| http://purl.uniprot.org/unirules/MF_01265#construct | http://www.w3.org/ns/shacl#construct | "CONSTRUCT {
_:448917 up:source unirule:MF_01265 .
_:448918 up:source unirule:MF_01265 .
_:448919 up:source unirule:MF_01265 .
_:448920 up:source unirule:MF_01265 .
_:448921 up:source unirule:MF_01265 .
_:448922 up:source unirule:MF_01265 .
_:448923 up:source unirule:MF_01265 .
_:448924 up:source unirule:MF_01265 .
_:448925 up:source unirule:MF_01265 .
_:448926 up:source unirule:MF_01265 .
_:448927 up:source unirule:MF_01265 .
_:448928 up:source unirule:MF_01265 .
_:448929 up:source unirule:MF_01265 .
_:448930 up:source unirule:MF_01265 .
_:448931 up:source unirule:MF_01265 .
_:448932 up:source unirule:MF_01265 .
_:448933 up:source unirule:MF_01265 .
_:448934 up:source unirule:MF_01265 .
_:448935 up:source unirule:MF_01265 .
?this up:annotation ?annotation2 ,
?annotation3 ,
?annotation5 ,
?annotation7 ,
?annotation8 ,
?annotation9 ;
up:classifiedWith GO:0009435 ,
GO:0016639 ,
GO:0050661 ,
GO:0051287 ,
keyword:520 ,
keyword:521 ,
keyword:560 ,
keyword:662 ;
up:recommendedName ?name0 .
?name0 up:ecName '1.4.1.21' ;
up:fullName 'L-aspartate dehydrogenase' ;
rdf:type up:Structured_Name .
?gene1 skos:prefLabel 'nadX' .
?annotation2 a up:Function_Annotation ;
rdfs:comment 'Specifically catalyzes the NAD or NADP-dependent dehydrogenation of L-aspartate to iminoaspartate.' .
?annotation3 up:activity ?activity4 ;
rdf:type up:Catalytic_Activity_Annotation .
?activity4 up:catalyticActivity ;
up:enzymeClass .
?annotation5 up:activity ?activity6 ;
rdf:type up:Catalytic_Activity_Annotation .
?activity6 up:catalyticActivity ;
up:enzymeClass .
?annotation7 a up:Pathway_Annotation ;
rdfs:comment 'Cofactor biosynthesis; NAD(+) biosynthesis; iminoaspartate from L-aspartate (dehydrogenase route): step 1/1.' .
?annotation8 a up:Annotation ;
rdfs:comment 'The iminoaspartate product is unstable in aqueous solution and can decompose to oxaloacetate and ammonia.' .
?annotation9 a up:Similarity_Annotation ;
rdfs:comment 'Belongs to the L-aspartate dehydrogenase family.' .
?pfs10 up:annotation ?annotation11 .
?annotation11 faldo:begin ?pfsb12 ;
faldo:end ?pfse13 ;
rdf:type up:Active_Site_Annotation .
?pfsb12 faldo:position ?thisPositionOn14 ;
rdf:type faldo:ExactPosition .
?pfse13 faldo:position ?thisPositionOn15 ;
rdf:type faldo:ExactPosition .
?pfs16 up:annotation ?annotation17 .
?annotation17 faldo:begin ?pfsb18 ;
faldo:end ?pfse19 ;
up:ligand ?ligand20 ;
rdf:type up:Binding_Site_Annotation .
?pfsb18 faldo:position ?thisPositionOn21 ;
rdf:type faldo:ExactPosition .
?pfse19 faldo:position ?thisPositionOn22 ;
rdf:type faldo:ExactPosition .
?ligand20 rdfs:subClassOf chebi:57540 .
?pfs23 up:annotation ?annotation24 .
?annotation24 faldo:begin ?pfsb25 ;
faldo:end ?pfse26 ;
up:ligand ?ligand27 ;
rdf:type up:Binding_Site_Annotation .
?pfsb25 faldo:position ?thisPositionOn28 ;
rdf:type faldo:ExactPosition .
?pfse26 faldo:position ?thisPositionOn29 ;
rdf:type faldo:ExactPosition .
?ligand27 rdfs:subClassOf chebi:57540 .
