| http://purl.uniprot.org/unirules/MF_01512#construct | http://www.w3.org/ns/shacl#construct | "CONSTRUCT {
_:547703 up:source unirule:MF_01512 .
_:547704 up:source unirule:MF_01512 .
_:547705 up:source unirule:MF_01512 .
_:547706 up:source unirule:MF_01512 .
_:547707 up:source unirule:MF_01512 .
_:547708 up:source unirule:MF_01512 .
_:547709 up:source unirule:MF_01512 .
_:547710 up:source unirule:MF_01512 .
_:547711 up:source unirule:MF_01512 .
_:547712 up:source unirule:MF_01512 .
_:547713 up:source unirule:MF_01512 .
_:547714 up:source unirule:MF_01512 .
_:547715 up:source unirule:MF_01512 .
_:547716 up:source unirule:MF_01512 .
_:547717 up:source unirule:MF_01512 .
_:547718 up:source unirule:MF_01512 .
_:547719 up:source unirule:MF_01512 .
_:547720 up:source unirule:MF_01512 .
_:547721 up:source unirule:MF_01512 .
?this up:alternativeName ?name1 ;
up:annotation ?annotation3 ,
?annotation4 ,
?annotation5 ,
?annotation7 ;
up:classifiedWith GO:0005737 ,
GO:0016765 ,
GO:0046677 ,
keyword:46 ,
keyword:808 ,
keyword:963 ;
up:recommendedName ?name0 .
?name0 up:ecName '2.5.1.-' ;
up:fullName 'Metallothiol transferase FosB' ;
rdf:type up:Structured_Name .
?name1 up:fullName 'Fosfomycin resistance protein' ;
rdf:type up:Structured_Name .
?gene2 skos:prefLabel 'fosB' .
?annotation3 a up:Function_Annotation ;
rdfs:comment 'Metallothiol transferase which confers resistance to fosfomycin by catalyzing the addition of a thiol cofactor to fosfomycin. L-cysteine is probably the physiological thiol donor.' .
?annotation4 a up:Subunit_Annotation ;
rdfs:comment 'Homodimer.' .
?annotation5 a up:Subcellular_Location_Annotation .
?annotation5li6 up:cellularComponent .
?annotation7 a up:Similarity_Annotation ;
rdfs:comment 'Belongs to the fosfomycin resistance protein family. FosB subfamily.' .
?case8 up:classifiedWith GO:0000287 ,
keyword:460 ,
keyword:479 .
?pfs9 up:annotation ?annotation10 ,
?annotation16 ,
?annotation22 .
?annotation10 faldo:begin ?pfsb11 ;
faldo:end ?pfse12 ;
up:ligand ?ligand13 ;
rdf:type up:Binding_Site_Annotation .
?pfsb11 faldo:position ?thisPositionOn14 ;
rdf:type faldo:ExactPosition .
?pfse12 faldo:position ?thisPositionOn15 ;
rdf:type faldo:ExactPosition .
?ligand13 rdfs:subClassOf chebi:18420 .
?annotation16 faldo:begin ?pfsb17 ;
faldo:end ?pfse18 ;
up:ligand ?ligand19 ;
rdf:type up:Binding_Site_Annotation .
?pfsb17 faldo:position ?thisPositionOn20 ;
rdf:type faldo:ExactPosition .
?pfse18 faldo:position ?thisPositionOn21 ;
rdf:type faldo:ExactPosition .
?ligand19 rdfs:subClassOf chebi:18420 .
?annotation22 faldo:begin ?pfsb23 ;
faldo:end ?pfse24 ;
up:ligand ?ligand25 ;
rdf:type up:Binding_Site_Annotation .
?pfsb23 faldo:position ?thisPositionOn26 ;
rdf:type faldo:ExactPosition .
?pfse24 faldo:position ?thisPositionOn27 ;
rdf:type faldo:ExactPosition .
?ligand25 rdfs:subClassOf chebi:18420 .
_:547722 a rdf:Statement ;
up:attribution _:547703 ;
rdf:subject ?this ;
rdf:predicate up:recommendedName ;
rdf:object ?name0 .
