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http://purl.uniprot.org/unirules/MF_00777#constructhttps://hamap.expasy.org/rdf/vocab#addsTriplehttp://purl.uniprot.org/unirules/MF_00777#construct-template-87
http://purl.uniprot.org/unirules/MF_00777#constructhttps://hamap.expasy.org/rdf/vocab#addsTriplehttp://purl.uniprot.org/unirules/MF_00777#construct-template-100
http://purl.uniprot.org/unirules/MF_00777#constructhttps://hamap.expasy.org/rdf/vocab#addsTriplehttp://purl.uniprot.org/unirules/MF_00777#construct-template-67
http://purl.uniprot.org/unirules/MF_00777#constructhttps://hamap.expasy.org/rdf/vocab#addsTriplehttp://purl.uniprot.org/unirules/MF_00777#construct-template-82
http://purl.uniprot.org/unirules/MF_00777#constructhttps://hamap.expasy.org/rdf/vocab#addsTriplehttp://purl.uniprot.org/unirules/MF_00777#construct-template-85
http://purl.uniprot.org/unirules/MF_00777#constructhttp://www.w3.org/ns/shacl#prefixeshttp://purl.uniprot.org/unirules/
http://purl.uniprot.org/unirules/MF_00777#constructhttp://spinrdf.org/sp#wherehttp://purl.uniprot.org/unirules/MF_00777#construct-where-list-0
http://purl.uniprot.org/unirules/MF_00777#constructhttp://spinrdf.org/sp#templateshttp://purl.uniprot.org/unirules/MF_00777#construct-template-list-0
http://purl.uniprot.org/unirules/MF_00777#constructhttp://www.w3.org/ns/shacl#construct"CONSTRUCT { _:280852 up:source unirule:MF_00777 . _:280853 up:source unirule:MF_00777 . _:280854 up:source unirule:MF_00777 . _:280855 up:source unirule:MF_00777 . _:280856 up:source unirule:MF_00777 . _:280857 up:source unirule:MF_00777 . _:280858 up:source unirule:MF_00777 . _:280859 up:source unirule:MF_00777 . _:280860 up:source unirule:MF_00777 . _:280861 up:source unirule:MF_00777 . _:280862 up:source unirule:MF_00777 . _:280863 up:source unirule:MF_00777 . _:280864 up:source unirule:MF_00777 . _:280865 up:source unirule:MF_00777 . _:280866 up:source unirule:MF_00777 . _:280867 up:source unirule:MF_00777 . ?this up:annotation ?annotation2 , ?annotation3 ; up:classifiedWith GO:0006412 , keyword:687 , keyword:689 ; up:recommendedName ?name0 . ?name0 up:fullName 'Small ribosomal subunit protein eS31' ; rdf:type up:Structured_Name . ?gene1 skos:prefLabel 'rps27ae' . ?annotation2 a up:Subunit_Annotation ; rdfs:comment 'Part of the 30S ribosomal subunit.' . ?annotation3 a up:Similarity_Annotation ; rdfs:comment 'Belongs to the eukaryotic ribosomal protein eS31 family.' . ?case4 up:classifiedWith GO:0008270 , keyword:479 , keyword:862 , keyword:863 . ?pfs5 up:annotation ?annotation6 , ?annotation12 , ?annotation18 , ?annotation24 . ?annotation6 faldo:begin ?pfsb7 ; faldo:end ?pfse8 ; up:ligand ?ligand9 ; rdf:type up:Binding_Site_Annotation . ?pfsb7 faldo:position ?thisPositionOn10 ; rdf:type faldo:ExactPosition . ?pfse8 faldo:position ?thisPositionOn11 ; rdf:type faldo:ExactPosition . ?ligand9 rdfs:subClassOf