| http://purl.uniprot.org/unirules/MF_00767#construct | http://www.w3.org/ns/shacl#construct | "CONSTRUCT {
_:278197 up:source unirule:MF_00767 .
_:278198 up:source unirule:MF_00767 .
_:278199 up:source unirule:MF_00767 .
_:278200 up:source unirule:MF_00767 .
_:278201 up:source unirule:MF_00767 .
_:278202 up:source unirule:MF_00767 .
_:278203 up:source unirule:MF_00767 .
_:278204 up:source unirule:MF_00767 .
_:278205 up:source unirule:MF_00767 .
_:278206 up:source unirule:MF_00767 .
_:278207 up:source unirule:MF_00767 .
_:278208 up:source unirule:MF_00767 .
_:278209 up:source unirule:MF_00767 .
_:278210 up:source unirule:MF_00767 .
_:278211 up:source unirule:MF_00767 .
_:278212 up:source unirule:MF_00767 .
_:278213 up:source unirule:MF_00767 .
_:278214 up:source unirule:MF_00767 .
?this up:annotation ?annotation2 ,
?annotation3 ,
?annotation5 ,
?annotation6 ;
up:classifiedWith GO:0016788 ,
GO:0019544 ,
GO:0019545 ,
keyword:378 ,
keyword:56 ;
up:recommendedName ?name0 .
?name0 up:ecName '3.5.1.96' ;
up:fullName 'Succinylglutamate desuccinylase' ;
rdf:type up:Structured_Name .
?gene1 skos:prefLabel 'astE' .
?annotation2 a up:Function_Annotation ;
rdfs:comment 'Transforms N(2)-succinylglutamate into succinate and glutamate.' .
?annotation3 up:activity ?activity4 ;
rdf:type up:Catalytic_Activity_Annotation .
?activity4 up:catalyticActivity ;
up:enzymeClass .
?annotation5 a up:Pathway_Annotation ;
rdfs:comment 'Amino-acid degradation; L-arginine degradation via AST pathway; L-glutamate and succinate from L-arginine: step 5/5.' .
?annotation6 a up:Similarity_Annotation ;
rdfs:comment 'Belongs to the AspA/AstE family. Succinylglutamate desuccinylase subfamily.' .
?case7 up:classifiedWith GO:0008270 ,
keyword:479 ,
keyword:862 .
?pfs8 up:annotation ?annotation9 ,
?annotation15 ,
?annotation21 .
?annotation9 faldo:begin ?pfsb10 ;
faldo:end ?pfse11 ;
up:ligand ?ligand12 ;
rdf:type up:Binding_Site_Annotation .
?pfsb10 faldo:position ?thisPositionOn13 ;
rdf:type faldo:ExactPosition .
?pfse11 faldo:position ?thisPositionOn14 ;
rdf:type faldo:ExactPosition .
?ligand12 rdfs:subClassOf chebi:29105 .
?annotation15 faldo:begin ?pfsb16 ;
faldo:end ?pfse17 ;
up:ligand ?ligand18 ;
rdf:type up:Binding_Site_Annotation .
?pfsb16 faldo:position ?thisPositionOn19 ;
rdf:type faldo:ExactPosition .
?pfse17 faldo:position ?thisPositionOn20 ;
rdf:type faldo:ExactPosition .
?ligand18 rdfs:subClassOf chebi:29105 .
?annotation21 faldo:begin ?pfsb22 ;
faldo:end ?pfse23 ;
up:ligand ?ligand24 ;
rdf:type up:Binding_Site_Annotation .
?pfsb22 faldo:position ?thisPositionOn25 ;
rdf:type faldo:ExactPosition .
?pfse23 faldo:position ?thisPositionOn26 ;
rdf:type faldo:ExactPosition .
?ligand24 rdfs:subClassOf chebi:29105 .
?pfs27 up:annotation ?annotation28 .
?annotation28 faldo:begin ?pfsb29 ;
faldo:end ?pfse30 ;
rdf:type up:Active_Site_Annotation .
?pfsb29 faldo:position ?thisPositionOn31 ;
rdf:type faldo:ExactPosition .
?pfse30 faldo:position ?thisPositionOn32 ;
rdf:type faldo:ExactPosition .