_:547723 a rdf:Statement ;
up:attribution _:547704 ;
rdf:subject ?this ;
rdf:predicate up:alternativeName ;
rdf:object ?name1 .
_:547724 a rdf:Statement ;
up:attribution _:547705 ;
rdf:subject ?gene2 ;
rdf:predicate up:encodedBy ;
rdf:object ?gene2 .
_:547725 a rdf:Statement ;
up:attribution _:547706 ;
rdf:subject ?this ;
rdf:predicate up:annotation ;
rdf:object ?annotation3 .
_:547726 a rdf:Statement ;
up:attribution _:547707 ;
rdf:subject ?this ;
rdf:predicate up:annotation ;
rdf:object ?annotation4 .
_:547727 a rdf:Statement ;
up:attribution _:547708 ;
rdf:subject ?this ;
rdf:predicate up:annotation ;
rdf:object ?annotation5 .
_:547728 a rdf:Statement ;
up:attribution _:547709 ;
rdf:subject ?this ;
rdf:predicate up:annotation ;
rdf:object ?annotation7 .
_:547729 a rdf:Statement ;
up:attribution _:547710 ;
rdf:subject ?this ;
rdf:predicate up:classifiedWith ;
rdf:object keyword:963 .
_:547730 a rdf:Statement ;
up:attribution _:547711 ;
rdf:subject ?this ;
rdf:predicate up:classifiedWith ;
rdf:object keyword:808 .
_:547731 a rdf:Statement ;
up:attribution _:547712 ;
rdf:subject ?this ;
rdf:predicate up:classifiedWith ;
rdf:object keyword:46 .
_:547732 a rdf:Statement ;
up:attribution _:547713 ;
rdf:subject ?this ;
rdf:predicate up:classifiedWith ;
rdf:object GO:0016765 .
_:547733 a rdf:Statement ;
up:attribution _:547714 ;
rdf:subject ?this ;
rdf:predicate up:classifiedWith ;
rdf:object GO:0046677 .
_:547734 a rdf:Statement ;
up:attribution _:547715 ;
rdf:subject ?this ;
rdf:predicate up:classifiedWith ;
rdf:object GO:0005737 .
_:547735 a rdf:Statement ;
up:attribution _:547716 ;
rdf:subject ?case8 ;
rdf:predicate up:classifiedWith ;
rdf:object keyword:460 .
_:547736 a rdf:Statement ;
up:attribution _:547717 ;
rdf:subject ?case8 ;
rdf:predicate up:classifiedWith ;
rdf:object keyword:479 .
_:547737 a rdf:Statement ;
up:attribution _:547718 ;
rdf:subject ?case8 ;
rdf:predicate up:classifiedWith ;
rdf:object GO:0000287 .
_:547738 a rdf:Statement ;
up:source unirule:MF_01512 ;
rdf:subject ?pfs9 ;
rdf:predicate up:annotation ;
rdf:object ?annotation10 .
_:547739 a rdf:Statement ;
up:attribution _:547719 ;
rdf:subject ?pfs9 ;
rdf:predicate up:annotation ;
rdf:object ?annotation10 .
_:547740 a rdf:Statement ;
up:source unirule:MF_01512 ;
rdf:subject ?pfs9 ;
rdf:predicate up:annotation ;
rdf:object ?annotation16 .
_:547741 a rdf:Statement ;
up:attribution _:547720 ;
rdf:subject ?pfs9 ;
rdf:predicate up:annotation ;
rdf:object ?annotation16 .
_:547742 a rdf:Statement ;
up:source unirule:MF_01512 ;
rdf:subject ?pfs9 ;
rdf:predicate up:annotation ;
rdf:object ?annotation22 .
_:547743 a rdf:Statement ;
up:attribution _:547721 ;
rdf:subject ?pfs9 ;
rdf:predicate up:annotation ;
rdf:object ?annotation22 .
}
WHERE {
#baseURI: http://purl.uniprot.org/unirule/MF_01512
#Rule MF_01512 Created by:? on:2005-02-28 Modified by:Edouard de Castro on:2022-11-19
?this up:organism ?thisOrganism ;
rdfs:seeAlso signature:MF_01512 .
?thisOrganism rdfs:subClassOf+ taxon:1385 .
