) && BOUND(?thisPositionOn17))) .
BIND(URI(CONCAT(STR(?this), '#MF_00728a13')) AS ?annotation13) .
BIND(?this AS ?pfs12) .
}
OPTIONAL {
?this up:sequence ?thisSequence .
?thisSequence rdf:value ?thisSequenceValue .
?templateMotifMatch67 faldo:location ?templateMotifSequenceMatchRegionO3489468 ;
edam:is_output_of ?templateMotifSequenceProfileAlignmentOperationO3489470 ;
rdf:type edam:data_0869 ;
rdf:value ?templateMotifCigarO34894MF_0072863 .
?templateMotifSequenceMatchRegionO3489468 faldo:begin ?templateMotifSequenceMatchBeginO3489469 .
?templateMotifSequenceMatchBeginO3489469 faldo:position ?templateMotifSequenceMatchBeginPositionO3489464 ;
faldo:reference isoform:O34894-1 .
?templateMotifSequenceProfileAlignmentOperationO3489470 edam:has_input signature:MF_00728 ;
rdf:type edam:operation_0300 .
?targetMotifMatch71 faldo:location ?targetMotifMatchRegionMatch72 ;
edam:is_output_of ?targetMotifSequenceAlignmentOperationMF_0072874 ;
rdf:type edam:data_0869 ;
rdf:value ?targetMotifMatchCigarO34894MF_0072865 .
?targetMotifMatchRegionMatch72 faldo:begin ?targetMotifMatchRegionMatchBeginMF_0072873 .
?targetMotifMatchRegionMatchBeginMF_0072873 faldo:position ?targetMotifMatchRegionMatchBeginPositionMF_0072866 ;
faldo:reference ?thisSequence .
?targetMotifSequenceAlignmentOperationMF_0072874 edam:has_input signature:MF_00728 ;
rdf:type edam:operation_0300 .
BIND(STRLEN(REPLACE(SUBSTR(?templateMotifCigarO34894MF_0072863, 1, (STRLEN(?templateMotifCigarO34894MF_0072863) - STRLEN(REPLACE(?templateMotifCigarO34894MF_0072863, CONCAT('^(?:-*[^-]){', STR(((22 - ?templateMotifSequenceMatchBeginPositionO3489464) + 1)), '}'), '')))), '[a-z]', '')) AS ?step175) .
BIND((STRLEN(SUBSTR(?targetMotifMatchCigarO34894MF_0072865, 1, (STRLEN(?targetMotifMatchCigarO34894MF_0072865) - STRLEN(REPLACE(?targetMotifMatchCigarO34894MF_0072865, CONCAT('^(?:[a-z]*(?:[A-Z]|-)){', STR(?step175), '}'), ''))))) - STRLEN(REPLACE(SUBSTR(?targetMotifMatchCigarO34894MF_0072865, 1, (STRLEN(?targetMotifMatchCigarO34894MF_0072865) - STRLEN(REPLACE(?targetMotifMatchCigarO34894MF_0072865, CONCAT('^(?:[a-z]*(?:[A-Z]|-)){', STR(?step175), '}'), '')))), '[^-]', ''))) AS ?step276) .
BIND(((?step276 + ?targetMotifMatchRegionMatchBeginPositionMF_0072866) - 1) AS ?thisPositionOn22) .
BIND(STRLEN(?thisSequenceValue) AS ?thisPositionOn23) .
BIND(?this AS ?pfs1t77) .
BIND(URI(CONCAT(STR(?thisSequence), '#position', STR(?thisPositionOn22))) AS ?pfsb20) .
BIND(URI(CONCAT(STR(?thisSequence), '#position', STR(?thisPositionOn23))) AS ?pfse21) .
FILTER ((BOUND(?thisPositionOn22) && BOUND(?thisPositionOn23))) .
BIND(URI(CONCAT(STR(?this), '#MF_00728a19')) AS ?annotation19) .
BIND(?this AS ?pfs18) .
}
OPTIONAL {
?this up:annotation ?samcc78 ;
up:sequence ?thisSequence .
?samcc78 up:range ?samccr79 ;
rdf:type up:Coiled_Coil_Annotation .
?samccr79 faldo:begin ?samccb80 ;
faldo:end ?samcce81 .
?samccb80 faldo:position ?samccbp82 ;
faldo:reference ?thisSequence .
?samcce81 faldo:position ?samccep83 ;
faldo:reference ?thisSequence .
BIND(?this AS ?sam24) .
}
BIND(URI(CONCAT(STR(?this), '#MF_00728a30')) AS ?keyword30) .
}
"xsd:string |