_:448936 a rdf:Statement ;
up:attribution _:448917 ;
rdf:subject ?this ;
rdf:predicate up:recommendedName ;
rdf:object ?name0 .
_:448937 a rdf:Statement ;
up:attribution _:448918 ;
rdf:subject ?gene1 ;
rdf:predicate up:encodedBy ;
rdf:object ?gene1 .
_:448938 a rdf:Statement ;
up:attribution _:448919 ;
rdf:subject ?this ;
rdf:predicate up:annotation ;
rdf:object ?annotation2 .
_:448939 a rdf:Statement ;
up:attribution _:448920 ;
rdf:subject ?this ;
rdf:predicate up:annotation ;
rdf:object ?annotation3 .
_:448940 a rdf:Statement ;
up:attribution _:448921 ;
rdf:subject ?this ;
rdf:predicate up:annotation ;
rdf:object ?annotation5 .
_:448941 a rdf:Statement ;
up:attribution _:448922 ;
rdf:subject ?this ;
rdf:predicate up:annotation ;
rdf:object ?annotation7 .
_:448942 a rdf:Statement ;
up:attribution _:448923 ;
rdf:subject ?this ;
rdf:predicate up:annotation ;
rdf:object ?annotation8 .
_:448943 a rdf:Statement ;
up:attribution _:448924 ;
rdf:subject ?this ;
rdf:predicate up:annotation ;
rdf:object ?annotation9 .
_:448944 a rdf:Statement ;
up:attribution _:448925 ;
rdf:subject ?this ;
rdf:predicate up:classifiedWith ;
rdf:object keyword:520 .
_:448945 a rdf:Statement ;
up:attribution _:448926 ;
rdf:subject ?this ;
rdf:predicate up:classifiedWith ;
rdf:object keyword:521 .
_:448946 a rdf:Statement ;
up:attribution _:448927 ;
rdf:subject ?this ;
rdf:predicate up:classifiedWith ;
rdf:object keyword:560 .
_:448947 a rdf:Statement ;
up:attribution _:448928 ;
rdf:subject ?this ;
rdf:predicate up:classifiedWith ;
rdf:object keyword:662 .
_:448948 a rdf:Statement ;
up:attribution _:448929 ;
rdf:subject ?this ;
rdf:predicate up:classifiedWith ;
rdf:object GO:0016639 .
_:448949 a rdf:Statement ;
up:attribution _:448930 ;
rdf:subject ?this ;
rdf:predicate up:classifiedWith ;
rdf:object GO:0050661 .
_:448950 a rdf:Statement ;
up:attribution _:448931 ;
rdf:subject ?this ;
rdf:predicate up:classifiedWith ;
rdf:object GO:0051287 .
_:448951 a rdf:Statement ;
up:attribution _:448932 ;
rdf:subject ?this ;
rdf:predicate up:classifiedWith ;
rdf:object GO:0009435 .
_:448952 a rdf:Statement ;
up:source unirule:MF_01265 ;
rdf:subject ?pfs10 ;
rdf:predicate up:annotation ;
rdf:object ?annotation11 .
_:448953 a rdf:Statement ;
up:attribution _:448933 ;
rdf:subject ?pfs10 ;
rdf:predicate up:annotation ;
rdf:object ?annotation11 .
_:448954 a rdf:Statement ;
up:source unirule:MF_01265 ;
rdf:subject ?pfs16 ;
rdf:predicate up:annotation ;
rdf:object ?annotation17 .
_:448955 a rdf:Statement ;
up:attribution _:448934 ;
rdf:subject ?pfs16 ;
rdf:predicate up:annotation ;
rdf:object ?annotation17 .
_:448956 a rdf:Statement ;
up:source unirule:MF_01265 ;
rdf:subject ?pfs23 ;
rdf:predicate up:annotation ;
rdf:object ?annotation24 .
_:448957 a rdf:Statement ;
up:attribution _:448935 ;
rdf:subject ?pfs23 ;
rdf:predicate up:annotation ;
rdf:object ?annotation24 .
}
WHERE {
#baseURI: http://purl.uniprot.org/unirule/MF_01265
#Rule MF_01265 Created by:? on:2005-07-29 Modified by:Catherine Rivoire on:2025-06-12
VALUES ?supertaxon30 {taxon:2 taxon:2157}
?this up:organism ?thisOrganism ;
rdfs:seeAlso signature:MF_01265 .