_:278215 a rdf:Statement ;
up:attribution _:278197 ;
rdf:subject ?this ;
rdf:predicate up:recommendedName ;
rdf:object ?name0 .
_:278216 a rdf:Statement ;
up:attribution _:278198 ;
rdf:subject ?gene1 ;
rdf:predicate up:encodedBy ;
rdf:object ?gene1 .
_:278217 a rdf:Statement ;
up:attribution _:278199 ;
rdf:subject ?this ;
rdf:predicate up:annotation ;
rdf:object ?annotation2 .
_:278218 a rdf:Statement ;
up:attribution _:278200 ;
rdf:subject ?this ;
rdf:predicate up:annotation ;
rdf:object ?annotation3 .
_:278219 a rdf:Statement ;
up:attribution _:278201 ;
rdf:subject ?this ;
rdf:predicate up:annotation ;
rdf:object ?annotation5 .
_:278220 a rdf:Statement ;
up:attribution _:278202 ;
rdf:subject ?this ;
rdf:predicate up:annotation ;
rdf:object ?annotation6 .
_:278221 a rdf:Statement ;
up:attribution _:278203 ;
rdf:subject ?this ;
rdf:predicate up:classifiedWith ;
rdf:object keyword:56 .
_:278222 a rdf:Statement ;
up:attribution _:278204 ;
rdf:subject ?this ;
rdf:predicate up:classifiedWith ;
rdf:object keyword:378 .
_:278223 a rdf:Statement ;
up:attribution _:278205 ;
rdf:subject ?this ;
rdf:predicate up:classifiedWith ;
rdf:object GO:0016788 .
_:278224 a rdf:Statement ;
up:attribution _:278206 ;
rdf:subject ?this ;
rdf:predicate up:classifiedWith ;
rdf:object GO:0019544 .
_:278225 a rdf:Statement ;
up:attribution _:278207 ;
rdf:subject ?this ;
rdf:predicate up:classifiedWith ;
rdf:object GO:0019545 .
_:278226 a rdf:Statement ;
up:attribution _:278208 ;
rdf:subject ?case7 ;
rdf:predicate up:classifiedWith ;
rdf:object keyword:862 .
_:278227 a rdf:Statement ;
up:attribution _:278209 ;
rdf:subject ?case7 ;
rdf:predicate up:classifiedWith ;
rdf:object keyword:479 .
_:278228 a rdf:Statement ;
up:attribution _:278210 ;
rdf:subject ?case7 ;
rdf:predicate up:classifiedWith ;
rdf:object GO:0008270 .
_:278229 a rdf:Statement ;
up:source unirule:MF_00767 ;
rdf:subject ?pfs8 ;
rdf:predicate up:annotation ;
rdf:object ?annotation9 .
_:278230 a rdf:Statement ;
up:attribution _:278211 ;
rdf:subject ?pfs8 ;
rdf:predicate up:annotation ;
rdf:object ?annotation9 .
_:278231 a rdf:Statement ;
up:source unirule:MF_00767 ;
rdf:subject ?pfs8 ;
rdf:predicate up:annotation ;
rdf:object ?annotation15 .
_:278232 a rdf:Statement ;
up:attribution _:278212 ;
rdf:subject ?pfs8 ;
rdf:predicate up:annotation ;
rdf:object ?annotation15 .
_:278233 a rdf:Statement ;
up:source unirule:MF_00767 ;
rdf:subject ?pfs8 ;
rdf:predicate up:annotation ;
rdf:object ?annotation21 .
_:278234 a rdf:Statement ;
up:attribution _:278213 ;
rdf:subject ?pfs8 ;
rdf:predicate up:annotation ;
rdf:object ?annotation21 .
_:278235 a rdf:Statement ;
up:source unirule:MF_00767 ;
rdf:subject ?pfs27 ;
rdf:predicate up:annotation ;
rdf:object ?annotation28 .
_:278236 a rdf:Statement ;
up:attribution _:278214 ;
rdf:subject ?pfs27 ;
rdf:predicate up:annotation ;
rdf:object ?annotation28 .
}
WHERE {
#baseURI: http://purl.uniprot.org/unirule/MF_00767
#Rule MF_00767 Created by:? on:2005-02-28 Modified by:Catherine Rivoire on:2025-09-18
?this up:organism ?thisOrganism ;
rdfs:seeAlso signature:MF_00767 .
