| http://purl.uniprot.org/unirules/MF_01675#construct | http://www.w3.org/ns/shacl#construct | "CONSTRUCT {
_:611416 up:source unirule:MF_01675 .
_:611417 up:source unirule:MF_01675 .
_:611418 up:source unirule:MF_01675 .
_:611419 up:source unirule:MF_01675 .
_:611420 up:source unirule:MF_01675 .
_:611421 up:source unirule:MF_01675 .
_:611422 up:source unirule:MF_01675 .
_:611423 up:source unirule:MF_01675 .
_:611424 up:source unirule:MF_01675 .
_:611425 up:source unirule:MF_01675 .
_:611426 up:source unirule:MF_01675 .
_:611427 up:source unirule:MF_01675 .
_:611428 up:source unirule:MF_01675 .
_:611429 up:source unirule:MF_01675 .
_:611430 up:source unirule:MF_01675 .
?this up:alternativeName ?name1 ;
up:annotation ?annotation2 ,
?annotation3 ,
?annotation5 ,
?annotation6 ,
?annotation7 ;
up:classifiedWith GO:0043766 ,
keyword:648 ,
keyword:663 ,
keyword:808 ;
up:recommendedName ?name0 .
?name0 up:ecName '2.5.1.73' ;
up:fullName 'O-phospho-L-seryl-tRNA:Cys-tRNA synthase' ;
rdf:type up:Structured_Name .
?name1 up:fullName 'Sep-tRNA:Cys-tRNA synthase' ;
up:shortName 'SepCysS' ;
rdf:type up:Structured_Name .
?annotation2 a up:Function_Annotation ;
rdfs:comment 'Converts O-phospho-L-seryl-tRNA(Cys) (Sep-tRNA(Cys)) to L-cysteinyl-tRNA(Cys) (Cys-tRNA(Cys)).' .
?annotation3 up:activity ?activity4 ;
rdf:type up:Catalytic_Activity_Annotation .
?activity4 up:catalyticActivity ;
up:enzymeClass .
?annotation5 up:cofactor chebi:597326 ;
rdf:type up:Cofactor_Annotation .
?annotation6 a up:Subunit_Annotation ;
rdfs:comment 'Homodimer. Interacts with SepRS.' .
?annotation7 a up:Similarity_Annotation ;
rdfs:comment 'Belongs to the SepCysS family.' .
?pfs8 up:annotation ?annotation9 .
?annotation9 faldo:begin ?pfsb10 ;
faldo:end ?pfse11 ;
up:ligand ?ligand12 ;
rdf:type up:Binding_Site_Annotation .
?pfsb10 faldo:position ?thisPositionOn13 ;
rdf:type faldo:ExactPosition .
?pfse11 faldo:position ?thisPositionOn14 ;
rdf:type faldo:ExactPosition .
?ligand12 rdfs:subClassOf chebi:597326 .
?pfs15 up:annotation ?annotation16 .
?annotation16 faldo:begin ?pfsb17 ;
faldo:end ?pfse18 ;
up:ligand ?ligand19 ;
rdf:type up:Binding_Site_Annotation .
?pfsb17 faldo:position ?thisPositionOn20 ;
rdf:type faldo:ExactPosition .
?pfse18 faldo:position ?thisPositionOn21 ;
rdf:type faldo:ExactPosition .
?ligand19 rdfs:subClassOf chebi:597326 .
?pfs22 up:annotation ?annotation23 .
?annotation23 faldo:begin ?pfsb24 ;
faldo:end ?pfse25 ;
up:ligand ?ligand26 ;
rdf:type up:Binding_Site_Annotation .
?pfsb24 faldo:position ?thisPositionOn27 ;
rdf:type faldo:ExactPosition .
?pfse25 faldo:position ?thisPositionOn28 ;
rdf:type faldo:ExactPosition .
?ligand26 rdfs:subClassOf chebi:597326 .
?pfs29 up:annotation ?annotation30 .
?annotation30 faldo:begin ?pfsb31 ;
faldo:end ?pfse32 ;
rdf:type up:Modified_Residue_Annotation ;
rdfs:comment 'N6-(pyridoxal phosphate)lysine' .
?pfsb31 faldo:position ?thisPositionOn33 ;
rdf:type faldo:ExactPosition .
?pfse32 faldo:position ?thisPositionOn34 ;
rdf:type faldo:ExactPosition .