BIND(URI(CONCAT(STR(?this), '#MF_01512a0')) AS ?name0) .
BIND(URI(CONCAT(STR(?this), '#MF_01512a1')) AS ?name1) .
BIND(URI(CONCAT(STR(?this), '#MF_01512a3')) AS ?annotation3) .
BIND(URI(CONCAT(STR(?this), '#MF_01512a4')) AS ?annotation4) .
BIND(URI(CONCAT(STR(?this), '#MF_01512a5')) AS ?annotation5) .
BIND(URI(CONCAT(STR(?this), '#MF_01512a7')) AS ?annotation7) .
OPTIONAL {
?this up:sequence ?thisSequence .
?thisSequence rdf:value ?thisSequenceValue .
?templateMotifMatch32 faldo:location ?templateMotifSequenceMatchRegionO3181733 ;
edam:is_output_of ?templateMotifSequenceProfileAlignmentOperationO3181735 ;
rdf:type edam:data_0869 ;
rdf:value ?templateMotifCigarO31817MF_0151228 .
?templateMotifSequenceMatchRegionO3181733 faldo:begin ?templateMotifSequenceMatchBeginO3181734 .
?templateMotifSequenceMatchBeginO3181734 faldo:position ?templateMotifSequenceMatchBeginPositionO3181729 ;
faldo:reference isoform:O31817-1 .
?templateMotifSequenceProfileAlignmentOperationO3181735 edam:has_input signature:MF_01512 ;
rdf:type edam:operation_0300 .
?targetMotifMatch36 faldo:location ?targetMotifMatchRegionMatch37 ;
edam:is_output_of ?targetMotifSequenceAlignmentOperationMF_0151239 ;
rdf:type edam:data_0869 ;
rdf:value ?targetMotifMatchCigarO31817MF_0151230 .
?targetMotifMatchRegionMatch37 faldo:begin ?targetMotifMatchRegionMatchBeginMF_0151238 .
?targetMotifMatchRegionMatchBeginMF_0151238 faldo:position ?targetMotifMatchRegionMatchBeginPositionMF_0151231 ;
faldo:reference ?thisSequence .
?targetMotifSequenceAlignmentOperationMF_0151239 edam:has_input signature:MF_01512 ;
rdf:type edam:operation_0300 .
BIND(?this AS ?tagFTGRP_1) .
BIND(STRLEN(REPLACE(SUBSTR(?templateMotifCigarO31817MF_0151228, 1, (STRLEN(?templateMotifCigarO31817MF_0151228) - STRLEN(REPLACE(?templateMotifCigarO31817MF_0151228, CONCAT('^(?:-*[^-]){', STR(((8 - ?templateMotifSequenceMatchBeginPositionO3181729) + 1)), '}'), '')))), '[a-z]', '')) AS ?step140) .
BIND((STRLEN(SUBSTR(?targetMotifMatchCigarO31817MF_0151230, 1, (STRLEN(?targetMotifMatchCigarO31817MF_0151230) - STRLEN(REPLACE(?targetMotifMatchCigarO31817MF_0151230, CONCAT('^(?:[a-z]*(?:[A-Z]|-)){', STR(?step140), '}'), ''))))) - STRLEN(REPLACE(SUBSTR(?targetMotifMatchCigarO31817MF_0151230, 1, (STRLEN(?targetMotifMatchCigarO31817MF_0151230) - STRLEN(REPLACE(?targetMotifMatchCigarO31817MF_0151230, CONCAT('^(?:[a-z]*(?:[A-Z]|-)){', STR(?step140), '}'), '')))), '[^-]', ''))) AS ?step241) .
BIND(((?step241 + ?targetMotifMatchRegionMatchBeginPositionMF_0151231) - 1) AS ?thisPositionOn14) .
BIND(?thisPositionOn14 AS ?thisPositionOn15) .
BIND(?this AS ?pfs1t42) .
BIND(URI(CONCAT(STR(?thisSequence), '#position', STR(?thisPositionOn14))) AS ?pfsb11) .
BIND(URI(CONCAT(STR(?thisSequence), '#position', STR(?thisPositionOn15))) AS ?pfse12) .
FILTER ((SUBSTR(?thisSequenceValue, ?thisPositionOn14, 1) = 'H')) .