?thisOrganism rdfs:subClassOf+ taxon:1224 .
BIND(URI(CONCAT(STR(?this), '#MF_00767a0')) AS ?name0) .
BIND(URI(CONCAT(STR(?this), '#MF_00767a2')) AS ?annotation2) .
BIND(URI(CONCAT(STR(?this), '#MF_00767a3')) AS ?annotation3) .
BIND(URI(CONCAT(STR(?this), '#MF_00767a5')) AS ?annotation5) .
BIND(URI(CONCAT(STR(?this), '#MF_00767a6')) AS ?annotation6) .
OPTIONAL {
?this up:sequence ?thisSequence .
?thisSequence rdf:value ?thisSequenceValue .
?templateMotifMatch37 faldo:location ?templateMotifSequenceMatchRegionQ7NU2638 ;
edam:is_output_of ?templateMotifSequenceProfileAlignmentOperationQ7NU2640 ;
rdf:type edam:data_0869 ;
rdf:value ?templateMotifCigarQ7NU26MF_0076733 .
?templateMotifSequenceMatchRegionQ7NU2638 faldo:begin ?templateMotifSequenceMatchBeginQ7NU2639 .
?templateMotifSequenceMatchBeginQ7NU2639 faldo:position ?templateMotifSequenceMatchBeginPositionQ7NU2634 ;
faldo:reference isoform:Q7NU26-1 .
?templateMotifSequenceProfileAlignmentOperationQ7NU2640 edam:has_input signature:MF_00767 ;
rdf:type edam:operation_0300 .
?targetMotifMatch41 faldo:location ?targetMotifMatchRegionMatch42 ;
edam:is_output_of ?targetMotifSequenceAlignmentOperationMF_0076744 ;
rdf:type edam:data_0869 ;
rdf:value ?targetMotifMatchCigarQ7NU26MF_0076735 .
?targetMotifMatchRegionMatch42 faldo:begin ?targetMotifMatchRegionMatchBeginMF_0076743 .
?targetMotifMatchRegionMatchBeginMF_0076743 faldo:position ?targetMotifMatchRegionMatchBeginPositionMF_0076736 ;
faldo:reference ?thisSequence .
?targetMotifSequenceAlignmentOperationMF_0076744 edam:has_input signature:MF_00767 ;
rdf:type edam:operation_0300 .
BIND(?this AS ?tagFTGRP_1) .
BIND(STRLEN(REPLACE(SUBSTR(?templateMotifCigarQ7NU26MF_0076733, 1, (STRLEN(?templateMotifCigarQ7NU26MF_0076733) - STRLEN(REPLACE(?templateMotifCigarQ7NU26MF_0076733, CONCAT('^(?:-*[^-]){', STR(((56 - ?templateMotifSequenceMatchBeginPositionQ7NU2634) + 1)), '}'), '')))), '[a-z]', '')) AS ?step145) .
BIND((STRLEN(SUBSTR(?targetMotifMatchCigarQ7NU26MF_0076735, 1, (STRLEN(?targetMotifMatchCigarQ7NU26MF_0076735) - STRLEN(REPLACE(?targetMotifMatchCigarQ7NU26MF_0076735, CONCAT('^(?:[a-z]*(?:[A-Z]|-)){', STR(?step145), '}'), ''))))) - STRLEN(REPLACE(SUBSTR(?targetMotifMatchCigarQ7NU26MF_0076735, 1, (STRLEN(?targetMotifMatchCigarQ7NU26MF_0076735) - STRLEN(REPLACE(?targetMotifMatchCigarQ7NU26MF_0076735, CONCAT('^(?:[a-z]*(?:[A-Z]|-)){', STR(?step145), '}'), '')))), '[^-]', ''))) AS ?step246) .
BIND(((?step246 + ?targetMotifMatchRegionMatchBeginPositionMF_0076736) - 1) AS ?thisPositionOn13) .
BIND(?thisPositionOn13 AS ?thisPositionOn14) .
BIND(?this AS ?pfs1t47) .
BIND(URI(CONCAT(STR(?thisSequence), '#position', STR(?thisPositionOn13))) AS ?pfsb10) .