_:611431 a rdf:Statement ;
up:attribution _:611416 ;
rdf:subject ?this ;
rdf:predicate up:recommendedName ;
rdf:object ?name0 .
_:611432 a rdf:Statement ;
up:attribution _:611417 ;
rdf:subject ?this ;
rdf:predicate up:alternativeName ;
rdf:object ?name1 .
_:611433 a rdf:Statement ;
up:attribution _:611418 ;
rdf:subject ?this ;
rdf:predicate up:annotation ;
rdf:object ?annotation2 .
_:611434 a rdf:Statement ;
up:attribution _:611419 ;
rdf:subject ?this ;
rdf:predicate up:annotation ;
rdf:object ?annotation3 .
_:611435 a rdf:Statement ;
up:attribution _:611420 ;
rdf:subject ?this ;
rdf:predicate up:annotation ;
rdf:object ?annotation5 .
_:611436 a rdf:Statement ;
up:attribution _:611421 ;
rdf:subject ?this ;
rdf:predicate up:annotation ;
rdf:object ?annotation6 .
_:611437 a rdf:Statement ;
up:attribution _:611422 ;
rdf:subject ?this ;
rdf:predicate up:annotation ;
rdf:object ?annotation7 .
_:611438 a rdf:Statement ;
up:attribution _:611423 ;
rdf:subject ?this ;
rdf:predicate up:classifiedWith ;
rdf:object keyword:648 .
_:611439 a rdf:Statement ;
up:attribution _:611424 ;
rdf:subject ?this ;
rdf:predicate up:classifiedWith ;
rdf:object keyword:663 .
_:611440 a rdf:Statement ;
up:attribution _:611425 ;
rdf:subject ?this ;
rdf:predicate up:classifiedWith ;
rdf:object keyword:808 .
_:611441 a rdf:Statement ;
up:attribution _:611426 ;
rdf:subject ?this ;
rdf:predicate up:classifiedWith ;
rdf:object GO:0043766 .
_:611442 a rdf:Statement ;
up:source unirule:MF_01675 ;
rdf:subject ?pfs8 ;
rdf:predicate up:annotation ;
rdf:object ?annotation9 .
_:611443 a rdf:Statement ;
up:attribution _:611427 ;
rdf:subject ?pfs8 ;
rdf:predicate up:annotation ;
rdf:object ?annotation9 .
_:611444 a rdf:Statement ;
up:source unirule:MF_01675 ;
rdf:subject ?pfs15 ;
rdf:predicate up:annotation ;
rdf:object ?annotation16 .
_:611445 a rdf:Statement ;
up:attribution _:611428 ;
rdf:subject ?pfs15 ;
rdf:predicate up:annotation ;
rdf:object ?annotation16 .
_:611446 a rdf:Statement ;
up:source unirule:MF_01675 ;
rdf:subject ?pfs22 ;
rdf:predicate up:annotation ;
rdf:object ?annotation23 .
_:611447 a rdf:Statement ;
up:attribution _:611429 ;
rdf:subject ?pfs22 ;
rdf:predicate up:annotation ;
rdf:object ?annotation23 .
_:611448 a rdf:Statement ;
up:source unirule:MF_01675 ;
rdf:subject ?pfs29 ;
rdf:predicate up:annotation ;
rdf:object ?annotation30 .
_:611449 a rdf:Statement ;
up:attribution _:611430 ;
rdf:subject ?pfs29 ;
rdf:predicate up:annotation ;
rdf:object ?annotation30 .
}
WHERE {
#baseURI: http://purl.uniprot.org/unirule/MF_01675
#Rule MF_01675 Created by:? on:2008-10-07 Modified by:Edouard de Castro on:2024-09-03
?this up:organism ?thisOrganism ;
rdfs:seeAlso signature:MF_01675 .
?thisOrganism rdfs:subClassOf+ taxon:2157 .
BIND(URI(CONCAT(STR(?this), '#MF_01675a0')) AS ?name0) .
BIND(URI(CONCAT(STR(?this), '#MF_01675a1')) AS ?name1) .
BIND(URI(CONCAT(STR(?this), '#MF_01675a2')) AS ?annotation2) .
BIND(URI(CONCAT(STR(?this), '#MF_01675a3')) AS ?annotation3) .
BIND(URI(CONCAT(STR(?this), '#MF_01675a5')) AS ?annotation5) .
BIND(URI(CONCAT(STR(?this), '#MF_01675a6')) AS ?annotation6) .
BIND(URI(CONCAT(STR(?this), '#MF_01675a7')) AS ?annotation7) .