chebi:29105 . ?annotation12 faldo:begin ?pfsb13 ; faldo:end ?pfse14 ; up:ligand ?ligand15 ; rdf:type up:Binding_Site_Annotation . ?pfsb13 faldo:position ?thisPositionOn16 ; rdf:type faldo:ExactPosition . ?pfse14 faldo:position ?thisPositionOn17 ; rdf:type faldo:ExactPosition . ?ligand15 rdfs:subClassOf chebi:29105 . ?annotation18 faldo:begin ?pfsb19 ; faldo:end ?pfse20 ; up:ligand ?ligand21 ; rdf:type up:Binding_Site_Annotation . ?pfsb19 faldo:position ?thisPositionOn22 ; rdf:type faldo:ExactPosition . ?pfse20 faldo:position ?thisPositionOn23 ; rdf:type faldo:ExactPosition . ?ligand21 rdfs:subClassOf chebi:29105 . ?annotation24 faldo:begin ?pfsb25 ; faldo:end ?pfse26 ; up:ligand ?ligand27 ; rdf:type up:Binding_Site_Annotation . ?pfsb25 faldo:position ?thisPositionOn28 ; rdf:type faldo:ExactPosition . ?pfse26 faldo:position ?thisPositionOn29 ; rdf:type faldo:ExactPosition . ?ligand27 rdfs:subClassOf chebi:29105 . ?pfs30 up:annotation ?annotation31 . ?annotation31 faldo:begin ?pfsb32 ; faldo:end ?pfse33 ; rdf:type up:Zinc_Finger_Annotation ; rdfs:comment 'C4-type' . ?pfsb32 faldo:position ?thisPositionOn34 ; rdf:type faldo:ExactPosition . ?pfse33 faldo:position ?thisPositionOn35 ; rdf:type faldo:ExactPosition . _:280868 a rdf:Statement ; up:attribution _:280852 ; rdf:subject ?this ; rdf:predicate up:recommendedName ; rdf:object ?name0 . _:280869 a rdf:Statement ; up:attribution _:280853 ; rdf:subject ?gene1 ; rdf:predicate up:encodedBy ; rdf:object ?gene1 . _:280870 a rdf:Statement ; up:attribution _:280854 ; rdf:subject ?this ; rdf:predicate up:annotation ; rdf:object ?annotation2 . _:280871 a rdf:Statement ; up:attribution _:280855 ; rdf:subject ?this ; rdf:predicate up:annotation ; rdf:object ?annotation3 . _:280872 a rdf:Statement ; up:attribution _:280856 ; rdf:subject ?this ; rdf:predicate up:classifiedWith ; rdf:object keyword:687 . _:280873 a rdf:Statement ; up:attribution _:280857 ; rdf:subject ?this ; rdf:predicate up:classifiedWith ; rdf:object keyword:689 . _:280874 a rdf:Statement ; up:attribution _:280858 ; rdf:subject ?this ; rdf:predicate up:classifiedWith ; rdf:object GO:0006412 . _:280875 a rdf:Statement ; up:attribution _:280859 ; rdf:subject ?case4 ; rdf:predicate up:classifiedWith ; rdf:object keyword:479 . _:280876 a rdf:Statement ; up:attribution _:280860 ; rdf:subject ?case4 ; rdf:predicate up:classifiedWith ; rdf:object keyword:862 . _:280877 a rdf:Statement ; up:attribution _:280861 ; rdf:subject ?case4 ; rdf:predicate up:classifiedWith ; rdf:object keyword:863 . _:280878 a rdf:Statement ; up:attribution _:280862 ; rdf:subject ?case4 ; rdf:predicate up:classifiedWith ; rdf:object GO:0008270 . _:280879 a rdf:Statement ; up:source unirule:MF_00777 ; rdf:subject ?pfs5 ; rdf:predicate up:annotation ; rdf:object ?annotation6 . _:280880 a rdf:Statement ; up:attribution _:280863 ; rdf:subject ?pfs5 ; rdf:predicate