BIND(URI(CONCAT(STR(?thisSequence), '#position', STR(?thisPositionOn14))) AS ?pfse11) .
FILTER ((SUBSTR(?thisSequenceValue, ?thisPositionOn13, 1) = 'H')) .
BIND(STRLEN(REPLACE(SUBSTR(?templateMotifCigarQ7NU26MF_0076733, 1, (STRLEN(?templateMotifCigarQ7NU26MF_0076733) - STRLEN(REPLACE(?templateMotifCigarQ7NU26MF_0076733, CONCAT('^(?:-*[^-]){', STR(((59 - ?templateMotifSequenceMatchBeginPositionQ7NU2634) + 1)), '}'), '')))), '[a-z]', '')) AS ?step148) .
BIND((STRLEN(SUBSTR(?targetMotifMatchCigarQ7NU26MF_0076735, 1, (STRLEN(?targetMotifMatchCigarQ7NU26MF_0076735) - STRLEN(REPLACE(?targetMotifMatchCigarQ7NU26MF_0076735, CONCAT('^(?:[a-z]*(?:[A-Z]|-)){', STR(?step148), '}'), ''))))) - STRLEN(REPLACE(SUBSTR(?targetMotifMatchCigarQ7NU26MF_0076735, 1, (STRLEN(?targetMotifMatchCigarQ7NU26MF_0076735) - STRLEN(REPLACE(?targetMotifMatchCigarQ7NU26MF_0076735, CONCAT('^(?:[a-z]*(?:[A-Z]|-)){', STR(?step148), '}'), '')))), '[^-]', ''))) AS ?step249) .
BIND(((?step249 + ?targetMotifMatchRegionMatchBeginPositionMF_0076736) - 1) AS ?thisPositionOn19) .
BIND(?thisPositionOn19 AS ?thisPositionOn20) .
BIND(?this AS ?pfs1t50) .
BIND(URI(CONCAT(STR(?thisSequence), '#position', STR(?thisPositionOn19))) AS ?pfsb16) .
BIND(URI(CONCAT(STR(?thisSequence), '#position', STR(?thisPositionOn20))) AS ?pfse17) .
FILTER ((SUBSTR(?thisSequenceValue, ?thisPositionOn19, 1) = 'E')) .
BIND(STRLEN(REPLACE(SUBSTR(?templateMotifCigarQ7NU26MF_0076733, 1, (STRLEN(?templateMotifCigarQ7NU26MF_0076733) - STRLEN(REPLACE(?templateMotifCigarQ7NU26MF_0076733, CONCAT('^(?:-*[^-]){', STR(((149 - ?templateMotifSequenceMatchBeginPositionQ7NU2634) + 1)), '}'), '')))), '[a-z]', '')) AS ?step151) .
BIND((STRLEN(SUBSTR(?targetMotifMatchCigarQ7NU26MF_0076735, 1, (STRLEN(?targetMotifMatchCigarQ7NU26MF_0076735) - STRLEN(REPLACE(?targetMotifMatchCigarQ7NU26MF_0076735, CONCAT('^(?:[a-z]*(?:[A-Z]|-)){', STR(?step151), '}'), ''))))) - STRLEN(REPLACE(SUBSTR(?targetMotifMatchCigarQ7NU26MF_0076735, 1, (STRLEN(?targetMotifMatchCigarQ7NU26MF_0076735) - STRLEN(REPLACE(?targetMotifMatchCigarQ7NU26MF_0076735, CONCAT('^(?:[a-z]*(?:[A-Z]|-)){', STR(?step151), '}'), '')))), '[^-]', ''))) AS ?step252) .
BIND(((?step252 + ?targetMotifMatchRegionMatchBeginPositionMF_0076736) - 1) AS ?thisPositionOn25) .
BIND(?thisPositionOn25 AS ?thisPositionOn26) .
BIND(?this AS ?pfs1t53) .
BIND(URI(CONCAT(STR(?thisSequence), '#position', STR(?thisPositionOn25))) AS ?pfsb22) .
BIND(URI(CONCAT(STR(?thisSequence), '#position', STR(?thisPositionOn26))) AS ?pfse23) .
FILTER ((SUBSTR(?thisSequenceValue, ?thisPositionOn25, 1) = 'H')) .