?thisOrganism rdfs:subClassOf+ ?supertaxon30 .
BIND(URI(CONCAT(STR(?this), '#MF_01265a0')) AS ?name0) .
BIND(URI(CONCAT(STR(?this), '#MF_01265a2')) AS ?annotation2) .
BIND(URI(CONCAT(STR(?this), '#MF_01265a3')) AS ?annotation3) .
BIND(URI(CONCAT(STR(?this), '#MF_01265a5')) AS ?annotation5) .
BIND(URI(CONCAT(STR(?this), '#MF_01265a7')) AS ?annotation7) .
BIND(URI(CONCAT(STR(?this), '#MF_01265a8')) AS ?annotation8) .
BIND(URI(CONCAT(STR(?this), '#MF_01265a9')) AS ?annotation9) .
OPTIONAL {
?this up:sequence ?thisSequence .
?thisSequence rdf:value ?thisSequenceValue .
?templateMotifMatch35 faldo:location ?templateMotifSequenceMatchRegionQ9X1X636 ;
edam:is_output_of ?templateMotifSequenceProfileAlignmentOperationQ9X1X638 ;
rdf:type edam:data_0869 ;
rdf:value ?templateMotifCigarQ9X1X6MF_0126531 .
?templateMotifSequenceMatchRegionQ9X1X636 faldo:begin ?templateMotifSequenceMatchBeginQ9X1X637 .
?templateMotifSequenceMatchBeginQ9X1X637 faldo:position ?templateMotifSequenceMatchBeginPositionQ9X1X632 ;
faldo:reference isoform:Q9X1X6-1 .
?templateMotifSequenceProfileAlignmentOperationQ9X1X638 edam:has_input signature:MF_01265 ;
rdf:type edam:operation_0300 .
?targetMotifMatch39 faldo:location ?targetMotifMatchRegionMatch40 ;
edam:is_output_of ?targetMotifSequenceAlignmentOperationMF_0126542 ;
rdf:type edam:data_0869 ;
rdf:value ?targetMotifMatchCigarQ9X1X6MF_0126533 .
?targetMotifMatchRegionMatch40 faldo:begin ?targetMotifMatchRegionMatchBeginMF_0126541 .
?targetMotifMatchRegionMatchBeginMF_0126541 faldo:position ?targetMotifMatchRegionMatchBeginPositionMF_0126534 ;
faldo:reference ?thisSequence .
?targetMotifSequenceAlignmentOperationMF_0126542 edam:has_input signature:MF_01265 ;
rdf:type edam:operation_0300 .
BIND(STRLEN(REPLACE(SUBSTR(?templateMotifCigarQ9X1X6MF_0126531, 1, (STRLEN(?templateMotifCigarQ9X1X6MF_0126531) - STRLEN(REPLACE(?templateMotifCigarQ9X1X6MF_0126531, CONCAT('^(?:-*[^-]){', STR(((193 - ?templateMotifSequenceMatchBeginPositionQ9X1X632) + 1)), '}'), '')))), '[a-z]', '')) AS ?step143) .
BIND((STRLEN(SUBSTR(?targetMotifMatchCigarQ9X1X6MF_0126533, 1, (STRLEN(?targetMotifMatchCigarQ9X1X6MF_0126533) - STRLEN(REPLACE(?targetMotifMatchCigarQ9X1X6MF_0126533, CONCAT('^(?:[a-z]*(?:[A-Z]|-)){', STR(?step143), '}'), ''))))) - STRLEN(REPLACE(SUBSTR(?targetMotifMatchCigarQ9X1X6MF_0126533, 1, (STRLEN(?targetMotifMatchCigarQ9X1X6MF_0126533) - STRLEN(REPLACE(?targetMotifMatchCigarQ9X1X6MF_0126533, CONCAT('^(?:[a-z]*(?:[A-Z]|-)){', STR(?step143), '}'), '')))), '[^-]', ''))) AS ?step244) .
BIND(((?step244 + ?targetMotifMatchRegionMatchBeginPositionMF_0126534) - 1) AS ?thisPositionOn14) .
BIND(?thisPositionOn14 AS ?thisPositionOn15) .