up:annotation ; rdf:object ?annotation6 . _:280881 a rdf:Statement ; up:source unirule:MF_00777 ; rdf:subject ?pfs5 ; rdf:predicate up:annotation ; rdf:object ?annotation12 . _:280882 a rdf:Statement ; up:attribution _:280864 ; rdf:subject ?pfs5 ; rdf:predicate up:annotation ; rdf:object ?annotation12 . _:280883 a rdf:Statement ; up:source unirule:MF_00777 ; rdf:subject ?pfs5 ; rdf:predicate up:annotation ; rdf:object ?annotation18 . _:280884 a rdf:Statement ; up:attribution _:280865 ; rdf:subject ?pfs5 ; rdf:predicate up:annotation ; rdf:object ?annotation18 . _:280885 a rdf:Statement ; up:source unirule:MF_00777 ; rdf:subject ?pfs5 ; rdf:predicate up:annotation ; rdf:object ?annotation24 . _:280886 a rdf:Statement ; up:attribution _:280866 ; rdf:subject ?pfs5 ; rdf:predicate up:annotation ; rdf:object ?annotation24 . _:280887 a rdf:Statement ; up:source unirule:MF_00777 ; rdf:subject ?pfs30 ; rdf:predicate up:annotation ; rdf:object ?annotation31 . _:280888 a rdf:Statement ; up:attribution _:280867 ; rdf:subject ?pfs30 ; rdf:predicate up:annotation ; rdf:object ?annotation31 . } WHERE { #baseURI: http://purl.uniprot.org/unirule/MF_00777 #Rule MF_00777 Created by:? on:2005-02-28 Modified by:Andrea Auchincloss on:2023-09-22 ?this up:organism ?thisOrganism ; rdfs:seeAlso signature:MF_00777 . ?thisOrganism rdfs:subClassOf+ taxon:2157 . BIND(URI(CONCAT(STR(?this), '#MF_00777a0')) AS ?name0) . BIND(URI(CONCAT(STR(?this), '#MF_00777a2')) AS ?annotation2) . BIND(URI(CONCAT(STR(?this), '#MF_00777a3')) AS ?annotation3) . OPTIONAL { ?this up:sequence ?thisSequence . ?thisSequence rdf:value ?thisSequenceValue . ?templateMotifMatch40 faldo:location ?templateMotifSequenceMatchRegionQ9HNL541 ; edam:is_output_of ?templateMotifSequenceProfileAlignmentOperationQ9HNL543 ; rdf:type edam:data_0869 ; rdf:value ?templateMotifCigarQ9HNL5MF_0077736 . ?templateMotifSequenceMatchRegionQ9HNL541 faldo:begin ?templateMotifSequenceMatchBeginQ9HNL542 . ?templateMotifSequenceMatchBeginQ9HNL542 faldo:position ?templateMotifSequenceMatchBeginPositionQ9HNL537 ; faldo:reference isoform:Q9HNL5-1 . ?templateMotifSequenceProfileAlignmentOperationQ9HNL543 edam:has_input signature:MF_00777 ; rdf:type edam:operation_0300 . ?targetMotifMatch44 faldo:location ?targetMotifMatchRegionMatch45 ; edam:is_output_of ?targetMotifSequenceAlignmentOperationMF_0077747 ; rdf:type edam:data_0869 ; rdf:value ?targetMotifMatchCigarQ9HNL5MF_0077738 . ?targetMotifMatchRegionMatch45 faldo:begin ?targetMotifMatchRegionMatchBeginMF_0077746 . ?targetMotifMatchRegionMatchBeginMF_0077746 faldo:position ?targetMotifMatchRegionMatchBeginPositionMF_0077739 ; faldo:reference ?thisSequence . ?targetMotifSequenceAlignmentOperationMF_0077747 edam:has_input signature:MF_00777 ; rdf:type edam:operation_0300 . BIND(?this AS ?tagFTGRP_1) . BIND(STRLEN(REPLACE(SUBSTR(?templateMotifCigarQ9HNL5MF_0077736, 