OPTIONAL {
?this up:sequence ?thisSequence .
?thisSequence rdf:value ?thisSequenceValue .
?templateMotifMatch39 faldo:location ?templateMotifSequenceMatchRegionO3020740 ;
edam:is_output_of ?templateMotifSequenceProfileAlignmentOperationO3020742 ;
rdf:type edam:data_0869 ;
rdf:value ?templateMotifCigarO30207MF_0167535 .
?templateMotifSequenceMatchRegionO3020740 faldo:begin ?templateMotifSequenceMatchBeginO3020741 .
?templateMotifSequenceMatchBeginO3020741 faldo:position ?templateMotifSequenceMatchBeginPositionO3020736 ;
faldo:reference isoform:O30207-1 .
?templateMotifSequenceProfileAlignmentOperationO3020742 edam:has_input signature:MF_01675 ;
rdf:type edam:operation_0300 .
?targetMotifMatch43 faldo:location ?targetMotifMatchRegionMatch44 ;
edam:is_output_of ?targetMotifSequenceAlignmentOperationMF_0167546 ;
rdf:type edam:data_0869 ;
rdf:value ?targetMotifMatchCigarO30207MF_0167537 .
?targetMotifMatchRegionMatch44 faldo:begin ?targetMotifMatchRegionMatchBeginMF_0167545 .
?targetMotifMatchRegionMatchBeginMF_0167545 faldo:position ?targetMotifMatchRegionMatchBeginPositionMF_0167538 ;
faldo:reference ?thisSequence .
?targetMotifSequenceAlignmentOperationMF_0167546 edam:has_input signature:MF_01675 ;
rdf:type edam:operation_0300 .
BIND(STRLEN(REPLACE(SUBSTR(?templateMotifCigarO30207MF_0167535, 1, (STRLEN(?templateMotifCigarO30207MF_0167535) - STRLEN(REPLACE(?templateMotifCigarO30207MF_0167535, CONCAT('^(?:-*[^-]){', STR(((78 - ?templateMotifSequenceMatchBeginPositionO3020736) + 1)), '}'), '')))), '[a-z]', '')) AS ?step147) .
BIND((STRLEN(SUBSTR(?targetMotifMatchCigarO30207MF_0167537, 1, (STRLEN(?targetMotifMatchCigarO30207MF_0167537) - STRLEN(REPLACE(?targetMotifMatchCigarO30207MF_0167537, CONCAT('^(?:[a-z]*(?:[A-Z]|-)){', STR(?step147), '}'), ''))))) - STRLEN(REPLACE(SUBSTR(?targetMotifMatchCigarO30207MF_0167537, 1, (STRLEN(?targetMotifMatchCigarO30207MF_0167537) - STRLEN(REPLACE(?targetMotifMatchCigarO30207MF_0167537, CONCAT('^(?:[a-z]*(?:[A-Z]|-)){', STR(?step147), '}'), '')))), '[^-]', ''))) AS ?step248) .
BIND(((?step248 + ?targetMotifMatchRegionMatchBeginPositionMF_0167538) - 1) AS ?thisPositionOn13) .
BIND(STRLEN(REPLACE(SUBSTR(?templateMotifCigarO30207MF_0167535, 1, (STRLEN(?templateMotifCigarO30207MF_0167535) - STRLEN(REPLACE(?templateMotifCigarO30207MF_0167535, CONCAT('^(?:-*[^-]){', STR(((79 - ?templateMotifSequenceMatchBeginPositionO3020736) + 1)), '}'), '')))), '[a-z]', '')) AS ?step149) .
BIND((STRLEN(SUBSTR(?targetMotifMatchCigarO30207MF_0167537, 1, (STRLEN(?targetMotifMatchCigarO30207MF_0167537) - STRLEN(REPLACE(?targetMotifMatchCigarO30207MF_0167537, CONCAT('^(?:[a-z]*(?:[A-Z]|-)){', STR(?step149), '}'), ''))))) - STRLEN(REPLACE(SUBSTR(?targetMotifMatchCigarO30207MF_0167537, 1, (STRLEN(?targetMotifMatchCigarO30207MF_0167537) - STRLEN(REPLACE(?targetMotifMatchCigarO30207MF_0167537, CONCAT('^(?:[a-z]*(?:[A-Z]|-)){', STR(?step149), '}'), '')))), '[^-]', ''))) AS ?step250) .