BIND(?this AS ?pfs1t45) .
BIND(URI(CONCAT(STR(?thisSequence), '#position', STR(?thisPositionOn14))) AS ?pfsb12) .
BIND(URI(CONCAT(STR(?thisSequence), '#position', STR(?thisPositionOn15))) AS ?pfse13) .
FILTER ((SUBSTR(?thisSequenceValue, ?thisPositionOn14, 1) = 'H')) .
BIND(URI(CONCAT(STR(?this), '#MF_01265a11')) AS ?annotation11) .
BIND(?this AS ?pfs10) .
}
OPTIONAL {
?this up:sequence ?thisSequence .
?thisSequence rdf:value ?thisSequenceValue .
?templateMotifMatch50 faldo:location ?templateMotifSequenceMatchRegionQ9X1X651 ;
edam:is_output_of ?templateMotifSequenceProfileAlignmentOperationQ9X1X653 ;
rdf:type edam:data_0869 ;
rdf:value ?templateMotifCigarQ9X1X6MF_0126546 .
?templateMotifSequenceMatchRegionQ9X1X651 faldo:begin ?templateMotifSequenceMatchBeginQ9X1X652 .
?templateMotifSequenceMatchBeginQ9X1X652 faldo:position ?templateMotifSequenceMatchBeginPositionQ9X1X647 ;
faldo:reference isoform:Q9X1X6-1 .
?templateMotifSequenceProfileAlignmentOperationQ9X1X653 edam:has_input signature:MF_01265 ;
rdf:type edam:operation_0300 .
?targetMotifMatch54 faldo:location ?targetMotifMatchRegionMatch55 ;
edam:is_output_of ?targetMotifSequenceAlignmentOperationMF_0126557 ;
rdf:type edam:data_0869 ;
rdf:value ?targetMotifMatchCigarQ9X1X6MF_0126548 .
?targetMotifMatchRegionMatch55 faldo:begin ?targetMotifMatchRegionMatchBeginMF_0126556 .
?targetMotifMatchRegionMatchBeginMF_0126556 faldo:position ?targetMotifMatchRegionMatchBeginPositionMF_0126549 ;
faldo:reference ?thisSequence .
?targetMotifSequenceAlignmentOperationMF_0126557 edam:has_input signature:MF_01265 ;
rdf:type edam:operation_0300 .
BIND(STRLEN(REPLACE(SUBSTR(?templateMotifCigarQ9X1X6MF_0126546, 1, (STRLEN(?templateMotifCigarQ9X1X6MF_0126546) - STRLEN(REPLACE(?templateMotifCigarQ9X1X6MF_0126546, CONCAT('^(?:-*[^-]){', STR(((109 - ?templateMotifSequenceMatchBeginPositionQ9X1X647) + 1)), '}'), '')))), '[a-z]', '')) AS ?step158) .
BIND((STRLEN(SUBSTR(?targetMotifMatchCigarQ9X1X6MF_0126548, 1, (STRLEN(?targetMotifMatchCigarQ9X1X6MF_0126548) - STRLEN(REPLACE(?targetMotifMatchCigarQ9X1X6MF_0126548, CONCAT('^(?:[a-z]*(?:[A-Z]|-)){', STR(?step158), '}'), ''))))) - STRLEN(REPLACE(SUBSTR(?targetMotifMatchCigarQ9X1X6MF_0126548, 1, (STRLEN(?targetMotifMatchCigarQ9X1X6MF_0126548) - STRLEN(REPLACE(?targetMotifMatchCigarQ9X1X6MF_0126548, CONCAT('^(?:[a-z]*(?:[A-Z]|-)){', STR(?step158), '}'), '')))), '[^-]', ''))) AS ?step259) .
BIND(((?step259 + ?targetMotifMatchRegionMatchBeginPositionMF_0126549) - 1) AS ?thisPositionOn21) .
BIND(?thisPositionOn21 AS ?thisPositionOn22) .
BIND(?this AS ?pfs1t60) .
BIND(URI(CONCAT(STR(?thisSequence), '#position', STR(?thisPositionOn21))) AS ?pfsb18) .
BIND(URI(CONCAT(STR(?thisSequence), '#position', STR(?thisPositionOn22))) AS ?pfse19) .