1, (STRLEN(?templateMotifCigarQ9HNL5MF_0077736) - STRLEN(REPLACE(?templateMotifCigarQ9HNL5MF_0077736, CONCAT('^(?:-*[^-]){', STR(((18 - ?templateMotifSequenceMatchBeginPositionQ9HNL537) + 1)), '}'), '')))), '[a-z]', '')) AS ?step148) . BIND((STRLEN(SUBSTR(?targetMotifMatchCigarQ9HNL5MF_0077738, 1, (STRLEN(?targetMotifMatchCigarQ9HNL5MF_0077738) - STRLEN(REPLACE(?targetMotifMatchCigarQ9HNL5MF_0077738, CONCAT('^(?:[a-z]*(?:[A-Z]|-)){', STR(?step148), '}'), ''))))) - STRLEN(REPLACE(SUBSTR(?targetMotifMatchCigarQ9HNL5MF_0077738, 1, (STRLEN(?targetMotifMatchCigarQ9HNL5MF_0077738) - STRLEN(REPLACE(?targetMotifMatchCigarQ9HNL5MF_0077738, CONCAT('^(?:[a-z]*(?:[A-Z]|-)){', STR(?step148), '}'), '')))), '[^-]', ''))) AS ?step249) . BIND(((?step249 + ?targetMotifMatchRegionMatchBeginPositionMF_0077739) - 1) AS ?thisPositionOn10) . BIND(?thisPositionOn10 AS ?thisPositionOn11) . BIND(?this AS ?pfs1t50) . BIND(URI(CONCAT(STR(?thisSequence), '#position', STR(?thisPositionOn10))) AS ?pfsb7) . BIND(URI(CONCAT(STR(?thisSequence), '#position', STR(?thisPositionOn11))) AS ?pfse8) . FILTER ((SUBSTR(?thisSequenceValue, ?thisPositionOn10, 1) = 'C')) . BIND(STRLEN(REPLACE(SUBSTR(?templateMotifCigarQ9HNL5MF_0077736, 1, (STRLEN(?templateMotifCigarQ9HNL5MF_0077736) - STRLEN(REPLACE(?templateMotifCigarQ9HNL5MF_0077736, CONCAT('^(?:-*[^-]){', STR(((21 - ?templateMotifSequenceMatchBeginPositionQ9HNL537) + 1)), '}'), '')))), '[a-z]', '')) AS ?step151) . BIND((STRLEN(SUBSTR(?targetMotifMatchCigarQ9HNL5MF_0077738, 1, (STRLEN(?targetMotifMatchCigarQ9HNL5MF_0077738) - STRLEN(REPLACE(?targetMotifMatchCigarQ9HNL5MF_0077738, CONCAT('^(?:[a-z]*(?:[A-Z]|-)){', STR(?step151), '}'), ''))))) - STRLEN(REPLACE(SUBSTR(?targetMotifMatchCigarQ9HNL5MF_0077738, 1, (STRLEN(?targetMotifMatchCigarQ9HNL5MF_0077738) - STRLEN(REPLACE(?targetMotifMatchCigarQ9HNL5MF_0077738, CONCAT('^(?:[a-z]*(?:[A-Z]|-)){', STR(?step151), '}'), '')))), '[^-]', ''))) AS ?step252) . BIND(((?step252 + ?targetMotifMatchRegionMatchBeginPositionMF_0077739) - 1) AS ?thisPositionOn16) . BIND(?thisPositionOn16 AS ?thisPositionOn17) . BIND(?this AS ?pfs1t53) . BIND(URI(CONCAT(STR(?thisSequence), '#position', STR(?thisPositionOn16))) AS ?pfsb13) . BIND(URI(CONCAT(STR(?thisSequence), '#position', STR(?thisPositionOn17))) AS ?pfse14) . FILTER ((SUBSTR(?thisSequenceValue, ?thisPositionOn16, 1) = 'C')) . BIND(STRLEN(REPLACE(SUBSTR(?templateMotifCigarQ9HNL5MF_0077736, 1, (STRLEN(?templateMotifCigarQ9HNL5MF_0077736) - STRLEN(REPLACE(?templateMotifCigarQ9HNL5MF_0077736, CONCAT('^(?:-*[^-]){', STR(((35 - ?templateMotifSequenceMatchBeginPositionQ9HNL537) + 1)), '}'), '')))), '[a-z]', '')) AS ?step154) . BIND((STRLEN(SUBSTR(?targetMotifMatchCigarQ9HNL5MF_0077738, 1, (STRLEN(?targetMotifMatchCigarQ9HNL5MF_0077738) - STRLEN(REPLACE(?targetMotifMatchCigarQ9HNL5MF_0077738, CONCAT('^(?:[a-z]*(?:[A-Z]|-)){', STR(?step154), '}'), ''))))) - STRLEN(REPLACE(SUBSTR(?targetMotifMatchCigarQ9HNL5MF_0077738, 