BIND(STRLEN(REPLACE(SUBSTR(?templateMotifCigarO31817MF_0151228, 1, (STRLEN(?templateMotifCigarO31817MF_0151228) - STRLEN(REPLACE(?templateMotifCigarO31817MF_0151228, CONCAT('^(?:-*[^-]){', STR(((67 - ?templateMotifSequenceMatchBeginPositionO3181729) + 1)), '}'), '')))), '[a-z]', '')) AS ?step143) .
BIND((STRLEN(SUBSTR(?targetMotifMatchCigarO31817MF_0151230, 1, (STRLEN(?targetMotifMatchCigarO31817MF_0151230) - STRLEN(REPLACE(?targetMotifMatchCigarO31817MF_0151230, CONCAT('^(?:[a-z]*(?:[A-Z]|-)){', STR(?step143), '}'), ''))))) - STRLEN(REPLACE(SUBSTR(?targetMotifMatchCigarO31817MF_0151230, 1, (STRLEN(?targetMotifMatchCigarO31817MF_0151230) - STRLEN(REPLACE(?targetMotifMatchCigarO31817MF_0151230, CONCAT('^(?:[a-z]*(?:[A-Z]|-)){', STR(?step143), '}'), '')))), '[^-]', ''))) AS ?step244) .
BIND(((?step244 + ?targetMotifMatchRegionMatchBeginPositionMF_0151231) - 1) AS ?thisPositionOn20) .
BIND(?thisPositionOn20 AS ?thisPositionOn21) .
BIND(?this AS ?pfs1t45) .
BIND(URI(CONCAT(STR(?thisSequence), '#position', STR(?thisPositionOn20))) AS ?pfsb17) .
BIND(URI(CONCAT(STR(?thisSequence), '#position', STR(?thisPositionOn21))) AS ?pfse18) .
FILTER ((SUBSTR(?thisSequenceValue, ?thisPositionOn20, 1) = 'H')) .
BIND(STRLEN(REPLACE(SUBSTR(?templateMotifCigarO31817MF_0151228, 1, (STRLEN(?templateMotifCigarO31817MF_0151228) - STRLEN(REPLACE(?templateMotifCigarO31817MF_0151228, CONCAT('^(?:-*[^-]){', STR(((116 - ?templateMotifSequenceMatchBeginPositionO3181729) + 1)), '}'), '')))), '[a-z]', '')) AS ?step146) .
BIND((STRLEN(SUBSTR(?targetMotifMatchCigarO31817MF_0151230, 1, (STRLEN(?targetMotifMatchCigarO31817MF_0151230) - STRLEN(REPLACE(?targetMotifMatchCigarO31817MF_0151230, CONCAT('^(?:[a-z]*(?:[A-Z]|-)){', STR(?step146), '}'), ''))))) - STRLEN(REPLACE(SUBSTR(?targetMotifMatchCigarO31817MF_0151230, 1, (STRLEN(?targetMotifMatchCigarO31817MF_0151230) - STRLEN(REPLACE(?targetMotifMatchCigarO31817MF_0151230, CONCAT('^(?:[a-z]*(?:[A-Z]|-)){', STR(?step146), '}'), '')))), '[^-]', ''))) AS ?step247) .
BIND(((?step247 + ?targetMotifMatchRegionMatchBeginPositionMF_0151231) - 1) AS ?thisPositionOn26) .
BIND(?thisPositionOn26 AS ?thisPositionOn27) .
BIND(?this AS ?pfs1t48) .
BIND(URI(CONCAT(STR(?thisSequence), '#position', STR(?thisPositionOn26))) AS ?pfsb23) .
BIND(URI(CONCAT(STR(?thisSequence), '#position', STR(?thisPositionOn27))) AS ?pfse24) .
FILTER ((SUBSTR(?thisSequenceValue, ?thisPositionOn26, 1) = 'E')) .
BIND(?this AS ?pfs9) .
}
OPTIONAL {
?this a up:Protein .
BIND(?this AS ?caseWithTag49) .
}
BIND(IF(BOUND(?tagFTGRP_1), ?caseWithTag49, ?UNBOUND_VARIABLE) AS ?case8) .
}
"xsd:string |