BIND(((?step250 + ?targetMotifMatchRegionMatchBeginPositionMF_0167538) - 1) AS ?thisPositionOn14) .
BIND(?this AS ?pfs1t51) .
BIND(URI(CONCAT(STR(?thisSequence), '#position', STR(?thisPositionOn13))) AS ?pfsb10) .
BIND(URI(CONCAT(STR(?thisSequence), '#position', STR(?thisPositionOn14))) AS ?pfse11) .
FILTER ((SUBSTR(?thisSequenceValue, ?thisPositionOn13, (?thisPositionOn14 - ?thisPositionOn13)) = 'AR')) .
BIND(URI(CONCAT(STR(?this), '#MF_01675a9')) AS ?annotation9) .
BIND(?this AS ?pfs8) .
}
OPTIONAL {
?this up:sequence ?thisSequence .
?thisSequence rdf:value ?thisSequenceValue .
?templateMotifMatch56 faldo:location ?templateMotifSequenceMatchRegionO3020757 ;
edam:is_output_of ?templateMotifSequenceProfileAlignmentOperationO3020759 ;
rdf:type edam:data_0869 ;
rdf:value ?templateMotifCigarO30207MF_0167552 .
?templateMotifSequenceMatchRegionO3020757 faldo:begin ?templateMotifSequenceMatchBeginO3020758 .
?templateMotifSequenceMatchBeginO3020758 faldo:position ?templateMotifSequenceMatchBeginPositionO3020753 ;
faldo:reference isoform:O30207-1 .
?templateMotifSequenceProfileAlignmentOperationO3020759 edam:has_input signature:MF_01675 ;
rdf:type edam:operation_0300 .
?targetMotifMatch60 faldo:location ?targetMotifMatchRegionMatch61 ;
edam:is_output_of ?targetMotifSequenceAlignmentOperationMF_0167563 ;
rdf:type edam:data_0869 ;
rdf:value ?targetMotifMatchCigarO30207MF_0167554 .
?targetMotifMatchRegionMatch61 faldo:begin ?targetMotifMatchRegionMatchBeginMF_0167562 .
?targetMotifMatchRegionMatchBeginMF_0167562 faldo:position ?targetMotifMatchRegionMatchBeginPositionMF_0167555 ;
faldo:reference ?thisSequence .
?targetMotifSequenceAlignmentOperationMF_0167563 edam:has_input signature:MF_01675 ;
rdf:type edam:operation_0300 .
BIND(STRLEN(REPLACE(SUBSTR(?templateMotifCigarO30207MF_0167552, 1, (STRLEN(?templateMotifCigarO30207MF_0167552) - STRLEN(REPLACE(?templateMotifCigarO30207MF_0167552, CONCAT('^(?:-*[^-]){', STR(((206 - ?templateMotifSequenceMatchBeginPositionO3020753) + 1)), '}'), '')))), '[a-z]', '')) AS ?step164) .
BIND((STRLEN(SUBSTR(?targetMotifMatchCigarO30207MF_0167554, 1, (STRLEN(?targetMotifMatchCigarO30207MF_0167554) - STRLEN(REPLACE(?targetMotifMatchCigarO30207MF_0167554, CONCAT('^(?:[a-z]*(?:[A-Z]|-)){', STR(?step164), '}'), ''))))) - STRLEN(REPLACE(SUBSTR(?targetMotifMatchCigarO30207MF_0167554, 1, (STRLEN(?targetMotifMatchCigarO30207MF_0167554) - STRLEN(REPLACE(?targetMotifMatchCigarO30207MF_0167554, CONCAT('^(?:[a-z]*(?:[A-Z]|-)){', STR(?step164), '}'), '')))), '[^-]', ''))) AS ?step265) .
BIND(((?step265 + ?targetMotifMatchRegionMatchBeginPositionMF_0167555) - 1) AS ?thisPositionOn20) .
BIND(STRLEN(REPLACE(SUBSTR(?templateMotifCigarO30207MF_0167552, 1, (STRLEN(?templateMotifCigarO30207MF_0167552) - STRLEN(REPLACE(?templateMotifCigarO30207MF_0167552, CONCAT('^(?:-*[^-]){', STR(((208 - ?templateMotifSequenceMatchBeginPositionO3020753) + 1)), '}'), '')))), '[a-z]', '')) AS ?step166) .