1, (STRLEN(?targetMotifMatchCigarQ9HNL5MF_0077738) - STRLEN(REPLACE(?targetMotifMatchCigarQ9HNL5MF_0077738, CONCAT('^(?:[a-z]*(?:[A-Z]|-)){', STR(?step154), '}'), '')))), '[^-]', ''))) AS ?step255) . BIND(((?step255 + ?targetMotifMatchRegionMatchBeginPositionMF_0077739) - 1) AS ?thisPositionOn22) . BIND(?thisPositionOn22 AS ?thisPositionOn23) . BIND(?this AS ?pfs1t56) . BIND(URI(CONCAT(STR(?thisSequence), '#position', STR(?thisPositionOn22))) AS ?pfsb19) . BIND(URI(CONCAT(STR(?thisSequence), '#position', STR(?thisPositionOn23))) AS ?pfse20) . FILTER ((SUBSTR(?thisSequenceValue, ?thisPositionOn22, 1) = 'C')) . BIND(STRLEN(REPLACE(SUBSTR(?templateMotifCigarQ9HNL5MF_0077736, 1, (STRLEN(?templateMotifCigarQ9HNL5MF_0077736) - STRLEN(REPLACE(?templateMotifCigarQ9HNL5MF_0077736, CONCAT('^(?:-*[^-]){', STR(((38 - ?templateMotifSequenceMatchBeginPositionQ9HNL537) + 1)), '}'), '')))), '[a-z]', '')) AS ?step157) . BIND((STRLEN(SUBSTR(?targetMotifMatchCigarQ9HNL5MF_0077738, 1, (STRLEN(?targetMotifMatchCigarQ9HNL5MF_0077738) - STRLEN(REPLACE(?targetMotifMatchCigarQ9HNL5MF_0077738, CONCAT('^(?:[a-z]*(?:[A-Z]|-)){', STR(?step157), '}'), ''))))) - STRLEN(REPLACE(SUBSTR(?targetMotifMatchCigarQ9HNL5MF_0077738, 1, (STRLEN(?targetMotifMatchCigarQ9HNL5MF_0077738) - STRLEN(REPLACE(?targetMotifMatchCigarQ9HNL5MF_0077738, CONCAT('^(?:[a-z]*(?:[A-Z]|-)){', STR(?step157), '}'), '')))), '[^-]', ''))) AS ?step258) . BIND(((?step258 + ?targetMotifMatchRegionMatchBeginPositionMF_0077739) - 1) AS ?thisPositionOn28) . BIND(?thisPositionOn28 AS ?thisPositionOn29) . BIND(?this AS ?pfs1t59) . BIND(URI(CONCAT(STR(?thisSequence), '#position', STR(?thisPositionOn28))) AS ?pfsb25) . BIND(URI(CONCAT(STR(?thisSequence), '#position', STR(?thisPositionOn29))) AS ?pfse26) . FILTER ((SUBSTR(?thisSequenceValue, ?thisPositionOn28, 1) = 'C')) . BIND(?this AS ?pfs5) . } OPTIONAL { ?this up:sequence ?thisSequence . ?thisSequence rdf:value ?thisSequenceValue . ?templateMotifMatch64 faldo:location ?templateMotifSequenceMatchRegionQ9HNL565 ; edam:is_output_of ?templateMotifSequenceProfileAlignmentOperationQ9HNL567 ; rdf:type edam:data_0869 ; rdf:value ?templateMotifCigarQ9HNL5MF_0077760 . ?templateMotifSequenceMatchRegionQ9HNL565 faldo:begin ?templateMotifSequenceMatchBeginQ9HNL566 . ?templateMotifSequenceMatchBeginQ9HNL566 faldo:position ?templateMotifSequenceMatchBeginPositionQ9HNL561 ; faldo:reference isoform:Q9HNL5-1 . ?templateMotifSequenceProfileAlignmentOperationQ9HNL567 edam:has_input signature:MF_00777 ; rdf:type edam:operation_0300 . ?targetMotifMatch68 faldo:location ?targetMotifMatchRegionMatch69 ; edam:is_output_of ?targetMotifSequenceAlignmentOperationMF_0077771 ; rdf:type edam:data_0869 ; rdf:value ?targetMotifMatchCigarQ9HNL5MF_0077762 . ?targetMotifMatchRegionMatch69 faldo:begin ?targetMotifMatchRegionMatchBeginMF_0077770 . ?targetMotifMatchRegionMatchBeginMF_0077770 faldo:position ?targetMotifMatchRegionMatchBeginPositionMF_0077763 ; faldo:reference ?thisSequence . ?targetMotifSequenceAlignmentOperationMF_0077771 edam:has_input signature:MF_00777 ; rdf:type edam:operation_0300 . BIND(STRLEN(REPLACE(SUBSTR(?templateMotifCigarQ9HNL5MF_0077760, 1, (STRLEN(?templateMotifCigarQ9HNL5MF_0077760) - STRLEN(REPLACE(?templateMotifCigarQ9HNL5MF_0077760, CONCAT('^(?:-*[^-]){', STR(((18 - ?templateMotifSequenceMatchBeginPositionQ9HNL561) + 1)), '}'), '')))), '[a-z]', '')) AS ?step172) . BIND((STRLEN(SUBSTR(?targetMotifMatchCigarQ9HNL5MF_0077762, 1, (STRLEN(?targetMotifMatchCigarQ9HNL5MF_0077762) - STRLEN(REPLACE(?targetMotifMatchCigarQ9HNL5MF_0077762, CONCAT('^(?:[a-z]*(?:[A-Z]|-)){', STR(?step172), '}'), ''))))) - STRLEN(REPLACE(SUBSTR(?targetMotifMatchCigarQ9HNL5MF_0077762, 1, (STRLEN(?targetMotifMatchCigarQ9HNL5MF_0077762) - STRLEN(REPLACE(?targetMotifMatchCigarQ9HNL5MF_0077762, CONCAT('^(?:[a-z]*(?:[A-Z]|-)){', STR(?step172), '}'), '')))), '[^-]', ''))) AS ?step273) . BIND(((?step273 + ?targetMotifMatchRegionMatchBeginPositionMF_0077763) - 1) AS ?thisPositionOn34) . BIND(STRLEN(REPLACE(SUBSTR(?templateMotifCigarQ9HNL5MF_0077760, 1, (STRLEN(?templateMotifCigarQ9HNL5MF_0077760) - STRLEN(REPLACE(?templateMotifCigarQ9HNL5MF_0077760, CONCAT('^(?:-*[^-]){', STR(((38 - ?templateMotifSequenceMatchBeginPositionQ9HNL561) + 1)), '}'), '')))), '[a-z]', '')) AS ?step174) . BIND((STRLEN(SUBSTR(?targetMotifMatchCigarQ9HNL5MF_0077762, 1, (STRLEN(?targetMotifMatchCigarQ9HNL5MF_0077762) - STRLEN(REPLACE(?targetMotifMatchCigarQ9HNL5MF_0077762, CONCAT('^(?:[a-z]*(?:[A-Z]|-)){', STR(?step174), '}'), ''))))) - STRLEN(REPLACE(SUBSTR(?targetMotifMatchCigarQ9HNL5MF_0077762, 1, (STRLEN(?targetMotifMatchCigarQ9HNL5MF_0077762) - STRLEN(REPLACE(?targetMotifMatchCigarQ9HNL5MF_0077762, CONCAT('^(?:[a-z]*(?:[A-Z]|-)){', STR(?step174), '}'), '')))), '[^-]', ''))) AS ?step275) . BIND(((?step275 + ?targetMotifMatchRegionMatchBeginPositionMF_0077763) - 1) AS ?thisPositionOn35) . BIND(?this AS ?pfs2t76) . BIND(URI(CONCAT(STR(?thisSequence), '#position', STR(?thisPositionOn34))) AS ?pfsb32) . BIND(URI(CONCAT(STR(?thisSequence), '#position', STR(?thisPositionOn35))) AS ?pfse33) . FILTER (REGEX('C[ARNDCQEGHILKMFPSTWYVBZJUOX]{2)C[ARNDCQEGHILKMFPSTWYVBZJUOX]{12,15)C[ARNDCQEGHILKMFPSTWYVBZJUOX]{2)C', SUBSTR(?thisSequenceValue, ?thisPositionOn34, (?thisPositionOn35 - ?thisPositionOn34)))) . BIND(URI(CONCAT(STR(?this), '#MF_00777a31')) AS ?annotation31) . BIND(?this AS ?pfs30) . } OPTIONAL { ?this a up:Protein . BIND(?this AS ?caseWithTag77) . } BIND(IF(BOUND(?tagFTGRP_1), ?caseWithTag77, ?UNBOUND_VARIABLE) AS ?case4) . } "xsd:string
http://purl.uniprot.org/unirules/MF_00777http://www.w3.org/ns/shacl#rulehttp://purl.uniprot.org/unirules/MF_00777#construct
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