BIND(?this AS ?pfs8) .
}
OPTIONAL {
?this up:sequence ?thisSequence .
?thisSequence rdf:value ?thisSequenceValue .
?templateMotifMatch58 faldo:location ?templateMotifSequenceMatchRegionQ7NU2659 ;
edam:is_output_of ?templateMotifSequenceProfileAlignmentOperationQ7NU2661 ;
rdf:type edam:data_0869 ;
rdf:value ?templateMotifCigarQ7NU26MF_0076754 .
?templateMotifSequenceMatchRegionQ7NU2659 faldo:begin ?templateMotifSequenceMatchBeginQ7NU2660 .
?templateMotifSequenceMatchBeginQ7NU2660 faldo:position ?templateMotifSequenceMatchBeginPositionQ7NU2655 ;
faldo:reference isoform:Q7NU26-1 .
?templateMotifSequenceProfileAlignmentOperationQ7NU2661 edam:has_input signature:MF_00767 ;
rdf:type edam:operation_0300 .
?targetMotifMatch62 faldo:location ?targetMotifMatchRegionMatch63 ;
edam:is_output_of ?targetMotifSequenceAlignmentOperationMF_0076765 ;
rdf:type edam:data_0869 ;
rdf:value ?targetMotifMatchCigarQ7NU26MF_0076756 .
?targetMotifMatchRegionMatch63 faldo:begin ?targetMotifMatchRegionMatchBeginMF_0076764 .
?targetMotifMatchRegionMatchBeginMF_0076764 faldo:position ?targetMotifMatchRegionMatchBeginPositionMF_0076757 ;
faldo:reference ?thisSequence .
?targetMotifSequenceAlignmentOperationMF_0076765 edam:has_input signature:MF_00767 ;
rdf:type edam:operation_0300 .
BIND(STRLEN(REPLACE(SUBSTR(?templateMotifCigarQ7NU26MF_0076754, 1, (STRLEN(?templateMotifCigarQ7NU26MF_0076754) - STRLEN(REPLACE(?templateMotifCigarQ7NU26MF_0076754, CONCAT('^(?:-*[^-]){', STR(((214 - ?templateMotifSequenceMatchBeginPositionQ7NU2655) + 1)), '}'), '')))), '[a-z]', '')) AS ?step166) .
BIND((STRLEN(SUBSTR(?targetMotifMatchCigarQ7NU26MF_0076756, 1, (STRLEN(?targetMotifMatchCigarQ7NU26MF_0076756) - STRLEN(REPLACE(?targetMotifMatchCigarQ7NU26MF_0076756, CONCAT('^(?:[a-z]*(?:[A-Z]|-)){', STR(?step166), '}'), ''))))) - STRLEN(REPLACE(SUBSTR(?targetMotifMatchCigarQ7NU26MF_0076756, 1, (STRLEN(?targetMotifMatchCigarQ7NU26MF_0076756) - STRLEN(REPLACE(?targetMotifMatchCigarQ7NU26MF_0076756, CONCAT('^(?:[a-z]*(?:[A-Z]|-)){', STR(?step166), '}'), '')))), '[^-]', ''))) AS ?step267) .
BIND(((?step267 + ?targetMotifMatchRegionMatchBeginPositionMF_0076757) - 1) AS ?thisPositionOn31) .
BIND(?thisPositionOn31 AS ?thisPositionOn32) .
BIND(?this AS ?pfs2t68) .
BIND(URI(CONCAT(STR(?thisSequence), '#position', STR(?thisPositionOn31))) AS ?pfsb29) .
BIND(URI(CONCAT(STR(?thisSequence), '#position', STR(?thisPositionOn32))) AS ?pfse30) .
FILTER ((SUBSTR(?thisSequenceValue, ?thisPositionOn31, 1) = 'E')) .
BIND(URI(CONCAT(STR(?this), '#MF_00767a28')) AS ?annotation28) .
BIND(?this AS ?pfs27) .
}
OPTIONAL {
?this a up:Protein .
BIND(?this AS ?caseWithTag69) .
}
BIND(IF(BOUND(?tagFTGRP_1), ?caseWithTag69, ?UNBOUND_VARIABLE) AS ?case7) .
}
"xsd:string |