BIND((STRLEN(SUBSTR(?targetMotifMatchCigarO30207MF_0167554, 1, (STRLEN(?targetMotifMatchCigarO30207MF_0167554) - STRLEN(REPLACE(?targetMotifMatchCigarO30207MF_0167554, CONCAT('^(?:[a-z]*(?:[A-Z]|-)){', STR(?step166), '}'), ''))))) - STRLEN(REPLACE(SUBSTR(?targetMotifMatchCigarO30207MF_0167554, 1, (STRLEN(?targetMotifMatchCigarO30207MF_0167554) - STRLEN(REPLACE(?targetMotifMatchCigarO30207MF_0167554, CONCAT('^(?:[a-z]*(?:[A-Z]|-)){', STR(?step166), '}'), '')))), '[^-]', ''))) AS ?step267) .
BIND(((?step267 + ?targetMotifMatchRegionMatchBeginPositionMF_0167555) - 1) AS ?thisPositionOn21) .
BIND(?this AS ?pfs1t68) .
BIND(URI(CONCAT(STR(?thisSequence), '#position', STR(?thisPositionOn20))) AS ?pfsb17) .
BIND(URI(CONCAT(STR(?thisSequence), '#position', STR(?thisPositionOn21))) AS ?pfse18) .
FILTER ((SUBSTR(?thisSequenceValue, ?thisPositionOn20, (?thisPositionOn21 - ?thisPositionOn20)) = 'SGH')) .
BIND(URI(CONCAT(STR(?this), '#MF_01675a16')) AS ?annotation16) .
BIND(?this AS ?pfs15) .
}
OPTIONAL {
?this up:sequence ?thisSequence .
?thisSequence rdf:value ?thisSequenceValue .
?templateMotifMatch73 faldo:location ?templateMotifSequenceMatchRegionO3020774 ;
edam:is_output_of ?templateMotifSequenceProfileAlignmentOperationO3020776 ;
rdf:type edam:data_0869 ;
rdf:value ?templateMotifCigarO30207MF_0167569 .
?templateMotifSequenceMatchRegionO3020774 faldo:begin ?templateMotifSequenceMatchBeginO3020775 .
?templateMotifSequenceMatchBeginO3020775 faldo:position ?templateMotifSequenceMatchBeginPositionO3020770 ;
faldo:reference isoform:O30207-1 .
?templateMotifSequenceProfileAlignmentOperationO3020776 edam:has_input signature:MF_01675 ;
rdf:type edam:operation_0300 .
?targetMotifMatch77 faldo:location ?targetMotifMatchRegionMatch78 ;
edam:is_output_of ?targetMotifSequenceAlignmentOperationMF_0167580 ;
rdf:type edam:data_0869 ;
rdf:value ?targetMotifMatchCigarO30207MF_0167571 .
?targetMotifMatchRegionMatch78 faldo:begin ?targetMotifMatchRegionMatchBeginMF_0167579 .
?targetMotifMatchRegionMatchBeginMF_0167579 faldo:position ?targetMotifMatchRegionMatchBeginPositionMF_0167572 ;
faldo:reference ?thisSequence .
?targetMotifSequenceAlignmentOperationMF_0167580 edam:has_input signature:MF_01675 ;
rdf:type edam:operation_0300 .
BIND(STRLEN(REPLACE(SUBSTR(?templateMotifCigarO30207MF_0167569, 1, (STRLEN(?templateMotifCigarO30207MF_0167569) - STRLEN(REPLACE(?templateMotifCigarO30207MF_0167569, CONCAT('^(?:-*[^-]){', STR(((183 - ?templateMotifSequenceMatchBeginPositionO3020770) + 1)), '}'), '')))), '[a-z]', '')) AS ?step181) .
BIND((STRLEN(SUBSTR(?targetMotifMatchCigarO30207MF_0167571, 1, (STRLEN(?targetMotifMatchCigarO30207MF_0167571) - STRLEN(REPLACE(?targetMotifMatchCigarO30207MF_0167571, CONCAT('^(?:[a-z]*(?:[A-Z]|-)){', STR(?step181), '}'), ''))))) - STRLEN(REPLACE(SUBSTR(?targetMotifMatchCigarO30207MF_0167571, 1, (STRLEN(?targetMotifMatchCigarO30207MF_0167571) - STRLEN(REPLACE(?targetMotifMatchCigarO30207MF_0167571, CONCAT('^(?:[a-z]*(?:[A-Z]|-)){', STR(?step181), '}'), '')))), '[^-]', ''))) AS ?step282) .
BIND(((?step282 + ?targetMotifMatchRegionMatchBeginPositionMF_0167572) - 1) AS ?thisPositionOn27) .