FILTER ((SUBSTR(?thisSequenceValue, ?thisPositionOn21, 1) = 'A')) .
BIND(URI(CONCAT(STR(?this), '#MF_01265a17')) AS ?annotation17) .
BIND(?this AS ?pfs16) .
}
OPTIONAL {
?this up:sequence ?thisSequence .
?thisSequence rdf:value ?thisSequenceValue .
?templateMotifMatch65 faldo:location ?templateMotifSequenceMatchRegionQ9X1X666 ;
edam:is_output_of ?templateMotifSequenceProfileAlignmentOperationQ9X1X668 ;
rdf:type edam:data_0869 ;
rdf:value ?templateMotifCigarQ9X1X6MF_0126561 .
?templateMotifSequenceMatchRegionQ9X1X666 faldo:begin ?templateMotifSequenceMatchBeginQ9X1X667 .
?templateMotifSequenceMatchBeginQ9X1X667 faldo:position ?templateMotifSequenceMatchBeginPositionQ9X1X662 ;
faldo:reference isoform:Q9X1X6-1 .
?templateMotifSequenceProfileAlignmentOperationQ9X1X668 edam:has_input signature:MF_01265 ;
rdf:type edam:operation_0300 .
?targetMotifMatch69 faldo:location ?targetMotifMatchRegionMatch70 ;
edam:is_output_of ?targetMotifSequenceAlignmentOperationMF_0126572 ;
rdf:type edam:data_0869 ;
rdf:value ?targetMotifMatchCigarQ9X1X6MF_0126563 .
?targetMotifMatchRegionMatch70 faldo:begin ?targetMotifMatchRegionMatchBeginMF_0126571 .
?targetMotifMatchRegionMatchBeginMF_0126571 faldo:position ?targetMotifMatchRegionMatchBeginPositionMF_0126564 ;
faldo:reference ?thisSequence .
?targetMotifSequenceAlignmentOperationMF_0126572 edam:has_input signature:MF_01265 ;
rdf:type edam:operation_0300 .
BIND(STRLEN(REPLACE(SUBSTR(?templateMotifCigarQ9X1X6MF_0126561, 1, (STRLEN(?templateMotifCigarQ9X1X6MF_0126561) - STRLEN(REPLACE(?templateMotifCigarQ9X1X6MF_0126561, CONCAT('^(?:-*[^-]){', STR(((164 - ?templateMotifSequenceMatchBeginPositionQ9X1X662) + 1)), '}'), '')))), '[a-z]', '')) AS ?step173) .
BIND((STRLEN(SUBSTR(?targetMotifMatchCigarQ9X1X6MF_0126563, 1, (STRLEN(?targetMotifMatchCigarQ9X1X6MF_0126563) - STRLEN(REPLACE(?targetMotifMatchCigarQ9X1X6MF_0126563, CONCAT('^(?:[a-z]*(?:[A-Z]|-)){', STR(?step173), '}'), ''))))) - STRLEN(REPLACE(SUBSTR(?targetMotifMatchCigarQ9X1X6MF_0126563, 1, (STRLEN(?targetMotifMatchCigarQ9X1X6MF_0126563) - STRLEN(REPLACE(?targetMotifMatchCigarQ9X1X6MF_0126563, CONCAT('^(?:[a-z]*(?:[A-Z]|-)){', STR(?step173), '}'), '')))), '[^-]', ''))) AS ?step274) .
BIND(((?step274 + ?targetMotifMatchRegionMatchBeginPositionMF_0126564) - 1) AS ?thisPositionOn28) .
BIND(?thisPositionOn28 AS ?thisPositionOn29) .
BIND(?this AS ?pfs1t75) .
BIND(URI(CONCAT(STR(?thisSequence), '#position', STR(?thisPositionOn28))) AS ?pfsb25) .
BIND(URI(CONCAT(STR(?thisSequence), '#position', STR(?thisPositionOn29))) AS ?pfse26) .
FILTER ((SUBSTR(?thisSequenceValue, ?thisPositionOn28, 1) = 'N')) .
BIND(URI(CONCAT(STR(?this), '#MF_01265a24')) AS ?annotation24) .
BIND(?this AS ?pfs23) .
}
}
"xsd:string |