BIND(?thisPositionOn27 AS ?thisPositionOn28) .
BIND(?this AS ?pfs1t83) .
BIND(URI(CONCAT(STR(?thisSequence), '#position', STR(?thisPositionOn27))) AS ?pfsb24) .
BIND(URI(CONCAT(STR(?thisSequence), '#position', STR(?thisPositionOn28))) AS ?pfse25) .
FILTER ((SUBSTR(?thisSequenceValue, ?thisPositionOn27, 1) = 'N')) .
BIND(URI(CONCAT(STR(?this), '#MF_01675a23')) AS ?annotation23) .
BIND(?this AS ?pfs22) .
}
OPTIONAL {
?this up:sequence ?thisSequence .
?thisSequence rdf:value ?thisSequenceValue .
?templateMotifMatch88 faldo:location ?templateMotifSequenceMatchRegionO3020789 ;
edam:is_output_of ?templateMotifSequenceProfileAlignmentOperationO3020791 ;
rdf:type edam:data_0869 ;
rdf:value ?templateMotifCigarO30207MF_0167584 .
?templateMotifSequenceMatchRegionO3020789 faldo:begin ?templateMotifSequenceMatchBeginO3020790 .
?templateMotifSequenceMatchBeginO3020790 faldo:position ?templateMotifSequenceMatchBeginPositionO3020785 ;
faldo:reference isoform:O30207-1 .
?templateMotifSequenceProfileAlignmentOperationO3020791 edam:has_input signature:MF_01675 ;
rdf:type edam:operation_0300 .
?targetMotifMatch92 faldo:location ?targetMotifMatchRegionMatch93 ;
edam:is_output_of ?targetMotifSequenceAlignmentOperationMF_0167595 ;
rdf:type edam:data_0869 ;
rdf:value ?targetMotifMatchCigarO30207MF_0167586 .
?targetMotifMatchRegionMatch93 faldo:begin ?targetMotifMatchRegionMatchBeginMF_0167594 .
?targetMotifMatchRegionMatchBeginMF_0167594 faldo:position ?targetMotifMatchRegionMatchBeginPositionMF_0167587 ;
faldo:reference ?thisSequence .
?targetMotifSequenceAlignmentOperationMF_0167595 edam:has_input signature:MF_01675 ;
rdf:type edam:operation_0300 .
BIND(STRLEN(REPLACE(SUBSTR(?templateMotifCigarO30207MF_0167584, 1, (STRLEN(?templateMotifCigarO30207MF_0167584) - STRLEN(REPLACE(?templateMotifCigarO30207MF_0167584, CONCAT('^(?:-*[^-]){', STR(((209 - ?templateMotifSequenceMatchBeginPositionO3020785) + 1)), '}'), '')))), '[a-z]', '')) AS ?step196) .
BIND((STRLEN(SUBSTR(?targetMotifMatchCigarO30207MF_0167586, 1, (STRLEN(?targetMotifMatchCigarO30207MF_0167586) - STRLEN(REPLACE(?targetMotifMatchCigarO30207MF_0167586, CONCAT('^(?:[a-z]*(?:[A-Z]|-)){', STR(?step196), '}'), ''))))) - STRLEN(REPLACE(SUBSTR(?targetMotifMatchCigarO30207MF_0167586, 1, (STRLEN(?targetMotifMatchCigarO30207MF_0167586) - STRLEN(REPLACE(?targetMotifMatchCigarO30207MF_0167586, CONCAT('^(?:[a-z]*(?:[A-Z]|-)){', STR(?step196), '}'), '')))), '[^-]', ''))) AS ?step297) .
BIND(((?step297 + ?targetMotifMatchRegionMatchBeginPositionMF_0167587) - 1) AS ?thisPositionOn33) .
BIND(?thisPositionOn33 AS ?thisPositionOn34) .
BIND(?this AS ?pfs1t98) .
BIND(URI(CONCAT(STR(?thisSequence), '#position', STR(?thisPositionOn33))) AS ?pfsb31) .
BIND(URI(CONCAT(STR(?thisSequence), '#position', STR(?thisPositionOn34))) AS ?pfse32) .
FILTER ((SUBSTR(?thisSequenceValue, ?thisPositionOn33, 1) = 'K')) .
BIND(URI(CONCAT(STR(?this), '#MF_01675a30')) AS ?annotation30) .
BIND(?this AS ?pfs29) .
}
}
"xsd:string |
